HEADER VIRAL PROTEIN 16-MAY-17 5O03 TITLE GII.10 VIETNAM 026 PROTRUDING DOMAIN IN COMPLEX WITH NANOBODY NANO-32 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOBODY (VHH) NANO-32; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NORWALK VIRUS; SOURCE 3 ORGANISM_TAXID: 11983; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: WK6; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PHEN6C; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PMBP KEYWDS NOROVIRUS, PROTRUDING DOMAIN, CAPSID, VHH, NANOBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.D.KOROMYSLOVA,G.H.HANSMAN REVDAT 5 10-APR-19 5O03 1 SOURCE REVDAT 4 20-FEB-19 5O03 1 REMARK LINK REVDAT 3 12-SEP-18 5O03 1 SOURCE REVDAT 2 15-NOV-17 5O03 1 JRNL REVDAT 1 04-OCT-17 5O03 0 JRNL AUTH A.D.KOROMYSLOVA,G.S.HANSMAN JRNL TITL NANOBODIES TARGETING NOROVIRUS CAPSID REVEAL FUNCTIONAL JRNL TITL 2 EPITOPES AND POTENTIAL MECHANISMS OF NEUTRALIZATION. JRNL REF PLOS PATHOG. V. 13 06636 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 29095961 JRNL DOI 10.1371/JOURNAL.PPAT.1006636 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 84222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0537 - 6.8122 0.99 2949 154 0.1748 0.1702 REMARK 3 2 6.8122 - 5.4092 1.00 2798 148 0.1586 0.1612 REMARK 3 3 5.4092 - 4.7261 1.00 2747 145 0.1386 0.1557 REMARK 3 4 4.7261 - 4.2943 1.00 2729 144 0.1196 0.1339 REMARK 3 5 4.2943 - 3.9866 1.00 2695 142 0.1389 0.1570 REMARK 3 6 3.9866 - 3.7517 1.00 2724 143 0.1633 0.1858 REMARK 3 7 3.7517 - 3.5638 1.00 2671 141 0.1693 0.2206 REMARK 3 8 3.5638 - 3.4087 1.00 2683 142 0.1836 0.1783 REMARK 3 9 3.4087 - 3.2775 1.00 2683 141 0.1848 0.2322 REMARK 3 10 3.2775 - 3.1645 1.00 2661 140 0.1948 0.1873 REMARK 3 11 3.1645 - 3.0655 1.00 2674 141 0.1859 0.2405 REMARK 3 12 3.0655 - 2.9779 1.00 2667 140 0.1883 0.2027 REMARK 3 13 2.9779 - 2.8995 1.00 2664 141 0.1860 0.2234 REMARK 3 14 2.8995 - 2.8288 1.00 2651 138 0.1891 0.1899 REMARK 3 15 2.8288 - 2.7645 1.00 2657 140 0.1903 0.2282 REMARK 3 16 2.7645 - 2.7057 1.00 2656 140 0.1796 0.2099 REMARK 3 17 2.7057 - 2.6516 1.00 2662 139 0.1951 0.2577 REMARK 3 18 2.6516 - 2.6015 1.00 2615 138 0.1962 0.2290 REMARK 3 19 2.6015 - 2.5551 1.00 2637 138 0.1975 0.2357 REMARK 3 20 2.5551 - 2.5117 1.00 2653 140 0.2039 0.2634 REMARK 3 21 2.5117 - 2.4712 1.00 2641 139 0.2067 0.2582 REMARK 3 22 2.4712 - 2.4332 1.00 2633 139 0.1975 0.2347 REMARK 3 23 2.4332 - 2.3974 1.00 2640 140 0.2015 0.2235 REMARK 3 24 2.3974 - 2.3637 1.00 2641 139 0.2096 0.2546 REMARK 3 25 2.3637 - 2.3317 1.00 2591 137 0.2150 0.2984 REMARK 3 26 2.3317 - 2.3014 1.00 2678 141 0.2292 0.2829 REMARK 3 27 2.3014 - 2.2727 1.00 2605 137 0.2363 0.2485 REMARK 3 28 2.2727 - 2.2453 1.00 2602 136 0.2295 0.2275 REMARK 3 29 2.2453 - 2.2192 1.00 2651 140 0.2326 0.2777 REMARK 3 30 2.2192 - 2.1942 0.94 2452 129 0.2599 0.2849 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6955 REMARK 3 ANGLE : 0.873 9487 REMARK 3 CHIRALITY : 0.035 1052 REMARK 3 PLANARITY : 0.004 1248 REMARK 3 DIHEDRAL : 12.292 2433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6664 39.9474 -37.6771 REMARK 3 T TENSOR REMARK 3 T11: 0.2693 T22: 0.5129 REMARK 3 T33: 0.3119 T12: 0.0231 REMARK 3 T13: -0.0551 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 3.0885 L22: 3.3865 REMARK 3 L33: 3.7018 L12: 0.0215 REMARK 3 L13: -0.7331 L23: -1.2849 REMARK 3 S TENSOR REMARK 3 S11: -0.0041 S12: 0.3891 S13: -0.2794 REMARK 3 S21: -0.1384 S22: -0.0522 S23: -0.0188 REMARK 3 S31: -0.0639 S32: -0.1494 S33: 0.0805 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3425 32.1183 -22.2796 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.4424 REMARK 3 T33: 0.3120 T12: -0.0475 REMARK 3 T13: -0.0083 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 6.6055 L22: 4.2135 REMARK 3 L33: 8.5477 L12: -4.5222 REMARK 3 L13: 4.9007 L23: -5.2533 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: -0.2832 S13: 0.0085 REMARK 3 S21: -0.0094 S22: 0.0672 S23: 0.0669 REMARK 3 S31: 0.1094 S32: -0.4231 S33: -0.0103 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6012 24.0618 -20.3488 REMARK 3 T TENSOR REMARK 3 T11: 0.3371 T22: 0.5473 REMARK 3 T33: 0.4577 T12: -0.0962 REMARK 3 T13: -0.0446 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 2.8708 L22: 0.6060 REMARK 3 L33: 3.0831 L12: -0.6188 REMARK 3 L13: 1.0260 L23: -1.2695 REMARK 3 S TENSOR REMARK 3 S11: 0.0855 S12: -0.0335 S13: -0.1392 REMARK 3 S21: 0.1166 S22: -0.1562 S23: -0.0027 REMARK 3 S31: 0.1179 S32: -0.1520 S33: 0.1027 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 333 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9690 23.2896 -19.7518 REMARK 3 T TENSOR REMARK 3 T11: 0.2552 T22: 0.4770 REMARK 3 T33: 0.4443 T12: 0.0462 REMARK 3 T13: -0.0667 T23: 0.0618 REMARK 3 L TENSOR REMARK 3 L11: 4.2234 L22: 3.2811 REMARK 3 L33: 2.8776 L12: 1.6615 REMARK 3 L13: 1.2322 L23: 0.7577 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: -0.1922 S13: -0.3085 REMARK 3 S21: 0.2223 S22: -0.1790 S23: -0.3285 REMARK 3 S31: 0.2162 S32: 0.4682 S33: 0.1268 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 371 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2523 25.4247 -32.2303 REMARK 3 T TENSOR REMARK 3 T11: 0.2472 T22: 0.4707 REMARK 3 T33: 0.3971 T12: -0.0116 REMARK 3 T13: -0.0392 T23: -0.0888 REMARK 3 L TENSOR REMARK 3 L11: 2.0827 L22: 1.3651 REMARK 3 L33: 2.9816 L12: 0.2011 REMARK 3 L13: 0.0314 L23: -0.4088 REMARK 3 S TENSOR REMARK 3 S11: 0.0682 S12: 0.1905 S13: -0.3537 REMARK 3 S21: 0.0092 S22: -0.0980 S23: -0.0159 REMARK 3 S31: 0.3097 S32: -0.1802 S33: -0.0229 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4274 46.7100 -40.8326 REMARK 3 T TENSOR REMARK 3 T11: 0.3213 T22: 0.6099 REMARK 3 T33: 0.3435 T12: 0.0676 REMARK 3 T13: -0.0233 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 3.9255 L22: 2.1915 REMARK 3 L33: 3.8352 L12: -0.7037 REMARK 3 L13: 0.5627 L23: -0.0691 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: 0.4477 S13: 0.1788 REMARK 3 S21: -0.1376 S22: -0.1188 S23: 0.0210 REMARK 3 S31: -0.4314 S32: -0.3117 S33: 0.0986 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 521 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9379 51.0952 -45.4968 REMARK 3 T TENSOR REMARK 3 T11: 0.5866 T22: 0.7556 REMARK 3 T33: 0.3932 T12: 0.1916 REMARK 3 T13: 0.0031 T23: 0.1211 REMARK 3 L TENSOR REMARK 3 L11: 8.0539 L22: 4.1028 REMARK 3 L33: 8.4148 L12: 0.1032 REMARK 3 L13: 4.2658 L23: 3.2159 REMARK 3 S TENSOR REMARK 3 S11: -0.4157 S12: 0.3293 S13: 0.6655 REMARK 3 S21: -0.4434 S22: -0.1221 S23: 0.4423 REMARK 3 S31: -0.8263 S32: -1.1278 S33: 0.5613 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 224 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4370 50.0644 -16.7274 REMARK 3 T TENSOR REMARK 3 T11: 0.5476 T22: 0.5227 REMARK 3 T33: 0.3719 T12: -0.1822 REMARK 3 T13: -0.0883 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 3.1232 L22: 1.4785 REMARK 3 L33: 2.5015 L12: 0.2105 REMARK 3 L13: -0.6343 L23: 0.3817 REMARK 3 S TENSOR REMARK 3 S11: 0.1005 S12: -0.3918 S13: 0.2516 REMARK 3 S21: 0.3702 S22: -0.2159 S23: -0.3264 REMARK 3 S31: -0.7325 S32: 0.5498 S33: 0.0705 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5360 46.0029 -31.9383 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.6699 REMARK 3 T33: 0.4038 T12: -0.1297 REMARK 3 T13: -0.0910 T23: 0.1260 REMARK 3 L TENSOR REMARK 3 L11: 5.9972 L22: 2.6046 REMARK 3 L33: 2.8451 L12: -3.7622 REMARK 3 L13: -2.4159 L23: 0.7210 REMARK 3 S TENSOR REMARK 3 S11: 0.0451 S12: 0.3595 S13: -0.1775 REMARK 3 S21: 0.2455 S22: -0.3311 S23: -0.2862 REMARK 3 S31: -0.5516 S32: 0.6066 S33: 0.0003 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 295 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6243 42.6854 -33.7181 REMARK 3 T TENSOR REMARK 3 T11: 0.4161 T22: 1.0019 REMARK 3 T33: 0.5516 T12: -0.1793 REMARK 3 T13: -0.0818 T23: 0.1371 REMARK 3 L TENSOR REMARK 3 L11: 1.0259 L22: 0.9796 REMARK 3 L33: 2.3349 L12: -0.1566 REMARK 3 L13: -0.8061 L23: 1.3933 REMARK 3 S TENSOR REMARK 3 S11: -0.0020 S12: 0.2645 S13: 0.0900 REMARK 3 S21: -0.1752 S22: -0.1233 S23: -0.1687 REMARK 3 S31: -0.3146 S32: 0.9876 S33: 0.1433 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 333 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9209 31.8363 -35.1906 REMARK 3 T TENSOR REMARK 3 T11: 0.2580 T22: 0.8372 REMARK 3 T33: 0.4965 T12: 0.0287 REMARK 3 T13: 0.0081 T23: 0.0587 REMARK 3 L TENSOR REMARK 3 L11: 7.1341 L22: 4.1406 REMARK 3 L33: 1.6561 L12: 2.8146 REMARK 3 L13: 2.5466 L23: 0.7176 REMARK 3 S TENSOR REMARK 3 S11: -0.1612 S12: 0.5156 S13: -0.4648 REMARK 3 S21: -0.2796 S22: -0.0365 S23: -0.4649 REMARK 3 S31: -0.2159 S32: 1.1055 S33: 0.0680 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 371 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7136 34.0554 -28.5535 REMARK 3 T TENSOR REMARK 3 T11: 0.2997 T22: 0.9745 REMARK 3 T33: 0.5875 T12: -0.0428 REMARK 3 T13: -0.1030 T23: 0.0969 REMARK 3 L TENSOR REMARK 3 L11: 0.8978 L22: 2.1462 REMARK 3 L33: 1.8017 L12: 1.0821 REMARK 3 L13: -0.3296 L23: 0.0983 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: 0.0150 S13: -0.1299 REMARK 3 S21: 0.1798 S22: -0.1115 S23: -0.5397 REMARK 3 S31: 0.0735 S32: 0.9045 S33: 0.0875 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 410 THROUGH 429 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8912 52.3141 -24.2827 REMARK 3 T TENSOR REMARK 3 T11: 0.6119 T22: 1.0405 REMARK 3 T33: 0.6658 T12: -0.4780 REMARK 3 T13: -0.1715 T23: 0.1123 REMARK 3 L TENSOR REMARK 3 L11: 5.5686 L22: 2.5799 REMARK 3 L33: 0.4941 L12: 0.3269 REMARK 3 L13: 0.1152 L23: -1.1070 REMARK 3 S TENSOR REMARK 3 S11: 0.1214 S12: 0.2978 S13: 0.4517 REMARK 3 S21: 0.3373 S22: -0.2077 S23: -0.7970 REMARK 3 S31: -0.9696 S32: 0.8656 S33: -0.0690 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 430 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1962 47.0815 -10.4341 REMARK 3 T TENSOR REMARK 3 T11: 0.6422 T22: 0.7163 REMARK 3 T33: 0.4279 T12: -0.2559 REMARK 3 T13: -0.1739 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 2.7959 L22: 0.1010 REMARK 3 L33: 2.9089 L12: -0.2320 REMARK 3 L13: -0.5015 L23: 0.5290 REMARK 3 S TENSOR REMARK 3 S11: -0.0473 S12: -0.4311 S13: 0.1465 REMARK 3 S21: 0.6350 S22: -0.0891 S23: -0.1146 REMARK 3 S31: -0.6448 S32: 0.7608 S33: 0.0032 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 456 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4252 56.0566 -15.7995 REMARK 3 T TENSOR REMARK 3 T11: 0.6227 T22: 0.4471 REMARK 3 T33: 0.3812 T12: -0.1294 REMARK 3 T13: -0.0614 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.9684 L22: 5.3110 REMARK 3 L33: 4.8867 L12: -0.3469 REMARK 3 L13: -0.7626 L23: -0.1879 REMARK 3 S TENSOR REMARK 3 S11: 0.1332 S12: -0.0147 S13: 0.2416 REMARK 3 S21: 0.2310 S22: -0.1147 S23: 0.1844 REMARK 3 S31: -1.1809 S32: 0.1273 S33: 0.0307 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 501 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0334 52.9163 -7.5281 REMARK 3 T TENSOR REMARK 3 T11: 0.6925 T22: 0.5152 REMARK 3 T33: 0.3770 T12: -0.1544 REMARK 3 T13: -0.1617 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 5.0118 L22: 3.1617 REMARK 3 L33: 4.7629 L12: 1.0461 REMARK 3 L13: -0.1401 L23: 0.9652 REMARK 3 S TENSOR REMARK 3 S11: -0.0140 S12: -0.0105 S13: 0.4404 REMARK 3 S21: 0.8369 S22: -0.0559 S23: -0.0791 REMARK 3 S31: -0.7798 S32: 0.5979 S33: 0.1530 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 521 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4478 62.8512 -8.7962 REMARK 3 T TENSOR REMARK 3 T11: 0.9985 T22: 0.6101 REMARK 3 T33: 0.4596 T12: -0.1308 REMARK 3 T13: 0.0538 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 3.5557 L22: 7.2692 REMARK 3 L33: 7.0042 L12: 2.5697 REMARK 3 L13: 4.9371 L23: 2.7835 REMARK 3 S TENSOR REMARK 3 S11: -0.1125 S12: -0.3700 S13: 0.5342 REMARK 3 S21: 0.0222 S22: -0.1227 S23: 0.1390 REMARK 3 S31: -1.7373 S32: 0.2847 S33: 0.3347 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7346 43.7682 -56.1103 REMARK 3 T TENSOR REMARK 3 T11: 0.4532 T22: 1.0364 REMARK 3 T33: 0.5476 T12: 0.0432 REMARK 3 T13: 0.0642 T23: 0.1186 REMARK 3 L TENSOR REMARK 3 L11: 2.7189 L22: 4.4635 REMARK 3 L33: 2.0907 L12: -0.4078 REMARK 3 L13: 0.7909 L23: -0.3470 REMARK 3 S TENSOR REMARK 3 S11: 0.2434 S12: 0.4667 S13: -0.5770 REMARK 3 S21: -0.4053 S22: -0.1762 S23: -0.7401 REMARK 3 S31: 0.1059 S32: 0.1686 S33: 0.0247 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 52 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2623 47.0695 -61.6216 REMARK 3 T TENSOR REMARK 3 T11: 0.5191 T22: 1.0660 REMARK 3 T33: 0.5759 T12: -0.0139 REMARK 3 T13: 0.1140 T23: 0.1489 REMARK 3 L TENSOR REMARK 3 L11: 7.1316 L22: 3.5863 REMARK 3 L33: 4.0396 L12: -1.7208 REMARK 3 L13: -1.7898 L23: 0.0771 REMARK 3 S TENSOR REMARK 3 S11: 0.2259 S12: 1.1669 S13: 0.1906 REMARK 3 S21: -0.5808 S22: -0.2229 S23: -0.5817 REMARK 3 S31: -0.2898 S32: 0.6704 S33: -0.0045 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 100 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7804 54.0648 -59.4972 REMARK 3 T TENSOR REMARK 3 T11: 0.9446 T22: 1.1131 REMARK 3 T33: 0.7205 T12: 0.1738 REMARK 3 T13: 0.0178 T23: 0.1553 REMARK 3 L TENSOR REMARK 3 L11: 4.1780 L22: 9.7119 REMARK 3 L33: 8.4885 L12: 2.7517 REMARK 3 L13: -5.4979 L23: -6.1852 REMARK 3 S TENSOR REMARK 3 S11: 0.4938 S12: 1.5381 S13: 1.8091 REMARK 3 S21: -0.9574 S22: 0.2905 S23: 1.5435 REMARK 3 S31: -0.8620 S32: -1.3341 S33: -0.7262 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 113 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7925 48.5631 -50.4399 REMARK 3 T TENSOR REMARK 3 T11: 0.4012 T22: 0.9052 REMARK 3 T33: 0.5277 T12: -0.0161 REMARK 3 T13: -0.0367 T23: 0.1371 REMARK 3 L TENSOR REMARK 3 L11: 7.4114 L22: 3.9788 REMARK 3 L33: 2.4161 L12: 1.3629 REMARK 3 L13: -1.6803 L23: 0.9733 REMARK 3 S TENSOR REMARK 3 S11: 0.1400 S12: 0.0051 S13: -0.1697 REMARK 3 S21: 0.1847 S22: -0.2431 S23: -0.5343 REMARK 3 S31: -0.3392 S32: 0.4724 S33: 0.1115 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2815 21.5795 1.0877 REMARK 3 T TENSOR REMARK 3 T11: 0.7088 T22: 0.6361 REMARK 3 T33: 0.8234 T12: -0.0980 REMARK 3 T13: -0.2181 T23: 0.1905 REMARK 3 L TENSOR REMARK 3 L11: 3.6099 L22: 8.4144 REMARK 3 L33: 7.5398 L12: 5.1905 REMARK 3 L13: -0.7247 L23: 0.4923 REMARK 3 S TENSOR REMARK 3 S11: 0.4629 S12: -0.5482 S13: -1.2959 REMARK 3 S21: -0.0570 S22: -0.3251 S23: -0.7903 REMARK 3 S31: 0.6181 S32: -0.1537 S33: 0.1266 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 18 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3674 29.8525 5.5808 REMARK 3 T TENSOR REMARK 3 T11: 0.7106 T22: 0.5996 REMARK 3 T33: 0.4493 T12: -0.2588 REMARK 3 T13: -0.1037 T23: 0.0829 REMARK 3 L TENSOR REMARK 3 L11: 4.4317 L22: 6.7253 REMARK 3 L33: 6.4070 L12: 2.0533 REMARK 3 L13: 0.4410 L23: -0.4676 REMARK 3 S TENSOR REMARK 3 S11: 0.6798 S12: -0.8624 S13: -0.6299 REMARK 3 S21: 0.7799 S22: -0.4911 S23: -0.2507 REMARK 3 S31: 0.2676 S32: -0.3862 S33: -0.1638 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 84 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1135 22.7577 1.3543 REMARK 3 T TENSOR REMARK 3 T11: 0.9288 T22: 0.7429 REMARK 3 T33: 0.6324 T12: -0.3514 REMARK 3 T13: -0.2504 T23: 0.1152 REMARK 3 L TENSOR REMARK 3 L11: 2.6130 L22: 6.2730 REMARK 3 L33: 4.9598 L12: 0.9462 REMARK 3 L13: -1.0988 L23: -3.4638 REMARK 3 S TENSOR REMARK 3 S11: 0.6168 S12: -0.6663 S13: -0.5814 REMARK 3 S21: 0.5360 S22: -0.2747 S23: 0.1437 REMARK 3 S31: 1.0563 S32: -0.3884 S33: -0.2370 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 100 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3122 33.1725 -1.2823 REMARK 3 T TENSOR REMARK 3 T11: 0.6604 T22: 0.6225 REMARK 3 T33: 0.4118 T12: -0.1413 REMARK 3 T13: -0.1255 T23: -0.0684 REMARK 3 L TENSOR REMARK 3 L11: 7.4754 L22: 4.2621 REMARK 3 L33: 3.5259 L12: 4.0028 REMARK 3 L13: -1.4697 L23: -3.2904 REMARK 3 S TENSOR REMARK 3 S11: 0.4931 S12: -0.1183 S13: 0.3084 REMARK 3 S21: 0.3966 S22: -0.3287 S23: -0.0118 REMARK 3 S31: 0.0289 S32: -0.8612 S33: -0.1839 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2778 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C REMARK 3 SELECTION : CHAIN D REMARK 3 ATOM PAIRS NUMBER : 1074 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5O03 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200003691. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.965 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84293 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 49.041 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.64 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.49 REMARK 200 R MERGE FOR SHELL (I) : 0.77300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 134.16000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.83000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.83000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.08000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.83000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.83000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 201.24000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.83000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.83000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.08000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.83000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.83000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 201.24000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 134.16000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 347 REMARK 465 GLY A 348 REMARK 465 GLU A 349 REMARK 465 GLY A 350 REMARK 465 ASN A 351 REMARK 465 PRO B 347 REMARK 465 GLY B 348 REMARK 465 GLU B 349 REMARK 465 THR C 104 REMARK 465 THR C 105 REMARK 465 VAL C 106 REMARK 465 THR D 104 REMARK 465 THR D 105 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 224 OG REMARK 470 GLN A 295 CG CD OE1 NE2 REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 ARG A 299 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 344 CG OD1 ND2 REMARK 470 THR A 345 OG1 CG2 REMARK 470 VAL A 346 CG1 CG2 REMARK 470 GLN A 384 CG CD OE1 NE2 REMARK 470 LEU A 420 CG CD1 CD2 REMARK 470 ASN A 510 CG OD1 ND2 REMARK 470 GLN A 531 CG CD OE1 NE2 REMARK 470 SER B 224 OG REMARK 470 ARG B 299 CG CD NE CZ NH1 NH2 REMARK 470 THR B 345 OG1 CG2 REMARK 470 VAL B 346 CG1 CG2 REMARK 470 ASN B 351 CG OD1 ND2 REMARK 470 GLN B 384 CG CD OE1 NE2 REMARK 470 LEU B 420 CG CD1 CD2 REMARK 470 ASN B 510 CG OD1 ND2 REMARK 470 ARG B 524 CZ NH1 NH2 REMARK 470 GLN B 531 CG CD OE1 NE2 REMARK 470 GLN C 13 CG CD OE1 NE2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 LYS C 65 CG CD CE NZ REMARK 470 LYS C 76 CG CD CE NZ REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 GLN C 107 CG CD OE1 NE2 REMARK 470 ARG C 114 CG CD NE CZ NH1 NH2 REMARK 470 SER C 135 OG REMARK 470 GLN D 1 CG CD OE1 NE2 REMARK 470 LEU D 11 CG CD1 CD2 REMARK 470 GLN D 13 CG CD OE1 NE2 REMARK 470 LYS D 65 CG CD CE NZ REMARK 470 LYS D 76 CG CD CE NZ REMARK 470 VAL D 106 CG1 CG2 REMARK 470 GLN D 107 CG CD OE1 NE2 REMARK 470 ARG D 114 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS D 50 CB CYS D 110 1.92 REMARK 500 SG CYS C 50 CB CYS C 110 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 243 77.41 -66.64 REMARK 500 ASN A 252 76.22 -151.41 REMARK 500 GLN A 260 52.38 -145.92 REMARK 500 THR A 345 39.54 -83.61 REMARK 500 GLN A 384 -34.03 -137.72 REMARK 500 PRO B 243 78.50 -67.11 REMARK 500 ASN B 252 76.87 -150.70 REMARK 500 GLN B 260 52.81 -146.02 REMARK 500 THR B 345 42.69 -80.78 REMARK 500 GLN B 384 -34.04 -137.49 REMARK 500 ALA D 108 -50.59 -120.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide CYS C 50 and CYS C REMARK 800 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide CYS D 50 and CYS D REMARK 800 110 DBREF 5O03 A 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 DBREF 5O03 B 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 DBREF 5O03 C 1 135 PDB 5O03 5O03 1 135 DBREF 5O03 D 1 135 PDB 5O03 5O03 1 135 SEQRES 1 A 315 SER LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU SEQRES 2 A 315 LEU THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU SEQRES 3 A 315 TYR THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN SEQRES 4 A 315 ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR SEQRES 5 A 315 THR GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY SEQRES 6 A 315 LYS VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR SEQRES 7 A 315 HIS TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO SEQRES 8 A 315 PHE ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 A 315 PRO ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN SEQRES 10 A 315 ARG ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO SEQRES 11 A 315 ALA ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER SEQRES 12 A 315 PRO LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER SEQRES 13 A 315 THR TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR SEQRES 14 A 315 LYS PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SEQRES 15 A 315 SER HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY SEQRES 16 A 315 ALA LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA SEQRES 17 A 315 PRO VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER SEQRES 18 A 315 PHE ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE SEQRES 19 A 315 ASP CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR SEQRES 20 A 315 GLN GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL SEQRES 21 A 315 ARG TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU SEQRES 22 A 315 ALA LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG SEQRES 23 A 315 ASN SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR SEQRES 24 A 315 PHE ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU SEQRES 25 A 315 ALA PRO MET SEQRES 1 B 315 SER LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU SEQRES 2 B 315 LEU THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU SEQRES 3 B 315 TYR THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN SEQRES 4 B 315 ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR SEQRES 5 B 315 THR GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY SEQRES 6 B 315 LYS VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR SEQRES 7 B 315 HIS TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO SEQRES 8 B 315 PHE ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 B 315 PRO ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN SEQRES 10 B 315 ARG ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO SEQRES 11 B 315 ALA ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER SEQRES 12 B 315 PRO LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER SEQRES 13 B 315 THR TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR SEQRES 14 B 315 LYS PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SEQRES 15 B 315 SER HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY SEQRES 16 B 315 ALA LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA SEQRES 17 B 315 PRO VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER SEQRES 18 B 315 PHE ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE SEQRES 19 B 315 ASP CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR SEQRES 20 B 315 GLN GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL SEQRES 21 B 315 ARG TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU SEQRES 22 B 315 ALA LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG SEQRES 23 B 315 ASN SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR SEQRES 24 B 315 PHE ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU SEQRES 25 B 315 ALA PRO MET SEQRES 1 C 135 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 135 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 135 PHE THR LEU GLY TYR TYR PRO ILE GLY TRP PHE ARG GLN SEQRES 4 C 135 ALA PRO GLY LYS GLY LEU GLU GLY VAL SER CYS ILE SER SEQRES 5 C 135 GLY SER GLY GLY SER ALA ASN TYR ALA ALA SER VAL LYS SEQRES 6 C 135 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 C 135 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 C 135 ALA ILE TYR TYR CYS ALA ALA ASP LEU SER SER LEU THR SEQRES 9 C 135 THR VAL GLN ALA MET CYS VAL ILE PRO ARG PRO GLY PHE SEQRES 10 C 135 SER ALA LYS ALA TYR ASP TYR TRP GLY LEU GLY THR GLN SEQRES 11 C 135 VAL THR VAL SER SER SEQRES 1 D 135 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 135 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 135 PHE THR LEU GLY TYR TYR PRO ILE GLY TRP PHE ARG GLN SEQRES 4 D 135 ALA PRO GLY LYS GLY LEU GLU GLY VAL SER CYS ILE SER SEQRES 5 D 135 GLY SER GLY GLY SER ALA ASN TYR ALA ALA SER VAL LYS SEQRES 6 D 135 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 135 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 D 135 ALA ILE TYR TYR CYS ALA ALA ASP LEU SER SER LEU THR SEQRES 9 D 135 THR VAL GLN ALA MET CYS VAL ILE PRO ARG PRO GLY PHE SEQRES 10 D 135 SER ALA LYS ALA TYR ASP TYR TRP GLY LEU GLY THR GLN SEQRES 11 D 135 VAL THR VAL SER SER HET IMD A 601 5 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HET IMD B 601 5 HET EDO B 602 4 HET EDO B 603 4 HET EDO B 604 4 HET EDO B 605 4 HET EDO B 606 4 HET EDO B 607 4 HET EDO B 608 4 HETNAM IMD IMIDAZOLE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 IMD 2(C3 H5 N2 1+) FORMUL 6 EDO 15(C2 H6 O2) FORMUL 22 HOH *235(H2 O) HELIX 1 AA1 THR A 233 LEU A 237 5 5 HELIX 2 AA2 LEU A 279 ILE A 283 5 5 HELIX 3 AA3 THR A 370 LEU A 373 5 4 HELIX 4 AA4 ASP A 403 HIS A 407 5 5 HELIX 5 AA5 PRO A 462 SER A 473 1 12 HELIX 6 AA6 THR B 233 LEU B 237 5 5 HELIX 7 AA7 LEU B 279 ILE B 283 5 5 HELIX 8 AA8 THR B 370 LEU B 373 5 4 HELIX 9 AA9 ASP B 403 HIS B 407 5 5 HELIX 10 AB1 PRO B 462 SER B 473 1 12 HELIX 11 AB2 ASN C 74 LYS C 76 5 3 HELIX 12 AB3 LYS C 87 THR C 91 5 5 HELIX 13 AB4 SER C 118 TYR C 122 5 5 HELIX 14 AB5 ASN D 74 LYS D 76 5 3 HELIX 15 AB6 LYS D 87 THR D 91 5 5 HELIX 16 AB7 SER D 118 TYR D 122 5 5 SHEET 1 AA1 4 ALA A 456 CYS A 459 0 SHEET 2 AA1 4 CYS A 438 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA1 4 VAL A 248 THR A 251 -1 N VAL A 248 O ARG A 443 SHEET 4 AA1 4 GLY A 513 PRO A 514 -1 O GLY A 513 N THR A 251 SHEET 1 AA2 6 ALA A 456 CYS A 459 0 SHEET 2 AA2 6 CYS A 438 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA2 6 PHE A 504 VAL A 507 -1 O VAL A 507 N CYS A 438 SHEET 4 AA2 6 THR A 493 HIS A 500 -1 N HIS A 500 O PHE A 504 SHEET 5 AA2 6 VAL A 480 VAL A 486 -1 N TYR A 485 O LEU A 494 SHEET 6 AA2 6 TYR A 522 VAL A 529 -1 O SER A 527 N LEU A 482 SHEET 1 AA3 8 GLY B 450 TYR B 452 0 SHEET 2 AA3 8 ALA A 354 ALA A 363 -1 N ASN A 355 O GLY B 451 SHEET 3 AA3 8 ASN A 375 THR A 380 -1 O SER A 379 N VAL A 361 SHEET 4 AA3 8 THR A 301 VAL A 307 -1 N TRP A 303 O PHE A 378 SHEET 5 AA3 8 PHE A 286 VAL A 294 -1 N THR A 291 O ASN A 304 SHEET 6 AA3 8 PRO A 391 LEU A 399 -1 O THR A 392 N GLY A 288 SHEET 7 AA3 8 GLN A 333 ARG A 341 -1 N TYR A 335 O GLY A 398 SHEET 8 AA3 8 ALA A 354 ALA A 363 -1 O ARG A 356 N GLN A 340 SHEET 1 AA4 8 GLY A 450 TYR A 452 0 SHEET 2 AA4 8 ALA B 354 ALA B 363 -1 O ASN B 355 N GLY A 451 SHEET 3 AA4 8 ASN B 375 THR B 380 -1 O SER B 379 N VAL B 361 SHEET 4 AA4 8 THR B 301 THR B 308 -1 N THR B 301 O THR B 380 SHEET 5 AA4 8 PHE B 286 VAL B 294 -1 N ARG B 287 O THR B 308 SHEET 6 AA4 8 PRO B 391 LEU B 399 -1 O THR B 392 N GLY B 288 SHEET 7 AA4 8 GLN B 333 ARG B 341 -1 N VAL B 337 O THR B 395 SHEET 8 AA4 8 ALA B 354 ALA B 363 -1 O ARG B 356 N GLN B 340 SHEET 1 AA5 4 ALA B 456 CYS B 459 0 SHEET 2 AA5 4 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA5 4 VAL B 248 THR B 251 -1 N TYR B 250 O PHE B 441 SHEET 4 AA5 4 GLY B 513 PRO B 514 -1 O GLY B 513 N THR B 251 SHEET 1 AA6 6 ALA B 456 CYS B 459 0 SHEET 2 AA6 6 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA6 6 PHE B 504 VAL B 507 -1 O VAL B 507 N CYS B 438 SHEET 4 AA6 6 THR B 493 HIS B 500 -1 N HIS B 500 O PHE B 504 SHEET 5 AA6 6 VAL B 480 VAL B 486 -1 N ALA B 481 O LEU B 499 SHEET 6 AA6 6 TYR B 522 VAL B 529 -1 O SER B 527 N LEU B 482 SHEET 1 AA7 4 LEU C 4 SER C 7 0 SHEET 2 AA7 4 LEU C 18 ALA C 24 -1 O ALA C 23 N GLN C 5 SHEET 3 AA7 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA7 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AA8 6 LEU C 11 VAL C 12 0 SHEET 2 AA8 6 THR C 129 VAL C 133 1 O THR C 132 N VAL C 12 SHEET 3 AA8 6 ALA C 92 ALA C 98 -1 N TYR C 94 O THR C 129 SHEET 4 AA8 6 ILE C 34 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AA8 6 GLU C 46 ILE C 51 -1 O SER C 49 N TRP C 36 SHEET 6 AA8 6 ALA C 58 TYR C 60 -1 O ASN C 59 N CYS C 50 SHEET 1 AA9 4 GLN D 3 SER D 7 0 SHEET 2 AA9 4 LEU D 18 SER D 25 -1 O ALA D 23 N GLN D 5 SHEET 3 AA9 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AA9 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLN D 82 SHEET 1 AB1 6 LEU D 11 VAL D 12 0 SHEET 2 AB1 6 THR D 129 VAL D 133 1 O THR D 132 N VAL D 12 SHEET 3 AB1 6 ALA D 92 ALA D 98 -1 N TYR D 94 O THR D 129 SHEET 4 AB1 6 ILE D 34 GLN D 39 -1 N PHE D 37 O TYR D 95 SHEET 5 AB1 6 LEU D 45 ILE D 51 -1 O SER D 49 N TRP D 36 SHEET 6 AB1 6 ALA D 58 TYR D 60 -1 O ASN D 59 N CYS D 50 SSBOND 1 CYS C 22 CYS C 96 1555 1555 2.05 SSBOND 2 CYS C 50 CYS C 110 1555 1555 2.05 SSBOND 3 CYS D 22 CYS D 96 1555 1555 2.04 SSBOND 4 CYS D 50 CYS D 110 1555 1555 2.05 SITE 1 AC1 4 TYR A 470 GLN A 471 SER A 473 ILE B 231 SITE 1 AC2 5 THR A 281 GLY A 282 LYS A 393 HOH A 745 SITE 2 AC2 5 HOH A 762 SITE 1 AC3 5 PHE A 445 ILE A 446 PRO A 447 ARG B 341 SITE 2 AC3 5 GLN C 1 SITE 1 AC4 5 LEU A 272 GLN A 273 GLY A 274 THR A 276 SITE 2 AC4 5 LEU A 325 SITE 1 AC5 6 PRO A 230 GLU A 464 HIS A 468 HOH A 776 SITE 2 AC5 6 GLN B 471 HOH B 712 SITE 1 AC6 2 GLN A 277 ASN A 311 SITE 1 AC7 3 GLU A 359 LYS A 449 HIS B 358 SITE 1 AC8 2 SER A 379 THR A 380 SITE 1 AC9 2 THR A 318 ASP A 320 SITE 1 AD1 4 ILE A 231 TYR B 470 GLN B 471 SER B 473 SITE 1 AD2 7 PRO A 245 THR B 281 GLY B 282 LEU B 310 SITE 2 AD2 7 LYS B 393 HOH B 710 HOH B 726 SITE 1 AD3 5 ARG B 299 GLY B 300 SER B 379 THR B 380 SITE 2 AD3 5 TRP B 381 SITE 1 AD4 5 GLN A 471 GLU B 464 HIS B 468 HOH B 712 SITE 2 AD4 5 HOH B 767 SITE 1 AD5 6 PRO B 317 GLU B 319 ASP B 320 LYS B 372 SITE 2 AD5 6 MET B 424 ASN B 425 SITE 1 AD6 1 GLU B 236 SITE 1 AD7 2 GLU B 359 LYS B 449 SITE 1 AD8 5 ASN B 309 LEU B 310 ASN B 311 LEU B 325 SITE 2 AD8 5 HOH B 738 SITE 1 AD9 9 ILE C 34 SER C 49 ILE C 51 SER C 52 SITE 2 AD9 9 ALA C 58 ASN C 59 ILE C 70 MET C 109 SITE 3 AD9 9 VAL C 111 SITE 1 AE1 10 ILE D 34 SER D 49 ILE D 51 SER D 52 SITE 2 AE1 10 ALA D 58 ASN D 59 ILE D 70 MET D 109 SITE 3 AE1 10 VAL D 111 ILE D 112 CRYST1 109.660 109.660 268.320 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009119 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009119 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003727 0.00000