data_5NSA # _entry.id 5NSA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5NSA WWPDB D_1200004635 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5NSA _pdbx_database_status.recvd_initial_deposition_date 2017-04-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bloch, J.S.' 1 ? 'Ruetz, M.' 2 ? 'Krautler, B.' 3 ? 'Locher, K.P.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'PLoS ONE' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first e0184932 _citation.page_last e0184932 _citation.title 'Structure of the human transcobalamin beta domain in four distinct states.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0184932 _citation.pdbx_database_id_PubMed 28910388 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bloch, J.S.' 1 ? primary 'Ruetz, M.' 2 ? primary 'Krautler, B.' 3 ? primary 'Locher, K.P.' 4 ? # _cell.entry_id 5NSA _cell.length_a 61.721 _cell.length_b 62.298 _cell.length_c 33.762 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NSA _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Transcobalamin-2 11969.556 1 ? ? ? ? 2 non-polymer syn COBALAMIN 1330.356 1 ? ? ? ? 3 non-polymer syn 1-ethynyl-2,4-difluorobenzene 138.114 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 water nat water 18.015 236 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TC-2,Transcobalamin II,TCII' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GVDHMQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLLR DPNTPLLQGIADYRPKDGETIELRLVSW ; _entity_poly.pdbx_seq_one_letter_code_can ;GVDHMQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLLR DPNTPLLQGIADYRPKDGETIELRLVSW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 ASP n 1 4 HIS n 1 5 MET n 1 6 GLN n 1 7 THR n 1 8 GLN n 1 9 GLU n 1 10 ILE n 1 11 ILE n 1 12 SER n 1 13 VAL n 1 14 THR n 1 15 LEU n 1 16 GLN n 1 17 VAL n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 LEU n 1 22 PRO n 1 23 PRO n 1 24 TYR n 1 25 ARG n 1 26 GLN n 1 27 SER n 1 28 ILE n 1 29 SER n 1 30 VAL n 1 31 LEU n 1 32 ALA n 1 33 GLY n 1 34 SER n 1 35 THR n 1 36 VAL n 1 37 GLU n 1 38 ASP n 1 39 VAL n 1 40 LEU n 1 41 LYS n 1 42 LYS n 1 43 ALA n 1 44 HIS n 1 45 GLU n 1 46 LEU n 1 47 GLY n 1 48 GLY n 1 49 PHE n 1 50 THR n 1 51 TYR n 1 52 GLU n 1 53 THR n 1 54 GLN n 1 55 ALA n 1 56 SER n 1 57 LEU n 1 58 SER n 1 59 GLY n 1 60 PRO n 1 61 TYR n 1 62 LEU n 1 63 THR n 1 64 SER n 1 65 VAL n 1 66 MET n 1 67 GLY n 1 68 LYS n 1 69 ALA n 1 70 ALA n 1 71 GLY n 1 72 GLU n 1 73 ARG n 1 74 GLU n 1 75 PHE n 1 76 TRP n 1 77 GLN n 1 78 LEU n 1 79 LEU n 1 80 ARG n 1 81 ASP n 1 82 PRO n 1 83 ASN n 1 84 THR n 1 85 PRO n 1 86 LEU n 1 87 LEU n 1 88 GLN n 1 89 GLY n 1 90 ILE n 1 91 ALA n 1 92 ASP n 1 93 TYR n 1 94 ARG n 1 95 PRO n 1 96 LYS n 1 97 ASP n 1 98 GLY n 1 99 GLU n 1 100 THR n 1 101 ILE n 1 102 GLU n 1 103 LEU n 1 104 ARG n 1 105 LEU n 1 106 VAL n 1 107 SER n 1 108 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 108 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TCN2, TC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'Fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TCO2_HUMAN _struct_ref.pdbx_db_accession P20062 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLLRDPNTP LLQGIADYRPKDGETIELRLVSW ; _struct_ref.pdbx_align_begin 325 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5NSA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20062 _struct_ref_seq.db_align_beg 325 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 427 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 307 _struct_ref_seq.pdbx_auth_seq_align_end 409 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5NSA GLY A 1 ? UNP P20062 ? ? 'expression tag' 302 1 1 5NSA VAL A 2 ? UNP P20062 ? ? 'expression tag' 303 2 1 5NSA ASP A 3 ? UNP P20062 ? ? 'expression tag' 304 3 1 5NSA HIS A 4 ? UNP P20062 ? ? 'expression tag' 305 4 1 5NSA MET A 5 ? UNP P20062 ? ? 'expression tag' 306 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8FS non-polymer . 1-ethynyl-2,4-difluorobenzene ? 'C8 H4 F2' 138.114 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B12 non-polymer . COBALAMIN ? 'C62 H89 Co N13 O14 P 2' 1330.356 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5NSA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.71 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.3 M potassium formate, 17% w/v polyethylene glycol 3,350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5NSA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.27 _reflns.d_resolution_low 43.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 33543 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.19 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.40 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5NSA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 62434 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.846 _refine.ls_d_res_high 1.273 _refine.ls_percent_reflns_obs 94.74 _refine.ls_R_factor_obs 0.1459 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1442 _refine.ls_R_factor_R_free 0.1788 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.98 _refine.ls_number_reflns_R_free 3112 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 19.57 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 827 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 102 _refine_hist.number_atoms_solvent 236 _refine_hist.number_atoms_total 1165 _refine_hist.d_res_high 1.273 _refine_hist.d_res_low 43.846 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.016 ? ? 1028 'X-RAY DIFFRACTION' ? f_angle_d 2.284 ? ? 1439 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.713 ? ? 396 'X-RAY DIFFRACTION' ? f_chiral_restr 0.629 ? ? 160 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 184 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.2733 1.2932 1767 0.3993 61.00 0.4031 . . 95 . . . . 'X-RAY DIFFRACTION' . 1.2932 1.3144 1828 0.5454 65.00 0.5625 . . 94 . . . . 'X-RAY DIFFRACTION' . 1.3144 1.3371 2824 0.2428 99.00 0.2747 . . 150 . . . . 'X-RAY DIFFRACTION' . 1.3371 1.3614 2814 0.2232 99.00 0.2599 . . 150 . . . . 'X-RAY DIFFRACTION' . 1.3614 1.3876 2841 0.2242 99.00 0.2605 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.3876 1.4159 2843 0.1985 99.00 0.2428 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.4159 1.4467 2782 0.1997 99.00 0.2205 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.4467 1.4803 2777 0.2128 98.00 0.2337 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.4803 1.5173 2835 0.1466 100.00 0.2094 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.5173 1.5584 2831 0.1306 100.00 0.1607 . . 154 . . . . 'X-RAY DIFFRACTION' . 1.5584 1.6042 2856 0.1262 100.00 0.1787 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.6042 1.6560 2816 0.1185 100.00 0.1545 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.6560 1.7152 2846 0.1134 100.00 0.1712 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.7152 1.7839 2824 0.1118 100.00 0.1310 . . 156 . . . . 'X-RAY DIFFRACTION' . 1.7839 1.8651 2857 0.1123 100.00 0.1508 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.8651 1.9634 2454 0.1812 86.00 0.2525 . . 121 . . . . 'X-RAY DIFFRACTION' . 1.9634 2.0864 2836 0.1182 99.00 0.1322 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.0864 2.2475 2641 0.1324 93.00 0.1732 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.2475 2.4736 2695 0.1249 95.00 0.1496 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.4736 2.8315 2821 0.1247 98.00 0.1430 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.8315 3.5672 2753 0.1265 98.00 0.1677 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.5672 43.8719 2781 0.1429 98.00 0.1820 . . 150 . . . . # _struct.entry_id 5NSA _struct.title 'Beta domain of human transcobalamin bound to Co-beta-[2-(2,4-difluorophenyl)ethinyl]cobalamin' _struct.pdbx_descriptor Transcobalamin-2 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5NSA _struct_keywords.text 'binding protein, bloodstream, antivitamin B12, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id THR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 35 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 47 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id THR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 336 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 348 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B B12 . CO ? ? ? 1_555 C 8FS . CAI ? ? A B12 501 A 8FS 502 1_555 ? ? ? ? ? ? ? 2.195 ? metalc2 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 503 A HOH 620 1_555 ? ? ? ? ? ? ? 2.091 ? metalc3 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 503 A HOH 735 1_555 ? ? ? ? ? ? ? 2.142 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 21 A . ? LEU 322 A PRO 22 A ? PRO 323 A 1 7.19 2 LEU 21 A . ? LEU 322 A PRO 22 A ? PRO 323 A 1 3.80 3 ASP 81 A . ? ASP 382 A PRO 82 A ? PRO 383 A 1 -5.93 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 24 ? LEU A 31 ? TYR A 325 LEU A 332 AA1 2 ILE A 10 ? VAL A 17 ? ILE A 311 VAL A 318 AA1 3 THR A 100 ? SER A 107 ? THR A 401 SER A 408 AA1 4 GLU A 74 ? ARG A 80 ? GLU A 375 ARG A 381 AA1 5 THR A 84 ? PRO A 85 ? THR A 385 PRO A 386 AA2 1 TYR A 51 ? GLN A 54 ? TYR A 352 GLN A 355 AA2 2 TYR A 61 ? VAL A 65 ? TYR A 362 VAL A 366 AA2 3 LYS A 68 ? ALA A 69 ? LYS A 369 ALA A 370 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 28 ? O ILE A 329 N VAL A 13 ? N VAL A 314 AA1 2 3 N THR A 14 ? N THR A 315 O ILE A 101 ? O ILE A 402 AA1 3 4 O ARG A 104 ? O ARG A 405 N GLN A 77 ? N GLN A 378 AA1 4 5 N ARG A 80 ? N ARG A 381 O THR A 84 ? O THR A 385 AA2 1 2 N GLN A 54 ? N GLN A 355 O TYR A 61 ? O TYR A 362 AA2 2 3 N VAL A 65 ? N VAL A 366 O LYS A 68 ? O LYS A 369 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A B12 501 ? 33 'binding site for residue B12 A 501' AC2 Software A 8FS 502 ? 6 'binding site for residue 8FS A 502' AC3 Software A CA 503 ? 5 'binding site for residue CA A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 33 ASP A 3 ? ASP A 304 . ? 3_544 ? 2 AC1 33 HIS A 4 ? HIS A 305 . ? 3_544 ? 3 AC1 33 MET A 5 ? MET A 306 . ? 3_544 ? 4 AC1 33 SER A 56 ? SER A 357 . ? 1_555 ? 5 AC1 33 SER A 58 ? SER A 359 . ? 1_555 ? 6 AC1 33 GLY A 59 ? GLY A 360 . ? 1_555 ? 7 AC1 33 TYR A 61 ? TYR A 362 . ? 1_555 ? 8 AC1 33 LEU A 62 ? LEU A 363 . ? 1_555 ? 9 AC1 33 PHE A 75 ? PHE A 376 . ? 1_555 ? 10 AC1 33 TRP A 76 ? TRP A 377 . ? 1_555 ? 11 AC1 33 GLN A 77 ? GLN A 378 . ? 1_555 ? 12 AC1 33 LEU A 78 ? LEU A 379 . ? 1_555 ? 13 AC1 33 LEU A 86 ? LEU A 387 . ? 1_555 ? 14 AC1 33 LEU A 87 ? LEU A 388 . ? 1_555 ? 15 AC1 33 GLN A 88 ? GLN A 389 . ? 1_555 ? 16 AC1 33 GLY A 89 ? GLY A 390 . ? 1_555 ? 17 AC1 33 8FS C . ? 8FS A 502 . ? 1_555 ? 18 AC1 33 HOH E . ? HOH A 601 . ? 1_555 ? 19 AC1 33 HOH E . ? HOH A 611 . ? 1_555 ? 20 AC1 33 HOH E . ? HOH A 613 . ? 1_555 ? 21 AC1 33 HOH E . ? HOH A 614 . ? 1_555 ? 22 AC1 33 HOH E . ? HOH A 640 . ? 1_555 ? 23 AC1 33 HOH E . ? HOH A 642 . ? 1_555 ? 24 AC1 33 HOH E . ? HOH A 655 . ? 1_555 ? 25 AC1 33 HOH E . ? HOH A 657 . ? 1_555 ? 26 AC1 33 HOH E . ? HOH A 658 . ? 1_555 ? 27 AC1 33 HOH E . ? HOH A 663 . ? 1_555 ? 28 AC1 33 HOH E . ? HOH A 678 . ? 1_555 ? 29 AC1 33 HOH E . ? HOH A 682 . ? 1_555 ? 30 AC1 33 HOH E . ? HOH A 716 . ? 1_555 ? 31 AC1 33 HOH E . ? HOH A 731 . ? 1_555 ? 32 AC1 33 HOH E . ? HOH A 744 . ? 1_555 ? 33 AC1 33 HOH E . ? HOH A 806 . ? 3_543 ? 34 AC2 6 ILE A 10 ? ILE A 311 . ? 3_544 ? 35 AC2 6 SER A 29 ? SER A 330 . ? 3_544 ? 36 AC2 6 VAL A 30 ? VAL A 331 . ? 3_544 ? 37 AC2 6 LEU A 31 ? LEU A 332 . ? 3_544 ? 38 AC2 6 B12 B . ? B12 A 501 . ? 1_555 ? 39 AC2 6 HOH E . ? HOH A 779 . ? 1_555 ? 40 AC3 5 ASP A 3 ? ASP A 304 . ? 1_555 ? 41 AC3 5 HIS A 4 ? HIS A 305 . ? 1_555 ? 42 AC3 5 HIS A 44 ? HIS A 345 . ? 1_556 ? 43 AC3 5 HOH E . ? HOH A 620 . ? 1_555 ? 44 AC3 5 HOH E . ? HOH A 735 . ? 1_555 ? # _atom_sites.entry_id 5NSA _atom_sites.fract_transf_matrix[1][1] 0.016202 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016052 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029619 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CO F H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 302 ? ? ? A . n A 1 2 VAL 2 303 ? ? ? A . n A 1 3 ASP 3 304 304 ASP ASP A . n A 1 4 HIS 4 305 305 HIS HIS A . n A 1 5 MET 5 306 306 MET MET A . n A 1 6 GLN 6 307 307 GLN GLN A . n A 1 7 THR 7 308 308 THR THR A . n A 1 8 GLN 8 309 309 GLN GLN A . n A 1 9 GLU 9 310 310 GLU GLU A . n A 1 10 ILE 10 311 311 ILE ILE A . n A 1 11 ILE 11 312 312 ILE ILE A . n A 1 12 SER 12 313 313 SER SER A . n A 1 13 VAL 13 314 314 VAL VAL A . n A 1 14 THR 14 315 315 THR THR A . n A 1 15 LEU 15 316 316 LEU LEU A . n A 1 16 GLN 16 317 317 GLN GLN A . n A 1 17 VAL 17 318 318 VAL VAL A . n A 1 18 LEU 18 319 319 LEU LEU A . n A 1 19 SER 19 320 320 SER SER A . n A 1 20 LEU 20 321 321 LEU LEU A . n A 1 21 LEU 21 322 322 LEU LEU A . n A 1 22 PRO 22 323 323 PRO PRO A . n A 1 23 PRO 23 324 324 PRO PRO A . n A 1 24 TYR 24 325 325 TYR TYR A . n A 1 25 ARG 25 326 326 ARG ARG A . n A 1 26 GLN 26 327 327 GLN GLN A . n A 1 27 SER 27 328 328 SER SER A . n A 1 28 ILE 28 329 329 ILE ILE A . n A 1 29 SER 29 330 330 SER SER A . n A 1 30 VAL 30 331 331 VAL VAL A . n A 1 31 LEU 31 332 332 LEU LEU A . n A 1 32 ALA 32 333 333 ALA ALA A . n A 1 33 GLY 33 334 334 GLY GLY A . n A 1 34 SER 34 335 335 SER SER A . n A 1 35 THR 35 336 336 THR THR A . n A 1 36 VAL 36 337 337 VAL VAL A . n A 1 37 GLU 37 338 338 GLU GLU A . n A 1 38 ASP 38 339 339 ASP ASP A . n A 1 39 VAL 39 340 340 VAL VAL A . n A 1 40 LEU 40 341 341 LEU LEU A . n A 1 41 LYS 41 342 342 LYS LYS A . n A 1 42 LYS 42 343 343 LYS LYS A . n A 1 43 ALA 43 344 344 ALA ALA A . n A 1 44 HIS 44 345 345 HIS HIS A . n A 1 45 GLU 45 346 346 GLU GLU A . n A 1 46 LEU 46 347 347 LEU LEU A . n A 1 47 GLY 47 348 348 GLY GLY A . n A 1 48 GLY 48 349 349 GLY GLY A . n A 1 49 PHE 49 350 350 PHE PHE A . n A 1 50 THR 50 351 351 THR THR A . n A 1 51 TYR 51 352 352 TYR TYR A . n A 1 52 GLU 52 353 353 GLU GLU A . n A 1 53 THR 53 354 354 THR THR A . n A 1 54 GLN 54 355 355 GLN GLN A . n A 1 55 ALA 55 356 356 ALA ALA A . n A 1 56 SER 56 357 357 SER SER A . n A 1 57 LEU 57 358 358 LEU LEU A . n A 1 58 SER 58 359 359 SER SER A . n A 1 59 GLY 59 360 360 GLY GLY A . n A 1 60 PRO 60 361 361 PRO PRO A . n A 1 61 TYR 61 362 362 TYR TYR A . n A 1 62 LEU 62 363 363 LEU LEU A . n A 1 63 THR 63 364 364 THR THR A . n A 1 64 SER 64 365 365 SER SER A . n A 1 65 VAL 65 366 366 VAL VAL A . n A 1 66 MET 66 367 367 MET MET A . n A 1 67 GLY 67 368 368 GLY GLY A . n A 1 68 LYS 68 369 369 LYS LYS A . n A 1 69 ALA 69 370 370 ALA ALA A . n A 1 70 ALA 70 371 371 ALA ALA A . n A 1 71 GLY 71 372 372 GLY GLY A . n A 1 72 GLU 72 373 373 GLU GLU A . n A 1 73 ARG 73 374 374 ARG ARG A . n A 1 74 GLU 74 375 375 GLU GLU A . n A 1 75 PHE 75 376 376 PHE PHE A . n A 1 76 TRP 76 377 377 TRP TRP A . n A 1 77 GLN 77 378 378 GLN GLN A . n A 1 78 LEU 78 379 379 LEU LEU A . n A 1 79 LEU 79 380 380 LEU LEU A . n A 1 80 ARG 80 381 381 ARG ARG A . n A 1 81 ASP 81 382 382 ASP ASP A . n A 1 82 PRO 82 383 383 PRO PRO A . n A 1 83 ASN 83 384 384 ASN ASN A . n A 1 84 THR 84 385 385 THR THR A . n A 1 85 PRO 85 386 386 PRO PRO A . n A 1 86 LEU 86 387 387 LEU LEU A . n A 1 87 LEU 87 388 388 LEU LEU A . n A 1 88 GLN 88 389 389 GLN GLN A . n A 1 89 GLY 89 390 390 GLY GLY A . n A 1 90 ILE 90 391 391 ILE ILE A . n A 1 91 ALA 91 392 392 ALA ALA A . n A 1 92 ASP 92 393 393 ASP ASP A . n A 1 93 TYR 93 394 394 TYR TYR A . n A 1 94 ARG 94 395 395 ARG ARG A . n A 1 95 PRO 95 396 396 PRO PRO A . n A 1 96 LYS 96 397 397 LYS LYS A . n A 1 97 ASP 97 398 398 ASP ASP A . n A 1 98 GLY 98 399 399 GLY GLY A . n A 1 99 GLU 99 400 400 GLU GLU A . n A 1 100 THR 100 401 401 THR THR A . n A 1 101 ILE 101 402 402 ILE ILE A . n A 1 102 GLU 102 403 403 GLU GLU A . n A 1 103 LEU 103 404 404 LEU LEU A . n A 1 104 ARG 104 405 405 ARG ARG A . n A 1 105 LEU 105 406 406 LEU LEU A . n A 1 106 VAL 106 407 407 VAL VAL A . n A 1 107 SER 107 408 408 SER SER A . n A 1 108 TRP 108 409 409 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B12 1 501 301 B12 B12 A . C 3 8FS 1 502 302 8FS 8FS A . D 4 CA 1 503 1 CA CA A . E 5 HOH 1 601 138 HOH HOH A . E 5 HOH 2 602 177 HOH HOH A . E 5 HOH 3 603 105 HOH HOH A . E 5 HOH 4 604 117 HOH HOH A . E 5 HOH 5 605 79 HOH HOH A . E 5 HOH 6 606 218 HOH HOH A . E 5 HOH 7 607 82 HOH HOH A . E 5 HOH 8 608 104 HOH HOH A . E 5 HOH 9 609 181 HOH HOH A . E 5 HOH 10 610 93 HOH HOH A . E 5 HOH 11 611 63 HOH HOH A . E 5 HOH 12 612 176 HOH HOH A . E 5 HOH 13 613 170 HOH HOH A . E 5 HOH 14 614 151 HOH HOH A . E 5 HOH 15 615 39 HOH HOH A . E 5 HOH 16 616 97 HOH HOH A . E 5 HOH 17 617 84 HOH HOH A . E 5 HOH 18 618 204 HOH HOH A . E 5 HOH 19 619 118 HOH HOH A . E 5 HOH 20 620 234 HOH HOH A . E 5 HOH 21 621 159 HOH HOH A . E 5 HOH 22 622 73 HOH HOH A . E 5 HOH 23 623 115 HOH HOH A . E 5 HOH 24 624 65 HOH HOH A . E 5 HOH 25 625 51 HOH HOH A . E 5 HOH 26 626 119 HOH HOH A . E 5 HOH 27 627 143 HOH HOH A . E 5 HOH 28 628 83 HOH HOH A . E 5 HOH 29 629 57 HOH HOH A . E 5 HOH 30 630 27 HOH HOH A . E 5 HOH 31 631 87 HOH HOH A . E 5 HOH 32 632 76 HOH HOH A . E 5 HOH 33 633 167 HOH HOH A . E 5 HOH 34 634 195 HOH HOH A . E 5 HOH 35 635 184 HOH HOH A . E 5 HOH 36 636 26 HOH HOH A . E 5 HOH 37 637 43 HOH HOH A . E 5 HOH 38 638 40 HOH HOH A . E 5 HOH 39 639 33 HOH HOH A . E 5 HOH 40 640 213 HOH HOH A . E 5 HOH 41 641 145 HOH HOH A . E 5 HOH 42 642 106 HOH HOH A . E 5 HOH 43 643 21 HOH HOH A . E 5 HOH 44 644 193 HOH HOH A . E 5 HOH 45 645 227 HOH HOH A . E 5 HOH 46 646 6 HOH HOH A . E 5 HOH 47 647 99 HOH HOH A . E 5 HOH 48 648 4 HOH HOH A . E 5 HOH 49 649 56 HOH HOH A . E 5 HOH 50 650 50 HOH HOH A . E 5 HOH 51 651 12 HOH HOH A . E 5 HOH 52 652 49 HOH HOH A . E 5 HOH 53 653 7 HOH HOH A . E 5 HOH 54 654 13 HOH HOH A . E 5 HOH 55 655 86 HOH HOH A . E 5 HOH 56 656 25 HOH HOH A . E 5 HOH 57 657 102 HOH HOH A . E 5 HOH 58 658 154 HOH HOH A . E 5 HOH 59 659 68 HOH HOH A . E 5 HOH 60 660 142 HOH HOH A . E 5 HOH 61 661 55 HOH HOH A . E 5 HOH 62 662 155 HOH HOH A . E 5 HOH 63 663 48 HOH HOH A . E 5 HOH 64 664 100 HOH HOH A . E 5 HOH 65 665 180 HOH HOH A . E 5 HOH 66 666 10 HOH HOH A . E 5 HOH 67 667 31 HOH HOH A . E 5 HOH 68 668 38 HOH HOH A . E 5 HOH 69 669 3 HOH HOH A . E 5 HOH 70 670 67 HOH HOH A . E 5 HOH 71 671 44 HOH HOH A . E 5 HOH 72 672 64 HOH HOH A . E 5 HOH 73 673 169 HOH HOH A . E 5 HOH 74 674 212 HOH HOH A . E 5 HOH 75 675 9 HOH HOH A . E 5 HOH 76 676 58 HOH HOH A . E 5 HOH 77 677 62 HOH HOH A . E 5 HOH 78 678 17 HOH HOH A . E 5 HOH 79 679 20 HOH HOH A . E 5 HOH 80 680 233 HOH HOH A . E 5 HOH 81 681 32 HOH HOH A . E 5 HOH 82 682 150 HOH HOH A . E 5 HOH 83 683 94 HOH HOH A . E 5 HOH 84 684 85 HOH HOH A . E 5 HOH 85 685 8 HOH HOH A . E 5 HOH 86 686 209 HOH HOH A . E 5 HOH 87 687 30 HOH HOH A . E 5 HOH 88 688 214 HOH HOH A . E 5 HOH 89 689 75 HOH HOH A . E 5 HOH 90 690 42 HOH HOH A . E 5 HOH 91 691 19 HOH HOH A . E 5 HOH 92 692 54 HOH HOH A . E 5 HOH 93 693 110 HOH HOH A . E 5 HOH 94 694 22 HOH HOH A . E 5 HOH 95 695 16 HOH HOH A . E 5 HOH 96 696 160 HOH HOH A . E 5 HOH 97 697 71 HOH HOH A . E 5 HOH 98 698 122 HOH HOH A . E 5 HOH 99 699 1 HOH HOH A . E 5 HOH 100 700 148 HOH HOH A . E 5 HOH 101 701 2 HOH HOH A . E 5 HOH 102 702 222 HOH HOH A . E 5 HOH 103 703 210 HOH HOH A . E 5 HOH 104 704 81 HOH HOH A . E 5 HOH 105 705 45 HOH HOH A . E 5 HOH 106 706 80 HOH HOH A . E 5 HOH 107 707 74 HOH HOH A . E 5 HOH 108 708 108 HOH HOH A . E 5 HOH 109 709 175 HOH HOH A . E 5 HOH 110 710 224 HOH HOH A . E 5 HOH 111 711 131 HOH HOH A . E 5 HOH 112 712 46 HOH HOH A . E 5 HOH 113 713 15 HOH HOH A . E 5 HOH 114 714 111 HOH HOH A . E 5 HOH 115 715 221 HOH HOH A . E 5 HOH 116 716 103 HOH HOH A . E 5 HOH 117 717 219 HOH HOH A . E 5 HOH 118 718 24 HOH HOH A . E 5 HOH 119 719 129 HOH HOH A . E 5 HOH 120 720 59 HOH HOH A . E 5 HOH 121 721 37 HOH HOH A . E 5 HOH 122 722 53 HOH HOH A . E 5 HOH 123 723 189 HOH HOH A . E 5 HOH 124 724 11 HOH HOH A . E 5 HOH 125 725 29 HOH HOH A . E 5 HOH 126 726 116 HOH HOH A . E 5 HOH 127 727 179 HOH HOH A . E 5 HOH 128 728 36 HOH HOH A . E 5 HOH 129 729 202 HOH HOH A . E 5 HOH 130 730 191 HOH HOH A . E 5 HOH 131 731 14 HOH HOH A . E 5 HOH 132 732 173 HOH HOH A . E 5 HOH 133 733 174 HOH HOH A . E 5 HOH 134 734 78 HOH HOH A . E 5 HOH 135 735 217 HOH HOH A . E 5 HOH 136 736 23 HOH HOH A . E 5 HOH 137 737 91 HOH HOH A . E 5 HOH 138 738 18 HOH HOH A . E 5 HOH 139 739 5 HOH HOH A . E 5 HOH 140 740 144 HOH HOH A . E 5 HOH 141 741 124 HOH HOH A . E 5 HOH 142 742 107 HOH HOH A . E 5 HOH 143 743 182 HOH HOH A . E 5 HOH 144 744 152 HOH HOH A . E 5 HOH 145 745 163 HOH HOH A . E 5 HOH 146 746 135 HOH HOH A . E 5 HOH 147 747 223 HOH HOH A . E 5 HOH 148 748 178 HOH HOH A . E 5 HOH 149 749 235 HOH HOH A . E 5 HOH 150 750 130 HOH HOH A . E 5 HOH 151 751 164 HOH HOH A . E 5 HOH 152 752 215 HOH HOH A . E 5 HOH 153 753 172 HOH HOH A . E 5 HOH 154 754 207 HOH HOH A . E 5 HOH 155 755 161 HOH HOH A . E 5 HOH 156 756 147 HOH HOH A . E 5 HOH 157 757 194 HOH HOH A . E 5 HOH 158 758 92 HOH HOH A . E 5 HOH 159 759 114 HOH HOH A . E 5 HOH 160 760 136 HOH HOH A . E 5 HOH 161 761 139 HOH HOH A . E 5 HOH 162 762 171 HOH HOH A . E 5 HOH 163 763 208 HOH HOH A . E 5 HOH 164 764 141 HOH HOH A . E 5 HOH 165 765 220 HOH HOH A . E 5 HOH 166 766 137 HOH HOH A . E 5 HOH 167 767 168 HOH HOH A . E 5 HOH 168 768 156 HOH HOH A . E 5 HOH 169 769 186 HOH HOH A . E 5 HOH 170 770 69 HOH HOH A . E 5 HOH 171 771 112 HOH HOH A . E 5 HOH 172 772 89 HOH HOH A . E 5 HOH 173 773 88 HOH HOH A . E 5 HOH 174 774 198 HOH HOH A . E 5 HOH 175 775 201 HOH HOH A . E 5 HOH 176 776 90 HOH HOH A . E 5 HOH 177 777 134 HOH HOH A . E 5 HOH 178 778 185 HOH HOH A . E 5 HOH 179 779 41 HOH HOH A . E 5 HOH 180 780 197 HOH HOH A . E 5 HOH 181 781 206 HOH HOH A . E 5 HOH 182 782 228 HOH HOH A . E 5 HOH 183 783 34 HOH HOH A . E 5 HOH 184 784 47 HOH HOH A . E 5 HOH 185 785 149 HOH HOH A . E 5 HOH 186 786 225 HOH HOH A . E 5 HOH 187 787 96 HOH HOH A . E 5 HOH 188 788 52 HOH HOH A . E 5 HOH 189 789 166 HOH HOH A . E 5 HOH 190 790 109 HOH HOH A . E 5 HOH 191 791 140 HOH HOH A . E 5 HOH 192 792 61 HOH HOH A . E 5 HOH 193 793 127 HOH HOH A . E 5 HOH 194 794 158 HOH HOH A . E 5 HOH 195 795 211 HOH HOH A . E 5 HOH 196 796 66 HOH HOH A . E 5 HOH 197 797 199 HOH HOH A . E 5 HOH 198 798 126 HOH HOH A . E 5 HOH 199 799 128 HOH HOH A . E 5 HOH 200 800 113 HOH HOH A . E 5 HOH 201 801 28 HOH HOH A . E 5 HOH 202 802 133 HOH HOH A . E 5 HOH 203 803 70 HOH HOH A . E 5 HOH 204 804 95 HOH HOH A . E 5 HOH 205 805 187 HOH HOH A . E 5 HOH 206 806 188 HOH HOH A . E 5 HOH 207 807 203 HOH HOH A . E 5 HOH 208 808 153 HOH HOH A . E 5 HOH 209 809 216 HOH HOH A . E 5 HOH 210 810 196 HOH HOH A . E 5 HOH 211 811 101 HOH HOH A . E 5 HOH 212 812 200 HOH HOH A . E 5 HOH 213 813 162 HOH HOH A . E 5 HOH 214 814 77 HOH HOH A . E 5 HOH 215 815 232 HOH HOH A . E 5 HOH 216 816 183 HOH HOH A . E 5 HOH 217 817 230 HOH HOH A . E 5 HOH 218 818 146 HOH HOH A . E 5 HOH 219 819 72 HOH HOH A . E 5 HOH 220 820 98 HOH HOH A . E 5 HOH 221 821 60 HOH HOH A . E 5 HOH 222 822 132 HOH HOH A . E 5 HOH 223 823 125 HOH HOH A . E 5 HOH 224 824 165 HOH HOH A . E 5 HOH 225 825 120 HOH HOH A . E 5 HOH 226 826 226 HOH HOH A . E 5 HOH 227 827 35 HOH HOH A . E 5 HOH 228 828 205 HOH HOH A . E 5 HOH 229 829 231 HOH HOH A . E 5 HOH 230 830 236 HOH HOH A . E 5 HOH 231 831 157 HOH HOH A . E 5 HOH 232 832 229 HOH HOH A . E 5 HOH 233 833 123 HOH HOH A . E 5 HOH 234 834 121 HOH HOH A . E 5 HOH 235 835 192 HOH HOH A . E 5 HOH 236 836 190 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1200 ? 1 MORE -17 ? 1 'SSA (A^2)' 6980 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 679 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 CAI ? C 8FS . ? A 8FS 502 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N21 ? B B12 . ? A B12 501 ? 1_555 96.0 ? 2 CAI ? C 8FS . ? A 8FS 502 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N22 ? B B12 . ? A B12 501 ? 1_555 95.2 ? 3 N21 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N22 ? B B12 . ? A B12 501 ? 1_555 92.2 ? 4 CAI ? C 8FS . ? A 8FS 502 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N23 ? B B12 . ? A B12 501 ? 1_555 89.1 ? 5 N21 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N23 ? B B12 . ? A B12 501 ? 1_555 172.4 ? 6 N22 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N23 ? B B12 . ? A B12 501 ? 1_555 92.9 ? 7 CAI ? C 8FS . ? A 8FS 502 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N24 ? B B12 . ? A B12 501 ? 1_555 83.7 ? 8 N21 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N24 ? B B12 . ? A B12 501 ? 1_555 84.7 ? 9 N22 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N24 ? B B12 . ? A B12 501 ? 1_555 176.6 ? 10 N23 ? B B12 . ? A B12 501 ? 1_555 CO ? B B12 . ? A B12 501 ? 1_555 N24 ? B B12 . ? A B12 501 ? 1_555 90.3 ? 11 O ? E HOH . ? A HOH 620 ? 1_555 CA ? D CA . ? A CA 503 ? 1_555 O ? E HOH . ? A HOH 735 ? 1_555 178.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-09-27 2 'Structure model' 1 1 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category reflns_shell # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 635 ? ? O A HOH 781 ? ? 1.94 2 1 O A HOH 614 ? ? O A HOH 682 ? ? 1.98 3 1 O A HOH 613 ? ? O A HOH 614 ? ? 1.98 4 1 O A HOH 751 ? ? O A HOH 789 ? ? 2.05 5 1 O A HOH 805 ? ? O A HOH 809 ? ? 2.10 6 1 O A HOH 732 ? ? O A HOH 743 ? ? 2.11 7 1 O A HOH 756 ? ? O A HOH 810 ? ? 2.11 8 1 O A HOH 627 ? ? O A HOH 720 ? B 2.12 9 1 O A HOH 748 ? ? O A HOH 769 ? ? 2.16 10 1 O A HOH 686 ? ? O A HOH 763 ? ? 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 828 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 828 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_655 _pdbx_validate_symm_contact.dist 1.95 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 346 ? A CD A GLU 346 ? A 1.633 1.515 0.118 0.015 N 2 1 CG A GLU 346 ? B CD A GLU 346 ? B 1.633 1.515 0.118 0.015 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 322 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 322 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 CD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 322 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 122.42 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation 11.42 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.70 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 384 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id B _pdbx_validate_torsion.phi 39.98 _pdbx_validate_torsion.psi 53.05 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 829 ? 6.07 . 2 1 O ? A HOH 830 ? 6.11 . 3 1 O ? A HOH 831 ? 6.29 . 4 1 O ? A HOH 832 ? 6.57 . 5 1 O ? A HOH 833 ? . 6.71 6 1 O ? A HOH 834 ? 6.88 . 7 1 O ? A HOH 835 ? 6.96 . 8 1 O ? A HOH 836 ? 7.32 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 304 ? CG ? A ASP 3 CG 2 1 Y 1 A ASP 304 ? OD1 ? A ASP 3 OD1 3 1 Y 1 A ASP 304 ? OD2 ? A ASP 3 OD2 4 1 Y 1 A LYS 397 ? CE ? A LYS 96 CE 5 1 Y 1 A LYS 397 ? NZ ? A LYS 96 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 302 ? A GLY 1 2 1 Y 1 A VAL 303 ? A VAL 2 # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number 310030B_166672 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 COBALAMIN B12 3 1-ethynyl-2,4-difluorobenzene 8FS 4 'CALCIUM ION' CA 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #