HEADER ISOMERASE 21-MAR-17 5NH9 TITLE CRYSTAL STRUCTURE OF XYLOSE ISOMERASE FROM PIROMYCES E2 IN COMPLEX TITLE 2 WITH TWO MN2+ IONS AND XYLOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 5.3.1.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PIROMYCES SP. E2; SOURCE 3 ORGANISM_TAXID: 73868; SOURCE 4 ATCC: 76762; SOURCE 5 GENE: XYLA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: TOP10 OR NEB10-BETA; SOURCE 9 EXPRESSION_SYSTEM_ATCC_NUMBER: 10798; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS ISOMERASE, TIM-BARREL EXPDTA X-RAY DIFFRACTION AUTHOR H.J.ROZEBOOM,D.B.JANSSEN REVDAT 6 01-MAY-24 5NH9 1 HETSYN REVDAT 5 29-JUL-20 5NH9 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 29-AUG-18 5NH9 1 REMARK REVDAT 3 22-NOV-17 5NH9 1 JRNL REVDAT 2 15-NOV-17 5NH9 1 JRNL REVDAT 1 01-NOV-17 5NH9 0 JRNL AUTH M.LEE,H.J.ROZEBOOM,P.P.DE WAAL,R.M.DE JONG,H.M.DUDEK, JRNL AUTH 2 D.B.JANSSEN JRNL TITL METAL DEPENDENCE OF THE XYLOSE ISOMERASE FROM PIROMYCES SP. JRNL TITL 2 E2 EXPLORED BY ACTIVITY PROFILING AND PROTEIN JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF BIOCHEMISTRY V. 56 5991 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 29045784 JRNL DOI 10.1021/ACS.BIOCHEM.7B00777 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 93209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4877 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6089 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 321 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13876 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 1522 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 1.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : -0.09000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.02000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.257 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.183 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 14340 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 13324 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19314 ; 1.368 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 30792 ; 1.010 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1748 ; 5.759 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 708 ;37.079 ;25.141 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2532 ;13.643 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;13.316 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2019 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 16296 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 3316 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6980 ; 0.698 ; 0.978 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6979 ; 0.697 ; 0.978 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8720 ; 1.183 ; 1.463 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 8721 ; 1.183 ; 1.463 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7360 ; 1.136 ; 1.131 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 7348 ; 1.129 ; 1.126 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 10573 ; 1.815 ; 1.633 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18321 ; 4.531 ; 8.789 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 17573 ; 4.258 ; 8.313 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 437 B 2 437 26863 0.06 0.05 REMARK 3 2 A 2 437 C 2 437 26890 0.05 0.05 REMARK 3 3 A 2 437 D 2 437 26830 0.06 0.05 REMARK 3 4 B 2 437 C 2 437 26886 0.06 0.05 REMARK 3 5 B 2 437 D 2 437 26941 0.05 0.05 REMARK 3 6 C 2 437 D 2 437 26881 0.05 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 437 REMARK 3 ORIGIN FOR THE GROUP (A): -9.8000 -2.6760 60.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.0686 REMARK 3 T33: 0.0185 T12: 0.0297 REMARK 3 T13: 0.0273 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.2763 L22: 0.2953 REMARK 3 L33: 0.4224 L12: -0.0006 REMARK 3 L13: 0.0137 L23: -0.0481 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: -0.0788 S13: 0.0253 REMARK 3 S21: 0.0729 S22: 0.0036 S23: 0.0630 REMARK 3 S31: -0.0349 S32: -0.0704 S33: -0.0231 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 437 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0620 9.2940 32.4530 REMARK 3 T TENSOR REMARK 3 T11: 0.0530 T22: 0.0398 REMARK 3 T33: 0.0216 T12: 0.0182 REMARK 3 T13: 0.0154 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.4006 L22: 0.2465 REMARK 3 L33: 0.3847 L12: -0.0782 REMARK 3 L13: -0.0298 L23: -0.0030 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: 0.0636 S13: 0.0765 REMARK 3 S21: -0.0254 S22: 0.0027 S23: -0.0078 REMARK 3 S31: -0.0884 S32: 0.0162 S33: -0.0271 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 437 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2780 -28.0370 36.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.0476 T22: 0.0337 REMARK 3 T33: 0.0182 T12: 0.0119 REMARK 3 T13: -0.0119 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.3619 L22: 0.2776 REMARK 3 L33: 0.3898 L12: -0.0669 REMARK 3 L13: 0.0343 L23: -0.0176 REMARK 3 S TENSOR REMARK 3 S11: 0.0146 S12: 0.0384 S13: -0.0743 REMARK 3 S21: -0.0200 S22: 0.0066 S23: 0.0327 REMARK 3 S31: 0.0731 S32: -0.0189 S33: -0.0212 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 437 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8440 -12.9210 57.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.0389 T22: 0.0673 REMARK 3 T33: 0.0085 T12: 0.0248 REMARK 3 T13: -0.0123 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.2858 L22: 0.2844 REMARK 3 L33: 0.4082 L12: 0.0121 REMARK 3 L13: 0.0368 L23: 0.0363 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: -0.0566 S13: -0.0133 REMARK 3 S21: 0.0579 S22: 0.0242 S23: -0.0377 REMARK 3 S31: 0.0180 S32: 0.0845 S33: -0.0293 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5NH9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200004116. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5148 REMARK 200 MONOCHROMATOR : HELIOS MX MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98185 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 46.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: D_1200004044 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13-15 % PEG3350, 10 MM MNCL2, 0.1 M REMARK 280 HEPES PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 35520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -239.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 873 O HOH B 931 2.12 REMARK 500 O HOH D 912 O HOH D 917 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 308 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 MET A 435 CG - SD - CE ANGL. DEV. = 12.4 DEGREES REMARK 500 ASP B 308 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ARG C 222 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP C 308 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP C 308 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP D 308 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 59 -168.68 -128.90 REMARK 500 ALA A 155 -96.22 -104.55 REMARK 500 GLU A 238 102.59 79.52 REMARK 500 ASN A 299 -164.64 -160.39 REMARK 500 ILE A 314 -25.00 -149.77 REMARK 500 VAL A 333 -63.01 -96.30 REMARK 500 GLU B 4 135.30 -39.03 REMARK 500 ASP B 59 -167.59 -129.73 REMARK 500 ALA B 155 -95.18 -105.17 REMARK 500 GLU B 238 102.21 82.07 REMARK 500 ILE B 314 -25.49 -150.67 REMARK 500 VAL B 333 -64.15 -95.61 REMARK 500 ASP C 59 -168.52 -129.00 REMARK 500 ALA C 155 -94.64 -103.00 REMARK 500 GLU C 238 104.25 80.17 REMARK 500 ILE C 314 -24.34 -148.59 REMARK 500 VAL C 333 -63.94 -96.92 REMARK 500 ALA D 155 -93.20 -103.97 REMARK 500 GLU D 238 104.72 81.00 REMARK 500 ILE D 314 -24.97 -147.08 REMARK 500 VAL D 333 -62.94 -95.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 966 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH D 967 DISTANCE = 6.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 233 OE2 REMARK 620 2 GLU A 269 OE1 92.2 REMARK 620 3 ASP A 297 OD2 97.8 108.2 REMARK 620 4 ASP A 340 OD2 164.3 86.0 97.5 REMARK 620 5 XLS A 503 O4 84.9 164.0 87.8 92.5 REMARK 620 6 XLS A 503 O2 85.9 76.5 173.7 78.5 87.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 269 OE2 REMARK 620 2 HIS A 272 NE2 83.7 REMARK 620 3 ASP A 308 OD2 95.2 101.2 REMARK 620 4 XLS A 503 O2 105.7 82.1 159.2 REMARK 620 5 HOH A 702 O 101.8 149.5 108.1 67.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 233 OE2 REMARK 620 2 GLU B 269 OE1 92.6 REMARK 620 3 ASP B 297 OD2 101.3 109.3 REMARK 620 4 ASP B 340 OD2 162.4 84.3 96.0 REMARK 620 5 XLS B 503 O2 85.0 75.3 171.8 77.4 REMARK 620 6 XLS B 503 O4 88.1 163.2 87.0 90.0 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 269 OE2 REMARK 620 2 HIS B 272 NE2 85.5 REMARK 620 3 ASP B 308 OD2 95.2 101.6 REMARK 620 4 XLS B 503 O2 103.8 83.2 160.8 REMARK 620 5 HOH B 719 O 102.8 150.0 106.2 66.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 233 OE2 REMARK 620 2 GLU C 269 OE1 92.2 REMARK 620 3 ASP C 297 OD2 97.6 108.9 REMARK 620 4 ASP C 340 OD2 165.4 87.3 96.4 REMARK 620 5 XLS C 504 O4 89.0 171.0 79.7 89.3 REMARK 620 6 XLS C 504 O2 88.1 77.4 171.2 77.6 93.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 269 OE2 REMARK 620 2 HIS C 272 NE2 83.0 REMARK 620 3 ASP C 308 OD2 89.0 99.2 REMARK 620 4 XLS C 504 O2 107.6 88.3 162.6 REMARK 620 5 HOH C 623 O 102.6 167.7 91.9 79.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 233 OE2 REMARK 620 2 GLU D 269 OE1 93.5 REMARK 620 3 ASP D 297 OD2 100.6 108.6 REMARK 620 4 ASP D 340 OD2 163.1 83.6 96.0 REMARK 620 5 XLS D 504 O2 91.3 76.9 166.4 71.9 REMARK 620 6 XLS D 504 O4 89.1 163.1 87.3 89.1 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 269 OE2 REMARK 620 2 HIS D 272 NE2 81.1 REMARK 620 3 ASP D 308 OD2 91.0 99.4 REMARK 620 4 XLS D 504 O1 166.1 86.8 97.6 REMARK 620 5 XLS D 504 O2 106.4 88.0 162.1 66.3 REMARK 620 6 HOH D 711 O 94.5 154.8 105.6 93.6 69.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5NH5 RELATED DB: PDB DBREF 5NH9 A 1 437 UNP Q9P8C9 Q9P8C9_PIRSE 1 437 DBREF 5NH9 B 1 437 UNP Q9P8C9 Q9P8C9_PIRSE 1 437 DBREF 5NH9 C 1 437 UNP Q9P8C9 Q9P8C9_PIRSE 1 437 DBREF 5NH9 D 1 437 UNP Q9P8C9 Q9P8C9_PIRSE 1 437 SEQRES 1 A 437 MET ALA LYS GLU TYR PHE PRO GLN ILE GLN LYS ILE LYS SEQRES 2 A 437 PHE GLU GLY LYS ASP SER LYS ASN PRO LEU ALA PHE HIS SEQRES 3 A 437 TYR TYR ASP ALA GLU LYS GLU VAL MET GLY LYS LYS MET SEQRES 4 A 437 LYS ASP TRP LEU ARG PHE ALA MET ALA TRP TRP HIS THR SEQRES 5 A 437 LEU CYS ALA GLU GLY ALA ASP GLN PHE GLY GLY GLY THR SEQRES 6 A 437 LYS SER PHE PRO TRP ASN GLU GLY THR ASP ALA ILE GLU SEQRES 7 A 437 ILE ALA LYS GLN LYS VAL ASP ALA GLY PHE GLU ILE MET SEQRES 8 A 437 GLN LYS LEU GLY ILE PRO TYR TYR CYS PHE HIS ASP VAL SEQRES 9 A 437 ASP LEU VAL SER GLU GLY ASN SER ILE GLU GLU TYR GLU SEQRES 10 A 437 SER ASN LEU LYS ALA VAL VAL ALA TYR LEU LYS GLU LYS SEQRES 11 A 437 GLN LYS GLU THR GLY ILE LYS LEU LEU TRP SER THR ALA SEQRES 12 A 437 ASN VAL PHE GLY HIS LYS ARG TYR MET ASN GLY ALA SER SEQRES 13 A 437 THR ASN PRO ASP PHE ASP VAL VAL ALA ARG ALA ILE VAL SEQRES 14 A 437 GLN ILE LYS ASN ALA ILE ASP ALA GLY ILE GLU LEU GLY SEQRES 15 A 437 ALA GLU ASN TYR VAL PHE TRP GLY GLY ARG GLU GLY TYR SEQRES 16 A 437 MET SER LEU LEU ASN THR ASP GLN LYS ARG GLU LYS GLU SEQRES 17 A 437 HIS MET ALA THR MET LEU THR MET ALA ARG ASP TYR ALA SEQRES 18 A 437 ARG SER LYS GLY PHE LYS GLY THR PHE LEU ILE GLU PRO SEQRES 19 A 437 LYS PRO MET GLU PRO THR LYS HIS GLN TYR ASP VAL ASP SEQRES 20 A 437 THR GLU THR ALA ILE GLY PHE LEU LYS ALA HIS ASN LEU SEQRES 21 A 437 ASP LYS ASP PHE LYS VAL ASN ILE GLU VAL ASN HIS ALA SEQRES 22 A 437 THR LEU ALA GLY HIS THR PHE GLU HIS GLU LEU ALA CYS SEQRES 23 A 437 ALA VAL ASP ALA GLY MET LEU GLY SER ILE ASP ALA ASN SEQRES 24 A 437 ARG GLY ASP TYR GLN ASN GLY TRP ASP THR ASP GLN PHE SEQRES 25 A 437 PRO ILE ASP GLN TYR GLU LEU VAL GLN ALA TRP MET GLU SEQRES 26 A 437 ILE ILE ARG GLY GLY GLY PHE VAL THR GLY GLY THR ASN SEQRES 27 A 437 PHE ASP ALA LYS THR ARG ARG ASN SER THR ASP LEU GLU SEQRES 28 A 437 ASP ILE ILE ILE ALA HIS VAL SER GLY MET ASP ALA MET SEQRES 29 A 437 ALA ARG ALA LEU GLU ASN ALA ALA LYS LEU LEU GLN GLU SEQRES 30 A 437 SER PRO TYR THR LYS MET LYS LYS GLU ARG TYR ALA SER SEQRES 31 A 437 PHE ASP SER GLY ILE GLY LYS ASP PHE GLU ASP GLY LYS SEQRES 32 A 437 LEU THR LEU GLU GLN VAL TYR GLU TYR GLY LYS LYS ASN SEQRES 33 A 437 GLY GLU PRO LYS GLN THR SER GLY LYS GLN GLU LEU TYR SEQRES 34 A 437 GLU ALA ILE VAL ALA MET TYR GLN SEQRES 1 B 437 MET ALA LYS GLU TYR PHE PRO GLN ILE GLN LYS ILE LYS SEQRES 2 B 437 PHE GLU GLY LYS ASP SER LYS ASN PRO LEU ALA PHE HIS SEQRES 3 B 437 TYR TYR ASP ALA GLU LYS GLU VAL MET GLY LYS LYS MET SEQRES 4 B 437 LYS ASP TRP LEU ARG PHE ALA MET ALA TRP TRP HIS THR SEQRES 5 B 437 LEU CYS ALA GLU GLY ALA ASP GLN PHE GLY GLY GLY THR SEQRES 6 B 437 LYS SER PHE PRO TRP ASN GLU GLY THR ASP ALA ILE GLU SEQRES 7 B 437 ILE ALA LYS GLN LYS VAL ASP ALA GLY PHE GLU ILE MET SEQRES 8 B 437 GLN LYS LEU GLY ILE PRO TYR TYR CYS PHE HIS ASP VAL SEQRES 9 B 437 ASP LEU VAL SER GLU GLY ASN SER ILE GLU GLU TYR GLU SEQRES 10 B 437 SER ASN LEU LYS ALA VAL VAL ALA TYR LEU LYS GLU LYS SEQRES 11 B 437 GLN LYS GLU THR GLY ILE LYS LEU LEU TRP SER THR ALA SEQRES 12 B 437 ASN VAL PHE GLY HIS LYS ARG TYR MET ASN GLY ALA SER SEQRES 13 B 437 THR ASN PRO ASP PHE ASP VAL VAL ALA ARG ALA ILE VAL SEQRES 14 B 437 GLN ILE LYS ASN ALA ILE ASP ALA GLY ILE GLU LEU GLY SEQRES 15 B 437 ALA GLU ASN TYR VAL PHE TRP GLY GLY ARG GLU GLY TYR SEQRES 16 B 437 MET SER LEU LEU ASN THR ASP GLN LYS ARG GLU LYS GLU SEQRES 17 B 437 HIS MET ALA THR MET LEU THR MET ALA ARG ASP TYR ALA SEQRES 18 B 437 ARG SER LYS GLY PHE LYS GLY THR PHE LEU ILE GLU PRO SEQRES 19 B 437 LYS PRO MET GLU PRO THR LYS HIS GLN TYR ASP VAL ASP SEQRES 20 B 437 THR GLU THR ALA ILE GLY PHE LEU LYS ALA HIS ASN LEU SEQRES 21 B 437 ASP LYS ASP PHE LYS VAL ASN ILE GLU VAL ASN HIS ALA SEQRES 22 B 437 THR LEU ALA GLY HIS THR PHE GLU HIS GLU LEU ALA CYS SEQRES 23 B 437 ALA VAL ASP ALA GLY MET LEU GLY SER ILE ASP ALA ASN SEQRES 24 B 437 ARG GLY ASP TYR GLN ASN GLY TRP ASP THR ASP GLN PHE SEQRES 25 B 437 PRO ILE ASP GLN TYR GLU LEU VAL GLN ALA TRP MET GLU SEQRES 26 B 437 ILE ILE ARG GLY GLY GLY PHE VAL THR GLY GLY THR ASN SEQRES 27 B 437 PHE ASP ALA LYS THR ARG ARG ASN SER THR ASP LEU GLU SEQRES 28 B 437 ASP ILE ILE ILE ALA HIS VAL SER GLY MET ASP ALA MET SEQRES 29 B 437 ALA ARG ALA LEU GLU ASN ALA ALA LYS LEU LEU GLN GLU SEQRES 30 B 437 SER PRO TYR THR LYS MET LYS LYS GLU ARG TYR ALA SER SEQRES 31 B 437 PHE ASP SER GLY ILE GLY LYS ASP PHE GLU ASP GLY LYS SEQRES 32 B 437 LEU THR LEU GLU GLN VAL TYR GLU TYR GLY LYS LYS ASN SEQRES 33 B 437 GLY GLU PRO LYS GLN THR SER GLY LYS GLN GLU LEU TYR SEQRES 34 B 437 GLU ALA ILE VAL ALA MET TYR GLN SEQRES 1 C 437 MET ALA LYS GLU TYR PHE PRO GLN ILE GLN LYS ILE LYS SEQRES 2 C 437 PHE GLU GLY LYS ASP SER LYS ASN PRO LEU ALA PHE HIS SEQRES 3 C 437 TYR TYR ASP ALA GLU LYS GLU VAL MET GLY LYS LYS MET SEQRES 4 C 437 LYS ASP TRP LEU ARG PHE ALA MET ALA TRP TRP HIS THR SEQRES 5 C 437 LEU CYS ALA GLU GLY ALA ASP GLN PHE GLY GLY GLY THR SEQRES 6 C 437 LYS SER PHE PRO TRP ASN GLU GLY THR ASP ALA ILE GLU SEQRES 7 C 437 ILE ALA LYS GLN LYS VAL ASP ALA GLY PHE GLU ILE MET SEQRES 8 C 437 GLN LYS LEU GLY ILE PRO TYR TYR CYS PHE HIS ASP VAL SEQRES 9 C 437 ASP LEU VAL SER GLU GLY ASN SER ILE GLU GLU TYR GLU SEQRES 10 C 437 SER ASN LEU LYS ALA VAL VAL ALA TYR LEU LYS GLU LYS SEQRES 11 C 437 GLN LYS GLU THR GLY ILE LYS LEU LEU TRP SER THR ALA SEQRES 12 C 437 ASN VAL PHE GLY HIS LYS ARG TYR MET ASN GLY ALA SER SEQRES 13 C 437 THR ASN PRO ASP PHE ASP VAL VAL ALA ARG ALA ILE VAL SEQRES 14 C 437 GLN ILE LYS ASN ALA ILE ASP ALA GLY ILE GLU LEU GLY SEQRES 15 C 437 ALA GLU ASN TYR VAL PHE TRP GLY GLY ARG GLU GLY TYR SEQRES 16 C 437 MET SER LEU LEU ASN THR ASP GLN LYS ARG GLU LYS GLU SEQRES 17 C 437 HIS MET ALA THR MET LEU THR MET ALA ARG ASP TYR ALA SEQRES 18 C 437 ARG SER LYS GLY PHE LYS GLY THR PHE LEU ILE GLU PRO SEQRES 19 C 437 LYS PRO MET GLU PRO THR LYS HIS GLN TYR ASP VAL ASP SEQRES 20 C 437 THR GLU THR ALA ILE GLY PHE LEU LYS ALA HIS ASN LEU SEQRES 21 C 437 ASP LYS ASP PHE LYS VAL ASN ILE GLU VAL ASN HIS ALA SEQRES 22 C 437 THR LEU ALA GLY HIS THR PHE GLU HIS GLU LEU ALA CYS SEQRES 23 C 437 ALA VAL ASP ALA GLY MET LEU GLY SER ILE ASP ALA ASN SEQRES 24 C 437 ARG GLY ASP TYR GLN ASN GLY TRP ASP THR ASP GLN PHE SEQRES 25 C 437 PRO ILE ASP GLN TYR GLU LEU VAL GLN ALA TRP MET GLU SEQRES 26 C 437 ILE ILE ARG GLY GLY GLY PHE VAL THR GLY GLY THR ASN SEQRES 27 C 437 PHE ASP ALA LYS THR ARG ARG ASN SER THR ASP LEU GLU SEQRES 28 C 437 ASP ILE ILE ILE ALA HIS VAL SER GLY MET ASP ALA MET SEQRES 29 C 437 ALA ARG ALA LEU GLU ASN ALA ALA LYS LEU LEU GLN GLU SEQRES 30 C 437 SER PRO TYR THR LYS MET LYS LYS GLU ARG TYR ALA SER SEQRES 31 C 437 PHE ASP SER GLY ILE GLY LYS ASP PHE GLU ASP GLY LYS SEQRES 32 C 437 LEU THR LEU GLU GLN VAL TYR GLU TYR GLY LYS LYS ASN SEQRES 33 C 437 GLY GLU PRO LYS GLN THR SER GLY LYS GLN GLU LEU TYR SEQRES 34 C 437 GLU ALA ILE VAL ALA MET TYR GLN SEQRES 1 D 437 MET ALA LYS GLU TYR PHE PRO GLN ILE GLN LYS ILE LYS SEQRES 2 D 437 PHE GLU GLY LYS ASP SER LYS ASN PRO LEU ALA PHE HIS SEQRES 3 D 437 TYR TYR ASP ALA GLU LYS GLU VAL MET GLY LYS LYS MET SEQRES 4 D 437 LYS ASP TRP LEU ARG PHE ALA MET ALA TRP TRP HIS THR SEQRES 5 D 437 LEU CYS ALA GLU GLY ALA ASP GLN PHE GLY GLY GLY THR SEQRES 6 D 437 LYS SER PHE PRO TRP ASN GLU GLY THR ASP ALA ILE GLU SEQRES 7 D 437 ILE ALA LYS GLN LYS VAL ASP ALA GLY PHE GLU ILE MET SEQRES 8 D 437 GLN LYS LEU GLY ILE PRO TYR TYR CYS PHE HIS ASP VAL SEQRES 9 D 437 ASP LEU VAL SER GLU GLY ASN SER ILE GLU GLU TYR GLU SEQRES 10 D 437 SER ASN LEU LYS ALA VAL VAL ALA TYR LEU LYS GLU LYS SEQRES 11 D 437 GLN LYS GLU THR GLY ILE LYS LEU LEU TRP SER THR ALA SEQRES 12 D 437 ASN VAL PHE GLY HIS LYS ARG TYR MET ASN GLY ALA SER SEQRES 13 D 437 THR ASN PRO ASP PHE ASP VAL VAL ALA ARG ALA ILE VAL SEQRES 14 D 437 GLN ILE LYS ASN ALA ILE ASP ALA GLY ILE GLU LEU GLY SEQRES 15 D 437 ALA GLU ASN TYR VAL PHE TRP GLY GLY ARG GLU GLY TYR SEQRES 16 D 437 MET SER LEU LEU ASN THR ASP GLN LYS ARG GLU LYS GLU SEQRES 17 D 437 HIS MET ALA THR MET LEU THR MET ALA ARG ASP TYR ALA SEQRES 18 D 437 ARG SER LYS GLY PHE LYS GLY THR PHE LEU ILE GLU PRO SEQRES 19 D 437 LYS PRO MET GLU PRO THR LYS HIS GLN TYR ASP VAL ASP SEQRES 20 D 437 THR GLU THR ALA ILE GLY PHE LEU LYS ALA HIS ASN LEU SEQRES 21 D 437 ASP LYS ASP PHE LYS VAL ASN ILE GLU VAL ASN HIS ALA SEQRES 22 D 437 THR LEU ALA GLY HIS THR PHE GLU HIS GLU LEU ALA CYS SEQRES 23 D 437 ALA VAL ASP ALA GLY MET LEU GLY SER ILE ASP ALA ASN SEQRES 24 D 437 ARG GLY ASP TYR GLN ASN GLY TRP ASP THR ASP GLN PHE SEQRES 25 D 437 PRO ILE ASP GLN TYR GLU LEU VAL GLN ALA TRP MET GLU SEQRES 26 D 437 ILE ILE ARG GLY GLY GLY PHE VAL THR GLY GLY THR ASN SEQRES 27 D 437 PHE ASP ALA LYS THR ARG ARG ASN SER THR ASP LEU GLU SEQRES 28 D 437 ASP ILE ILE ILE ALA HIS VAL SER GLY MET ASP ALA MET SEQRES 29 D 437 ALA ARG ALA LEU GLU ASN ALA ALA LYS LEU LEU GLN GLU SEQRES 30 D 437 SER PRO TYR THR LYS MET LYS LYS GLU ARG TYR ALA SER SEQRES 31 D 437 PHE ASP SER GLY ILE GLY LYS ASP PHE GLU ASP GLY LYS SEQRES 32 D 437 LEU THR LEU GLU GLN VAL TYR GLU TYR GLY LYS LYS ASN SEQRES 33 D 437 GLY GLU PRO LYS GLN THR SER GLY LYS GLN GLU LEU TYR SEQRES 34 D 437 GLU ALA ILE VAL ALA MET TYR GLN HET MN A 501 1 HET MN A 502 1 HET XLS A 503 10 HET XYP A 504 10 HET XYP A 505 10 HET XYP A 506 10 HET SO4 A 507 5 HET MN B 501 1 HET MN B 502 1 HET XLS B 503 10 HET XYP B 504 10 HET XYP B 505 10 HET SO4 B 506 5 HET XYP C 501 10 HET MN C 502 1 HET MN C 503 1 HET XLS C 504 10 HET SO4 C 505 5 HET XYP D 501 10 HET MN D 502 1 HET MN D 503 1 HET XLS D 504 10 HET XYP D 505 10 HETNAM MN MANGANESE (II) ION HETNAM XLS D-XYLOSE HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM SO4 SULFATE ION HETSYN XLS D-XYLOSE (LINEAR FORM) HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE FORMUL 5 MN 8(MN 2+) FORMUL 7 XLS 4(C5 H10 O5) FORMUL 8 XYP 8(C5 H10 O5) FORMUL 11 SO4 3(O4 S 2-) FORMUL 28 HOH *1522(H2 O) HELIX 1 AA1 MET A 39 ARG A 44 1 6 HELIX 2 AA2 TRP A 49 CYS A 54 1 6 HELIX 3 AA3 PHE A 68 GLU A 72 5 5 HELIX 4 AA4 ASP A 75 GLY A 95 1 21 HELIX 5 AA5 ASP A 103 VAL A 107 1 5 HELIX 6 AA6 SER A 112 GLY A 135 1 24 HELIX 7 AA7 HIS A 148 MET A 152 5 5 HELIX 8 AA8 ASP A 160 GLY A 182 1 23 HELIX 9 AA9 ASP A 202 LYS A 224 1 23 HELIX 10 AB1 ASP A 247 HIS A 258 1 12 HELIX 11 AB2 VAL A 270 ALA A 276 1 7 HELIX 12 AB3 THR A 279 ALA A 290 1 12 HELIX 13 AB4 ASP A 315 GLY A 329 1 15 HELIX 14 AB5 ASP A 349 SER A 378 1 30 HELIX 15 AB6 PRO A 379 TYR A 388 1 10 HELIX 16 AB7 ALA A 389 ASP A 392 5 4 HELIX 17 AB8 SER A 393 ASP A 401 1 9 HELIX 18 AB9 THR A 405 GLY A 417 1 13 HELIX 19 AC1 LYS A 425 TYR A 436 1 12 HELIX 20 AC2 MET B 39 ARG B 44 1 6 HELIX 21 AC3 TRP B 49 CYS B 54 1 6 HELIX 22 AC4 PHE B 68 GLU B 72 5 5 HELIX 23 AC5 ASP B 75 GLY B 95 1 21 HELIX 24 AC6 ASP B 103 VAL B 107 1 5 HELIX 25 AC7 SER B 112 GLY B 135 1 24 HELIX 26 AC8 HIS B 148 MET B 152 5 5 HELIX 27 AC9 ASP B 160 GLY B 182 1 23 HELIX 28 AD1 ASP B 202 LYS B 224 1 23 HELIX 29 AD2 ASP B 247 HIS B 258 1 12 HELIX 30 AD3 VAL B 270 ALA B 276 1 7 HELIX 31 AD4 THR B 279 ALA B 290 1 12 HELIX 32 AD5 ASP B 315 GLY B 329 1 15 HELIX 33 AD6 LEU B 350 SER B 378 1 29 HELIX 34 AD7 PRO B 379 TYR B 388 1 10 HELIX 35 AD8 ALA B 389 ASP B 392 5 4 HELIX 36 AD9 SER B 393 ASP B 401 1 9 HELIX 37 AE1 THR B 405 GLY B 417 1 13 HELIX 38 AE2 LYS B 425 TYR B 436 1 12 HELIX 39 AE3 MET C 39 ARG C 44 1 6 HELIX 40 AE4 TRP C 49 CYS C 54 1 6 HELIX 41 AE5 PHE C 68 GLU C 72 5 5 HELIX 42 AE6 ASP C 75 GLY C 95 1 21 HELIX 43 AE7 ASP C 103 VAL C 107 1 5 HELIX 44 AE8 SER C 112 GLY C 135 1 24 HELIX 45 AE9 HIS C 148 MET C 152 5 5 HELIX 46 AF1 ASP C 160 LEU C 181 1 22 HELIX 47 AF2 ASP C 202 LYS C 224 1 23 HELIX 48 AF3 ASP C 247 HIS C 258 1 12 HELIX 49 AF4 VAL C 270 ALA C 276 1 7 HELIX 50 AF5 THR C 279 ALA C 290 1 12 HELIX 51 AF6 ASP C 315 GLY C 329 1 15 HELIX 52 AF7 ASP C 349 SER C 378 1 30 HELIX 53 AF8 PRO C 379 TYR C 388 1 10 HELIX 54 AF9 ALA C 389 ASP C 392 5 4 HELIX 55 AG1 SER C 393 ASP C 401 1 9 HELIX 56 AG2 THR C 405 GLY C 417 1 13 HELIX 57 AG3 LYS C 425 TYR C 436 1 12 HELIX 58 AG4 MET D 39 ARG D 44 1 6 HELIX 59 AG5 TRP D 49 CYS D 54 1 6 HELIX 60 AG6 PHE D 68 GLU D 72 5 5 HELIX 61 AG7 ASP D 75 GLY D 95 1 21 HELIX 62 AG8 ASP D 103 VAL D 107 1 5 HELIX 63 AG9 SER D 112 GLY D 135 1 24 HELIX 64 AH1 HIS D 148 MET D 152 5 5 HELIX 65 AH2 ASP D 160 LEU D 181 1 22 HELIX 66 AH3 ASP D 202 LYS D 224 1 23 HELIX 67 AH4 ASP D 247 HIS D 258 1 12 HELIX 68 AH5 VAL D 270 ALA D 276 1 7 HELIX 69 AH6 THR D 279 ALA D 290 1 12 HELIX 70 AH7 ASP D 315 GLY D 329 1 15 HELIX 71 AH8 ASP D 349 SER D 378 1 30 HELIX 72 AH9 PRO D 379 TYR D 388 1 10 HELIX 73 AI1 ALA D 389 ASP D 392 5 4 HELIX 74 AI2 SER D 393 ASP D 401 1 9 HELIX 75 AI3 THR D 405 GLY D 417 1 13 HELIX 76 AI4 LYS D 425 MET D 435 1 11 SHEET 1 AA1 2 GLU A 33 VAL A 34 0 SHEET 2 AA1 2 LYS A 37 LYS A 38 -1 O LYS A 37 N VAL A 34 SHEET 1 AA2 9 PHE A 45 ALA A 48 0 SHEET 2 AA2 9 TYR A 98 HIS A 102 1 O CYS A 100 N MET A 47 SHEET 3 AA2 9 LYS A 137 THR A 142 1 O LEU A 139 N TYR A 99 SHEET 4 AA2 9 ASN A 185 PHE A 188 1 O VAL A 187 N SER A 141 SHEET 5 AA2 9 THR A 229 ILE A 232 1 O LEU A 231 N TYR A 186 SHEET 6 AA2 9 PHE A 264 GLU A 269 1 O LYS A 265 N PHE A 230 SHEET 7 AA2 9 LEU A 293 ASP A 297 1 O GLY A 294 N VAL A 266 SHEET 8 AA2 9 THR A 337 PHE A 339 1 O ASN A 338 N ILE A 296 SHEET 9 AA2 9 PHE A 45 ALA A 48 1 N ALA A 46 O PHE A 339 SHEET 1 AA3 2 GLY A 194 TYR A 195 0 SHEET 2 AA3 2 HIS A 242 GLN A 243 -1 O HIS A 242 N TYR A 195 SHEET 1 AA4 2 GLU B 33 VAL B 34 0 SHEET 2 AA4 2 LYS B 37 LYS B 38 -1 O LYS B 37 N VAL B 34 SHEET 1 AA5 9 PHE B 45 ALA B 48 0 SHEET 2 AA5 9 TYR B 98 HIS B 102 1 O CYS B 100 N MET B 47 SHEET 3 AA5 9 LYS B 137 THR B 142 1 O LEU B 139 N TYR B 99 SHEET 4 AA5 9 ASN B 185 PHE B 188 1 O VAL B 187 N SER B 141 SHEET 5 AA5 9 THR B 229 ILE B 232 1 O LEU B 231 N PHE B 188 SHEET 6 AA5 9 PHE B 264 GLU B 269 1 O LYS B 265 N PHE B 230 SHEET 7 AA5 9 LEU B 293 ASP B 297 1 O GLY B 294 N VAL B 266 SHEET 8 AA5 9 THR B 337 PHE B 339 1 O ASN B 338 N ILE B 296 SHEET 9 AA5 9 PHE B 45 ALA B 48 1 N ALA B 46 O PHE B 339 SHEET 1 AA6 2 GLY B 194 TYR B 195 0 SHEET 2 AA6 2 HIS B 242 GLN B 243 -1 O HIS B 242 N TYR B 195 SHEET 1 AA7 2 GLU C 33 VAL C 34 0 SHEET 2 AA7 2 LYS C 37 LYS C 38 -1 O LYS C 37 N VAL C 34 SHEET 1 AA8 9 PHE C 45 ALA C 48 0 SHEET 2 AA8 9 TYR C 98 HIS C 102 1 O CYS C 100 N MET C 47 SHEET 3 AA8 9 LYS C 137 THR C 142 1 O LEU C 139 N TYR C 99 SHEET 4 AA8 9 ASN C 185 PHE C 188 1 O VAL C 187 N SER C 141 SHEET 5 AA8 9 THR C 229 ILE C 232 1 O LEU C 231 N TYR C 186 SHEET 6 AA8 9 PHE C 264 GLU C 269 1 O LYS C 265 N PHE C 230 SHEET 7 AA8 9 LEU C 293 ASP C 297 1 O GLY C 294 N VAL C 266 SHEET 8 AA8 9 THR C 337 PHE C 339 1 O ASN C 338 N ILE C 296 SHEET 9 AA8 9 PHE C 45 ALA C 48 1 N ALA C 46 O PHE C 339 SHEET 1 AA9 2 GLY C 194 TYR C 195 0 SHEET 2 AA9 2 HIS C 242 GLN C 243 -1 O HIS C 242 N TYR C 195 SHEET 1 AB1 2 GLU D 33 VAL D 34 0 SHEET 2 AB1 2 LYS D 37 LYS D 38 -1 O LYS D 37 N VAL D 34 SHEET 1 AB2 9 PHE D 45 ALA D 48 0 SHEET 2 AB2 9 TYR D 98 HIS D 102 1 O CYS D 100 N MET D 47 SHEET 3 AB2 9 LYS D 137 THR D 142 1 O LEU D 139 N TYR D 99 SHEET 4 AB2 9 ASN D 185 PHE D 188 1 O VAL D 187 N SER D 141 SHEET 5 AB2 9 THR D 229 ILE D 232 1 O LEU D 231 N TYR D 186 SHEET 6 AB2 9 PHE D 264 GLU D 269 1 O LYS D 265 N PHE D 230 SHEET 7 AB2 9 LEU D 293 ASP D 297 1 O GLY D 294 N VAL D 266 SHEET 8 AB2 9 THR D 337 PHE D 339 1 O ASN D 338 N ILE D 296 SHEET 9 AB2 9 PHE D 45 ALA D 48 1 N ALA D 46 O PHE D 339 SHEET 1 AB3 2 GLY D 194 TYR D 195 0 SHEET 2 AB3 2 HIS D 242 GLN D 243 -1 O HIS D 242 N TYR D 195 LINK OE2 GLU A 233 MN MN A 501 1555 1555 2.15 LINK OE1 GLU A 269 MN MN A 501 1555 1555 2.14 LINK OE2 GLU A 269 MN MN A 502 1555 1555 2.29 LINK NE2 HIS A 272 MN MN A 502 1555 1555 2.43 LINK OD2 ASP A 297 MN MN A 501 1555 1555 2.12 LINK OD2 ASP A 308 MN MN A 502 1555 1555 1.99 LINK OD2 ASP A 340 MN MN A 501 1555 1555 2.09 LINK MN MN A 501 O4 XLS A 503 1555 1555 2.20 LINK MN MN A 501 O2 XLS A 503 1555 1555 2.17 LINK MN MN A 502 O2 XLS A 503 1555 1555 2.65 LINK MN MN A 502 O HOH A 702 1555 1555 2.19 LINK OE2 GLU B 233 MN MN B 501 1555 1555 2.08 LINK OE1 GLU B 269 MN MN B 501 1555 1555 2.15 LINK OE2 GLU B 269 MN MN B 502 1555 1555 2.24 LINK NE2 HIS B 272 MN MN B 502 1555 1555 2.35 LINK OD2 ASP B 297 MN MN B 501 1555 1555 2.08 LINK OD2 ASP B 308 MN MN B 502 1555 1555 2.04 LINK OD2 ASP B 340 MN MN B 501 1555 1555 2.17 LINK MN MN B 501 O2 XLS B 503 1555 1555 2.01 LINK MN MN B 501 O4 XLS B 503 1555 1555 2.28 LINK MN MN B 502 O2 XLS B 503 1555 1555 2.73 LINK MN MN B 502 O HOH B 719 1555 1555 2.17 LINK OE2 GLU C 233 MN MN C 502 1555 1555 2.15 LINK OE1 GLU C 269 MN MN C 502 1555 1555 2.11 LINK OE2 GLU C 269 MN MN C 503 1555 1555 2.38 LINK NE2 HIS C 272 MN MN C 503 1555 1555 2.39 LINK OD2 ASP C 297 MN MN C 502 1555 1555 2.13 LINK OD2 ASP C 308 MN MN C 503 1555 1555 2.10 LINK OD2 ASP C 340 MN MN C 502 1555 1555 2.11 LINK MN MN C 502 O4 XLS C 504 1555 1555 2.24 LINK MN MN C 502 O2 XLS C 504 1555 1555 2.14 LINK MN MN C 503 O2 XLS C 504 1555 1555 2.52 LINK MN MN C 503 O HOH C 623 1555 1555 2.24 LINK OE2 GLU D 233 MN MN D 502 1555 1555 2.09 LINK OE1 GLU D 269 MN MN D 502 1555 1555 2.16 LINK OE2 GLU D 269 MN MN D 503 1555 1555 2.37 LINK NE2 HIS D 272 MN MN D 503 1555 1555 2.44 LINK OD2 ASP D 297 MN MN D 502 1555 1555 2.09 LINK OD2 ASP D 308 MN MN D 503 1555 1555 2.03 LINK OD2 ASP D 340 MN MN D 502 1555 1555 2.17 LINK MN MN D 502 O2 XLS D 504 1555 1555 2.21 LINK MN MN D 502 O4 XLS D 504 1555 1555 2.36 LINK MN MN D 503 O1 XLS D 504 1555 1555 2.56 LINK MN MN D 503 O2 XLS D 504 1555 1555 2.62 LINK MN MN D 503 O HOH D 711 1555 1555 2.14 CISPEP 1 GLU A 238 PRO A 239 0 11.33 CISPEP 2 GLU B 238 PRO B 239 0 11.35 CISPEP 3 ALA C 2 LYS C 3 0 -6.39 CISPEP 4 GLU C 238 PRO C 239 0 8.17 CISPEP 5 GLU D 238 PRO D 239 0 9.43 CRYST1 78.690 79.400 92.080 115.37 90.04 117.07 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012708 0.006495 0.003578 0.00000 SCALE2 0.000000 0.014144 0.007771 0.00000 SCALE3 0.000000 0.000000 0.012391 0.00000