HEADER FLUORESCENT PROTEIN 22-MAR-17 5NHN TITLE SUPER-FOLDER GREEN FLUORESCENT PROTEIN ARTIFICIALL DIMER LINKED VIA TITLE 2 148 POSITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 10 ORGANISM_COMMON: JELLYFISH; SOURCE 11 ORGANISM_TAXID: 6100; SOURCE 12 GENE: GFP; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENCE, DIMER, CLICK-CHEMISTRY, ARTIFICIAL DIMER, FLUORESCENT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.L.WORTHY,P.J.RIZKALLAH REVDAT 4 17-JAN-24 5NHN 1 LINK REVDAT 3 16-OCT-19 5NHN 1 REMARK REVDAT 2 31-JUL-19 5NHN 1 JRNL REVDAT 1 26-SEP-18 5NHN 0 JRNL AUTH H.L.WORTHY,H.S.AUHIM,W.D.JAMIESON,J.R.POPE,A.WALL, JRNL AUTH 2 R.BATCHELOR,R.L.JOHNSON,D.W.WATKINS,P.J.RIZKALLAH, JRNL AUTH 3 O.K.CASTELL,D.D.JONES JRNL TITL POSITIVE FUNCTIONAL SYNERGY OF STRUCTURALLY INTEGRATED JRNL TITL 2 ARTIFICIAL PROTEIN DIMERS ASSEMBLED BY CLICK CHEMISTRY JRNL REF COMMUN CHEM 2019 JRNL REFN ESSN 2399-3669 JRNL DOI 10.1038/S42004-019-0185-5 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2231 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3080 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3623 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.66000 REMARK 3 B22 (A**2) : 0.66000 REMARK 3 B33 (A**2) : -2.14000 REMARK 3 B12 (A**2) : 0.33000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.236 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3730 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3407 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5024 ; 1.868 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7940 ; 0.961 ; 2.997 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 7.057 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;34.182 ;24.972 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 636 ;13.131 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.142 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 547 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4106 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 738 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1804 ; 1.562 ; 3.131 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1803 ; 1.563 ; 3.131 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2248 ; 2.188 ; 4.683 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2249 ; 2.188 ; 4.683 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1926 ; 2.266 ; 3.416 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1926 ; 2.263 ; 3.416 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2777 ; 3.453 ; 5.020 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3856 ; 5.956 ;36.682 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3826 ; 5.949 ;36.370 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 2 64 A 2 64 3318 0.07 0.05 REMARK 3 2 B 68 228 A 68 228 9474 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 231 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9650 -24.9695 1.5762 REMARK 3 T TENSOR REMARK 3 T11: 0.0217 T22: 0.0604 REMARK 3 T33: 0.0291 T12: -0.0319 REMARK 3 T13: 0.0217 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 2.4701 L22: 2.1089 REMARK 3 L33: 1.9063 L12: -0.7436 REMARK 3 L13: 0.1451 L23: -0.3027 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.1016 S13: -0.0531 REMARK 3 S21: -0.0457 S22: 0.0052 S23: 0.0626 REMARK 3 S31: 0.0442 S32: 0.0428 S33: -0.0146 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): -34.4816 -42.5663 -16.1897 REMARK 3 T TENSOR REMARK 3 T11: 0.1761 T22: 0.1803 REMARK 3 T33: 0.2026 T12: -0.1121 REMARK 3 T13: -0.1058 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 3.1684 L22: 2.1057 REMARK 3 L33: 1.9752 L12: 0.1735 REMARK 3 L13: 0.1300 L23: -0.2671 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: 0.1340 S13: -0.0766 REMARK 3 S21: -0.2490 S22: 0.1011 S23: 0.4131 REMARK 3 S31: 0.2162 S32: -0.3624 S33: -0.1257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5NHN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1200004010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 67.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.80 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BTO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CONDITION C6 OF THE PACT PREMIER REMARK 280 SCREEN: 0.1 M PCTP BUFFER, PH 9.0, 25% PEG 1500, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.61333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.30667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.46000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.15333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.76667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 230 REMARK 465 HIS A 231 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 17 NH1 ARG A 122 2.09 REMARK 500 OE1 GLU B 17 NH1 ARG B 122 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 30 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 168 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP B 210 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 30 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 168 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 103 -154.70 -151.42 REMARK 500 ASP A 103 -152.27 -150.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DB5 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 DBREF1 5NHN B 3 231 UNP A0A059PIQ0_AEQVI DBREF2 5NHN B A0A059PIQ0 3 231 DBREF1 5NHN A 3 231 UNP A0A059PIQ0_AEQVI DBREF2 5NHN A A0A059PIQ0 3 231 SEQADV 5NHN SER B 2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5NHN ARG B 30 UNP A0A059PIQ SER 30 ENGINEERED MUTATION SEQADV 5NHN CRO B 66 UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5NHN CRO B 66 UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5NHN CRO B 66 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5NHN SER B 72 UNP A0A059PIQ ALA 72 ENGINEERED MUTATION SEQADV 5NHN ARG B 80 UNP A0A059PIQ GLN 80 ENGINEERED MUTATION SEQADV 5NHN LYS B 148 UNP A0A059PIQ HIS 148 ENGINEERED MUTATION SEQADV 5NHN VAL B 206 UNP A0A059PIQ ALA 206 ENGINEERED MUTATION SEQADV 5NHN SER A 2 UNP A0A059PIQ EXPRESSION TAG SEQADV 5NHN ARG A 30 UNP A0A059PIQ SER 30 ENGINEERED MUTATION SEQADV 5NHN CRO A 66 UNP A0A059PIQ THR 65 CHROMOPHORE SEQADV 5NHN CRO A 66 UNP A0A059PIQ TYR 66 CHROMOPHORE SEQADV 5NHN CRO A 66 UNP A0A059PIQ GLY 67 CHROMOPHORE SEQADV 5NHN SER A 72 UNP A0A059PIQ ALA 72 ENGINEERED MUTATION SEQADV 5NHN ARG A 80 UNP A0A059PIQ GLN 80 ENGINEERED MUTATION SEQADV 5NHN PHE A 148 UNP A0A059PIQ HIS 148 ENGINEERED MUTATION SEQADV 5NHN VAL A 206 UNP A0A059PIQ ALA 206 ENGINEERED MUTATION SEQRES 1 B 228 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 2 B 228 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 3 B 228 SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN GLY SEQRES 4 B 228 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 5 B 228 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL SEQRES 6 B 228 GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG HIS SEQRES 7 B 228 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 8 B 228 GLU ARG THR ILE SER PHE LYS ASP ASP GLY THR TYR LYS SEQRES 9 B 228 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 10 B 228 ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP SEQRES 11 B 228 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN PHE ASN SEQRES 12 B 228 SER LYS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS ASN SEQRES 13 B 228 GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN VAL GLU SEQRES 14 B 228 ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 15 B 228 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 16 B 228 HIS TYR LEU SER THR GLN SER VAL LEU SER LYS ASP PRO SEQRES 17 B 228 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 18 B 228 THR ALA ALA GLY ILE THR HIS SEQRES 1 A 228 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 2 A 228 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 3 A 228 SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN GLY SEQRES 4 A 228 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 5 A 228 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL SEQRES 6 A 228 GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG HIS SEQRES 7 A 228 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 8 A 228 GLU ARG THR ILE SER PHE LYS ASP ASP GLY THR TYR LYS SEQRES 9 A 228 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 10 A 228 ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP SEQRES 11 A 228 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN PHE ASN SEQRES 12 A 228 SER PHE ASN VAL TYR ILE THR ALA ASP LYS GLN LYS ASN SEQRES 13 A 228 GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN VAL GLU SEQRES 14 A 228 ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 15 A 228 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 16 A 228 HIS TYR LEU SER THR GLN SER VAL LEU SER LYS ASP PRO SEQRES 17 A 228 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 18 A 228 THR ALA ALA GLY ILE THR HIS MODRES 5NHN CRO B 66 GLY CHROMOPHORE MODRES 5NHN CRO A 66 GLY CHROMOPHORE HET CRO B 66 22 HET CRO A 66 22 HET DB5 B 301 14 HET GOL B 302 6 HET EDO B 303 4 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM DB5 [(4~{S})-4,5,6,7,8,9-HEXAHYDRO-1~{H}-CYCLOOCTA[D][1,2, HETNAM 2 DB5 3]TRIAZOL-4-YL] HYDROGEN CARBONATE HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN CRO PEPTIDE DERIVED CHROMOPHORE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CRO 2(C15 H17 N3 O5) FORMUL 3 DB5 C9 H13 N3 O3 FORMUL 4 GOL C3 H8 O3 FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *245(H2 O) HELIX 1 AA1 LYS B 3 THR B 9 5 7 HELIX 2 AA2 ALA B 37 ASN B 39 5 3 HELIX 3 AA3 PRO B 56 VAL B 61 5 6 HELIX 4 AA4 VAL B 68 SER B 72 5 5 HELIX 5 AA5 PRO B 75 HIS B 81 5 7 HELIX 6 AA6 ASP B 82 ALA B 87 1 6 HELIX 7 AA7 LYS B 156 ASN B 159 5 4 HELIX 8 AA8 LYS A 3 THR A 9 5 7 HELIX 9 AA9 PRO A 56 VAL A 61 5 6 HELIX 10 AB1 VAL A 68 SER A 72 5 5 HELIX 11 AB2 PRO A 75 HIS A 81 5 7 HELIX 12 AB3 ASP A 82 ALA A 87 1 6 HELIX 13 AB4 LYS A 156 ASN A 159 5 4 SHEET 1 AA112 VAL B 12 VAL B 22 0 SHEET 2 AA112 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 AA112 LYS B 41 CYS B 48 -1 O LYS B 41 N ASP B 36 SHEET 4 AA112 HIS B 217 ALA B 227 -1 O LEU B 220 N LEU B 44 SHEET 5 AA112 HIS B 199 SER B 208 -1 N SER B 202 O THR B 225 SHEET 6 AA112 VAL B 150 ASP B 155 -1 N ILE B 152 O HIS B 199 SHEET 7 AA112 GLY B 160 ASN B 170 -1 O GLY B 160 N ASP B 155 SHEET 8 AA112 VAL B 176 PRO B 187 -1 O HIS B 181 N PHE B 165 SHEET 9 AA112 TYR B 92 PHE B 100 -1 N VAL B 93 O THR B 186 SHEET 10 AA112 THR B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 AA112 THR B 118 ILE B 128 -1 O GLU B 124 N ARG B 109 SHEET 12 AA112 VAL B 12 VAL B 22 1 N ASP B 21 O GLY B 127 SHEET 1 AA212 VAL A 12 VAL A 22 0 SHEET 2 AA212 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 AA212 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 AA212 HIS A 217 ALA A 227 -1 O MET A 218 N PHE A 46 SHEET 5 AA212 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 AA212 VAL A 150 ASP A 155 -1 N VAL A 150 O LEU A 201 SHEET 7 AA212 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 AA212 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 AA212 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 AA212 THR A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 AA212 THR A 118 ILE A 128 -1 O GLU A 124 N ARG A 109 SHEET 12 AA212 VAL A 12 VAL A 22 1 N ASP A 21 O GLY A 127 LINK C LEU B 64 N1 CRO B 66 1555 1555 1.32 LINK C3 CRO B 66 N VAL B 68 1555 1555 1.29 LINK NZ LYS B 148 CH DB5 B 301 1555 1555 1.35 LINK N03 DB5 B 301 CZ PHE A 148 1555 1555 1.40 LINK C LEU A 64 N1 CRO A 66 1555 1555 1.33 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.30 CISPEP 1 MET B 88 PRO B 89 0 7.87 CISPEP 2 MET A 88 PRO A 89 0 9.38 SITE 1 AC1 10 ASN A 146 PHE A 148 ARG A 168 ASN A 170 SITE 2 AC1 10 VAL A 176 ASN B 146 LYS B 148 ARG B 168 SITE 3 AC1 10 HOH B 458 HOH B 540 SITE 1 AC2 8 LYS B 101 ASP B 102 ASN B 135 VAL B 176 SITE 2 AC2 8 GLN B 177 LEU B 178 HOH B 424 HOH B 445 SITE 1 AC3 4 ARG B 96 THR B 97 TYR B 182 GLN B 184 CRYST1 99.800 99.800 108.920 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010020 0.005785 0.000000 0.00000 SCALE2 0.000000 0.011570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009181 0.00000