HEADER CHAPERONE 25-APR-17 5NRO TITLE STRUCTURE OF FULL-LENGTH DNAK WITH BOUND J-DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN DNAK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSP70,HEAT SHOCK 70 KDA PROTEIN,HEAT SHOCK PROTEIN 70; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CHAPERONE PROTEIN DNAJ; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: HSP40,HEAT SHOCK PROTEIN J; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DNAK, GROP, GRPF, SEG, B0014, JW0013; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 9 ORGANISM_TAXID: 562; SOURCE 10 GENE: DNAJ, GROP, B0015, JW0014; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNAK, DNAJ, CHAPERONE, HSP70, HSP40 EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPP,R.KITYK,M.P.MAYER REVDAT 3 17-JAN-24 5NRO 1 REMARK REVDAT 2 31-JAN-18 5NRO 1 JRNL REVDAT 1 17-JAN-18 5NRO 0 JRNL AUTH R.KITYK,J.KOPP,M.P.MAYER JRNL TITL MOLECULAR MECHANISM OF J-DOMAIN-TRIGGERED ATP HYDROLYSIS BY JRNL TITL 2 HSP70 CHAPERONES. JRNL REF MOL. CELL V. 69 227 2018 JRNL REFN ISSN 1097-4164 JRNL PMID 29290615 JRNL DOI 10.1016/J.MOLCEL.2017.12.003 REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 19808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1251 - 6.2129 1.00 2901 154 0.1763 0.1889 REMARK 3 2 6.2129 - 4.9332 1.00 2705 156 0.2131 0.2282 REMARK 3 3 4.9332 - 4.3101 1.00 2695 131 0.2038 0.2378 REMARK 3 4 4.3101 - 3.9163 1.00 2655 136 0.2119 0.2340 REMARK 3 5 3.9163 - 3.6357 1.00 2617 144 0.2575 0.2778 REMARK 3 6 3.6357 - 3.4214 1.00 2632 134 0.2983 0.3301 REMARK 3 7 3.4214 - 3.2501 1.00 2629 119 0.3560 0.3714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5200 REMARK 3 ANGLE : 0.647 7016 REMARK 3 CHIRALITY : 0.043 811 REMARK 3 PLANARITY : 0.003 924 REMARK 3 DIHEDRAL : 11.703 3236 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8749 16.1723 -29.0949 REMARK 3 T TENSOR REMARK 3 T11: 1.0002 T22: 0.9292 REMARK 3 T33: 0.9794 T12: 0.0526 REMARK 3 T13: 0.0607 T23: -0.0731 REMARK 3 L TENSOR REMARK 3 L11: 2.8870 L22: 5.5893 REMARK 3 L33: 4.8800 L12: 0.6368 REMARK 3 L13: -0.8141 L23: 1.1593 REMARK 3 S TENSOR REMARK 3 S11: 0.0695 S12: 0.1635 S13: -0.2997 REMARK 3 S21: -0.1938 S22: 0.0533 S23: -0.1996 REMARK 3 S31: 0.4016 S32: 0.1665 S33: -0.2243 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4167 30.7065 -23.9073 REMARK 3 T TENSOR REMARK 3 T11: 0.9096 T22: 1.1066 REMARK 3 T33: 0.9829 T12: -0.1186 REMARK 3 T13: 0.1691 T23: -0.0769 REMARK 3 L TENSOR REMARK 3 L11: 2.0699 L22: 5.7370 REMARK 3 L33: 3.4198 L12: -0.5892 REMARK 3 L13: 0.5976 L23: 1.3209 REMARK 3 S TENSOR REMARK 3 S11: 0.2604 S12: -0.0206 S13: 0.4546 REMARK 3 S21: -0.2248 S22: -0.1062 S23: -0.7791 REMARK 3 S31: -0.3204 S32: 0.7589 S33: -0.2257 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 327 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8118 22.7915 -25.1984 REMARK 3 T TENSOR REMARK 3 T11: 1.0436 T22: 0.7660 REMARK 3 T33: 0.8759 T12: -0.0811 REMARK 3 T13: 0.1807 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 4.2522 L22: 3.2619 REMARK 3 L33: 1.9188 L12: 2.2295 REMARK 3 L13: 0.8034 L23: 0.3455 REMARK 3 S TENSOR REMARK 3 S11: 0.3320 S12: -0.1939 S13: -0.0397 REMARK 3 S21: -0.0682 S22: -0.1193 S23: 0.0508 REMARK 3 S31: 0.2935 S32: 0.0409 S33: -0.0841 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 328 THROUGH 369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3146 41.7727 -21.2029 REMARK 3 T TENSOR REMARK 3 T11: 1.1760 T22: 0.8785 REMARK 3 T33: 1.1891 T12: -0.1156 REMARK 3 T13: 0.2088 T23: -0.0972 REMARK 3 L TENSOR REMARK 3 L11: 6.2636 L22: 4.9433 REMARK 3 L33: 3.5134 L12: 3.0566 REMARK 3 L13: 3.0281 L23: 1.5367 REMARK 3 S TENSOR REMARK 3 S11: 0.0870 S12: 0.2094 S13: 1.2741 REMARK 3 S21: 0.0624 S22: 0.0954 S23: 0.2781 REMARK 3 S31: -0.7378 S32: 0.4820 S33: 0.0855 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 370 THROUGH 508 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7743 22.3997 -2.6395 REMARK 3 T TENSOR REMARK 3 T11: 1.1044 T22: 1.4956 REMARK 3 T33: 1.0242 T12: -0.0217 REMARK 3 T13: -0.0010 T23: -0.1338 REMARK 3 L TENSOR REMARK 3 L11: 2.5862 L22: 5.0206 REMARK 3 L33: 2.3055 L12: -0.8246 REMARK 3 L13: 0.6140 L23: -1.2439 REMARK 3 S TENSOR REMARK 3 S11: -0.1910 S12: -0.6245 S13: -0.1719 REMARK 3 S21: 0.9057 S22: 0.1129 S23: -0.7239 REMARK 3 S31: 0.0321 S32: 0.8781 S33: -0.0522 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 509 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2488 9.9581 -48.9870 REMARK 3 T TENSOR REMARK 3 T11: 0.9628 T22: 1.1337 REMARK 3 T33: 1.2242 T12: -0.0088 REMARK 3 T13: 0.1649 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 2.3876 L22: 2.9107 REMARK 3 L33: 3.2938 L12: -1.2334 REMARK 3 L13: 1.6488 L23: -0.3271 REMARK 3 S TENSOR REMARK 3 S11: -0.5602 S12: -0.0967 S13: 0.1468 REMARK 3 S21: 0.2509 S22: -0.1732 S23: -0.5476 REMARK 3 S31: -0.0021 S32: 0.7466 S33: 0.5244 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 554 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6992 3.3938 -69.7612 REMARK 3 T TENSOR REMARK 3 T11: 1.2741 T22: 1.0949 REMARK 3 T33: 1.0958 T12: 0.0202 REMARK 3 T13: 0.1523 T23: -0.1418 REMARK 3 L TENSOR REMARK 3 L11: 3.7911 L22: 3.6399 REMARK 3 L33: 2.9608 L12: -0.3235 REMARK 3 L13: 1.9487 L23: 1.1943 REMARK 3 S TENSOR REMARK 3 S11: 0.2916 S12: 0.6850 S13: 0.1382 REMARK 3 S21: -0.3705 S22: -0.0485 S23: -0.4619 REMARK 3 S31: 0.3486 S32: 0.3939 S33: -0.2329 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.7177 44.2103 2.6541 REMARK 3 T TENSOR REMARK 3 T11: 2.0917 T22: 1.6477 REMARK 3 T33: 1.8132 T12: -0.1384 REMARK 3 T13: -0.0316 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: -0.0064 L22: 0.2350 REMARK 3 L33: 0.0518 L12: -0.0517 REMARK 3 L13: 0.0287 L23: -0.1238 REMARK 3 S TENSOR REMARK 3 S11: -0.5478 S12: -1.0775 S13: 1.4142 REMARK 3 S21: 0.7833 S22: 0.1502 S23: -0.0818 REMARK 3 S31: -0.9291 S32: 0.6516 S33: -0.1054 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7870 53.7996 3.4084 REMARK 3 T TENSOR REMARK 3 T11: 2.4959 T22: 2.1421 REMARK 3 T33: 2.1931 T12: 0.0353 REMARK 3 T13: -0.0851 T23: -0.3376 REMARK 3 L TENSOR REMARK 3 L11: 0.0101 L22: 0.0003 REMARK 3 L33: 0.1023 L12: -0.0067 REMARK 3 L13: -0.0270 L23: 0.0050 REMARK 3 S TENSOR REMARK 3 S11: 0.2408 S12: 0.2467 S13: 1.5889 REMARK 3 S21: -0.3043 S22: 0.8620 S23: -0.0674 REMARK 3 S31: -0.5973 S32: 0.4779 S33: 0.2104 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7317 44.2769 -11.0391 REMARK 3 T TENSOR REMARK 3 T11: 2.1610 T22: 1.8337 REMARK 3 T33: 2.1551 T12: -0.2032 REMARK 3 T13: 0.2632 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.0027 L22: 0.5387 REMARK 3 L33: 0.5393 L12: -0.0356 REMARK 3 L13: 0.0110 L23: -0.5831 REMARK 3 S TENSOR REMARK 3 S11: 0.8087 S12: 0.9069 S13: 0.6805 REMARK 3 S21: 0.0814 S22: -0.1374 S23: -3.1286 REMARK 3 S31: -0.2322 S32: 0.8900 S33: -0.0130 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.6065 38.2259 -4.4138 REMARK 3 T TENSOR REMARK 3 T11: 2.1063 T22: 2.3102 REMARK 3 T33: 1.6872 T12: 0.0768 REMARK 3 T13: 0.0701 T23: -0.2802 REMARK 3 L TENSOR REMARK 3 L11: 1.4980 L22: 5.8180 REMARK 3 L33: 5.4750 L12: 2.9275 REMARK 3 L13: 2.8428 L23: 5.5599 REMARK 3 S TENSOR REMARK 3 S11: 0.2045 S12: 1.0765 S13: 1.0731 REMARK 3 S21: 1.2149 S22: 0.4193 S23: -1.5800 REMARK 3 S31: -0.9283 S32: 1.7106 S33: -1.3180 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 59 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9800 44.9055 9.0342 REMARK 3 T TENSOR REMARK 3 T11: 3.3099 T22: 1.8539 REMARK 3 T33: 2.2956 T12: -0.7396 REMARK 3 T13: 0.7735 T23: -0.4195 REMARK 3 L TENSOR REMARK 3 L11: 0.0341 L22: 0.1035 REMARK 3 L33: 0.2468 L12: 0.0298 REMARK 3 L13: -0.0999 L23: -0.0238 REMARK 3 S TENSOR REMARK 3 S11: 1.5895 S12: -0.9921 S13: 1.2473 REMARK 3 S21: 0.9916 S22: 0.3187 S23: 0.8871 REMARK 3 S31: -2.5276 S32: -1.0095 S33: -0.7525 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NRO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-17. REMARK 100 THE DEPOSITION ID IS D_1200004603. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.872899 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19859 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 46.121 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4B9Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% W/V PEG 8000 0.1M CALCIUM ACETATE REMARK 280 0.1 M IMIDAZOLE PH 6.5 PROTEIN AT 18 MG/ML CRYSTALIZATION DROP REMARK 280 CONTAINED 200 NL PROTEIN + 100 NL RESERVOIR SOLUTION, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 168.59000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.29500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 168.59000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 84.29500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 168.59000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 84.29500 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 168.59000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 84.29500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 605 REMARK 465 HIS A 606 REMARK 465 HIS A 607 REMARK 465 HIS A 608 REMARK 465 HIS A 609 REMARK 465 HIS A 610 REMARK 465 HIS A 611 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 TYR B 66 REMARK 465 ASP B 67 REMARK 465 GLN B 68 REMARK 465 TYR B 69 REMARK 465 GLY B 70 REMARK 465 HIS B 71 REMARK 465 ALA B 72 REMARK 465 ALA B 73 REMARK 465 PHE B 74 REMARK 465 GLU B 75 REMARK 465 GLN B 76 REMARK 465 GLY B 77 REMARK 465 GLY B 78 REMARK 465 MET B 79 REMARK 465 GLY B 80 REMARK 465 GLY B 81 REMARK 465 GLY B 82 REMARK 465 GLY B 83 REMARK 465 PHE B 84 REMARK 465 GLY B 85 REMARK 465 GLY B 86 REMARK 465 GLY B 87 REMARK 465 ALA B 88 REMARK 465 ASP B 89 REMARK 465 PHE B 90 REMARK 465 SER B 91 REMARK 465 ASP B 92 REMARK 465 ILE B 93 REMARK 465 PHE B 94 REMARK 465 GLY B 95 REMARK 465 ASP B 96 REMARK 465 VAL B 97 REMARK 465 PHE B 98 REMARK 465 GLY B 99 REMARK 465 ASP B 100 REMARK 465 ILE B 101 REMARK 465 PHE B 102 REMARK 465 GLY B 103 REMARK 465 GLY B 104 REMARK 465 GLY B 105 REMARK 465 SER B 106 REMARK 465 SER B 107 REMARK 465 HIS B 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG A 701 O HOH A 802 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 22 -13.37 76.68 REMARK 500 SER A 38 59.96 -94.09 REMARK 500 LYS A 556 46.34 -84.85 REMARK 500 LYS B 14 -12.50 77.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 700 O1G REMARK 620 2 ATP A 700 O2B 62.1 REMARK 620 3 HOH A 801 O 102.9 154.6 REMARK 620 4 HOH A 803 O 81.7 79.5 78.0 REMARK 620 5 HOH A 804 O 150.9 95.2 90.6 76.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 701 DBREF 5NRO A 1 605 UNP P0A6Y8 DNAK_ECOLI 1 605 DBREF 5NRO B 1 105 UNP P08622 DNAJ_ECOLI 1 105 SEQADV 5NRO CYS A 47 UNP P0A6Y8 GLU 47 ENGINEERED MUTATION SEQADV 5NRO ALA A 199 UNP P0A6Y8 THR 199 ENGINEERED MUTATION SEQADV 5NRO CYS A 529 UNP P0A6Y8 PHE 529 ENGINEERED MUTATION SEQADV 5NRO HIS A 606 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO HIS A 607 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO HIS A 608 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO HIS A 609 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO HIS A 610 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO HIS A 611 UNP P0A6Y8 EXPRESSION TAG SEQADV 5NRO SER B 106 UNP P08622 EXPRESSION TAG SEQADV 5NRO SER B 107 UNP P08622 EXPRESSION TAG SEQADV 5NRO HIS B 108 UNP P08622 EXPRESSION TAG SEQRES 1 A 611 MET GLY LYS ILE ILE GLY ILE ASP LEU GLY THR THR ASN SEQRES 2 A 611 SER CYS VAL ALA ILE MET ASP GLY THR THR PRO ARG VAL SEQRES 3 A 611 LEU GLU ASN ALA GLU GLY ASP ARG THR THR PRO SER ILE SEQRES 4 A 611 ILE ALA TYR THR GLN ASP GLY CYS THR LEU VAL GLY GLN SEQRES 5 A 611 PRO ALA LYS ARG GLN ALA VAL THR ASN PRO GLN ASN THR SEQRES 6 A 611 LEU PHE ALA ILE LYS ARG LEU ILE GLY ARG ARG PHE GLN SEQRES 7 A 611 ASP GLU GLU VAL GLN ARG ASP VAL SER ILE MET PRO PHE SEQRES 8 A 611 LYS ILE ILE ALA ALA ASP ASN GLY ASP ALA TRP VAL GLU SEQRES 9 A 611 VAL LYS GLY GLN LYS MET ALA PRO PRO GLN ILE SER ALA SEQRES 10 A 611 GLU VAL LEU LYS LYS MET LYS LYS THR ALA GLU ASP TYR SEQRES 11 A 611 LEU GLY GLU PRO VAL THR GLU ALA VAL ILE THR VAL PRO SEQRES 12 A 611 ALA TYR PHE ASN ASP ALA GLN ARG GLN ALA THR LYS ASP SEQRES 13 A 611 ALA GLY ARG ILE ALA GLY LEU GLU VAL LYS ARG ILE ILE SEQRES 14 A 611 ASN GLU PRO THR ALA ALA ALA LEU ALA TYR GLY LEU ASP SEQRES 15 A 611 LYS GLY THR GLY ASN ARG THR ILE ALA VAL TYR ASP LEU SEQRES 16 A 611 GLY GLY GLY ALA PHE ASP ILE SER ILE ILE GLU ILE ASP SEQRES 17 A 611 GLU VAL ASP GLY GLU LYS THR PHE GLU VAL LEU ALA THR SEQRES 18 A 611 ASN GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP SER SEQRES 19 A 611 ARG LEU ILE ASN TYR LEU VAL GLU GLU PHE LYS LYS ASP SEQRES 20 A 611 GLN GLY ILE ASP LEU ARG ASN ASP PRO LEU ALA MET GLN SEQRES 21 A 611 ARG LEU LYS GLU ALA ALA GLU LYS ALA LYS ILE GLU LEU SEQRES 22 A 611 SER SER ALA GLN GLN THR ASP VAL ASN LEU PRO TYR ILE SEQRES 23 A 611 THR ALA ASP ALA THR GLY PRO LYS HIS MET ASN ILE LYS SEQRES 24 A 611 VAL THR ARG ALA LYS LEU GLU SER LEU VAL GLU ASP LEU SEQRES 25 A 611 VAL ASN ARG SER ILE GLU PRO LEU LYS VAL ALA LEU GLN SEQRES 26 A 611 ASP ALA GLY LEU SER VAL SER ASP ILE ASP ASP VAL ILE SEQRES 27 A 611 LEU VAL GLY GLY GLN THR ARG MET PRO MET VAL GLN LYS SEQRES 28 A 611 LYS VAL ALA GLU PHE PHE GLY LYS GLU PRO ARG LYS ASP SEQRES 29 A 611 VAL ASN PRO ASP GLU ALA VAL ALA ILE GLY ALA ALA VAL SEQRES 30 A 611 GLN GLY GLY VAL LEU THR GLY ASP VAL LYS ASP VAL LEU SEQRES 31 A 611 LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE GLU THR SEQRES 32 A 611 MET GLY GLY VAL MET THR THR LEU ILE ALA LYS ASN THR SEQRES 33 A 611 THR ILE PRO THR LYS HIS SER GLN VAL PHE SER THR ALA SEQRES 34 A 611 GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL LEU GLN SEQRES 35 A 611 GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER LEU GLY SEQRES 36 A 611 GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO ARG GLY SEQRES 37 A 611 MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP ALA ASP SEQRES 38 A 611 GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SER GLY SEQRES 39 A 611 LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER GLY LEU SEQRES 40 A 611 ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP ALA GLU SEQRES 41 A 611 ALA ASN ALA GLU ALA ASP ARG LYS CYS GLU GLU LEU VAL SEQRES 42 A 611 GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SER THR SEQRES 43 A 611 ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU PRO ALA SEQRES 44 A 611 ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR ALA LEU SEQRES 45 A 611 GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA ILE GLU SEQRES 46 A 611 ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN LYS LEU SEQRES 47 A 611 MET GLU ILE ALA GLN GLN GLN HIS HIS HIS HIS HIS HIS SEQRES 1 B 108 MET ALA LYS GLN ASP TYR TYR GLU ILE LEU GLY VAL SER SEQRES 2 B 108 LYS THR ALA GLU GLU ARG GLU ILE ARG LYS ALA TYR LYS SEQRES 3 B 108 ARG LEU ALA MET LYS TYR HIS PRO ASP ARG ASN GLN GLY SEQRES 4 B 108 ASP LYS GLU ALA GLU ALA LYS PHE LYS GLU ILE LYS GLU SEQRES 5 B 108 ALA TYR GLU VAL LEU THR ASP SER GLN LYS ARG ALA ALA SEQRES 6 B 108 TYR ASP GLN TYR GLY HIS ALA ALA PHE GLU GLN GLY GLY SEQRES 7 B 108 MET GLY GLY GLY GLY PHE GLY GLY GLY ALA ASP PHE SER SEQRES 8 B 108 ASP ILE PHE GLY ASP VAL PHE GLY ASP ILE PHE GLY GLY SEQRES 9 B 108 GLY SER SER HIS HET ATP A 700 31 HET MG A 701 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *4(H2 O) HELIX 1 AA1 GLY A 51 GLN A 57 1 7 HELIX 2 AA2 ASN A 61 GLN A 63 5 3 HELIX 3 AA3 ALA A 68 LEU A 72 5 5 HELIX 4 AA4 ASP A 79 MET A 89 1 11 HELIX 5 AA5 ALA A 111 GLY A 132 1 22 HELIX 6 AA6 ASN A 147 ALA A 161 1 15 HELIX 7 AA7 GLU A 171 LEU A 181 1 11 HELIX 8 AA8 GLY A 228 GLY A 249 1 22 HELIX 9 AA9 ASP A 255 SER A 274 1 20 HELIX 10 AB1 ARG A 302 SER A 316 1 15 HELIX 11 AB2 ILE A 317 GLY A 328 1 12 HELIX 12 AB3 SER A 330 ILE A 334 5 5 HELIX 13 AB4 GLY A 341 ARG A 345 5 5 HELIX 14 AB5 MET A 346 GLY A 358 1 13 HELIX 15 AB6 GLU A 369 GLY A 384 1 16 HELIX 16 AB7 MET A 404 GLY A 406 5 3 HELIX 17 AB8 ARG A 447 ASN A 451 5 5 HELIX 18 AB9 ASN A 508 GLY A 554 1 47 HELIX 19 AC1 PRO A 558 GLY A 578 1 21 HELIX 20 AC2 ASP A 580 GLN A 603 1 24 HELIX 21 AC3 ASP B 5 GLY B 11 1 7 HELIX 22 AC4 GLU B 17 HIS B 33 1 17 HELIX 23 AC5 HIS B 33 GLN B 38 1 6 HELIX 24 AC6 ASP B 40 ASP B 59 1 20 HELIX 25 AC7 ASP B 59 ALA B 65 1 7 SHEET 1 AA1 3 THR A 23 VAL A 26 0 SHEET 2 AA1 3 ASN A 13 ASP A 20 -1 N ASP A 20 O THR A 23 SHEET 3 AA1 3 THR A 36 PRO A 37 -1 O THR A 36 N SER A 14 SHEET 1 AA2 5 THR A 23 VAL A 26 0 SHEET 2 AA2 5 ASN A 13 ASP A 20 -1 N ASP A 20 O THR A 23 SHEET 3 AA2 5 ILE A 4 ASP A 8 -1 N ASP A 8 O CYS A 15 SHEET 4 AA2 5 GLU A 137 VAL A 142 1 O VAL A 139 N ILE A 7 SHEET 5 AA2 5 GLU A 164 ASN A 170 1 O ILE A 169 N VAL A 142 SHEET 1 AA3 3 THR A 48 VAL A 50 0 SHEET 2 AA3 3 ILE A 40 TYR A 42 -1 N ALA A 41 O LEU A 49 SHEET 3 AA3 3 THR A 65 LEU A 66 -1 O LEU A 66 N ILE A 40 SHEET 1 AA4 3 LYS A 92 ALA A 95 0 SHEET 2 AA4 3 ALA A 101 VAL A 105 -1 O TRP A 102 N ILE A 94 SHEET 3 AA4 3 GLN A 108 MET A 110 -1 O MET A 110 N VAL A 103 SHEET 1 AA5 5 ASP A 336 VAL A 340 0 SHEET 2 AA5 5 ASN A 187 LEU A 195 1 N TYR A 193 O VAL A 340 SHEET 3 AA5 5 PHE A 200 VAL A 210 -1 O ILE A 205 N ILE A 190 SHEET 4 AA5 5 GLU A 213 ASP A 224 -1 O GLU A 217 N GLU A 206 SHEET 5 AA5 5 VAL A 389 LEU A 392 1 O LEU A 392 N PHE A 216 SHEET 1 AA6 2 GLN A 278 ALA A 288 0 SHEET 2 AA6 2 PRO A 293 THR A 301 -1 O LYS A 294 N THR A 287 SHEET 1 AA7 5 MET A 408 ILE A 412 0 SHEET 2 AA7 5 LEU A 399 GLU A 402 -1 N LEU A 399 O ILE A 412 SHEET 3 AA7 5 VAL A 436 GLN A 442 -1 O LEU A 441 N GLY A 400 SHEET 4 AA7 5 LYS A 452 LEU A 459 -1 O LEU A 459 N VAL A 436 SHEET 5 AA7 5 THR A 500 LYS A 502 -1 O THR A 500 N ASN A 458 SHEET 1 AA8 4 THR A 420 PHE A 426 0 SHEET 2 AA8 4 ILE A 472 ILE A 478 -1 O VAL A 474 N GLN A 424 SHEET 3 AA8 4 LEU A 484 ASP A 490 -1 O SER A 487 N THR A 475 SHEET 4 AA8 4 GLU A 496 GLN A 497 -1 O GLN A 497 N ALA A 488 SSBOND 1 CYS A 47 CYS A 529 1555 1555 2.04 LINK O1G ATP A 700 MG MG A 701 1555 1555 2.27 LINK O2B ATP A 700 MG MG A 701 1555 1555 2.15 LINK MG MG A 701 O HOH A 801 1555 1555 2.18 LINK MG MG A 701 O HOH A 803 1555 1555 1.95 LINK MG MG A 701 O HOH A 804 1555 1555 1.96 CISPEP 1 ILE A 418 PRO A 419 0 0.04 SITE 1 AC1 21 GLY A 10 THR A 11 THR A 12 ASN A 13 SITE 2 AC1 21 LYS A 70 GLY A 196 GLY A 197 GLY A 198 SITE 3 AC1 21 ALA A 199 GLY A 229 GLU A 267 LYS A 270 SITE 4 AC1 21 SER A 274 GLY A 341 GLY A 342 GLN A 343 SITE 5 AC1 21 ARG A 345 MG A 701 HOH A 802 HOH A 803 SITE 6 AC1 21 HOH A 804 SITE 1 AC2 6 GLU A 171 ATP A 700 HOH A 801 HOH A 802 SITE 2 AC2 6 HOH A 803 HOH A 804 CRYST1 127.246 127.246 252.885 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007859 0.004537 0.000000 0.00000 SCALE2 0.000000 0.009075 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003954 0.00000