HEADER TRANSFERASE 21-MAR-17 5NH2 TITLE BARTONELLA HENSELAE BEPA FIC DOMAIN IN COMPLEX WITH ITS ANTITOXIN TITLE 2 HOMOLOGUE BIAA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AMPYLATOR; COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE STR. HOUSTON-1; SOURCE 3 ORGANISM_TAXID: 283166; SOURCE 4 GENE: BEPA, BH13370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE STR. HOUSTON-1; SOURCE 10 ORGANISM_TAXID: 283166; SOURCE 11 GENE: BH13360; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: AI KEYWDS FIC DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.DIETZ,T.SCHIRMER REVDAT 3 17-JAN-24 5NH2 1 REMARK REVDAT 2 16-OCT-19 5NH2 1 REMARK REVDAT 1 16-MAY-18 5NH2 0 JRNL AUTH N.DIETZ,T.SCHIRMER JRNL TITL BARTONELLA HENSELAE BEPA FIC DOMAIN IN COMPLEX WITH ITS JRNL TITL 2 ANTITOXIN HOMOLOGUE BIAA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 15699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1570 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3825 - 5.1584 1.00 1467 163 0.1798 0.2316 REMARK 3 2 5.1584 - 4.0954 1.00 1381 154 0.1391 0.2180 REMARK 3 3 4.0954 - 3.5780 0.99 1375 152 0.1621 0.2480 REMARK 3 4 3.5780 - 3.2509 0.98 1332 148 0.1800 0.2527 REMARK 3 5 3.2509 - 3.0180 0.97 1313 147 0.1988 0.2914 REMARK 3 6 3.0180 - 2.8401 0.97 1281 141 0.1979 0.2650 REMARK 3 7 2.8401 - 2.6979 0.93 1271 141 0.2055 0.3599 REMARK 3 8 2.6979 - 2.5805 0.92 1223 137 0.2055 0.3407 REMARK 3 9 2.5805 - 2.4811 0.90 1208 133 0.2190 0.3431 REMARK 3 10 2.4811 - 2.3955 0.89 1170 131 0.2131 0.3005 REMARK 3 11 2.3955 - 2.3206 0.83 1108 123 0.2226 0.3269 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2813 REMARK 3 ANGLE : 1.234 3796 REMARK 3 CHIRALITY : 0.066 415 REMARK 3 PLANARITY : 0.009 497 REMARK 3 DIHEDRAL : 17.086 1701 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2259 19.8059 32.1878 REMARK 3 T TENSOR REMARK 3 T11: 0.2450 T22: 0.2588 REMARK 3 T33: 0.3976 T12: 0.0211 REMARK 3 T13: -0.0017 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 3.4617 L22: 2.1327 REMARK 3 L33: 4.6140 L12: -0.9480 REMARK 3 L13: -1.5248 L23: 0.4309 REMARK 3 S TENSOR REMARK 3 S11: 0.1042 S12: 0.2597 S13: 0.3408 REMARK 3 S21: -0.1525 S22: 0.0788 S23: 0.0166 REMARK 3 S31: -0.5350 S32: -0.7472 S33: -0.0623 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5827 8.6112 37.4613 REMARK 3 T TENSOR REMARK 3 T11: 0.3002 T22: 0.2620 REMARK 3 T33: 0.3493 T12: -0.0829 REMARK 3 T13: 0.0661 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 2.4334 L22: 1.6162 REMARK 3 L33: 4.9319 L12: -0.8342 REMARK 3 L13: -0.2686 L23: 1.2857 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: 0.0943 S13: -0.3784 REMARK 3 S21: 0.1476 S22: -0.0323 S23: 0.2474 REMARK 3 S31: 0.3871 S32: -0.2668 S33: -0.0155 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8593 20.6292 30.2900 REMARK 3 T TENSOR REMARK 3 T11: 0.4720 T22: 0.2722 REMARK 3 T33: 0.5085 T12: -0.0372 REMARK 3 T13: 0.0857 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 3.0545 L22: 2.7404 REMARK 3 L33: 2.6380 L12: -1.7385 REMARK 3 L13: -1.5718 L23: -0.9158 REMARK 3 S TENSOR REMARK 3 S11: -0.1844 S12: -0.0559 S13: 0.4985 REMARK 3 S21: -0.0873 S22: 0.0175 S23: -0.4208 REMARK 3 S31: -0.6860 S32: 0.2215 S33: -0.2047 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6501 10.1248 48.7324 REMARK 3 T TENSOR REMARK 3 T11: 0.2938 T22: 0.3244 REMARK 3 T33: 0.4180 T12: 0.0655 REMARK 3 T13: 0.0062 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.8973 L22: 2.9801 REMARK 3 L33: 5.4817 L12: -0.1040 REMARK 3 L13: -0.1563 L23: 1.8706 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0597 S13: -0.2387 REMARK 3 S21: 0.3482 S22: 0.2573 S23: -0.1687 REMARK 3 S31: 0.4710 S32: 0.4539 S33: -0.0459 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7263 23.8988 52.8362 REMARK 3 T TENSOR REMARK 3 T11: 0.2429 T22: 0.3356 REMARK 3 T33: 0.2578 T12: 0.0135 REMARK 3 T13: 0.0441 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.1977 L22: 2.8821 REMARK 3 L33: 2.9891 L12: 0.6242 REMARK 3 L13: -0.3626 L23: 0.8805 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: -0.1839 S13: -0.0203 REMARK 3 S21: 0.2386 S22: -0.1113 S23: 0.0359 REMARK 3 S31: -0.0968 S32: -0.0196 S33: 0.0526 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6614 37.7027 60.1388 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.3724 REMARK 3 T33: 0.4022 T12: -0.0248 REMARK 3 T13: 0.0724 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.0999 L22: 3.6102 REMARK 3 L33: 4.5529 L12: 1.2000 REMARK 3 L13: -0.1333 L23: 1.8435 REMARK 3 S TENSOR REMARK 3 S11: -0.1909 S12: -0.1345 S13: 0.1969 REMARK 3 S21: 0.6689 S22: 0.0476 S23: 0.0806 REMARK 3 S31: -1.3051 S32: 0.3567 S33: -0.0080 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5328 38.3348 64.0013 REMARK 3 T TENSOR REMARK 3 T11: 0.6245 T22: 0.4044 REMARK 3 T33: 0.3863 T12: -0.0337 REMARK 3 T13: 0.0307 T23: -0.0895 REMARK 3 L TENSOR REMARK 3 L11: 3.5991 L22: 3.9102 REMARK 3 L33: 7.0065 L12: 0.2328 REMARK 3 L13: -1.3775 L23: 0.6252 REMARK 3 S TENSOR REMARK 3 S11: 0.5400 S12: -0.5804 S13: 0.4163 REMARK 3 S21: 0.8016 S22: -0.0380 S23: 0.5285 REMARK 3 S31: -1.2784 S32: 0.0013 S33: -0.0818 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 282 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5314 43.5733 71.9445 REMARK 3 T TENSOR REMARK 3 T11: 1.1951 T22: 0.5812 REMARK 3 T33: 0.5178 T12: -0.0515 REMARK 3 T13: -0.0620 T23: -0.1235 REMARK 3 L TENSOR REMARK 3 L11: 2.4532 L22: 1.2397 REMARK 3 L33: 3.7215 L12: 0.4727 REMARK 3 L13: -0.5217 L23: 1.5287 REMARK 3 S TENSOR REMARK 3 S11: 0.1810 S12: -0.8575 S13: 0.2486 REMARK 3 S21: 1.5066 S22: 0.0053 S23: 0.1328 REMARK 3 S31: -1.0365 S32: 0.0239 S33: -0.1031 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4703 21.5550 54.9682 REMARK 3 T TENSOR REMARK 3 T11: 0.4173 T22: 0.3756 REMARK 3 T33: 0.3127 T12: -0.1296 REMARK 3 T13: -0.0216 T23: -0.0699 REMARK 3 L TENSOR REMARK 3 L11: 5.4036 L22: 3.2913 REMARK 3 L33: 2.7462 L12: 2.4573 REMARK 3 L13: -3.8629 L23: -1.8599 REMARK 3 S TENSOR REMARK 3 S11: 0.3459 S12: -0.7136 S13: 0.1144 REMARK 3 S21: 0.5697 S22: -0.4159 S23: -0.1808 REMARK 3 S31: 0.3521 S32: 0.4011 S33: 0.1266 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5911 25.1518 49.2233 REMARK 3 T TENSOR REMARK 3 T11: 0.2953 T22: 0.3435 REMARK 3 T33: 0.3891 T12: -0.0321 REMARK 3 T13: 0.1491 T23: -0.1078 REMARK 3 L TENSOR REMARK 3 L11: 5.6046 L22: 5.6181 REMARK 3 L33: 3.1716 L12: 1.0760 REMARK 3 L13: -0.5997 L23: -0.3776 REMARK 3 S TENSOR REMARK 3 S11: 0.1733 S12: -0.6171 S13: 0.5765 REMARK 3 S21: 0.7687 S22: -0.4879 S23: 1.0590 REMARK 3 S31: -0.0372 S32: -0.2692 S33: 0.1452 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4794 18.1340 44.2345 REMARK 3 T TENSOR REMARK 3 T11: 0.2736 T22: 0.5028 REMARK 3 T33: 0.4402 T12: 0.0268 REMARK 3 T13: 0.0481 T23: -0.1336 REMARK 3 L TENSOR REMARK 3 L11: 8.2437 L22: 8.7288 REMARK 3 L33: 6.1202 L12: -0.1555 REMARK 3 L13: 1.2309 L23: -1.3101 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: 0.7226 S13: -0.1681 REMARK 3 S21: -0.0402 S22: -0.1449 S23: 0.5387 REMARK 3 S31: 0.5329 S32: -0.7330 S33: 0.1889 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200004102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : Q REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15699 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.321 REMARK 200 RESOLUTION RANGE LOW (A) : 43.375 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2VZA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M DI-SODIUM MALONATE, 20% W/V REMARK 280 PEG3350, PH 7.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.01700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.29950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.07600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.29950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.01700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.07600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 9 REMARK 465 ASN A 10 REMARK 465 THR A 11 REMARK 465 GLU A 12 REMARK 465 ILE A 13 REMARK 465 ALA A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 THR B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 ASN B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 SER B 12 REMARK 465 ILE B 13 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 288 CG CD CE NZ REMARK 480 LYS A 291 CG CD CE NZ REMARK 480 LYS A 295 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 106 O HOH A 601 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 170 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 141.10 -171.95 REMARK 500 TRP A 109 -158.43 -92.01 REMARK 500 LYS A 110 -155.58 -73.86 REMARK 500 ALA A 112 -153.88 62.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 52 GLY B 53 -42.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 500 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 163 OE2 REMARK 620 2 HOH B 104 O 159.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 500 DBREF 5NH2 A 10 303 UNP Q6G2A9 BEPA_BARHE 10 303 DBREF1 5NH2 B 3 69 UNP A0A0H3LZG7_BARHE DBREF2 5NH2 B A0A0H3LZG7 2 68 SEQADV 5NH2 MET A 9 UNP Q6G2A9 INITIATING METHIONINE SEQADV 5NH2 HIS A 304 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 HIS A 305 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 HIS A 306 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 HIS A 307 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 HIS A 308 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 HIS A 309 UNP Q6G2A9 EXPRESSION TAG SEQADV 5NH2 MET B 1 UNP A0A0H3LZG INITIATING METHIONINE SEQADV 5NH2 VAL B 2 UNP A0A0H3LZG EXPRESSION TAG SEQRES 1 A 301 MET ASN THR GLU ILE ILE SER PRO HIS HIS TYR VAL TYR SEQRES 2 A 301 PRO ASN THR THR THR LEU LYS ASN LYS TYR GLY ILE LYS SEQRES 3 A 301 ASN LEU ASN ALA PHE LEU GLU LYS CYS SER HIS ASP THR SEQRES 4 A 301 ALA LYS ALA MET ILE ASN LEU ARG GLU GLU SER LEU PRO SEQRES 5 A 301 GLU TYR PHE ASP THR ALA TYR LEU CYS HIS ILE HIS GLN SEQRES 6 A 301 GLN LEU PHE LYS ASN THR PHE GLU TRP ALA GLY TYR LEU SEQRES 7 A 301 ARG HIS ILE PRO PHE THR PHE ALA ASP GLY THR THR ALA SEQRES 8 A 301 ALA MET PRO GLU MET LYS ARG THR GLY TRP LYS ASN ALA SEQRES 9 A 301 PHE ALA ILE GLY ASP GLU ILE GLN GLU GLY LEU GLN ARG SEQRES 10 A 301 LEU ASP GLN THR LEU ALA GLU LYS ASN ASN LEU GLN GLY SEQRES 11 A 301 LEU THR ARG GLU GLU PHE ASN SER GLU ALA ILE GLU LEU SEQRES 12 A 301 PHE ASN SER LEU ASN GLN LEU HIS PRO PHE ARG GLU GLY SEQRES 13 A 301 ASN GLY ARG THR GLN ARG LEU PHE PHE GLU ASN LEU ALA SEQRES 14 A 301 LYS ALA ALA GLY HIS GLN LEU ASN PHE SER LEU ILE THR SEQRES 15 A 301 LYS GLU ARG MET MET VAL ALA SER VAL ALA VAL ALA GLU SEQRES 16 A 301 ASN GLY ASP LEU GLU PRO MET GLN HIS LEU PHE GLU ASP SEQRES 17 A 301 ILE SER ASN PRO GLU LYS ILE ARG LEU LEU LYS GLU PHE SEQRES 18 A 301 MET HIS THR MET LYS ASN THR GLY ARG ASN VAL ASN ASP SEQRES 19 A 301 ARG PRO VAL MET VAL ALA LYS GLU GLY GLU THR TYR THR SEQRES 20 A 301 GLY THR TYR ARG GLY ALA GLY LEU GLU GLY PHE ALA LEU SEQRES 21 A 301 ASN VAL LYS GLY ALA TYR ILE ILE GLY ASN ILE ASP HIS SEQRES 22 A 301 LEU PRO PRO GLU GLN LEU LYS ILE LEU LYS PRO GLY ASP SEQRES 23 A 301 LYS ILE THR PHE THR ALA PRO LYS ALA HIS HIS HIS HIS SEQRES 24 A 301 HIS HIS SEQRES 1 B 69 MET VAL THR VAL GLU ALA THR GLU ASN LEU LEU SER ILE SEQRES 2 B 69 THR LEU GLU GLU LEU LYS LYS ARG ARG GLU ALA VAL ASP SEQRES 3 B 69 ALA VAL ILE SER THR HIS ALA LEU GLU GLY ILE ALA LEU SEQRES 4 B 69 HIS PRO LYS THR LEU LYS ILE LEU GLU GLY TYR ALA ARG SEQRES 5 B 69 GLY ASN THR SER LEU GLU GLU PHE ASN THR LEU MET ASP SEQRES 6 B 69 ASN ALA LYS LEU HET MG A 500 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG MG 2+ FORMUL 4 HOH *105(H2 O) HELIX 1 AA1 SER A 15 VAL A 20 5 6 HELIX 2 AA2 ASN A 35 ARG A 55 1 21 HELIX 3 AA3 ASP A 64 LYS A 77 1 14 HELIX 4 AA4 GLY A 116 LYS A 133 1 18 HELIX 5 AA5 ASN A 134 GLN A 137 5 4 HELIX 6 AA6 THR A 140 HIS A 159 1 20 HELIX 7 AA7 GLY A 164 ALA A 180 1 17 HELIX 8 AA8 ASN A 185 ILE A 189 5 5 HELIX 9 AA9 THR A 190 GLY A 205 1 16 HELIX 10 AB1 LEU A 207 ILE A 217 1 11 HELIX 11 AB2 ASN A 219 THR A 236 1 18 HELIX 12 AB3 ASP A 280 LEU A 282 5 3 HELIX 13 AB4 PRO A 283 LYS A 288 1 6 HELIX 14 AB5 LEU B 15 LEU B 34 1 20 HELIX 15 AB6 HIS B 40 ARG B 52 1 13 HELIX 16 AB7 SER B 56 ALA B 67 1 12 SHEET 1 AA1 2 PHE A 91 THR A 92 0 SHEET 2 AA1 2 THR A 98 ALA A 99 -1 O ALA A 99 N PHE A 91 SHEET 1 AA2 5 VAL A 245 VAL A 247 0 SHEET 2 AA2 5 ALA A 273 ASN A 278 1 O ILE A 276 N MET A 246 SHEET 3 AA2 5 GLY A 265 VAL A 270 -1 N PHE A 266 O GLY A 277 SHEET 4 AA2 5 THR A 253 ALA A 261 -1 N ARG A 259 O ALA A 267 SHEET 5 AA2 5 LYS A 295 THR A 299 -1 O ILE A 296 N GLY A 256 LINK OE2 GLU A 163 MG MG A 500 1555 1555 2.43 LINK MG MG A 500 O HOH B 104 1555 1555 2.79 SITE 1 AC1 4 GLU A 163 GLY A 164 ARG A 167 HOH B 104 CRYST1 48.034 56.152 136.599 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017809 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007321 0.00000