HEADER PROTEIN BINDING 02-MAY-17 5NUV TITLE STRUCTURE OF THE WD40-DOMAIN OF HUMAN ATG16L1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOPHAGY-RELATED PROTEIN 16-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APG16-LIKE 1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATG16L1, APG16L, UNQ9393/PRO34307; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS ATG16L1, WD40, SEVEN-BLADED BETA-PROPELLER, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.BAJAGIC,A.SCRIMA REVDAT 4 17-JAN-24 5NUV 1 REMARK REVDAT 3 11-OCT-17 5NUV 1 REMARK REVDAT 2 06-SEP-17 5NUV 1 JRNL REVDAT 1 19-JUL-17 5NUV 0 JRNL AUTH M.BAJAGIC,A.ARCHNA,P.BUSING,A.SCRIMA JRNL TITL STRUCTURE OF THE WD40-DOMAIN OF HUMAN ATG16L1. JRNL REF PROTEIN SCI. V. 26 1828 2017 JRNL REFN ESSN 1469-896X JRNL PMID 28685931 JRNL DOI 10.1002/PRO.3222 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9265 - 3.7352 1.00 2697 142 0.1502 0.1617 REMARK 3 2 3.7352 - 2.9649 1.00 2634 139 0.1493 0.1780 REMARK 3 3 2.9649 - 2.5902 1.00 2617 138 0.1605 0.2047 REMARK 3 4 2.5902 - 2.3534 1.00 2611 137 0.1673 0.2093 REMARK 3 5 2.3534 - 2.1847 1.00 2585 136 0.1679 0.2047 REMARK 3 6 2.1847 - 2.0559 1.00 2603 137 0.1583 0.2012 REMARK 3 7 2.0559 - 1.9529 1.00 2606 137 0.1539 0.1913 REMARK 3 8 1.9529 - 1.8679 1.00 2566 136 0.1630 0.1999 REMARK 3 9 1.8679 - 1.7960 1.00 2584 136 0.1847 0.2266 REMARK 3 10 1.7960 - 1.7340 1.00 2572 135 0.1962 0.2412 REMARK 3 11 1.7340 - 1.6798 1.00 2563 135 0.2040 0.2257 REMARK 3 12 1.6798 - 1.6318 1.00 2593 136 0.2168 0.2782 REMARK 3 13 1.6318 - 1.5888 1.00 2559 135 0.2460 0.3129 REMARK 3 14 1.5888 - 1.5501 0.99 2574 135 0.2780 0.3238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2373 REMARK 3 ANGLE : 1.108 3223 REMARK 3 CHIRALITY : 0.066 372 REMARK 3 PLANARITY : 0.007 407 REMARK 3 DIHEDRAL : 9.643 1419 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.3673 34.7987 2.6029 REMARK 3 T TENSOR REMARK 3 T11: 0.1967 T22: 0.1746 REMARK 3 T33: 0.1510 T12: 0.0566 REMARK 3 T13: -0.0284 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 1.7273 L22: 0.8789 REMARK 3 L33: 1.5414 L12: 0.6654 REMARK 3 L13: 0.2690 L23: -0.7717 REMARK 3 S TENSOR REMARK 3 S11: -0.0542 S12: 0.3109 S13: 0.0272 REMARK 3 S21: -0.2557 S22: -0.0534 S23: -0.0530 REMARK 3 S31: -0.1613 S32: -0.1012 S33: -0.0039 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 342 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.9672 38.7538 1.1791 REMARK 3 T TENSOR REMARK 3 T11: 0.2408 T22: 0.4764 REMARK 3 T33: 0.2232 T12: 0.1354 REMARK 3 T13: -0.0451 T23: -0.0519 REMARK 3 L TENSOR REMARK 3 L11: 0.7402 L22: 1.2362 REMARK 3 L33: 0.5929 L12: 0.1460 REMARK 3 L13: -0.0179 L23: 0.0200 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: 0.2765 S13: 0.0630 REMARK 3 S21: -0.2681 S22: 0.0396 S23: -0.0422 REMARK 3 S31: -0.2235 S32: -0.0126 S33: 0.0215 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8964 32.0085 10.8300 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: 0.5839 REMARK 3 T33: 0.1755 T12: 0.0799 REMARK 3 T13: -0.1000 T23: -0.0889 REMARK 3 L TENSOR REMARK 3 L11: 0.8949 L22: 0.8646 REMARK 3 L33: 0.8060 L12: 0.1266 REMARK 3 L13: -0.2239 L23: -0.4305 REMARK 3 S TENSOR REMARK 3 S11: -0.0387 S12: 0.0363 S13: -0.0596 REMARK 3 S21: -0.1192 S22: 0.1365 S23: 0.3141 REMARK 3 S31: -0.0622 S32: -0.8169 S33: 0.1328 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 405 THROUGH 427 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9200 25.4949 19.3894 REMARK 3 T TENSOR REMARK 3 T11: 0.1754 T22: 0.5019 REMARK 3 T33: 0.2098 T12: -0.0482 REMARK 3 T13: 0.0034 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 1.1629 L22: 0.4477 REMARK 3 L33: 1.3978 L12: -0.3050 REMARK 3 L13: -0.0832 L23: -0.6939 REMARK 3 S TENSOR REMARK 3 S11: 0.0808 S12: 0.1048 S13: -0.4402 REMARK 3 S21: -0.0024 S22: -0.1834 S23: 0.1688 REMARK 3 S31: 0.3935 S32: -0.6367 S33: 0.0254 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 428 THROUGH 447 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0744 24.3866 24.7648 REMARK 3 T TENSOR REMARK 3 T11: 0.1770 T22: 0.6282 REMARK 3 T33: 0.2142 T12: -0.2370 REMARK 3 T13: 0.0611 T23: -0.0710 REMARK 3 L TENSOR REMARK 3 L11: 0.3763 L22: 0.5397 REMARK 3 L33: 0.2622 L12: -0.0108 REMARK 3 L13: 0.1068 L23: -0.0963 REMARK 3 S TENSOR REMARK 3 S11: -0.1320 S12: 0.1599 S13: -0.2294 REMARK 3 S21: -0.2359 S22: 0.1474 S23: 0.1061 REMARK 3 S31: 0.2381 S32: -0.5912 S33: -0.0176 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 448 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.8478 21.7780 24.9498 REMARK 3 T TENSOR REMARK 3 T11: 0.1934 T22: 0.1277 REMARK 3 T33: 0.1902 T12: -0.0389 REMARK 3 T13: 0.0501 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.9373 L22: 0.8665 REMARK 3 L33: 0.8068 L12: -0.5858 REMARK 3 L13: 0.0250 L23: -0.6486 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: -0.0433 S13: -0.2600 REMARK 3 S21: 0.1191 S22: -0.0979 S23: 0.2027 REMARK 3 S31: 0.3621 S32: -0.1671 S33: -0.0081 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 476 THROUGH 507 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.0123 19.5850 21.8920 REMARK 3 T TENSOR REMARK 3 T11: 0.2268 T22: 0.0939 REMARK 3 T33: 0.1998 T12: -0.0590 REMARK 3 T13: 0.0194 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.3825 L22: 1.1528 REMARK 3 L33: 0.8109 L12: -0.1901 REMARK 3 L13: 0.2181 L23: 0.0194 REMARK 3 S TENSOR REMARK 3 S11: 0.0589 S12: -0.2038 S13: -0.3889 REMARK 3 S21: 0.1222 S22: -0.0639 S23: 0.0658 REMARK 3 S31: 0.4906 S32: -0.2356 S33: 0.0120 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 508 THROUGH 526 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.1697 20.2144 20.0917 REMARK 3 T TENSOR REMARK 3 T11: 0.2046 T22: 0.0854 REMARK 3 T33: 0.2135 T12: 0.0224 REMARK 3 T13: -0.0175 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.6008 L22: 0.2979 REMARK 3 L33: 0.3064 L12: 0.2419 REMARK 3 L13: 0.0446 L23: 0.0532 REMARK 3 S TENSOR REMARK 3 S11: 0.0796 S12: -0.0477 S13: -0.2114 REMARK 3 S21: 0.0514 S22: 0.0081 S23: -0.1362 REMARK 3 S31: 0.2852 S32: 0.0958 S33: 0.0050 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 527 THROUGH 539 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.2968 34.7752 18.1382 REMARK 3 T TENSOR REMARK 3 T11: 0.1343 T22: 0.0815 REMARK 3 T33: 0.1909 T12: -0.0002 REMARK 3 T13: 0.0065 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.2368 L22: 0.1318 REMARK 3 L33: 0.6177 L12: -0.0689 REMARK 3 L13: 0.1654 L23: -0.2838 REMARK 3 S TENSOR REMARK 3 S11: -0.0337 S12: -0.1988 S13: 0.2963 REMARK 3 S21: 0.1628 S22: -0.0907 S23: -0.1150 REMARK 3 S31: -0.2103 S32: 0.0256 S33: -0.0401 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 540 THROUGH 557 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.4813 28.1503 9.0143 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.0611 REMARK 3 T33: 0.1461 T12: 0.0109 REMARK 3 T13: 0.0147 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.1375 L22: 0.2584 REMARK 3 L33: 0.9356 L12: -0.1089 REMARK 3 L13: 0.2527 L23: -0.2442 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: 0.1688 S13: -0.0541 REMARK 3 S21: -0.1646 S22: -0.0308 S23: -0.2017 REMARK 3 S31: -0.0555 S32: 0.0762 S33: -0.0991 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 558 THROUGH 579 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.7772 32.0758 7.4207 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.1489 REMARK 3 T33: 0.1823 T12: 0.0062 REMARK 3 T13: 0.0049 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.4895 L22: 0.3134 REMARK 3 L33: 1.6527 L12: 0.6351 REMARK 3 L13: -0.0289 L23: 0.0024 REMARK 3 S TENSOR REMARK 3 S11: 0.0976 S12: 0.2022 S13: 0.0272 REMARK 3 S21: -0.2541 S22: -0.1127 S23: -0.2691 REMARK 3 S31: -0.1325 S32: 0.3458 S33: -0.0053 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 580 THROUGH 607 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.4896 34.7805 3.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.1104 REMARK 3 T33: 0.1318 T12: 0.0332 REMARK 3 T13: -0.0022 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.2648 L22: 0.3074 REMARK 3 L33: 0.6242 L12: 0.4321 REMARK 3 L13: 0.0946 L23: -0.2070 REMARK 3 S TENSOR REMARK 3 S11: -0.0912 S12: 0.2417 S13: 0.0422 REMARK 3 S21: -0.2001 S22: 0.0002 S23: -0.0375 REMARK 3 S31: -0.3108 S32: -0.0468 S33: -0.0150 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NUV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200004763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38280 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 43.909 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.736 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.68 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2CNX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.61 M (NH4)2SO4, 0.09 M NACL, 0.1 M REMARK 280 MES PH 6.3, VAPOR DIFFUSION, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.77500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.77500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 979 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 299 REMARK 465 GLY A 300 REMARK 465 GLY A 301 REMARK 465 ARG A 302 REMARK 465 GLY A 303 REMARK 465 SER A 304 REMARK 465 GLY A 305 REMARK 465 LYS A 306 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 307 CG CD OE1 OE2 REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN A 520 O HOH A 805 1.59 REMARK 500 OE1 GLU A 555 O HOH A 801 1.88 REMARK 500 O HOH A 959 O HOH A 990 1.99 REMARK 500 O HOH A 819 O HOH A 887 2.11 REMARK 500 O HOH A 957 O HOH A 970 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 992 O HOH A 992 2656 1.81 REMARK 500 O HOH A 985 O HOH A 992 2656 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 354 10.75 -141.77 REMARK 500 PHE A 388 0.29 89.09 REMARK 500 ALA A 421 -32.12 -164.74 REMARK 500 CYS A 599 -14.95 81.57 REMARK 500 CYS A 599 -14.29 81.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BU3 A 701 DBREF 5NUV A 303 607 UNP Q676U5 A16L1_HUMAN 303 607 SEQADV 5NUV GLY A 299 UNP Q676U5 EXPRESSION TAG SEQADV 5NUV GLY A 300 UNP Q676U5 EXPRESSION TAG SEQADV 5NUV GLY A 301 UNP Q676U5 EXPRESSION TAG SEQADV 5NUV ARG A 302 UNP Q676U5 EXPRESSION TAG SEQADV 5NUV ALA A 354 UNP Q676U5 GLU 354 ENGINEERED MUTATION SEQADV 5NUV ALA A 355 UNP Q676U5 LYS 355 ENGINEERED MUTATION SEQADV 5NUV PRO A 607 UNP Q676U5 TYR 607 ENGINEERED MUTATION SEQRES 1 A 309 GLY GLY GLY ARG GLY SER GLY LYS GLU VAL ARG VAL PRO SEQRES 2 A 309 ALA THR ALA LEU CYS VAL PHE ASP ALA HIS ASP GLY GLU SEQRES 3 A 309 VAL ASN ALA VAL GLN PHE SER PRO GLY SER ARG LEU LEU SEQRES 4 A 309 ALA THR GLY GLY MET ASP ARG ARG VAL LYS LEU TRP GLU SEQRES 5 A 309 VAL PHE GLY ALA ALA CYS GLU PHE LYS GLY SER LEU SER SEQRES 6 A 309 GLY SER ASN ALA GLY ILE THR SER ILE GLU PHE ASP SER SEQRES 7 A 309 ALA GLY SER TYR LEU LEU ALA ALA SER ASN ASP PHE ALA SEQRES 8 A 309 SER ARG ILE TRP THR VAL ASP ASP TYR ARG LEU ARG HIS SEQRES 9 A 309 THR LEU THR GLY HIS SER GLY LYS VAL LEU SER ALA LYS SEQRES 10 A 309 PHE LEU LEU ASP ASN ALA ARG ILE VAL SER GLY SER HIS SEQRES 11 A 309 ASP ARG THR LEU LYS LEU TRP ASP LEU ARG SER LYS VAL SEQRES 12 A 309 CYS ILE LYS THR VAL PHE ALA GLY SER SER CYS ASN ASP SEQRES 13 A 309 ILE VAL CYS THR GLU GLN CYS VAL MET SER GLY HIS PHE SEQRES 14 A 309 ASP LYS LYS ILE ARG PHE TRP ASP ILE ARG SER GLU SER SEQRES 15 A 309 ILE VAL ARG GLU MET GLU LEU LEU GLY LYS ILE THR ALA SEQRES 16 A 309 LEU ASP LEU ASN PRO GLU ARG THR GLU LEU LEU SER CYS SEQRES 17 A 309 SER ARG ASP ASP LEU LEU LYS VAL ILE ASP LEU ARG THR SEQRES 18 A 309 ASN ALA ILE LYS GLN THR PHE SER ALA PRO GLY PHE LYS SEQRES 19 A 309 CYS GLY SER ASP TRP THR ARG VAL VAL PHE SER PRO ASP SEQRES 20 A 309 GLY SER TYR VAL ALA ALA GLY SER ALA GLU GLY SER LEU SEQRES 21 A 309 TYR ILE TRP SER VAL LEU THR GLY LYS VAL GLU LYS VAL SEQRES 22 A 309 LEU SER LYS GLN HIS SER SER SER ILE ASN ALA VAL ALA SEQRES 23 A 309 TRP SER PRO SER GLY SER HIS VAL VAL SER VAL ASP LYS SEQRES 24 A 309 GLY CYS LYS ALA VAL LEU TRP ALA GLN PRO HET BU3 A 701 16 HETNAM BU3 (R,R)-2,3-BUTANEDIOL FORMUL 2 BU3 C4 H10 O2 FORMUL 3 HOH *220(H2 O) SHEET 1 AA1 4 THR A 313 ASP A 319 0 SHEET 2 AA1 4 LYS A 600 ALA A 605 -1 O LEU A 603 N CYS A 316 SHEET 3 AA1 4 VAL A 592 ASP A 596 -1 N VAL A 592 O TRP A 604 SHEET 4 AA1 4 ILE A 580 TRP A 585 -1 N ALA A 584 O VAL A 593 SHEET 1 AA2 4 VAL A 325 PHE A 330 0 SHEET 2 AA2 4 LEU A 336 GLY A 341 -1 O ALA A 338 N GLN A 329 SHEET 3 AA2 4 VAL A 346 VAL A 351 -1 O TRP A 349 N LEU A 337 SHEET 4 AA2 4 CYS A 356 LEU A 362 -1 O LEU A 362 N VAL A 346 SHEET 1 AA3 4 ILE A 369 PHE A 374 0 SHEET 2 AA3 4 TYR A 380 SER A 385 -1 O LEU A 382 N GLU A 373 SHEET 3 AA3 4 SER A 390 THR A 394 -1 O ARG A 391 N ALA A 383 SHEET 4 AA3 4 ARG A 399 LEU A 404 -1 O LEU A 404 N SER A 390 SHEET 1 AA4 4 VAL A 411 PHE A 416 0 SHEET 2 AA4 4 ARG A 422 SER A 427 -1 O VAL A 424 N LYS A 415 SHEET 3 AA4 4 THR A 431 ASP A 436 -1 O TRP A 435 N ILE A 423 SHEET 4 AA4 4 VAL A 441 PHE A 447 -1 O VAL A 446 N LEU A 432 SHEET 1 AA5 4 CYS A 452 CYS A 457 0 SHEET 2 AA5 4 CYS A 461 HIS A 466 -1 O MET A 463 N VAL A 456 SHEET 3 AA5 4 LYS A 470 ASP A 475 -1 O TRP A 474 N VAL A 462 SHEET 4 AA5 4 SER A 480 GLU A 486 -1 O ARG A 483 N PHE A 473 SHEET 1 AA6 4 ILE A 491 LEU A 496 0 SHEET 2 AA6 4 GLU A 502 SER A 507 -1 O LEU A 504 N ASP A 495 SHEET 3 AA6 4 LEU A 511 ASP A 516 -1 O ILE A 515 N LEU A 503 SHEET 4 AA6 4 ALA A 521 PHE A 526 -1 O ALA A 521 N ASP A 516 SHEET 1 AA7 4 VAL A 540 PHE A 542 0 SHEET 2 AA7 4 TYR A 548 GLY A 552 -1 O ALA A 550 N VAL A 541 SHEET 3 AA7 4 LEU A 558 SER A 562 -1 O TYR A 559 N ALA A 551 SHEET 4 AA7 4 VAL A 568 LEU A 572 -1 O LEU A 572 N LEU A 558 SITE 1 AC1 3 LYS A 347 TRP A 349 ASP A 397 CRYST1 157.550 38.220 45.620 90.00 105.74 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006347 0.000000 0.001789 0.00000 SCALE2 0.000000 0.026164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022774 0.00000