data_5NJR
#
_entry.id 5NJR
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 5NJR pdb_00005njr 10.2210/pdb5njr/pdb
WWPDB D_1200004243 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2017-10-18
2 'Structure model' 1 1 2017-11-22
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2024-01-17
5 'Structure model' 2 2 2024-11-13
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Non-polymer description'
6 3 'Structure model' 'Structure summary'
7 4 'Structure model' 'Data collection'
8 4 'Structure model' 'Database references'
9 4 'Structure model' 'Refinement description'
10 4 'Structure model' 'Structure summary'
11 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' atom_site
3 3 'Structure model' chem_comp
4 3 'Structure model' entity
5 3 'Structure model' entity_name_com
6 3 'Structure model' pdbx_branch_scheme
7 3 'Structure model' pdbx_chem_comp_identifier
8 3 'Structure model' pdbx_entity_branch
9 3 'Structure model' pdbx_entity_branch_descriptor
10 3 'Structure model' pdbx_entity_branch_link
11 3 'Structure model' pdbx_entity_branch_list
12 3 'Structure model' pdbx_entity_nonpoly
13 3 'Structure model' pdbx_molecule_features
14 3 'Structure model' pdbx_nonpoly_scheme
15 3 'Structure model' struct_conn
16 3 'Structure model' struct_conn_type
17 3 'Structure model' struct_site
18 3 'Structure model' struct_site_gen
19 4 'Structure model' chem_comp
20 4 'Structure model' chem_comp_atom
21 4 'Structure model' chem_comp_bond
22 4 'Structure model' database_2
23 4 'Structure model' pdbx_initial_refinement_model
24 5 'Structure model' pdbx_entry_details
25 5 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_abbrev'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 2 'Structure model' '_citation.pdbx_database_id_PubMed'
5 3 'Structure model' '_atom_site.B_iso_or_equiv'
6 3 'Structure model' '_atom_site.Cartn_x'
7 3 'Structure model' '_atom_site.Cartn_y'
8 3 'Structure model' '_atom_site.Cartn_z'
9 3 'Structure model' '_atom_site.auth_asym_id'
10 3 'Structure model' '_atom_site.auth_atom_id'
11 3 'Structure model' '_atom_site.auth_comp_id'
12 3 'Structure model' '_atom_site.auth_seq_id'
13 3 'Structure model' '_atom_site.label_atom_id'
14 3 'Structure model' '_atom_site.label_comp_id'
15 3 'Structure model' '_atom_site.occupancy'
16 3 'Structure model' '_atom_site.type_symbol'
17 3 'Structure model' '_chem_comp.formula'
18 3 'Structure model' '_chem_comp.formula_weight'
19 3 'Structure model' '_chem_comp.id'
20 3 'Structure model' '_chem_comp.mon_nstd_flag'
21 3 'Structure model' '_chem_comp.name'
22 3 'Structure model' '_chem_comp.pdbx_synonyms'
23 3 'Structure model' '_chem_comp.type'
24 3 'Structure model' '_entity.formula_weight'
25 3 'Structure model' '_entity.pdbx_description'
26 3 'Structure model' '_entity.type'
27 4 'Structure model' '_chem_comp.pdbx_synonyms'
28 4 'Structure model' '_database_2.pdbx_DOI'
29 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 5NJR
_pdbx_database_status.recvd_initial_deposition_date 2017-03-29
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.details
_pdbx_database_related.db_id
_pdbx_database_related.content_type
PDB 'Same crystals, but shorter mixing time (1s between mixing and probing with X-rays)' 5NJQ unspecified
PDB 'Same crystals, but shorter mixing time (1s between mixing and probing with X-rays)' 5NJP unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Oberthuer, D.' 1 ?
'Meents, A.' 2 ?
'Beyerlein, K.R.' 3 ?
'Chapman, H.N.' 4 ?
'Lieseke, J.' 5 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev IUCrJ
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2052-2525
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 4
_citation.language ?
_citation.page_first 769
_citation.page_last 777
_citation.title 'Mix-and-diffuse serial synchrotron crystallography.'
_citation.year 2017
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1107/S2052252517013124
_citation.pdbx_database_id_PubMed 29123679
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Beyerlein, K.R.' 1 ?
primary 'Dierksmeyer, D.' 2 ?
primary 'Mariani, V.' 3 ?
primary 'Kuhn, M.' 4 ?
primary 'Sarrou, I.' 5 ?
primary 'Ottaviano, A.' 6 ?
primary 'Awel, S.' 7 ?
primary 'Knoska, J.' 8 ?
primary 'Fuglerud, S.' 9 ?
primary 'Jonsson, O.' 10 ?
primary 'Stern, S.' 11 ?
primary 'Wiedorn, M.O.' 12 ?
primary 'Yefanov, O.' 13 ?
primary 'Adriano, L.' 14 ?
primary 'Bean, R.' 15 ?
primary 'Burkhardt, A.' 16 ?
primary 'Fischer, P.' 17 ?
primary 'Heymann, M.' 18 ?
primary 'Horke, D.A.' 19 ?
primary 'Jungnickel, K.E.J.' 20 ?
primary 'Kovaleva, E.' 21 ?
primary 'Lorbeer, O.' 22 ?
primary 'Metz, M.' 23 ?
primary 'Meyer, J.' 24 ?
primary 'Morgan, A.' 25 ?
primary 'Pande, K.' 26 ?
primary 'Panneerselvam, S.' 27 ?
primary 'Seuring, C.' 28 ?
primary 'Tolstikova, A.' 29 ?
primary 'Lieske, J.' 30 ?
primary 'Aplin, S.' 31 ?
primary 'Roessle, M.' 32 ?
primary 'White, T.A.' 33 ?
primary 'Chapman, H.N.' 34 ?
primary 'Meents, A.' 35 ?
primary 'Oberthuer, D.' 36 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'Lysozyme C' 14331.160 1 3.2.1.17 ? ? ?
2 branched man
;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
;
627.594 1 ? ? ? ?
3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ?
4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ?
5 water nat water 18.015 59 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1 '1,4-beta-N-acetylmuramidase C,Allergen Gal d IV'
2 triacetyl-beta-chitotriose
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
;
_entity_poly.pdbx_seq_one_letter_code_can
;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'CHLORIDE ION' CL
4 'SODIUM ION' NA
5 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 LYS n
1 2 VAL n
1 3 PHE n
1 4 GLY n
1 5 ARG n
1 6 CYS n
1 7 GLU n
1 8 LEU n
1 9 ALA n
1 10 ALA n
1 11 ALA n
1 12 MET n
1 13 LYS n
1 14 ARG n
1 15 HIS n
1 16 GLY n
1 17 LEU n
1 18 ASP n
1 19 ASN n
1 20 TYR n
1 21 ARG n
1 22 GLY n
1 23 TYR n
1 24 SER n
1 25 LEU n
1 26 GLY n
1 27 ASN n
1 28 TRP n
1 29 VAL n
1 30 CYS n
1 31 ALA n
1 32 ALA n
1 33 LYS n
1 34 PHE n
1 35 GLU n
1 36 SER n
1 37 ASN n
1 38 PHE n
1 39 ASN n
1 40 THR n
1 41 GLN n
1 42 ALA n
1 43 THR n
1 44 ASN n
1 45 ARG n
1 46 ASN n
1 47 THR n
1 48 ASP n
1 49 GLY n
1 50 SER n
1 51 THR n
1 52 ASP n
1 53 TYR n
1 54 GLY n
1 55 ILE n
1 56 LEU n
1 57 GLN n
1 58 ILE n
1 59 ASN n
1 60 SER n
1 61 ARG n
1 62 TRP n
1 63 TRP n
1 64 CYS n
1 65 ASN n
1 66 ASP n
1 67 GLY n
1 68 ARG n
1 69 THR n
1 70 PRO n
1 71 GLY n
1 72 SER n
1 73 ARG n
1 74 ASN n
1 75 LEU n
1 76 CYS n
1 77 ASN n
1 78 ILE n
1 79 PRO n
1 80 CYS n
1 81 SER n
1 82 ALA n
1 83 LEU n
1 84 LEU n
1 85 SER n
1 86 SER n
1 87 ASP n
1 88 ILE n
1 89 THR n
1 90 ALA n
1 91 SER n
1 92 VAL n
1 93 ASN n
1 94 CYS n
1 95 ALA n
1 96 LYS n
1 97 LYS n
1 98 ILE n
1 99 VAL n
1 100 SER n
1 101 ASP n
1 102 GLY n
1 103 ASN n
1 104 GLY n
1 105 MET n
1 106 ASN n
1 107 ALA n
1 108 TRP n
1 109 VAL n
1 110 ALA n
1 111 TRP n
1 112 ARG n
1 113 ASN n
1 114 ARG n
1 115 CYS n
1 116 LYS n
1 117 GLY n
1 118 THR n
1 119 ASP n
1 120 VAL n
1 121 GLN n
1 122 ALA n
1 123 TRP n
1 124 ILE n
1 125 ARG n
1 126 GLY n
1 127 CYS n
1 128 ARG n
1 129 LEU n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num 1
_entity_src_nat.pdbx_end_seq_num 129
_entity_src_nat.common_name Chicken
_entity_src_nat.pdbx_organism_scientific 'Gallus gallus'
_entity_src_nat.pdbx_ncbi_taxonomy_id 9031
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGlcpNAcb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/1,3,2/[a2122h-1b_1-5_2*NCC/3=O]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0
3 2 '[][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ?
2 2 3 NAG C1 O1 2 NAG O4 HO4 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 LYS 1 1 1 LYS LYS A . n
A 1 2 VAL 2 2 2 VAL VAL A . n
A 1 3 PHE 3 3 3 PHE PHE A . n
A 1 4 GLY 4 4 4 GLY GLY A . n
A 1 5 ARG 5 5 5 ARG ARG A . n
A 1 6 CYS 6 6 6 CYS CYS A . n
A 1 7 GLU 7 7 7 GLU GLU A . n
A 1 8 LEU 8 8 8 LEU LEU A . n
A 1 9 ALA 9 9 9 ALA ALA A . n
A 1 10 ALA 10 10 10 ALA ALA A . n
A 1 11 ALA 11 11 11 ALA ALA A . n
A 1 12 MET 12 12 12 MET MET A . n
A 1 13 LYS 13 13 13 LYS LYS A . n
A 1 14 ARG 14 14 14 ARG ARG A . n
A 1 15 HIS 15 15 15 HIS HIS A . n
A 1 16 GLY 16 16 16 GLY GLY A . n
A 1 17 LEU 17 17 17 LEU LEU A . n
A 1 18 ASP 18 18 18 ASP ASP A . n
A 1 19 ASN 19 19 19 ASN ASN A . n
A 1 20 TYR 20 20 20 TYR TYR A . n
A 1 21 ARG 21 21 21 ARG ARG A . n
A 1 22 GLY 22 22 22 GLY GLY A . n
A 1 23 TYR 23 23 23 TYR TYR A . n
A 1 24 SER 24 24 24 SER SER A . n
A 1 25 LEU 25 25 25 LEU LEU A . n
A 1 26 GLY 26 26 26 GLY GLY A . n
A 1 27 ASN 27 27 27 ASN ASN A . n
A 1 28 TRP 28 28 28 TRP TRP A . n
A 1 29 VAL 29 29 29 VAL VAL A . n
A 1 30 CYS 30 30 30 CYS CYS A . n
A 1 31 ALA 31 31 31 ALA ALA A . n
A 1 32 ALA 32 32 32 ALA ALA A . n
A 1 33 LYS 33 33 33 LYS LYS A . n
A 1 34 PHE 34 34 34 PHE PHE A . n
A 1 35 GLU 35 35 35 GLU GLU A . n
A 1 36 SER 36 36 36 SER SER A . n
A 1 37 ASN 37 37 37 ASN ASN A . n
A 1 38 PHE 38 38 38 PHE PHE A . n
A 1 39 ASN 39 39 39 ASN ASN A . n
A 1 40 THR 40 40 40 THR THR A . n
A 1 41 GLN 41 41 41 GLN GLN A . n
A 1 42 ALA 42 42 42 ALA ALA A . n
A 1 43 THR 43 43 43 THR THR A . n
A 1 44 ASN 44 44 44 ASN ASN A . n
A 1 45 ARG 45 45 45 ARG ARG A . n
A 1 46 ASN 46 46 46 ASN ASN A . n
A 1 47 THR 47 47 47 THR THR A . n
A 1 48 ASP 48 48 48 ASP ASP A . n
A 1 49 GLY 49 49 49 GLY GLY A . n
A 1 50 SER 50 50 50 SER SER A . n
A 1 51 THR 51 51 51 THR THR A . n
A 1 52 ASP 52 52 52 ASP ASP A . n
A 1 53 TYR 53 53 53 TYR TYR A . n
A 1 54 GLY 54 54 54 GLY GLY A . n
A 1 55 ILE 55 55 55 ILE ILE A . n
A 1 56 LEU 56 56 56 LEU LEU A . n
A 1 57 GLN 57 57 57 GLN GLN A . n
A 1 58 ILE 58 58 58 ILE ILE A . n
A 1 59 ASN 59 59 59 ASN ASN A . n
A 1 60 SER 60 60 60 SER SER A . n
A 1 61 ARG 61 61 61 ARG ARG A . n
A 1 62 TRP 62 62 62 TRP TRP A . n
A 1 63 TRP 63 63 63 TRP TRP A . n
A 1 64 CYS 64 64 64 CYS CYS A . n
A 1 65 ASN 65 65 65 ASN ASN A . n
A 1 66 ASP 66 66 66 ASP ASP A . n
A 1 67 GLY 67 67 67 GLY GLY A . n
A 1 68 ARG 68 68 68 ARG ARG A . n
A 1 69 THR 69 69 69 THR THR A . n
A 1 70 PRO 70 70 70 PRO PRO A . n
A 1 71 GLY 71 71 71 GLY GLY A . n
A 1 72 SER 72 72 72 SER SER A . n
A 1 73 ARG 73 73 73 ARG ARG A . n
A 1 74 ASN 74 74 74 ASN ASN A . n
A 1 75 LEU 75 75 75 LEU LEU A . n
A 1 76 CYS 76 76 76 CYS CYS A . n
A 1 77 ASN 77 77 77 ASN ASN A . n
A 1 78 ILE 78 78 78 ILE ILE A . n
A 1 79 PRO 79 79 79 PRO PRO A . n
A 1 80 CYS 80 80 80 CYS CYS A . n
A 1 81 SER 81 81 81 SER SER A . n
A 1 82 ALA 82 82 82 ALA ALA A . n
A 1 83 LEU 83 83 83 LEU LEU A . n
A 1 84 LEU 84 84 84 LEU LEU A . n
A 1 85 SER 85 85 85 SER SER A . n
A 1 86 SER 86 86 86 SER SER A . n
A 1 87 ASP 87 87 87 ASP ASP A . n
A 1 88 ILE 88 88 88 ILE ILE A . n
A 1 89 THR 89 89 89 THR THR A . n
A 1 90 ALA 90 90 90 ALA ALA A . n
A 1 91 SER 91 91 91 SER SER A . n
A 1 92 VAL 92 92 92 VAL VAL A . n
A 1 93 ASN 93 93 93 ASN ASN A . n
A 1 94 CYS 94 94 94 CYS CYS A . n
A 1 95 ALA 95 95 95 ALA ALA A . n
A 1 96 LYS 96 96 96 LYS LYS A . n
A 1 97 LYS 97 97 97 LYS LYS A . n
A 1 98 ILE 98 98 98 ILE ILE A . n
A 1 99 VAL 99 99 99 VAL VAL A . n
A 1 100 SER 100 100 100 SER SER A . n
A 1 101 ASP 101 101 101 ASP ASP A . n
A 1 102 GLY 102 102 102 GLY GLY A . n
A 1 103 ASN 103 103 103 ASN ASN A . n
A 1 104 GLY 104 104 104 GLY GLY A . n
A 1 105 MET 105 105 105 MET MET A . n
A 1 106 ASN 106 106 106 ASN ASN A . n
A 1 107 ALA 107 107 107 ALA ALA A . n
A 1 108 TRP 108 108 108 TRP TRP A . n
A 1 109 VAL 109 109 109 VAL VAL A . n
A 1 110 ALA 110 110 110 ALA ALA A . n
A 1 111 TRP 111 111 111 TRP TRP A . n
A 1 112 ARG 112 112 112 ARG ARG A . n
A 1 113 ASN 113 113 113 ASN ASN A . n
A 1 114 ARG 114 114 114 ARG ARG A . n
A 1 115 CYS 115 115 115 CYS CYS A . n
A 1 116 LYS 116 116 116 LYS LYS A . n
A 1 117 GLY 117 117 117 GLY GLY A . n
A 1 118 THR 118 118 118 THR THR A . n
A 1 119 ASP 119 119 119 ASP ASP A . n
A 1 120 VAL 120 120 120 VAL VAL A . n
A 1 121 GLN 121 121 121 GLN GLN A . n
A 1 122 ALA 122 122 122 ALA ALA A . n
A 1 123 TRP 123 123 123 TRP TRP A . n
A 1 124 ILE 124 124 124 ILE ILE A . n
A 1 125 ARG 125 125 125 ARG ARG A . n
A 1 126 GLY 126 126 126 GLY GLY A . n
A 1 127 CYS 127 127 127 CYS CYS A . n
A 1 128 ARG 128 128 128 ARG ARG A . n
A 1 129 LEU 129 129 129 LEU LEU A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 A CTO 130 n
B 2 NAG 2 B NAG 2 A CTO 130 n
B 2 NAG 3 B NAG 3 A CTO 130 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CL 1 202 131 CL CL A .
D 3 CL 1 203 132 CL CL A .
E 3 CL 1 204 133 CL CL A .
F 4 NA 1 205 134 NA NA A .
G 5 HOH 1 301 192 HOH HOH A .
G 5 HOH 2 302 165 HOH HOH A .
G 5 HOH 3 303 193 HOH HOH A .
G 5 HOH 4 304 143 HOH HOH A .
G 5 HOH 5 305 136 HOH HOH A .
G 5 HOH 6 306 180 HOH HOH A .
G 5 HOH 7 307 175 HOH HOH A .
G 5 HOH 8 308 155 HOH HOH A .
G 5 HOH 9 309 156 HOH HOH A .
G 5 HOH 10 310 152 HOH HOH A .
G 5 HOH 11 311 169 HOH HOH A .
G 5 HOH 12 312 138 HOH HOH A .
G 5 HOH 13 313 158 HOH HOH A .
G 5 HOH 14 314 172 HOH HOH A .
G 5 HOH 15 315 171 HOH HOH A .
G 5 HOH 16 316 137 HOH HOH A .
G 5 HOH 17 317 150 HOH HOH A .
G 5 HOH 18 318 147 HOH HOH A .
G 5 HOH 19 319 177 HOH HOH A .
G 5 HOH 20 320 154 HOH HOH A .
G 5 HOH 21 321 186 HOH HOH A .
G 5 HOH 22 322 149 HOH HOH A .
G 5 HOH 23 323 163 HOH HOH A .
G 5 HOH 24 324 191 HOH HOH A .
G 5 HOH 25 325 159 HOH HOH A .
G 5 HOH 26 326 135 HOH HOH A .
G 5 HOH 27 327 170 HOH HOH A .
G 5 HOH 28 328 182 HOH HOH A .
G 5 HOH 29 329 139 HOH HOH A .
G 5 HOH 30 330 166 HOH HOH A .
G 5 HOH 31 331 148 HOH HOH A .
G 5 HOH 32 332 174 HOH HOH A .
G 5 HOH 33 333 141 HOH HOH A .
G 5 HOH 34 334 142 HOH HOH A .
G 5 HOH 35 335 168 HOH HOH A .
G 5 HOH 36 336 145 HOH HOH A .
G 5 HOH 37 337 146 HOH HOH A .
G 5 HOH 38 338 153 HOH HOH A .
G 5 HOH 39 339 140 HOH HOH A .
G 5 HOH 40 340 173 HOH HOH A .
G 5 HOH 41 341 184 HOH HOH A .
G 5 HOH 42 342 190 HOH HOH A .
G 5 HOH 43 343 187 HOH HOH A .
G 5 HOH 44 344 185 HOH HOH A .
G 5 HOH 45 345 183 HOH HOH A .
G 5 HOH 46 346 144 HOH HOH A .
G 5 HOH 47 347 164 HOH HOH A .
G 5 HOH 48 348 181 HOH HOH A .
G 5 HOH 49 349 167 HOH HOH A .
G 5 HOH 50 350 161 HOH HOH A .
G 5 HOH 51 351 176 HOH HOH A .
G 5 HOH 52 352 160 HOH HOH A .
G 5 HOH 53 353 157 HOH HOH A .
G 5 HOH 54 354 179 HOH HOH A .
G 5 HOH 55 355 162 HOH HOH A .
G 5 HOH 56 356 151 HOH HOH A .
G 5 HOH 57 357 189 HOH HOH A .
G 5 HOH 58 358 178 HOH HOH A .
G 5 HOH 59 359 188 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 5NJR
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 79.610
_cell.length_a_esd ?
_cell.length_b 79.610
_cell.length_b_esd ?
_cell.length_c 38.300
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 8
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 5NJR
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 5NJR
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.12
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 41.90
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'BATCH MODE'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 3.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 274
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
;Crystals with sizes between 6 and 8 um in diameter were obtained by adding three parts of precipitant (1M NaCl, 40% ethylene glycol (v/v), 15% PEG4000 (w/v), 50 mM acetate buffer at pH 3.5, filtered through 450 nm filter) to one part of lysozyme (Sigma-Aldrich, 126 mg/ml dissolved in50 mM acetate buffer, pH 3.5, filtered through 100 nm filter) at 274K (ThermoStat C, Eppendorf, Germany). The resulting mixture was immediately subjected to rapid mixing and incubated for 30 minutes at 274K.
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 295
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS3 6M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2016-06-04
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator Si
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.918
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'PETRA III, DESY BEAMLINE P11'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.918
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline P11
_diffrn_source.pdbx_synchrotron_site 'PETRA III, DESY'
#
_reflns.B_iso_Wilson_estimate 25.77
_reflns.entry_id 5NJR
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.70
_reflns.d_resolution_low 22.681
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 14040
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 100
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 4932
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 16.65
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.99
_reflns.pdbx_R_split 0.0349
#
_reflns_shell.d_res_high 1.70
_reflns_shell.d_res_low 1.761
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 1.06
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 1352
_reflns_shell.percent_possible_all 100
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 267
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half 0.39
_reflns_shell.pdbx_R_split 1.1245
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean ?
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 5NJR
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.700
_refine.ls_d_res_low 22.681
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 14016
_refine.ls_number_reflns_R_free 1403
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.83
_refine.ls_percent_reflns_R_free 10.01
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1692
_refine.ls_R_factor_R_free 0.1975
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1661
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.33
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 4ET8
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details 'Same as for 5NJQ'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.11
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.90
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 20.77
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.16
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1001
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 47
_refine_hist.number_atoms_solvent 59
_refine_hist.number_atoms_total 1107
_refine_hist.d_res_high 1.700
_refine_hist.d_res_low 22.681
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.004 ? 1121 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 0.669 ? 1532 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 9.994 ? 653 ? f_dihedral_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.041 ? 165 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.003 ? 199 ? f_plane_restr ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 1.7001 1.7608 . . 136 1216 100.00 . . . 0.3382 . 0.3219 . . . . . . . . . .
'X-RAY DIFFRACTION' 1.7608 1.8313 . . 137 1238 100.00 . . . 0.3041 . 0.2660 . . . . . . . . . .
'X-RAY DIFFRACTION' 1.8313 1.9146 . . 139 1250 100.00 . . . 0.2540 . 0.2093 . . . . . . . . . .
'X-RAY DIFFRACTION' 1.9146 2.0154 . . 138 1236 100.00 . . . 0.2258 . 0.1845 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.0154 2.1416 . . 137 1237 100.00 . . . 0.2417 . 0.1921 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.1416 2.3068 . . 140 1251 100.00 . . . 0.2210 . 0.1574 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.3068 2.5387 . . 140 1258 100.00 . . . 0.1765 . 0.1611 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.5387 2.9054 . . 140 1260 100.00 . . . 0.1934 . 0.1756 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.9054 3.6580 . . 143 1293 100.00 . . . 0.1872 . 0.1565 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.6580 22.6825 . . 153 1374 100.00 . . . 0.1704 . 0.1421 . . . . . . . . . .
#
_struct.entry_id 5NJR
_struct.title
;Mix-and-diffuse serial synchrotron crystallography: structure of N,N',N''-Triacetylchitotriose bound to Lysozyme with 50s time-delay, phased with 4ET8
;
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 5NJR
_struct_keywords.text 'competitive inhibitor glycoside hydrolase, hydrolase'
_struct_keywords.pdbx_keywords HYDROLASE
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 3 ?
F N N 4 ?
G N N 5 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code LYSC_CHICK
_struct_ref.pdbx_db_accession P00698
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
;
_struct_ref.pdbx_align_begin 19
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 5NJR
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 129
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P00698
_struct_ref_seq.db_align_beg 19
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 147
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 129
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1300 ?
1 MORE -48 ?
1 'SSA (A^2)' 6700 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12
HELX_P HELX_P2 AA2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5
HELX_P HELX_P3 AA3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14
HELX_P HELX_P4 AA4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7
HELX_P HELX_P5 AA5 ILE A 88 ? SER A 100 ? ILE A 88 SER A 100 1 ? 13
HELX_P HELX_P6 AA6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5
HELX_P HELX_P7 AA7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8
HELX_P HELX_P8 AA8 ASP A 119 ? ARG A 125 ? ASP A 119 ARG A 125 5 ? 7
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.016 ? ?
disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.028 ? ?
disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.046 ? ?
disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.032 ? ?
covale1 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.397 sing ?
covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 2 B NAG 3 1_555 ? ? ? ? ? ? ? 1.364 sing ?
metalc1 metalc ? ? A SER 60 O ? ? ? 1_555 F NA . NA ? ? A SER 60 A NA 205 1_555 ? ? ? ? ? ? ? 2.346 ? ?
metalc2 metalc ? ? A CYS 64 O ? ? ? 1_555 F NA . NA ? ? A CYS 64 A NA 205 1_555 ? ? ? ? ? ? ? 2.363 ? ?
metalc3 metalc ? ? A SER 72 OG ? ? ? 1_555 F NA . NA ? ? A SER 72 A NA 205 1_555 ? ? ? ? ? ? ? 2.501 ? ?
metalc4 metalc ? ? A ARG 73 O ? ? ? 1_555 F NA . NA ? ? A ARG 73 A NA 205 1_555 ? ? ? ? ? ? ? 2.511 ? ?
metalc5 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 333 1_555 ? ? ? ? ? ? ? 2.610 ? ?
metalc6 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 355 1_555 ? ? ? ? ? ? ? 2.496 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
metalc ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? A SER 60 ? A SER 60 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? A CYS 64 ? A CYS 64 ? 1_555 85.4 ?
2 O ? A SER 60 ? A SER 60 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 OG ? A SER 72 ? A SER 72 ? 1_555 89.8 ?
3 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 OG ? A SER 72 ? A SER 72 ? 1_555 160.3 ?
4 O ? A SER 60 ? A SER 60 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 95.0 ?
5 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 95.5 ?
6 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? A ARG 73 ? A ARG 73 ? 1_555 103.9 ?
7 O ? A SER 60 ? A SER 60 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 333 ? 1_555 96.1 ?
8 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 333 ? 1_555 86.3 ?
9 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 333 ? 1_555 75.2 ?
10 O ? A ARG 73 ? A ARG 73 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 333 ? 1_555 168.9 ?
11 O ? A SER 60 ? A SER 60 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 355 ? 1_555 172.6 ?
12 O ? A CYS 64 ? A CYS 64 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 355 ? 1_555 98.3 ?
13 OG ? A SER 72 ? A SER 72 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 355 ? 1_555 84.6 ?
14 O ? A ARG 73 ? A ARG 73 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 355 ? 1_555 91.1 ?
15 O ? G HOH . ? A HOH 333 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 355 ? 1_555 77.9 ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 CYS A 6 ? CYS A 127 ? CYS A 6 ? 1_555 CYS A 127 ? 1_555 SG SG . . . None 'Disulfide bridge'
2 CYS A 30 ? CYS A 115 ? CYS A 30 ? 1_555 CYS A 115 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS A 64 ? CYS A 80 ? CYS A 64 ? 1_555 CYS A 80 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS A 76 ? CYS A 94 ? CYS A 76 ? 1_555 CYS A 94 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
_struct_sheet.id AA1
_struct_sheet.type ?
_struct_sheet.number_strands 3
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45
AA1 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53
AA1 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52
AA1 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58
#
_pdbx_entry_details.entry_id 5NJR
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 HH11 A ARG 14 ? ? O A HOH 301 ? ? 1.44
2 1 NH1 A ARG 14 ? ? O A HOH 301 ? ? 1.92
3 1 O A HOH 357 ? ? O A HOH 359 ? ? 2.08
4 1 O A HOH 332 ? ? O A HOH 346 ? ? 2.14
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ARG
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 68
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -143.28
_pdbx_validate_torsion.psi 23.58
#
_pdbx_molecule_features.prd_id PRD_900017
_pdbx_molecule_features.name triacetyl-beta-chitotriose
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Inhibitor
_pdbx_molecule_features.details oligosaccharide
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900017
_pdbx_molecule.asym_id B
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 345 ? G HOH .
2 1 A HOH 350 ? G HOH .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CL CL CL N N 74
CYS N N N N 75
CYS CA C N R 76
CYS C C N N 77
CYS O O N N 78
CYS CB C N N 79
CYS SG S N N 80
CYS OXT O N N 81
CYS H H N N 82
CYS H2 H N N 83
CYS HA H N N 84
CYS HB2 H N N 85
CYS HB3 H N N 86
CYS HG H N N 87
CYS HXT H N N 88
GLN N N N N 89
GLN CA C N S 90
GLN C C N N 91
GLN O O N N 92
GLN CB C N N 93
GLN CG C N N 94
GLN CD C N N 95
GLN OE1 O N N 96
GLN NE2 N N N 97
GLN OXT O N N 98
GLN H H N N 99
GLN H2 H N N 100
GLN HA H N N 101
GLN HB2 H N N 102
GLN HB3 H N N 103
GLN HG2 H N N 104
GLN HG3 H N N 105
GLN HE21 H N N 106
GLN HE22 H N N 107
GLN HXT H N N 108
GLU N N N N 109
GLU CA C N S 110
GLU C C N N 111
GLU O O N N 112
GLU CB C N N 113
GLU CG C N N 114
GLU CD C N N 115
GLU OE1 O N N 116
GLU OE2 O N N 117
GLU OXT O N N 118
GLU H H N N 119
GLU H2 H N N 120
GLU HA H N N 121
GLU HB2 H N N 122
GLU HB3 H N N 123
GLU HG2 H N N 124
GLU HG3 H N N 125
GLU HE2 H N N 126
GLU HXT H N N 127
GLY N N N N 128
GLY CA C N N 129
GLY C C N N 130
GLY O O N N 131
GLY OXT O N N 132
GLY H H N N 133
GLY H2 H N N 134
GLY HA2 H N N 135
GLY HA3 H N N 136
GLY HXT H N N 137
HIS N N N N 138
HIS CA C N S 139
HIS C C N N 140
HIS O O N N 141
HIS CB C N N 142
HIS CG C Y N 143
HIS ND1 N Y N 144
HIS CD2 C Y N 145
HIS CE1 C Y N 146
HIS NE2 N Y N 147
HIS OXT O N N 148
HIS H H N N 149
HIS H2 H N N 150
HIS HA H N N 151
HIS HB2 H N N 152
HIS HB3 H N N 153
HIS HD1 H N N 154
HIS HD2 H N N 155
HIS HE1 H N N 156
HIS HE2 H N N 157
HIS HXT H N N 158
HOH O O N N 159
HOH H1 H N N 160
HOH H2 H N N 161
ILE N N N N 162
ILE CA C N S 163
ILE C C N N 164
ILE O O N N 165
ILE CB C N S 166
ILE CG1 C N N 167
ILE CG2 C N N 168
ILE CD1 C N N 169
ILE OXT O N N 170
ILE H H N N 171
ILE H2 H N N 172
ILE HA H N N 173
ILE HB H N N 174
ILE HG12 H N N 175
ILE HG13 H N N 176
ILE HG21 H N N 177
ILE HG22 H N N 178
ILE HG23 H N N 179
ILE HD11 H N N 180
ILE HD12 H N N 181
ILE HD13 H N N 182
ILE HXT H N N 183
LEU N N N N 184
LEU CA C N S 185
LEU C C N N 186
LEU O O N N 187
LEU CB C N N 188
LEU CG C N N 189
LEU CD1 C N N 190
LEU CD2 C N N 191
LEU OXT O N N 192
LEU H H N N 193
LEU H2 H N N 194
LEU HA H N N 195
LEU HB2 H N N 196
LEU HB3 H N N 197
LEU HG H N N 198
LEU HD11 H N N 199
LEU HD12 H N N 200
LEU HD13 H N N 201
LEU HD21 H N N 202
LEU HD22 H N N 203
LEU HD23 H N N 204
LEU HXT H N N 205
LYS N N N N 206
LYS CA C N S 207
LYS C C N N 208
LYS O O N N 209
LYS CB C N N 210
LYS CG C N N 211
LYS CD C N N 212
LYS CE C N N 213
LYS NZ N N N 214
LYS OXT O N N 215
LYS H H N N 216
LYS H2 H N N 217
LYS HA H N N 218
LYS HB2 H N N 219
LYS HB3 H N N 220
LYS HG2 H N N 221
LYS HG3 H N N 222
LYS HD2 H N N 223
LYS HD3 H N N 224
LYS HE2 H N N 225
LYS HE3 H N N 226
LYS HZ1 H N N 227
LYS HZ2 H N N 228
LYS HZ3 H N N 229
LYS HXT H N N 230
MET N N N N 231
MET CA C N S 232
MET C C N N 233
MET O O N N 234
MET CB C N N 235
MET CG C N N 236
MET SD S N N 237
MET CE C N N 238
MET OXT O N N 239
MET H H N N 240
MET H2 H N N 241
MET HA H N N 242
MET HB2 H N N 243
MET HB3 H N N 244
MET HG2 H N N 245
MET HG3 H N N 246
MET HE1 H N N 247
MET HE2 H N N 248
MET HE3 H N N 249
MET HXT H N N 250
NA NA NA N N 251
NAG C1 C N R 252
NAG C2 C N R 253
NAG C3 C N R 254
NAG C4 C N S 255
NAG C5 C N R 256
NAG C6 C N N 257
NAG C7 C N N 258
NAG C8 C N N 259
NAG N2 N N N 260
NAG O1 O N N 261
NAG O3 O N N 262
NAG O4 O N N 263
NAG O5 O N N 264
NAG O6 O N N 265
NAG O7 O N N 266
NAG H1 H N N 267
NAG H2 H N N 268
NAG H3 H N N 269
NAG H4 H N N 270
NAG H5 H N N 271
NAG H61 H N N 272
NAG H62 H N N 273
NAG H81 H N N 274
NAG H82 H N N 275
NAG H83 H N N 276
NAG HN2 H N N 277
NAG HO1 H N N 278
NAG HO3 H N N 279
NAG HO4 H N N 280
NAG HO6 H N N 281
PHE N N N N 282
PHE CA C N S 283
PHE C C N N 284
PHE O O N N 285
PHE CB C N N 286
PHE CG C Y N 287
PHE CD1 C Y N 288
PHE CD2 C Y N 289
PHE CE1 C Y N 290
PHE CE2 C Y N 291
PHE CZ C Y N 292
PHE OXT O N N 293
PHE H H N N 294
PHE H2 H N N 295
PHE HA H N N 296
PHE HB2 H N N 297
PHE HB3 H N N 298
PHE HD1 H N N 299
PHE HD2 H N N 300
PHE HE1 H N N 301
PHE HE2 H N N 302
PHE HZ H N N 303
PHE HXT H N N 304
PRO N N N N 305
PRO CA C N S 306
PRO C C N N 307
PRO O O N N 308
PRO CB C N N 309
PRO CG C N N 310
PRO CD C N N 311
PRO OXT O N N 312
PRO H H N N 313
PRO HA H N N 314
PRO HB2 H N N 315
PRO HB3 H N N 316
PRO HG2 H N N 317
PRO HG3 H N N 318
PRO HD2 H N N 319
PRO HD3 H N N 320
PRO HXT H N N 321
SER N N N N 322
SER CA C N S 323
SER C C N N 324
SER O O N N 325
SER CB C N N 326
SER OG O N N 327
SER OXT O N N 328
SER H H N N 329
SER H2 H N N 330
SER HA H N N 331
SER HB2 H N N 332
SER HB3 H N N 333
SER HG H N N 334
SER HXT H N N 335
THR N N N N 336
THR CA C N S 337
THR C C N N 338
THR O O N N 339
THR CB C N R 340
THR OG1 O N N 341
THR CG2 C N N 342
THR OXT O N N 343
THR H H N N 344
THR H2 H N N 345
THR HA H N N 346
THR HB H N N 347
THR HG1 H N N 348
THR HG21 H N N 349
THR HG22 H N N 350
THR HG23 H N N 351
THR HXT H N N 352
TRP N N N N 353
TRP CA C N S 354
TRP C C N N 355
TRP O O N N 356
TRP CB C N N 357
TRP CG C Y N 358
TRP CD1 C Y N 359
TRP CD2 C Y N 360
TRP NE1 N Y N 361
TRP CE2 C Y N 362
TRP CE3 C Y N 363
TRP CZ2 C Y N 364
TRP CZ3 C Y N 365
TRP CH2 C Y N 366
TRP OXT O N N 367
TRP H H N N 368
TRP H2 H N N 369
TRP HA H N N 370
TRP HB2 H N N 371
TRP HB3 H N N 372
TRP HD1 H N N 373
TRP HE1 H N N 374
TRP HE3 H N N 375
TRP HZ2 H N N 376
TRP HZ3 H N N 377
TRP HH2 H N N 378
TRP HXT H N N 379
TYR N N N N 380
TYR CA C N S 381
TYR C C N N 382
TYR O O N N 383
TYR CB C N N 384
TYR CG C Y N 385
TYR CD1 C Y N 386
TYR CD2 C Y N 387
TYR CE1 C Y N 388
TYR CE2 C Y N 389
TYR CZ C Y N 390
TYR OH O N N 391
TYR OXT O N N 392
TYR H H N N 393
TYR H2 H N N 394
TYR HA H N N 395
TYR HB2 H N N 396
TYR HB3 H N N 397
TYR HD1 H N N 398
TYR HD2 H N N 399
TYR HE1 H N N 400
TYR HE2 H N N 401
TYR HH H N N 402
TYR HXT H N N 403
VAL N N N N 404
VAL CA C N S 405
VAL C C N N 406
VAL O O N N 407
VAL CB C N N 408
VAL CG1 C N N 409
VAL CG2 C N N 410
VAL OXT O N N 411
VAL H H N N 412
VAL H2 H N N 413
VAL HA H N N 414
VAL HB H N N 415
VAL HG11 H N N 416
VAL HG12 H N N 417
VAL HG13 H N N 418
VAL HG21 H N N 419
VAL HG22 H N N 420
VAL HG23 H N N 421
VAL HXT H N N 422
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MET N CA sing N N 218
MET N H sing N N 219
MET N H2 sing N N 220
MET CA C sing N N 221
MET CA CB sing N N 222
MET CA HA sing N N 223
MET C O doub N N 224
MET C OXT sing N N 225
MET CB CG sing N N 226
MET CB HB2 sing N N 227
MET CB HB3 sing N N 228
MET CG SD sing N N 229
MET CG HG2 sing N N 230
MET CG HG3 sing N N 231
MET SD CE sing N N 232
MET CE HE1 sing N N 233
MET CE HE2 sing N N 234
MET CE HE3 sing N N 235
MET OXT HXT sing N N 236
NAG C1 C2 sing N N 237
NAG C1 O1 sing N N 238
NAG C1 O5 sing N N 239
NAG C1 H1 sing N N 240
NAG C2 C3 sing N N 241
NAG C2 N2 sing N N 242
NAG C2 H2 sing N N 243
NAG C3 C4 sing N N 244
NAG C3 O3 sing N N 245
NAG C3 H3 sing N N 246
NAG C4 C5 sing N N 247
NAG C4 O4 sing N N 248
NAG C4 H4 sing N N 249
NAG C5 C6 sing N N 250
NAG C5 O5 sing N N 251
NAG C5 H5 sing N N 252
NAG C6 O6 sing N N 253
NAG C6 H61 sing N N 254
NAG C6 H62 sing N N 255
NAG C7 C8 sing N N 256
NAG C7 N2 sing N N 257
NAG C7 O7 doub N N 258
NAG C8 H81 sing N N 259
NAG C8 H82 sing N N 260
NAG C8 H83 sing N N 261
NAG N2 HN2 sing N N 262
NAG O1 HO1 sing N N 263
NAG O3 HO3 sing N N 264
NAG O4 HO4 sing N N 265
NAG O6 HO6 sing N N 266
PHE N CA sing N N 267
PHE N H sing N N 268
PHE N H2 sing N N 269
PHE CA C sing N N 270
PHE CA CB sing N N 271
PHE CA HA sing N N 272
PHE C O doub N N 273
PHE C OXT sing N N 274
PHE CB CG sing N N 275
PHE CB HB2 sing N N 276
PHE CB HB3 sing N N 277
PHE CG CD1 doub Y N 278
PHE CG CD2 sing Y N 279
PHE CD1 CE1 sing Y N 280
PHE CD1 HD1 sing N N 281
PHE CD2 CE2 doub Y N 282
PHE CD2 HD2 sing N N 283
PHE CE1 CZ doub Y N 284
PHE CE1 HE1 sing N N 285
PHE CE2 CZ sing Y N 286
PHE CE2 HE2 sing N N 287
PHE CZ HZ sing N N 288
PHE OXT HXT sing N N 289
PRO N CA sing N N 290
PRO N CD sing N N 291
PRO N H sing N N 292
PRO CA C sing N N 293
PRO CA CB sing N N 294
PRO CA HA sing N N 295
PRO C O doub N N 296
PRO C OXT sing N N 297
PRO CB CG sing N N 298
PRO CB HB2 sing N N 299
PRO CB HB3 sing N N 300
PRO CG CD sing N N 301
PRO CG HG2 sing N N 302
PRO CG HG3 sing N N 303
PRO CD HD2 sing N N 304
PRO CD HD3 sing N N 305
PRO OXT HXT sing N N 306
SER N CA sing N N 307
SER N H sing N N 308
SER N H2 sing N N 309
SER CA C sing N N 310
SER CA CB sing N N 311
SER CA HA sing N N 312
SER C O doub N N 313
SER C OXT sing N N 314
SER CB OG sing N N 315
SER CB HB2 sing N N 316
SER CB HB3 sing N N 317
SER OG HG sing N N 318
SER OXT HXT sing N N 319
THR N CA sing N N 320
THR N H sing N N 321
THR N H2 sing N N 322
THR CA C sing N N 323
THR CA CB sing N N 324
THR CA HA sing N N 325
THR C O doub N N 326
THR C OXT sing N N 327
THR CB OG1 sing N N 328
THR CB CG2 sing N N 329
THR CB HB sing N N 330
THR OG1 HG1 sing N N 331
THR CG2 HG21 sing N N 332
THR CG2 HG22 sing N N 333
THR CG2 HG23 sing N N 334
THR OXT HXT sing N N 335
TRP N CA sing N N 336
TRP N H sing N N 337
TRP N H2 sing N N 338
TRP CA C sing N N 339
TRP CA CB sing N N 340
TRP CA HA sing N N 341
TRP C O doub N N 342
TRP C OXT sing N N 343
TRP CB CG sing N N 344
TRP CB HB2 sing N N 345
TRP CB HB3 sing N N 346
TRP CG CD1 doub Y N 347
TRP CG CD2 sing Y N 348
TRP CD1 NE1 sing Y N 349
TRP CD1 HD1 sing N N 350
TRP CD2 CE2 doub Y N 351
TRP CD2 CE3 sing Y N 352
TRP NE1 CE2 sing Y N 353
TRP NE1 HE1 sing N N 354
TRP CE2 CZ2 sing Y N 355
TRP CE3 CZ3 doub Y N 356
TRP CE3 HE3 sing N N 357
TRP CZ2 CH2 doub Y N 358
TRP CZ2 HZ2 sing N N 359
TRP CZ3 CH2 sing Y N 360
TRP CZ3 HZ3 sing N N 361
TRP CH2 HH2 sing N N 362
TRP OXT HXT sing N N 363
TYR N CA sing N N 364
TYR N H sing N N 365
TYR N H2 sing N N 366
TYR CA C sing N N 367
TYR CA CB sing N N 368
TYR CA HA sing N N 369
TYR C O doub N N 370
TYR C OXT sing N N 371
TYR CB CG sing N N 372
TYR CB HB2 sing N N 373
TYR CB HB3 sing N N 374
TYR CG CD1 doub Y N 375
TYR CG CD2 sing Y N 376
TYR CD1 CE1 sing Y N 377
TYR CD1 HD1 sing N N 378
TYR CD2 CE2 doub Y N 379
TYR CD2 HD2 sing N N 380
TYR CE1 CZ doub Y N 381
TYR CE1 HE1 sing N N 382
TYR CE2 CZ sing Y N 383
TYR CE2 HE2 sing N N 384
TYR CZ OH sing N N 385
TYR OH HH sing N N 386
TYR OXT HXT sing N N 387
VAL N CA sing N N 388
VAL N H sing N N 389
VAL N H2 sing N N 390
VAL CA C sing N N 391
VAL CA CB sing N N 392
VAL CA HA sing N N 393
VAL C O doub N N 394
VAL C OXT sing N N 395
VAL CB CG1 sing N N 396
VAL CB CG2 sing N N 397
VAL CB HB sing N N 398
VAL CG1 HG11 sing N N 399
VAL CG1 HG12 sing N N 400
VAL CG1 HG13 sing N N 401
VAL CG2 HG21 sing N N 402
VAL CG2 HG22 sing N N 403
VAL CG2 HG23 sing N N 404
VAL OXT HXT sing N N 405
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 NAG 2 n
2 NAG 3 n
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4ET8
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 5NJR
_atom_sites.fract_transf_matrix[1][1] 0.012561
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012561
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.026110
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
H
N
NA
O
S
#
loop_