HEADER TRANSPORT PROTEIN 13-APR-17 5NP4 TITLE BETA DOMAIN OF HUMAN TRANSCOBALAMIN BOUND TO CYANOCOBALAMIN CAVEAT 5NP4 CNC A 502 HAS WRONG CHIRALITY AT ATOM C19 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCOBALAMIN-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYANOCOBALAMIN-BOUND BETA DOMAIN, UNP RESIDUES 325-427; COMPND 5 SYNONYM: TC-2,TRANSCOBALAMIN II,TCII; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TCN2, TC2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TRANSCOBALAMIN, TC-BETA, VITAMIN B12, CYANOCOBALAMIN, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.S.BLOCH,K.P.LOCHER REVDAT 3 25-AUG-21 5NP4 1 CAVEAT COMPND HETNAM FORMUL REVDAT 3 2 1 LINK REVDAT 2 16-OCT-19 5NP4 1 REMARK REVDAT 1 27-SEP-17 5NP4 0 JRNL AUTH J.S.BLOCH,M.RUETZ,B.KRAUTLER,K.P.LOCHER JRNL TITL STRUCTURE OF THE HUMAN TRANSCOBALAMIN BETA DOMAIN IN FOUR JRNL TITL 2 DISTINCT STATES. JRNL REF PLOS ONE V. 12 84932 2017 JRNL REFN ESSN 1932-6203 JRNL PMID 28910388 JRNL DOI 10.1371/JOURNAL.PONE.0184932 REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 51297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7559 - 3.7580 1.00 2731 146 0.1542 0.1785 REMARK 3 2 3.7580 - 2.9831 1.00 2719 137 0.1459 0.1806 REMARK 3 3 2.9831 - 2.6061 1.00 2746 144 0.1491 0.1931 REMARK 3 4 2.6061 - 2.3678 1.00 2727 145 0.1410 0.1855 REMARK 3 5 2.3678 - 2.1981 1.00 2735 145 0.1340 0.1722 REMARK 3 6 2.1981 - 2.0685 1.00 2730 138 0.1342 0.1893 REMARK 3 7 2.0685 - 1.9649 1.00 2710 143 0.1297 0.1577 REMARK 3 8 1.9649 - 1.8794 1.00 2716 149 0.1371 0.1597 REMARK 3 9 1.8794 - 1.8070 1.00 2771 146 0.1522 0.2404 REMARK 3 10 1.8070 - 1.7447 0.99 2711 142 0.1652 0.2148 REMARK 3 11 1.7447 - 1.6901 0.99 2727 142 0.1739 0.2290 REMARK 3 12 1.6901 - 1.6418 1.00 2686 137 0.1957 0.2248 REMARK 3 13 1.6418 - 1.5986 0.99 2730 139 0.2136 0.2163 REMARK 3 14 1.5986 - 1.5596 0.99 2667 140 0.2380 0.2507 REMARK 3 15 1.5596 - 1.5241 0.99 2725 146 0.2875 0.3342 REMARK 3 16 1.5241 - 1.4917 0.98 2689 141 0.3179 0.3466 REMARK 3 17 1.4917 - 1.4619 0.98 2666 141 0.3162 0.3874 REMARK 3 18 1.4619 - 1.4343 0.95 2556 134 0.3381 0.3401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.034 1042 REMARK 3 ANGLE : 4.039 1458 REMARK 3 CHIRALITY : 0.640 158 REMARK 3 PLANARITY : 0.015 182 REMARK 3 DIHEDRAL : 19.283 393 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-17. REMARK 100 THE DEPOSITION ID IS D_1200004438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 257023 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M MG FORMATE DIHYDRATE, 22.5% W/V REMARK 280 POLYETHYLENE GLYCOL 1000, VAPOR DIFFUSION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.38267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.19133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.19133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.38267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 613 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 712 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 302 REMARK 465 VAL A 303 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 346 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 708 O HOH A 716 2.12 REMARK 500 O HOH A 745 O HOH A 753 2.19 REMARK 500 O HOH A 604 O HOH A 665 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 606 O HOH A 754 6554 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 384 52.42 38.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 754 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 755 DISTANCE = 7.39 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CNC A 502 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CNC A 502 N3B REMARK 620 2 CNC A 502 N21 89.5 REMARK 620 3 CNC A 502 N22 89.2 91.4 REMARK 620 4 CNC A 502 N23 87.9 174.1 93.9 REMARK 620 5 CNC A 502 N24 93.3 82.2 173.0 92.7 REMARK 620 6 CNC A 502 C1A 177.1 92.5 88.6 90.2 89.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CNC A 502 DBREF 5NP4 A 307 409 UNP P20062 TCO2_HUMAN 325 427 SEQADV 5NP4 GLY A 302 UNP P20062 EXPRESSION TAG SEQADV 5NP4 VAL A 303 UNP P20062 EXPRESSION TAG SEQADV 5NP4 ASP A 304 UNP P20062 EXPRESSION TAG SEQADV 5NP4 HIS A 305 UNP P20062 EXPRESSION TAG SEQADV 5NP4 MET A 306 UNP P20062 EXPRESSION TAG SEQRES 1 A 108 GLY VAL ASP HIS MET GLN THR GLN GLU ILE ILE SER VAL SEQRES 2 A 108 THR LEU GLN VAL LEU SER LEU LEU PRO PRO TYR ARG GLN SEQRES 3 A 108 SER ILE SER VAL LEU ALA GLY SER THR VAL GLU ASP VAL SEQRES 4 A 108 LEU LYS LYS ALA HIS GLU LEU GLY GLY PHE THR TYR GLU SEQRES 5 A 108 THR GLN ALA SER LEU SER GLY PRO TYR LEU THR SER VAL SEQRES 6 A 108 MET GLY LYS ALA ALA GLY GLU ARG GLU PHE TRP GLN LEU SEQRES 7 A 108 LEU ARG ASP PRO ASN THR PRO LEU LEU GLN GLY ILE ALA SEQRES 8 A 108 ASP TYR ARG PRO LYS ASP GLY GLU THR ILE GLU LEU ARG SEQRES 9 A 108 LEU VAL SER TRP HET GOL A 501 14 HET CNC A 502 93 HETNAM GOL GLYCEROL HETNAM CNC CYANOCOBALAMIN HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 CNC C63 H89 CO N14 O14 P 2+ FORMUL 4 HOH *155(H2 O) HELIX 1 AA1 THR A 336 LEU A 347 1 12 SHEET 1 AA1 5 TYR A 325 LEU A 332 0 SHEET 2 AA1 5 ILE A 311 VAL A 318 -1 N ILE A 312 O VAL A 331 SHEET 3 AA1 5 THR A 401 SER A 408 1 O ILE A 402 N THR A 315 SHEET 4 AA1 5 GLU A 375 ARG A 381 -1 N GLN A 378 O ARG A 405 SHEET 5 AA1 5 THR A 385 PRO A 386 -1 O THR A 385 N ARG A 381 SHEET 1 AA2 3 TYR A 352 SER A 357 0 SHEET 2 AA2 3 GLY A 360 VAL A 366 -1 O THR A 364 N GLU A 353 SHEET 3 AA2 3 LYS A 369 ALA A 370 -1 O LYS A 369 N VAL A 366 LINK CO CNC A 502 N3B CNC A 502 1555 1555 2.22 CISPEP 1 LEU A 322 PRO A 323 0 -3.17 CISPEP 2 LEU A 322 PRO A 323 0 -3.21 CISPEP 3 ASP A 382 PRO A 383 0 3.29 SITE 1 AC1 7 TYR A 362 CNC A 502 HOH A 630 HOH A 644 SITE 2 AC1 7 HOH A 646 HOH A 675 HOH A 724 SITE 1 AC2 22 GLN A 307 SER A 357 SER A 359 GLY A 360 SITE 2 AC2 22 PRO A 361 TYR A 362 LEU A 363 TRP A 377 SITE 3 AC2 22 GLN A 378 LEU A 379 LEU A 387 LEU A 388 SITE 4 AC2 22 GLN A 389 GLY A 390 GOL A 501 HOH A 601 SITE 5 AC2 22 HOH A 619 HOH A 629 HOH A 667 HOH A 688 SITE 6 AC2 22 HOH A 694 HOH A 736 CRYST1 60.239 60.239 69.574 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016601 0.009584 0.000000 0.00000 SCALE2 0.000000 0.019169 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014373 0.00000