data_5NYB # _entry.id 5NYB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5NYB pdb_00005nyb 10.2210/pdb5nyb/pdb WWPDB D_1200004930 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5NYB _pdbx_database_status.recvd_initial_deposition_date 2017-05-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kimani, S.W.' 1 ? 'Sewell, B.T.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Substrate recognition by an amidase of the nitrilase superfamily' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kimani, S.W.' 1 ? primary 'Venter, G.A.' 2 ? primary 'Sewell, B.T.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Amidase 30068.686 1 3.5.1.4 C145A ? ? 2 non-polymer syn adipamide 144.172 1 ? ? ? ? 3 water nat water 18.015 62 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQ VDAARSRLRGIARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGPEEKAAFVPGEQPPPVLSWGGRQL SLLVAYDVEFPEMVRAAAARGAQLVLVPTALAGDETSVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVVGPAGQ PLGELGVEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQ VDAARSRLRGIARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGPEEKAAFVPGEQPPPVLSWGGRQL SLLVAYDVEFPEMVRAAAARGAQLVLVPTALAGDETSVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVVGPAGQ PLGELGVEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 adipamide 9EE 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ARG n 1 23 ILE n 1 24 ALA n 1 25 LEU n 1 26 MET n 1 27 GLN n 1 28 HIS n 1 29 THR n 1 30 ALA n 1 31 ARG n 1 32 PRO n 1 33 LEU n 1 34 ASP n 1 35 PRO n 1 36 GLN n 1 37 HIS n 1 38 ASN n 1 39 LEU n 1 40 ASP n 1 41 LEU n 1 42 ILE n 1 43 ASP n 1 44 ASP n 1 45 ALA n 1 46 ALA n 1 47 ALA n 1 48 ARG n 1 49 ALA n 1 50 SER n 1 51 GLU n 1 52 GLN n 1 53 GLY n 1 54 ALA n 1 55 GLN n 1 56 LEU n 1 57 LEU n 1 58 LEU n 1 59 THR n 1 60 PRO n 1 61 GLU n 1 62 LEU n 1 63 PHE n 1 64 GLY n 1 65 PHE n 1 66 GLY n 1 67 TYR n 1 68 VAL n 1 69 PRO n 1 70 SER n 1 71 GLN n 1 72 ILE n 1 73 CYS n 1 74 ALA n 1 75 GLN n 1 76 VAL n 1 77 SER n 1 78 ALA n 1 79 GLU n 1 80 GLN n 1 81 VAL n 1 82 ASP n 1 83 ALA n 1 84 ALA n 1 85 ARG n 1 86 SER n 1 87 ARG n 1 88 LEU n 1 89 ARG n 1 90 GLY n 1 91 ILE n 1 92 ALA n 1 93 ARG n 1 94 ASP n 1 95 ARG n 1 96 GLY n 1 97 ILE n 1 98 ALA n 1 99 LEU n 1 100 VAL n 1 101 TRP n 1 102 SER n 1 103 LEU n 1 104 PRO n 1 105 GLY n 1 106 PRO n 1 107 GLU n 1 108 GLY n 1 109 PRO n 1 110 GLU n 1 111 GLN n 1 112 ARG n 1 113 GLY n 1 114 ILE n 1 115 THR n 1 116 ALA n 1 117 GLU n 1 118 LEU n 1 119 ALA n 1 120 ASP n 1 121 GLU n 1 122 HIS n 1 123 GLY n 1 124 GLU n 1 125 VAL n 1 126 LEU n 1 127 ALA n 1 128 SER n 1 129 TYR n 1 130 GLN n 1 131 LYS n 1 132 VAL n 1 133 GLN n 1 134 LEU n 1 135 TYR n 1 136 GLY n 1 137 PRO n 1 138 GLU n 1 139 GLU n 1 140 LYS n 1 141 ALA n 1 142 ALA n 1 143 PHE n 1 144 VAL n 1 145 PRO n 1 146 GLY n 1 147 GLU n 1 148 GLN n 1 149 PRO n 1 150 PRO n 1 151 PRO n 1 152 VAL n 1 153 LEU n 1 154 SER n 1 155 TRP n 1 156 GLY n 1 157 GLY n 1 158 ARG n 1 159 GLN n 1 160 LEU n 1 161 SER n 1 162 LEU n 1 163 LEU n 1 164 VAL n 1 165 ALA n 1 166 TYR n 1 167 ASP n 1 168 VAL n 1 169 GLU n 1 170 PHE n 1 171 PRO n 1 172 GLU n 1 173 MET n 1 174 VAL n 1 175 ARG n 1 176 ALA n 1 177 ALA n 1 178 ALA n 1 179 ALA n 1 180 ARG n 1 181 GLY n 1 182 ALA n 1 183 GLN n 1 184 LEU n 1 185 VAL n 1 186 LEU n 1 187 VAL n 1 188 PRO n 1 189 THR n 1 190 ALA n 1 191 LEU n 1 192 ALA n 1 193 GLY n 1 194 ASP n 1 195 GLU n 1 196 THR n 1 197 SER n 1 198 VAL n 1 199 PRO n 1 200 GLY n 1 201 ILE n 1 202 LEU n 1 203 LEU n 1 204 PRO n 1 205 ALA n 1 206 ARG n 1 207 ALA n 1 208 VAL n 1 209 GLU n 1 210 ASN n 1 211 GLY n 1 212 ILE n 1 213 THR n 1 214 LEU n 1 215 ALA n 1 216 TYR n 1 217 ALA n 1 218 ASN n 1 219 HIS n 1 220 CYS n 1 221 GLY n 1 222 PRO n 1 223 GLU n 1 224 GLY n 1 225 GLY n 1 226 LEU n 1 227 VAL n 1 228 PHE n 1 229 ASP n 1 230 GLY n 1 231 GLY n 1 232 SER n 1 233 VAL n 1 234 VAL n 1 235 VAL n 1 236 GLY n 1 237 PRO n 1 238 ALA n 1 239 GLY n 1 240 GLN n 1 241 PRO n 1 242 LEU n 1 243 GLY n 1 244 GLU n 1 245 LEU n 1 246 GLY n 1 247 VAL n 1 248 GLU n 1 249 PRO n 1 250 GLY n 1 251 LEU n 1 252 LEU n 1 253 VAL n 1 254 VAL n 1 255 ASP n 1 256 LEU n 1 257 PRO n 1 258 ASP n 1 259 GLN n 1 260 SER n 1 261 GLN n 1 262 ASP n 1 263 ALA n 1 264 GLY n 1 265 SER n 1 266 ASP n 1 267 SER n 1 268 ALA n 1 269 ASP n 1 270 TYR n 1 271 LEU n 1 272 GLN n 1 273 ASP n 1 274 ARG n 1 275 ARG n 1 276 ALA n 1 277 GLU n 1 278 LEU n 1 279 HIS n 1 280 ARG n 1 281 ASN n 1 282 TRP n 1 283 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 283 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Nit2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nesterenkonia sp. 10004' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 501897 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9EE non-polymer . adipamide ? 'C6 H12 N2 O2' 144.172 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 -7 GLY GLY A . n A 1 14 LEU 14 -6 -6 LEU LEU A . n A 1 15 VAL 15 -5 -5 VAL VAL A . n A 1 16 PRO 16 -4 -4 PRO PRO A . n A 1 17 ARG 17 -3 -3 ARG ARG A . n A 1 18 GLY 18 -2 -2 GLY GLY A . n A 1 19 SER 19 -1 -1 SER SER A . n A 1 20 HIS 20 0 0 HIS HIS A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 ARG 22 2 2 ARG ARG A . n A 1 23 ILE 23 3 3 ILE ILE A . n A 1 24 ALA 24 4 4 ALA ALA A . n A 1 25 LEU 25 5 5 LEU LEU A . n A 1 26 MET 26 6 6 MET MET A . n A 1 27 GLN 27 7 7 GLN GLN A . n A 1 28 HIS 28 8 8 HIS HIS A . n A 1 29 THR 29 9 9 THR THR A . n A 1 30 ALA 30 10 10 ALA ALA A . n A 1 31 ARG 31 11 11 ARG ARG A . n A 1 32 PRO 32 12 12 PRO PRO A . n A 1 33 LEU 33 13 13 LEU LEU A . n A 1 34 ASP 34 14 14 ASP ASP A . n A 1 35 PRO 35 15 15 PRO PRO A . n A 1 36 GLN 36 16 16 GLN GLN A . n A 1 37 HIS 37 17 17 HIS HIS A . n A 1 38 ASN 38 18 18 ASN ASN A . n A 1 39 LEU 39 19 19 LEU LEU A . n A 1 40 ASP 40 20 20 ASP ASP A . n A 1 41 LEU 41 21 21 LEU LEU A . n A 1 42 ILE 42 22 22 ILE ILE A . n A 1 43 ASP 43 23 23 ASP ASP A . n A 1 44 ASP 44 24 24 ASP ASP A . n A 1 45 ALA 45 25 25 ALA ALA A . n A 1 46 ALA 46 26 26 ALA ALA A . n A 1 47 ALA 47 27 27 ALA ALA A . n A 1 48 ARG 48 28 28 ARG ARG A . n A 1 49 ALA 49 29 29 ALA ALA A . n A 1 50 SER 50 30 30 SER SER A . n A 1 51 GLU 51 31 31 GLU GLU A . n A 1 52 GLN 52 32 32 GLN GLN A . n A 1 53 GLY 53 33 33 GLY GLY A . n A 1 54 ALA 54 34 34 ALA ALA A . n A 1 55 GLN 55 35 35 GLN GLN A . n A 1 56 LEU 56 36 36 LEU LEU A . n A 1 57 LEU 57 37 37 LEU LEU A . n A 1 58 LEU 58 38 38 LEU LEU A . n A 1 59 THR 59 39 39 THR THR A . n A 1 60 PRO 60 40 40 PRO PRO A . n A 1 61 GLU 61 41 41 GLU GLU A . n A 1 62 LEU 62 42 42 LEU LEU A . n A 1 63 PHE 63 43 43 PHE PHE A . n A 1 64 GLY 64 44 44 GLY GLY A . n A 1 65 PHE 65 45 45 PHE PHE A . n A 1 66 GLY 66 46 46 GLY GLY A . n A 1 67 TYR 67 47 47 TYR TYR A . n A 1 68 VAL 68 48 48 VAL VAL A . n A 1 69 PRO 69 49 49 PRO PRO A . n A 1 70 SER 70 50 50 SER SER A . n A 1 71 GLN 71 51 51 GLN GLN A . n A 1 72 ILE 72 52 52 ILE ILE A . n A 1 73 CYS 73 53 53 CYS CYS A . n A 1 74 ALA 74 54 54 ALA ALA A . n A 1 75 GLN 75 55 55 GLN GLN A . n A 1 76 VAL 76 56 56 VAL VAL A . n A 1 77 SER 77 57 57 SER SER A . n A 1 78 ALA 78 58 58 ALA ALA A . n A 1 79 GLU 79 59 59 GLU GLU A . n A 1 80 GLN 80 60 60 GLN GLN A . n A 1 81 VAL 81 61 61 VAL VAL A . n A 1 82 ASP 82 62 62 ASP ASP A . n A 1 83 ALA 83 63 63 ALA ALA A . n A 1 84 ALA 84 64 64 ALA ALA A . n A 1 85 ARG 85 65 65 ARG ARG A . n A 1 86 SER 86 66 66 SER SER A . n A 1 87 ARG 87 67 67 ARG ARG A . n A 1 88 LEU 88 68 68 LEU LEU A . n A 1 89 ARG 89 69 69 ARG ARG A . n A 1 90 GLY 90 70 70 GLY GLY A . n A 1 91 ILE 91 71 71 ILE ILE A . n A 1 92 ALA 92 72 72 ALA ALA A . n A 1 93 ARG 93 73 73 ARG ARG A . n A 1 94 ASP 94 74 74 ASP ASP A . n A 1 95 ARG 95 75 75 ARG ARG A . n A 1 96 GLY 96 76 76 GLY GLY A . n A 1 97 ILE 97 77 77 ILE ILE A . n A 1 98 ALA 98 78 78 ALA ALA A . n A 1 99 LEU 99 79 79 LEU LEU A . n A 1 100 VAL 100 80 80 VAL VAL A . n A 1 101 TRP 101 81 81 TRP TRP A . n A 1 102 SER 102 82 82 SER SER A . n A 1 103 LEU 103 83 83 LEU LEU A . n A 1 104 PRO 104 84 84 PRO PRO A . n A 1 105 GLY 105 85 85 GLY GLY A . n A 1 106 PRO 106 86 86 PRO PRO A . n A 1 107 GLU 107 87 87 GLU GLU A . n A 1 108 GLY 108 88 88 GLY GLY A . n A 1 109 PRO 109 89 89 PRO PRO A . n A 1 110 GLU 110 90 90 GLU GLU A . n A 1 111 GLN 111 91 91 GLN GLN A . n A 1 112 ARG 112 92 92 ARG ARG A . n A 1 113 GLY 113 93 93 GLY GLY A . n A 1 114 ILE 114 94 94 ILE ILE A . n A 1 115 THR 115 95 95 THR THR A . n A 1 116 ALA 116 96 96 ALA ALA A . n A 1 117 GLU 117 97 97 GLU GLU A . n A 1 118 LEU 118 98 98 LEU LEU A . n A 1 119 ALA 119 99 99 ALA ALA A . n A 1 120 ASP 120 100 100 ASP ASP A . n A 1 121 GLU 121 101 101 GLU GLU A . n A 1 122 HIS 122 102 102 HIS HIS A . n A 1 123 GLY 123 103 103 GLY GLY A . n A 1 124 GLU 124 104 104 GLU GLU A . n A 1 125 VAL 125 105 105 VAL VAL A . n A 1 126 LEU 126 106 106 LEU LEU A . n A 1 127 ALA 127 107 107 ALA ALA A . n A 1 128 SER 128 108 108 SER SER A . n A 1 129 TYR 129 109 109 TYR TYR A . n A 1 130 GLN 130 110 110 GLN GLN A . n A 1 131 LYS 131 111 111 LYS LYS A . n A 1 132 VAL 132 112 112 VAL VAL A . n A 1 133 GLN 133 113 113 GLN GLN A . n A 1 134 LEU 134 114 114 LEU LEU A . n A 1 135 TYR 135 115 115 TYR TYR A . n A 1 136 GLY 136 116 116 GLY GLY A . n A 1 137 PRO 137 117 117 PRO PRO A . n A 1 138 GLU 138 118 118 GLU GLU A . n A 1 139 GLU 139 119 119 GLU GLU A . n A 1 140 LYS 140 120 120 LYS LYS A . n A 1 141 ALA 141 121 121 ALA ALA A . n A 1 142 ALA 142 122 122 ALA ALA A . n A 1 143 PHE 143 123 123 PHE PHE A . n A 1 144 VAL 144 124 124 VAL VAL A . n A 1 145 PRO 145 125 125 PRO PRO A . n A 1 146 GLY 146 126 126 GLY GLY A . n A 1 147 GLU 147 127 127 GLU GLU A . n A 1 148 GLN 148 128 128 GLN GLN A . n A 1 149 PRO 149 129 129 PRO PRO A . n A 1 150 PRO 150 130 130 PRO PRO A . n A 1 151 PRO 151 131 131 PRO PRO A . n A 1 152 VAL 152 132 132 VAL VAL A . n A 1 153 LEU 153 133 133 LEU LEU A . n A 1 154 SER 154 134 134 SER SER A . n A 1 155 TRP 155 135 135 TRP TRP A . n A 1 156 GLY 156 136 136 GLY GLY A . n A 1 157 GLY 157 137 137 GLY GLY A . n A 1 158 ARG 158 138 138 ARG ARG A . n A 1 159 GLN 159 139 139 GLN GLN A . n A 1 160 LEU 160 140 140 LEU LEU A . n A 1 161 SER 161 141 141 SER SER A . n A 1 162 LEU 162 142 142 LEU LEU A . n A 1 163 LEU 163 143 143 LEU LEU A . n A 1 164 VAL 164 144 144 VAL VAL A . n A 1 165 ALA 165 145 145 ALA ALA A . n A 1 166 TYR 166 146 146 TYR TYR A . n A 1 167 ASP 167 147 147 ASP ASP A . n A 1 168 VAL 168 148 148 VAL VAL A . n A 1 169 GLU 169 149 149 GLU GLU A . n A 1 170 PHE 170 150 150 PHE PHE A . n A 1 171 PRO 171 151 151 PRO PRO A . n A 1 172 GLU 172 152 152 GLU GLU A . n A 1 173 MET 173 153 153 MET MET A . n A 1 174 VAL 174 154 154 VAL VAL A . n A 1 175 ARG 175 155 155 ARG ARG A . n A 1 176 ALA 176 156 156 ALA ALA A . n A 1 177 ALA 177 157 157 ALA ALA A . n A 1 178 ALA 178 158 158 ALA ALA A . n A 1 179 ALA 179 159 159 ALA ALA A . n A 1 180 ARG 180 160 160 ARG ARG A . n A 1 181 GLY 181 161 161 GLY GLY A . n A 1 182 ALA 182 162 162 ALA ALA A . n A 1 183 GLN 183 163 163 GLN GLN A . n A 1 184 LEU 184 164 164 LEU LEU A . n A 1 185 VAL 185 165 165 VAL VAL A . n A 1 186 LEU 186 166 166 LEU LEU A . n A 1 187 VAL 187 167 167 VAL VAL A . n A 1 188 PRO 188 168 168 PRO PRO A . n A 1 189 THR 189 169 169 THR THR A . n A 1 190 ALA 190 170 170 ALA ALA A . n A 1 191 LEU 191 171 171 LEU LEU A . n A 1 192 ALA 192 172 172 ALA ALA A . n A 1 193 GLY 193 173 173 GLY GLY A . n A 1 194 ASP 194 174 174 ASP ASP A . n A 1 195 GLU 195 175 175 GLU GLU A . n A 1 196 THR 196 176 176 THR THR A . n A 1 197 SER 197 177 177 SER SER A . n A 1 198 VAL 198 178 178 VAL VAL A . n A 1 199 PRO 199 179 179 PRO PRO A . n A 1 200 GLY 200 180 180 GLY GLY A . n A 1 201 ILE 201 181 181 ILE ILE A . n A 1 202 LEU 202 182 182 LEU LEU A . n A 1 203 LEU 203 183 183 LEU LEU A . n A 1 204 PRO 204 184 184 PRO PRO A . n A 1 205 ALA 205 185 185 ALA ALA A . n A 1 206 ARG 206 186 186 ARG ARG A . n A 1 207 ALA 207 187 187 ALA ALA A . n A 1 208 VAL 208 188 188 VAL VAL A . n A 1 209 GLU 209 189 189 GLU GLU A . n A 1 210 ASN 210 190 190 ASN ASN A . n A 1 211 GLY 211 191 191 GLY GLY A . n A 1 212 ILE 212 192 192 ILE ILE A . n A 1 213 THR 213 193 193 THR THR A . n A 1 214 LEU 214 194 194 LEU LEU A . n A 1 215 ALA 215 195 195 ALA ALA A . n A 1 216 TYR 216 196 196 TYR TYR A . n A 1 217 ALA 217 197 197 ALA ALA A . n A 1 218 ASN 218 198 198 ASN ASN A . n A 1 219 HIS 219 199 199 HIS HIS A . n A 1 220 CYS 220 200 200 CYS CYS A . n A 1 221 GLY 221 201 201 GLY GLY A . n A 1 222 PRO 222 202 202 PRO PRO A . n A 1 223 GLU 223 203 203 GLU GLU A . n A 1 224 GLY 224 204 204 GLY GLY A . n A 1 225 GLY 225 205 205 GLY GLY A . n A 1 226 LEU 226 206 206 LEU LEU A . n A 1 227 VAL 227 207 207 VAL VAL A . n A 1 228 PHE 228 208 208 PHE PHE A . n A 1 229 ASP 229 209 209 ASP ASP A . n A 1 230 GLY 230 210 210 GLY GLY A . n A 1 231 GLY 231 211 211 GLY GLY A . n A 1 232 SER 232 212 212 SER SER A . n A 1 233 VAL 233 213 213 VAL VAL A . n A 1 234 VAL 234 214 214 VAL VAL A . n A 1 235 VAL 235 215 215 VAL VAL A . n A 1 236 GLY 236 216 216 GLY GLY A . n A 1 237 PRO 237 217 217 PRO PRO A . n A 1 238 ALA 238 218 218 ALA ALA A . n A 1 239 GLY 239 219 219 GLY GLY A . n A 1 240 GLN 240 220 220 GLN GLN A . n A 1 241 PRO 241 221 221 PRO PRO A . n A 1 242 LEU 242 222 222 LEU LEU A . n A 1 243 GLY 243 223 223 GLY GLY A . n A 1 244 GLU 244 224 224 GLU GLU A . n A 1 245 LEU 245 225 225 LEU LEU A . n A 1 246 GLY 246 226 226 GLY GLY A . n A 1 247 VAL 247 227 227 VAL VAL A . n A 1 248 GLU 248 228 228 GLU GLU A . n A 1 249 PRO 249 229 229 PRO PRO A . n A 1 250 GLY 250 230 230 GLY GLY A . n A 1 251 LEU 251 231 231 LEU LEU A . n A 1 252 LEU 252 232 232 LEU LEU A . n A 1 253 VAL 253 233 233 VAL VAL A . n A 1 254 VAL 254 234 234 VAL VAL A . n A 1 255 ASP 255 235 235 ASP ASP A . n A 1 256 LEU 256 236 236 LEU LEU A . n A 1 257 PRO 257 237 237 PRO PRO A . n A 1 258 ASP 258 238 238 ASP ASP A . n A 1 259 GLN 259 239 ? ? ? A . n A 1 260 SER 260 240 ? ? ? A . n A 1 261 GLN 261 241 ? ? ? A . n A 1 262 ASP 262 242 ? ? ? A . n A 1 263 ALA 263 243 ? ? ? A . n A 1 264 GLY 264 244 ? ? ? A . n A 1 265 SER 265 245 ? ? ? A . n A 1 266 ASP 266 246 ? ? ? A . n A 1 267 SER 267 247 ? ? ? A . n A 1 268 ALA 268 248 248 ALA ALA A . n A 1 269 ASP 269 249 249 ASP ASP A . n A 1 270 TYR 270 250 250 TYR TYR A . n A 1 271 LEU 271 251 251 LEU LEU A . n A 1 272 GLN 272 252 252 GLN GLN A . n A 1 273 ASP 273 253 253 ASP ASP A . n A 1 274 ARG 274 254 254 ARG ARG A . n A 1 275 ARG 275 255 255 ARG ARG A . n A 1 276 ALA 276 256 256 ALA ALA A . n A 1 277 GLU 277 257 257 GLU GLU A . n A 1 278 LEU 278 258 258 LEU LEU A . n A 1 279 HIS 279 259 259 HIS HIS A . n A 1 280 ARG 280 260 260 ARG ARG A . n A 1 281 ASN 281 261 261 ASN ASN A . n A 1 282 TRP 282 262 262 TRP TRP A . n A 1 283 LEU 283 263 263 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9EE 1 301 1 9EE 9EE A . C 3 HOH 1 401 65 HOH HOH A . C 3 HOH 2 402 9 HOH HOH A . C 3 HOH 3 403 21 HOH HOH A . C 3 HOH 4 404 13 HOH HOH A . C 3 HOH 5 405 43 HOH HOH A . C 3 HOH 6 406 58 HOH HOH A . C 3 HOH 7 407 32 HOH HOH A . C 3 HOH 8 408 11 HOH HOH A . C 3 HOH 9 409 4 HOH HOH A . C 3 HOH 10 410 14 HOH HOH A . C 3 HOH 11 411 49 HOH HOH A . C 3 HOH 12 412 10 HOH HOH A . C 3 HOH 13 413 42 HOH HOH A . C 3 HOH 14 414 15 HOH HOH A . C 3 HOH 15 415 19 HOH HOH A . C 3 HOH 16 416 53 HOH HOH A . C 3 HOH 17 417 66 HOH HOH A . C 3 HOH 18 418 12 HOH HOH A . C 3 HOH 19 419 7 HOH HOH A . C 3 HOH 20 420 45 HOH HOH A . C 3 HOH 21 421 17 HOH HOH A . C 3 HOH 22 422 22 HOH HOH A . C 3 HOH 23 423 63 HOH HOH A . C 3 HOH 24 424 27 HOH HOH A . C 3 HOH 25 425 59 HOH HOH A . C 3 HOH 26 426 5 HOH HOH A . C 3 HOH 27 427 3 HOH HOH A . C 3 HOH 28 428 20 HOH HOH A . C 3 HOH 29 429 6 HOH HOH A . C 3 HOH 30 430 50 HOH HOH A . C 3 HOH 31 431 30 HOH HOH A . C 3 HOH 32 432 24 HOH HOH A . C 3 HOH 33 433 56 HOH HOH A . C 3 HOH 34 434 46 HOH HOH A . C 3 HOH 35 435 8 HOH HOH A . C 3 HOH 36 436 38 HOH HOH A . C 3 HOH 37 437 54 HOH HOH A . C 3 HOH 38 438 67 HOH HOH A . C 3 HOH 39 439 35 HOH HOH A . C 3 HOH 40 440 47 HOH HOH A . C 3 HOH 41 441 41 HOH HOH A . C 3 HOH 42 442 18 HOH HOH A . C 3 HOH 43 443 28 HOH HOH A . C 3 HOH 44 444 31 HOH HOH A . C 3 HOH 45 445 26 HOH HOH A . C 3 HOH 46 446 16 HOH HOH A . C 3 HOH 47 447 44 HOH HOH A . C 3 HOH 48 448 64 HOH HOH A . C 3 HOH 49 449 48 HOH HOH A . C 3 HOH 50 450 34 HOH HOH A . C 3 HOH 51 451 36 HOH HOH A . C 3 HOH 52 452 60 HOH HOH A . C 3 HOH 53 453 52 HOH HOH A . C 3 HOH 54 454 61 HOH HOH A . C 3 HOH 55 455 33 HOH HOH A . C 3 HOH 56 456 57 HOH HOH A . C 3 HOH 57 457 69 HOH HOH A . C 3 HOH 58 458 62 HOH HOH A . C 3 HOH 59 459 68 HOH HOH A . C 3 HOH 60 460 39 HOH HOH A . C 3 HOH 61 461 51 HOH HOH A . C 3 HOH 62 462 55 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.length_a 76.254 _cell.length_b 114.769 _cell.length_c 64.842 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 5NYB _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 5NYB _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5NYB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.832 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0 M ammonium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-05-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8856 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.entry_id 5NYB _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 1.880 _reflns.number_obs 23407 _reflns.number_all ? _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.100 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.400 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.500 _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_CC_half ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 106081 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared 1.088 _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.880 1.910 ? ? 1140 ? 0.560 ? ? 0.680 4.400 ? ? ? ? ? ? ? ? 98.300 ? ? ? 1 2 1.910 1.950 ? ? 1124 ? 0.441 ? ? 0.744 4.500 ? ? ? ? ? ? ? ? 98.800 ? ? ? 1 3 1.950 1.980 ? ? 1137 ? 0.425 ? ? 0.734 4.600 ? ? ? ? ? ? ? ? 99.000 ? ? ? 1 4 1.980 2.030 ? ? 1174 ? 0.350 ? ? 0.760 4.500 ? ? ? ? ? ? ? ? 99.700 ? ? ? 1 5 2.030 2.070 ? ? 1134 ? 0.301 ? ? 0.836 4.600 ? ? ? ? ? ? ? ? 99.900 ? ? ? 1 6 2.070 2.120 ? ? 1167 ? 0.275 ? ? 0.843 4.600 ? ? ? ? ? ? ? ? 99.800 ? ? ? 1 7 2.120 2.170 ? ? 1165 ? 0.276 ? ? 0.812 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 8 2.170 2.230 ? ? 1154 ? 0.236 ? ? 0.873 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 9 2.230 2.290 ? ? 1166 ? 0.212 ? ? 0.790 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 10 2.290 2.370 ? ? 1167 ? 0.171 ? ? 0.829 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 11 2.370 2.450 ? ? 1173 ? 0.171 ? ? 0.843 4.600 ? ? ? ? ? ? ? ? 99.900 ? ? ? 1 12 2.450 2.550 ? ? 1168 ? 0.153 ? ? 0.832 4.600 ? ? ? ? ? ? ? ? 99.900 ? ? ? 1 13 2.550 2.670 ? ? 1154 ? 0.121 ? ? 0.864 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 14 2.670 2.810 ? ? 1174 ? 0.109 ? ? 0.907 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 15 2.810 2.980 ? ? 1182 ? 0.097 ? ? 1.153 4.600 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 16 2.980 3.210 ? ? 1172 ? 0.091 ? ? 1.711 4.500 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 17 3.210 3.540 ? ? 1184 ? 0.082 ? ? 2.164 4.500 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 18 3.540 4.050 ? ? 1200 ? 0.063 ? ? 2.162 4.500 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 19 4.050 5.100 ? ? 1204 ? 0.046 ? ? 1.599 4.400 ? ? ? ? ? ? ? ? 100.000 ? ? ? 1 20 5.100 100.000 ? ? 1268 ? 0.041 ? ? 1.569 4.200 ? ? ? ? ? ? ? ? 98.800 ? ? ? # _refine.entry_id 5NYB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.8800 _refine.ls_d_res_low 32.8700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3400 _refine.ls_number_reflns_obs 22154 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1702 _refine.ls_R_factor_R_work 0.1679 _refine.ls_wR_factor_R_work 0.1462 _refine.ls_R_factor_R_free 0.2152 _refine.ls_wR_factor_R_free 0.1860 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1199 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.3980 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0100 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[3][3] -0.0000 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9400 _refine.overall_SU_R_Cruickshank_DPI 0.1229 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free 0.1252 _refine.pdbx_overall_ESU_R 0.1230 _refine.pdbx_overall_ESU_R_Free 0.1250 _refine.overall_SU_ML 0.0980 _refine.overall_SU_B 3.4460 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3HKX _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8304 _refine.B_iso_max 84.770 _refine.B_iso_min 14.450 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8800 _refine_hist.d_res_low 32.8700 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 2033 _refine_hist.pdbx_number_residues_total 262 _refine_hist.pdbx_B_iso_mean_ligand 32.82 _refine_hist.pdbx_B_iso_mean_solvent 32.96 _refine_hist.pdbx_number_atoms_protein 1961 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 2019 0.018 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1948 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2757 1.756 1.989 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4474 1.029 3.003 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 264 6.117 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 88 37.680 23.864 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 301 12.633 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17 19.873 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 307 0.115 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2344 0.010 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 441 0.002 0.020 ? ? # _refine_ls_shell.d_res_high 1.8810 _refine_ls_shell.d_res_low 1.9290 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 93.5600 _refine_ls_shell.number_reflns_R_work 1497 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2650 _refine_ls_shell.R_factor_R_free 0.3000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 100 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.number_reflns_all 1597 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 5NYB _struct.title 'A C145A mutant of Nesterenkonia AN1 amidase bound to adipamide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5NYB _struct_keywords.text 'active site, amidase, amide, adipamide, cysteine 145, alanine 145, nitrilase superfamily, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D0VWZ1_9MICC _struct_ref.pdbx_db_accession D0VWZ1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALV WSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGPEEKAAFVPGEQPPPVLSWGGRQLSLLVCYDVEFPEMVRAAAAR GAQLVLVPTALAGDETSVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVVGPAGQPLGELGVEPGLLVVDLPDQS QDAGSDSADYLQDRRAELHRNWL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5NYB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 283 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D0VWZ1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 263 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 263 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5NYB MET A 1 ? UNP D0VWZ1 ? ? 'initiating methionine' -19 1 1 5NYB GLY A 2 ? UNP D0VWZ1 ? ? 'expression tag' -18 2 1 5NYB SER A 3 ? UNP D0VWZ1 ? ? 'expression tag' -17 3 1 5NYB SER A 4 ? UNP D0VWZ1 ? ? 'expression tag' -16 4 1 5NYB HIS A 5 ? UNP D0VWZ1 ? ? 'expression tag' -15 5 1 5NYB HIS A 6 ? UNP D0VWZ1 ? ? 'expression tag' -14 6 1 5NYB HIS A 7 ? UNP D0VWZ1 ? ? 'expression tag' -13 7 1 5NYB HIS A 8 ? UNP D0VWZ1 ? ? 'expression tag' -12 8 1 5NYB HIS A 9 ? UNP D0VWZ1 ? ? 'expression tag' -11 9 1 5NYB HIS A 10 ? UNP D0VWZ1 ? ? 'expression tag' -10 10 1 5NYB SER A 11 ? UNP D0VWZ1 ? ? 'expression tag' -9 11 1 5NYB SER A 12 ? UNP D0VWZ1 ? ? 'expression tag' -8 12 1 5NYB GLY A 13 ? UNP D0VWZ1 ? ? 'expression tag' -7 13 1 5NYB LEU A 14 ? UNP D0VWZ1 ? ? 'expression tag' -6 14 1 5NYB VAL A 15 ? UNP D0VWZ1 ? ? 'expression tag' -5 15 1 5NYB PRO A 16 ? UNP D0VWZ1 ? ? 'expression tag' -4 16 1 5NYB ARG A 17 ? UNP D0VWZ1 ? ? 'expression tag' -3 17 1 5NYB GLY A 18 ? UNP D0VWZ1 ? ? 'expression tag' -2 18 1 5NYB SER A 19 ? UNP D0VWZ1 ? ? 'expression tag' -1 19 1 5NYB HIS A 20 ? UNP D0VWZ1 ? ? 'expression tag' 0 20 1 5NYB ALA A 165 ? UNP D0VWZ1 CYS 145 'engineered mutation' 145 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3580 ? 1 MORE -11 ? 1 'SSA (A^2)' 19870 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Biological assembly is a dimer' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 34 ? GLN A 52 ? ASP A 14 GLN A 32 1 ? 19 HELX_P HELX_P2 AA2 VAL A 68 ? VAL A 76 ? VAL A 48 VAL A 56 1 ? 9 HELX_P HELX_P3 AA3 SER A 77 ? GLY A 96 ? SER A 57 GLY A 76 1 ? 20 HELX_P HELX_P4 AA4 TYR A 135 ? PHE A 143 ? TYR A 115 PHE A 123 1 ? 9 HELX_P HELX_P5 AA5 VAL A 164 ? GLU A 169 ? VAL A 144 GLU A 149 5 ? 6 HELX_P HELX_P6 AA6 PHE A 170 ? ARG A 180 ? PHE A 150 ARG A 160 1 ? 11 HELX_P HELX_P7 AA7 THR A 196 ? ILE A 201 ? THR A 176 ILE A 181 1 ? 6 HELX_P HELX_P8 AA8 ILE A 201 ? GLY A 211 ? ILE A 181 GLY A 191 1 ? 11 HELX_P HELX_P9 AA9 ASP A 269 ? ARG A 274 ? ASP A 249 ARG A 254 1 ? 6 HELX_P HELX_P10 AB1 ARG A 275 ? LEU A 283 ? ARG A 255 LEU A 263 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 125 ? GLN A 130 ? VAL A 105 GLN A 110 AA1 2 THR A 115 ? ALA A 119 ? THR A 95 ALA A 99 AA1 3 ALA A 98 ? TRP A 101 ? ALA A 78 TRP A 81 AA1 4 LEU A 56 ? LEU A 58 ? LEU A 36 LEU A 38 AA1 5 SER A 19 ? GLN A 27 ? SER A -1 GLN A 7 AA1 6 GLY A 250 ? PRO A 257 ? GLY A 230 PRO A 237 AA2 1 VAL A 152 ? TRP A 155 ? VAL A 132 TRP A 135 AA2 2 ARG A 158 ? LEU A 162 ? ARG A 138 LEU A 142 AA2 3 LEU A 184 ? PRO A 188 ? LEU A 164 PRO A 168 AA2 4 THR A 213 ? ALA A 217 ? THR A 193 ALA A 197 AA2 5 VAL A 233 ? VAL A 235 ? VAL A 213 VAL A 215 AA2 6 PRO A 241 ? GLU A 244 ? PRO A 221 GLU A 224 AA3 1 CYS A 220 ? GLU A 223 ? CYS A 200 GLU A 203 AA3 2 LEU A 226 ? ASP A 229 ? LEU A 206 ASP A 209 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 126 ? O LEU A 106 N LEU A 118 ? N LEU A 98 AA1 2 3 O ALA A 119 ? O ALA A 99 N LEU A 99 ? N LEU A 79 AA1 3 4 O VAL A 100 ? O VAL A 80 N LEU A 57 ? N LEU A 37 AA1 4 5 O LEU A 58 ? O LEU A 38 N ALA A 24 ? N ALA A 4 AA1 5 6 N MET A 21 ? N MET A 1 O LEU A 256 ? O LEU A 236 AA2 1 2 N LEU A 153 ? N LEU A 133 O LEU A 160 ? O LEU A 140 AA2 2 3 N SER A 161 ? N SER A 141 O LEU A 186 ? O LEU A 166 AA2 3 4 N VAL A 185 ? N VAL A 165 O ALA A 215 ? O ALA A 195 AA2 4 5 N TYR A 216 ? N TYR A 196 O VAL A 233 ? O VAL A 213 AA2 5 6 N VAL A 234 ? N VAL A 214 O LEU A 242 ? O LEU A 222 AA3 1 2 N GLU A 223 ? N GLU A 203 O LEU A 226 ? O LEU A 206 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 9EE _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'binding site for residue 9EE A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 GLU A 61 ? GLU A 41 . ? 1_555 ? 2 AC1 11 TYR A 67 ? TYR A 47 . ? 1_555 ? 3 AC1 11 LYS A 131 ? LYS A 111 . ? 1_555 ? 4 AC1 11 TYR A 135 ? TYR A 115 . ? 1_555 ? 5 AC1 11 GLU A 139 ? GLU A 119 . ? 1_555 ? 6 AC1 11 ALA A 165 ? ALA A 145 . ? 1_555 ? 7 AC1 11 TYR A 166 ? TYR A 146 . ? 1_555 ? 8 AC1 11 GLU A 169 ? GLU A 149 . ? 1_555 ? 9 AC1 11 ALA A 190 ? ALA A 170 . ? 1_555 ? 10 AC1 11 GLU A 195 ? GLU A 175 . ? 1_555 ? 11 AC1 11 TYR A 270 ? TYR A 250 . ? 4_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 138 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 PRO _pdbx_validate_close_contact.auth_seq_id_2 237 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ A ARG 138 ? ? NH1 A ARG 138 ? ? 1.413 1.326 0.087 0.013 N 2 1 CZ A ARG 138 ? ? NH2 A ARG 138 ? ? 1.415 1.326 0.089 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 14 ? ? CG A ASP 14 ? ? OD2 A ASP 14 ? ? 112.84 118.30 -5.46 0.90 N 2 1 NE A ARG 138 ? ? CZ A ARG 138 ? ? NH1 A ARG 138 ? ? 117.27 120.30 -3.03 0.50 N 3 1 NE A ARG 155 ? ? CZ A ARG 155 ? ? NH1 A ARG 155 ? ? 123.49 120.30 3.19 0.50 N 4 1 NE A ARG 160 ? ? CZ A ARG 160 ? ? NH2 A ARG 160 ? ? 116.26 120.30 -4.04 0.50 N 5 1 NE A ARG 260 ? ? CZ A ARG 260 ? ? NH1 A ARG 260 ? ? 123.70 120.30 3.40 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 145 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 47.79 _pdbx_validate_torsion.psi -116.66 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 417 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLN 239 ? A GLN 259 14 1 Y 1 A SER 240 ? A SER 260 15 1 Y 1 A GLN 241 ? A GLN 261 16 1 Y 1 A ASP 242 ? A ASP 262 17 1 Y 1 A ALA 243 ? A ALA 263 18 1 Y 1 A GLY 244 ? A GLY 264 19 1 Y 1 A SER 245 ? A SER 265 20 1 Y 1 A ASP 246 ? A ASP 266 21 1 Y 1 A SER 247 ? A SER 267 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 9EE NAG N N N 1 9EE CAB C N N 2 9EE OAH O N N 3 9EE CAA C N N 4 9EE CAC C N N 5 9EE CAD C N N 6 9EE CAE C N N 7 9EE CAF C N N 8 9EE OAI O N N 9 9EE NAJ N N N 10 9EE H1 H N N 11 9EE H2 H N N 12 9EE H3 H N N 13 9EE H4 H N N 14 9EE H5 H N N 15 9EE H6 H N N 16 9EE H7 H N N 17 9EE H8 H N N 18 9EE H9 H N N 19 9EE H10 H N N 20 9EE H11 H N N 21 9EE H12 H N N 22 ALA N N N N 23 ALA CA C N S 24 ALA C C N N 25 ALA O O N N 26 ALA CB C N N 27 ALA OXT O N N 28 ALA H H N N 29 ALA H2 H N N 30 ALA HA H N N 31 ALA HB1 H N N 32 ALA HB2 H N N 33 ALA HB3 H N N 34 ALA HXT H N N 35 ARG N N N N 36 ARG CA C N S 37 ARG C C N N 38 ARG O O N N 39 ARG CB C N N 40 ARG CG C N N 41 ARG CD C N N 42 ARG NE N N N 43 ARG CZ C N N 44 ARG NH1 N N N 45 ARG NH2 N N N 46 ARG OXT O N N 47 ARG H H N N 48 ARG H2 H N N 49 ARG HA H N N 50 ARG HB2 H N N 51 ARG HB3 H N N 52 ARG HG2 H N N 53 ARG HG3 H N N 54 ARG HD2 H N N 55 ARG HD3 H N N 56 ARG HE H N N 57 ARG HH11 H N N 58 ARG HH12 H N N 59 ARG HH21 H N N 60 ARG HH22 H N N 61 ARG HXT H N N 62 ASN N N N N 63 ASN CA C N S 64 ASN C C N N 65 ASN O O N N 66 ASN CB C N N 67 ASN CG C N N 68 ASN OD1 O N N 69 ASN ND2 N N N 70 ASN OXT O N N 71 ASN H H N N 72 ASN H2 H N N 73 ASN HA H N N 74 ASN HB2 H N N 75 ASN HB3 H N N 76 ASN HD21 H N N 77 ASN HD22 H N N 78 ASN HXT H N N 79 ASP N N N N 80 ASP CA C N S 81 ASP C C N N 82 ASP O O N N 83 ASP CB C N N 84 ASP CG C N N 85 ASP OD1 O N N 86 ASP OD2 O N N 87 ASP OXT O N N 88 ASP H H N N 89 ASP H2 H N N 90 ASP HA H N N 91 ASP HB2 H N N 92 ASP HB3 H N N 93 ASP HD2 H N N 94 ASP HXT H N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HIS N N N N 159 HIS CA C N S 160 HIS C C N N 161 HIS O O N N 162 HIS CB C N N 163 HIS CG C Y N 164 HIS ND1 N Y N 165 HIS CD2 C Y N 166 HIS CE1 C Y N 167 HIS NE2 N Y N 168 HIS OXT O N N 169 HIS H H N N 170 HIS H2 H N N 171 HIS HA H N N 172 HIS HB2 H N N 173 HIS HB3 H N N 174 HIS HD1 H N N 175 HIS HD2 H N N 176 HIS HE1 H N N 177 HIS HE2 H N N 178 HIS HXT H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 ILE N N N N 183 ILE CA C N S 184 ILE C C N N 185 ILE O O N N 186 ILE CB C N S 187 ILE CG1 C N N 188 ILE CG2 C N N 189 ILE CD1 C N N 190 ILE OXT O N N 191 ILE H H N N 192 ILE H2 H N N 193 ILE HA H N N 194 ILE HB H N N 195 ILE HG12 H N N 196 ILE HG13 H N N 197 ILE HG21 H N N 198 ILE HG22 H N N 199 ILE HG23 H N N 200 ILE HD11 H N N 201 ILE HD12 H N N 202 ILE HD13 H N N 203 ILE HXT H N N 204 LEU N N N N 205 LEU CA C N S 206 LEU C C N N 207 LEU O O N N 208 LEU CB C N N 209 LEU CG C N N 210 LEU CD1 C N N 211 LEU CD2 C N N 212 LEU OXT O N N 213 LEU H H N N 214 LEU H2 H N N 215 LEU HA H N N 216 LEU HB2 H N N 217 LEU HB3 H N N 218 LEU HG H N N 219 LEU HD11 H N N 220 LEU HD12 H N N 221 LEU HD13 H N N 222 LEU HD21 H N N 223 LEU HD22 H N N 224 LEU HD23 H N N 225 LEU HXT H N N 226 LYS N N N N 227 LYS CA C N S 228 LYS C C N N 229 LYS O O N N 230 LYS CB C N N 231 LYS CG C N N 232 LYS CD C N N 233 LYS CE C N N 234 LYS NZ N N N 235 LYS OXT O N N 236 LYS H H N N 237 LYS H2 H N N 238 LYS HA H N N 239 LYS HB2 H N N 240 LYS HB3 H N N 241 LYS HG2 H N N 242 LYS HG3 H N N 243 LYS HD2 H N N 244 LYS HD3 H N N 245 LYS HE2 H N N 246 LYS HE3 H N N 247 LYS HZ1 H N N 248 LYS HZ2 H N N 249 LYS HZ3 H N N 250 LYS HXT H N N 251 MET N N N N 252 MET CA C N S 253 MET C C N N 254 MET O O N N 255 MET CB C N N 256 MET CG C N N 257 MET SD S N N 258 MET CE C N N 259 MET OXT O N N 260 MET H H N N 261 MET H2 H N N 262 MET HA H N N 263 MET HB2 H N N 264 MET HB3 H N N 265 MET HG2 H N N 266 MET HG3 H N N 267 MET HE1 H N N 268 MET HE2 H N N 269 MET HE3 H N N 270 MET HXT H N N 271 PHE N N N N 272 PHE CA C N S 273 PHE C C N N 274 PHE O O N N 275 PHE CB C N N 276 PHE CG C Y N 277 PHE CD1 C Y N 278 PHE CD2 C Y N 279 PHE CE1 C Y N 280 PHE CE2 C Y N 281 PHE CZ C Y N 282 PHE OXT O N N 283 PHE H H N N 284 PHE H2 H N N 285 PHE HA H N N 286 PHE HB2 H N N 287 PHE HB3 H N N 288 PHE HD1 H N N 289 PHE HD2 H N N 290 PHE HE1 H N N 291 PHE HE2 H N N 292 PHE HZ H N N 293 PHE HXT H N N 294 PRO N N N N 295 PRO CA C N S 296 PRO C C N N 297 PRO O O N N 298 PRO CB C N N 299 PRO CG C N N 300 PRO CD C N N 301 PRO OXT O N N 302 PRO H H N N 303 PRO HA H N N 304 PRO HB2 H N N 305 PRO HB3 H N N 306 PRO HG2 H N N 307 PRO HG3 H N N 308 PRO HD2 H N N 309 PRO HD3 H N N 310 PRO HXT H N N 311 SER N N N N 312 SER CA C N S 313 SER C C N N 314 SER O O N N 315 SER CB C N N 316 SER OG O N N 317 SER OXT O N N 318 SER H H N N 319 SER H2 H N N 320 SER HA H N N 321 SER HB2 H N N 322 SER HB3 H N N 323 SER HG H N N 324 SER HXT H N N 325 THR N N N N 326 THR CA C N S 327 THR C C N N 328 THR O O N N 329 THR CB C N R 330 THR OG1 O N N 331 THR CG2 C N N 332 THR OXT O N N 333 THR H H N N 334 THR H2 H N N 335 THR HA H N N 336 THR HB H N N 337 THR HG1 H N N 338 THR HG21 H N N 339 THR HG22 H N N 340 THR HG23 H N N 341 THR HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9EE NAJ CAF sing N N 1 9EE CAF OAI doub N N 2 9EE CAF CAE sing N N 3 9EE CAD CAE sing N N 4 9EE CAD CAC sing N N 5 9EE CAA CAC sing N N 6 9EE CAA CAB sing N N 7 9EE CAB NAG sing N N 8 9EE CAB OAH doub N N 9 9EE NAG H1 sing N N 10 9EE NAG H2 sing N N 11 9EE CAA H3 sing N N 12 9EE CAA H4 sing N N 13 9EE CAC H5 sing N N 14 9EE CAC H6 sing N N 15 9EE CAD H7 sing N N 16 9EE CAD H8 sing N N 17 9EE CAE H9 sing N N 18 9EE CAE H10 sing N N 19 9EE NAJ H11 sing N N 20 9EE NAJ H12 sing N N 21 ALA N CA sing N N 22 ALA N H sing N N 23 ALA N H2 sing N N 24 ALA CA C sing N N 25 ALA CA CB sing N N 26 ALA CA HA sing N N 27 ALA C O doub N N 28 ALA C OXT sing N N 29 ALA CB HB1 sing N N 30 ALA CB HB2 sing N N 31 ALA CB HB3 sing N N 32 ALA OXT HXT sing N N 33 ARG N CA sing N N 34 ARG N H sing N N 35 ARG N H2 sing N N 36 ARG CA C sing N N 37 ARG CA CB sing N N 38 ARG CA HA sing N N 39 ARG C O doub N N 40 ARG C OXT sing N N 41 ARG CB CG sing N N 42 ARG CB HB2 sing N N 43 ARG CB HB3 sing N N 44 ARG CG CD sing N N 45 ARG CG HG2 sing N N 46 ARG CG HG3 sing N N 47 ARG CD NE sing N N 48 ARG CD HD2 sing N N 49 ARG CD HD3 sing N N 50 ARG NE CZ sing N N 51 ARG NE HE sing N N 52 ARG CZ NH1 sing N N 53 ARG CZ NH2 doub N N 54 ARG NH1 HH11 sing N N 55 ARG NH1 HH12 sing N N 56 ARG NH2 HH21 sing N N 57 ARG NH2 HH22 sing N N 58 ARG OXT HXT sing N N 59 ASN N CA sing N N 60 ASN N H sing N N 61 ASN N H2 sing N N 62 ASN CA C sing N N 63 ASN CA CB sing N N 64 ASN CA HA sing N N 65 ASN C O doub N N 66 ASN C OXT sing N N 67 ASN CB CG sing N N 68 ASN CB HB2 sing N N 69 ASN CB HB3 sing N N 70 ASN CG OD1 doub N N 71 ASN CG ND2 sing N N 72 ASN ND2 HD21 sing N N 73 ASN ND2 HD22 sing N N 74 ASN OXT HXT sing N N 75 ASP N CA sing N N 76 ASP N H sing N N 77 ASP N H2 sing N N 78 ASP CA C sing N N 79 ASP CA CB sing N N 80 ASP CA HA sing N N 81 ASP C O doub N N 82 ASP C OXT sing N N 83 ASP CB CG sing N N 84 ASP CB HB2 sing N N 85 ASP CB HB3 sing N N 86 ASP CG OD1 doub N N 87 ASP CG OD2 sing N N 88 ASP OD2 HD2 sing N N 89 ASP OXT HXT sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 HOH O H1 sing N N 171 HOH O H2 sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 PHE N CA sing N N 258 PHE N H sing N N 259 PHE N H2 sing N N 260 PHE CA C sing N N 261 PHE CA CB sing N N 262 PHE CA HA sing N N 263 PHE C O doub N N 264 PHE C OXT sing N N 265 PHE CB CG sing N N 266 PHE CB HB2 sing N N 267 PHE CB HB3 sing N N 268 PHE CG CD1 doub Y N 269 PHE CG CD2 sing Y N 270 PHE CD1 CE1 sing Y N 271 PHE CD1 HD1 sing N N 272 PHE CD2 CE2 doub Y N 273 PHE CD2 HD2 sing N N 274 PHE CE1 CZ doub Y N 275 PHE CE1 HE1 sing N N 276 PHE CE2 CZ sing Y N 277 PHE CE2 HE2 sing N N 278 PHE CZ HZ sing N N 279 PHE OXT HXT sing N N 280 PRO N CA sing N N 281 PRO N CD sing N N 282 PRO N H sing N N 283 PRO CA C sing N N 284 PRO CA CB sing N N 285 PRO CA HA sing N N 286 PRO C O doub N N 287 PRO C OXT sing N N 288 PRO CB CG sing N N 289 PRO CB HB2 sing N N 290 PRO CB HB3 sing N N 291 PRO CG CD sing N N 292 PRO CG HG2 sing N N 293 PRO CG HG3 sing N N 294 PRO CD HD2 sing N N 295 PRO CD HD3 sing N N 296 PRO OXT HXT sing N N 297 SER N CA sing N N 298 SER N H sing N N 299 SER N H2 sing N N 300 SER CA C sing N N 301 SER CA CB sing N N 302 SER CA HA sing N N 303 SER C O doub N N 304 SER C OXT sing N N 305 SER CB OG sing N N 306 SER CB HB2 sing N N 307 SER CB HB3 sing N N 308 SER OG HG sing N N 309 SER OXT HXT sing N N 310 THR N CA sing N N 311 THR N H sing N N 312 THR N H2 sing N N 313 THR CA C sing N N 314 THR CA CB sing N N 315 THR CA HA sing N N 316 THR C O doub N N 317 THR C OXT sing N N 318 THR CB OG1 sing N N 319 THR CB CG2 sing N N 320 THR CB HB sing N N 321 THR OG1 HG1 sing N N 322 THR CG2 HG21 sing N N 323 THR CG2 HG22 sing N N 324 THR CG2 HG23 sing N N 325 THR OXT HXT sing N N 326 TRP N CA sing N N 327 TRP N H sing N N 328 TRP N H2 sing N N 329 TRP CA C sing N N 330 TRP CA CB sing N N 331 TRP CA HA sing N N 332 TRP C O doub N N 333 TRP C OXT sing N N 334 TRP CB CG sing N N 335 TRP CB HB2 sing N N 336 TRP CB HB3 sing N N 337 TRP CG CD1 doub Y N 338 TRP CG CD2 sing Y N 339 TRP CD1 NE1 sing Y N 340 TRP CD1 HD1 sing N N 341 TRP CD2 CE2 doub Y N 342 TRP CD2 CE3 sing Y N 343 TRP NE1 CE2 sing Y N 344 TRP NE1 HE1 sing N N 345 TRP CE2 CZ2 sing Y N 346 TRP CE3 CZ3 doub Y N 347 TRP CE3 HE3 sing N N 348 TRP CZ2 CH2 doub Y N 349 TRP CZ2 HZ2 sing N N 350 TRP CZ3 CH2 sing Y N 351 TRP CZ3 HZ3 sing N N 352 TRP CH2 HH2 sing N N 353 TRP OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # _pdbx_audit_support.funding_organization 'National Research Foundation' _pdbx_audit_support.country 'South Africa' _pdbx_audit_support.grant_number 91532 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3HKX _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5NYB _atom_sites.fract_transf_matrix[1][1] 0.013114 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008713 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015422 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_