data_5O1T # _entry.id 5O1T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5O1T pdb_00005o1t 10.2210/pdb5o1t/pdb WWPDB D_1200004990 ? ? BMRB 34140 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of the RNA binding domain of Nrd1' _pdbx_database_related.db_id 34140 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5O1T _pdbx_database_status.recvd_initial_deposition_date 2017-05-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Martinez-Lumbreras, S.' 1 ? 'Perez-Canadillas, J.M.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 10293 _citation.page_last 10305 _citation.title 'The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx685 _citation.pdbx_database_id_PubMed 28973465 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Franco-Echevarria, E.' 1 ? primary 'Gonzalez-Polo, N.' 2 ? primary 'Zorrilla, S.' 3 ? primary 'Martinez-Lumbreras, S.' 4 ? primary 'Santiveri, C.M.' 5 ? primary 'Campos-Olivas, R.' 6 ? primary 'Sanchez, M.' 7 ? primary 'Calvo, O.' 8 ? primary 'Gonzalez, B.' 9 ? primary 'Perez-Canadillas, J.M.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protein NRD1' _entity.formula_weight 20051.533 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SIGAPNTTFGTNNHHLYPDELNVSNNPHYRPKPVSYDSTLPPDHIKVYSRTLFIGGVPLNMKEWDLANVLKPFAEVQSVI LNNSRKHAFVKVYSRHEAENVLQNFNKDGALPLRTRWGVGFGPRDCCDYQHGYSIIPMHRLTDADKKWSVSAQWGGTSGQ PLVTGIVFEEPDIIVGEGV ; _entity_poly.pdbx_seq_one_letter_code_can ;SIGAPNTTFGTNNHHLYPDELNVSNNPHYRPKPVSYDSTLPPDHIKVYSRTLFIGGVPLNMKEWDLANVLKPFAEVQSVI LNNSRKHAFVKVYSRHEAENVLQNFNKDGALPLRTRWGVGFGPRDCCDYQHGYSIIPMHRLTDADKKWSVSAQWGGTSGQ PLVTGIVFEEPDIIVGEGV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ILE n 1 3 GLY n 1 4 ALA n 1 5 PRO n 1 6 ASN n 1 7 THR n 1 8 THR n 1 9 PHE n 1 10 GLY n 1 11 THR n 1 12 ASN n 1 13 ASN n 1 14 HIS n 1 15 HIS n 1 16 LEU n 1 17 TYR n 1 18 PRO n 1 19 ASP n 1 20 GLU n 1 21 LEU n 1 22 ASN n 1 23 VAL n 1 24 SER n 1 25 ASN n 1 26 ASN n 1 27 PRO n 1 28 HIS n 1 29 TYR n 1 30 ARG n 1 31 PRO n 1 32 LYS n 1 33 PRO n 1 34 VAL n 1 35 SER n 1 36 TYR n 1 37 ASP n 1 38 SER n 1 39 THR n 1 40 LEU n 1 41 PRO n 1 42 PRO n 1 43 ASP n 1 44 HIS n 1 45 ILE n 1 46 LYS n 1 47 VAL n 1 48 TYR n 1 49 SER n 1 50 ARG n 1 51 THR n 1 52 LEU n 1 53 PHE n 1 54 ILE n 1 55 GLY n 1 56 GLY n 1 57 VAL n 1 58 PRO n 1 59 LEU n 1 60 ASN n 1 61 MET n 1 62 LYS n 1 63 GLU n 1 64 TRP n 1 65 ASP n 1 66 LEU n 1 67 ALA n 1 68 ASN n 1 69 VAL n 1 70 LEU n 1 71 LYS n 1 72 PRO n 1 73 PHE n 1 74 ALA n 1 75 GLU n 1 76 VAL n 1 77 GLN n 1 78 SER n 1 79 VAL n 1 80 ILE n 1 81 LEU n 1 82 ASN n 1 83 ASN n 1 84 SER n 1 85 ARG n 1 86 LYS n 1 87 HIS n 1 88 ALA n 1 89 PHE n 1 90 VAL n 1 91 LYS n 1 92 VAL n 1 93 TYR n 1 94 SER n 1 95 ARG n 1 96 HIS n 1 97 GLU n 1 98 ALA n 1 99 GLU n 1 100 ASN n 1 101 VAL n 1 102 LEU n 1 103 GLN n 1 104 ASN n 1 105 PHE n 1 106 ASN n 1 107 LYS n 1 108 ASP n 1 109 GLY n 1 110 ALA n 1 111 LEU n 1 112 PRO n 1 113 LEU n 1 114 ARG n 1 115 THR n 1 116 ARG n 1 117 TRP n 1 118 GLY n 1 119 VAL n 1 120 GLY n 1 121 PHE n 1 122 GLY n 1 123 PRO n 1 124 ARG n 1 125 ASP n 1 126 CYS n 1 127 CYS n 1 128 ASP n 1 129 TYR n 1 130 GLN n 1 131 HIS n 1 132 GLY n 1 133 TYR n 1 134 SER n 1 135 ILE n 1 136 ILE n 1 137 PRO n 1 138 MET n 1 139 HIS n 1 140 ARG n 1 141 LEU n 1 142 THR n 1 143 ASP n 1 144 ALA n 1 145 ASP n 1 146 LYS n 1 147 LYS n 1 148 TRP n 1 149 SER n 1 150 VAL n 1 151 SER n 1 152 ALA n 1 153 GLN n 1 154 TRP n 1 155 GLY n 1 156 GLY n 1 157 THR n 1 158 SER n 1 159 GLY n 1 160 GLN n 1 161 PRO n 1 162 LEU n 1 163 VAL n 1 164 THR n 1 165 GLY n 1 166 ILE n 1 167 VAL n 1 168 PHE n 1 169 GLU n 1 170 GLU n 1 171 PRO n 1 172 ASP n 1 173 ILE n 1 174 ILE n 1 175 VAL n 1 176 GLY n 1 177 GLU n 1 178 GLY n 1 179 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 179 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NRD1, YNL251C, N0868' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NRD1_YEAST _struct_ref.pdbx_db_accession P53617 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SIGAPNTTFGTNNHHLYPDELNVSNNPHYRPKPVSYDSTLPPDHIKVYSRTLFIGGVPLNMKEWDLANVLKPFAEVQSVI LNNSRKHAFVKVYSRHEAENVLQNFNKDGALPLRTRWGVGFGPRDCCDYQHGYSIIPMHRLTDADKKWSVSAQWGGTSGQ PLVTGIVFEEPDIIVGEGV ; _struct_ref.pdbx_align_begin 290 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5O1T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 179 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53617 _struct_ref_seq.db_align_beg 290 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 468 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 290 _struct_ref_seq.pdbx_auth_seq_align_end 468 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC' 1 isotropic 3 1 1 '3D HNCA' 2 isotropic 4 1 1 '3D HNCO' 2 isotropic 5 1 1 '3D CBCA(CO)NH' 2 isotropic 6 1 1 '3D HCCH-TOCSY' 2 isotropic 7 1 2 '2D 1H-1H NOESY' 2 isotropic 13 1 1 '3D 1H-15N NOESY' 2 isotropic 14 1 3 '2D 1H-1H NOESY F1filtered' 2 isotropic 15 1 4 '2D 1H-1H NOESY F1filtered' 2 isotropic 16 1 5 '2D 1H-1H NOESY F1filtered' 2 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 59.1 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Nrd1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '600 uM [U-100% 13C; U-100% 15N] Nrd1, 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 90% H2O/10% D2O' '90% H2O/10% D2O' Nrd1_CN solution ? 2 '800 uM Nrd1, 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 90% H2O/10% D2O' '90% H2O/10% D2O' Nrd1_na solution ? 3 ;400 uM [U-100% 13C; U-100% 15N] expect for Phe and Leu residues Nrd1, 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 90% H2O/10% D2O ; '90% H2O/10% D2O' Nrd1_PheLeu solution '13C 15N sample uniformly unlabelled in Phe and Leu (12C/14N)' 4 ;400 uM [U-100% 13C; U-100% 15N] expect for Ile residues Nrd1, 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 90% H2O/10% D2O ; '90% H2O/10% D2O' Nrd1_Ile solution '13C 15N sample uniformly unlabelled in Ile (12C/14N)' 5 ;400 uM [U-100% 13C; U-100% 15N] expect for Arg residues Nrd1, 25 mM potassium phosphate, 25 mM sodium chloride, 1 mM DTT, 90% H2O/10% D2O ; '90% H2O/10% D2O' Nrd1_Arg solution '13C 15N sample uniformly unlabelled in Arg (12C/14N)' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 600 ? 2 AVANCE ? Bruker 800 ? # _pdbx_nmr_refine.entry_id 5O1T _pdbx_nmr_refine.method Minimization _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 5O1T _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5O1T _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 4 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 5 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5O1T _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5O1T _struct.title 'Solution structure of the RNA binding domain of Nrd1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5O1T _struct_keywords.text 'Nrd1, RRM, RNA-binding, transcription non-coding RNAs, RNA binding protein' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 7 ? THR A 11 ? THR A 296 THR A 300 5 ? 5 HELX_P HELX_P2 AA2 LYS A 62 ? LYS A 71 ? LYS A 351 LYS A 360 1 ? 10 HELX_P HELX_P3 AA3 ASN A 83 ? LYS A 86 ? ASN A 372 LYS A 375 5 ? 4 HELX_P HELX_P4 AA4 SER A 94 ? PHE A 105 ? SER A 383 PHE A 394 1 ? 12 HELX_P HELX_P5 AA5 PRO A 123 ? ASP A 125 ? PRO A 412 ASP A 414 5 ? 3 HELX_P HELX_P6 AA6 HIS A 139 ? LEU A 141 ? HIS A 428 LEU A 430 5 ? 3 HELX_P HELX_P7 AA7 THR A 142 ? ALA A 152 ? THR A 431 ALA A 441 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 35 ? TYR A 36 ? SER A 324 TYR A 325 AA1 2 ILE A 166 ? GLU A 169 ? ILE A 455 GLU A 458 AA1 3 HIS A 44 ? TYR A 48 ? HIS A 333 TYR A 337 AA1 4 TYR A 133 ? PRO A 137 ? TYR A 422 PRO A 426 AA1 5 CYS A 127 ? ASP A 128 ? CYS A 416 ASP A 417 AA2 1 VAL A 76 ? ASN A 82 ? VAL A 365 ASN A 371 AA2 2 HIS A 87 ? VAL A 92 ? HIS A 376 VAL A 381 AA2 3 THR A 51 ? GLY A 55 ? THR A 340 GLY A 344 AA2 4 ARG A 114 ? TRP A 117 ? ARG A 403 TRP A 406 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 35 ? N SER A 324 O VAL A 167 ? O VAL A 456 AA1 2 3 O PHE A 168 ? O PHE A 457 N TYR A 48 ? N TYR A 337 AA1 3 4 N VAL A 47 ? N VAL A 336 O SER A 134 ? O SER A 423 AA1 4 5 O TYR A 133 ? O TYR A 422 N ASP A 128 ? N ASP A 417 AA2 1 2 N ASN A 82 ? N ASN A 371 O HIS A 87 ? O HIS A 376 AA2 2 3 O ALA A 88 ? O ALA A 377 N ILE A 54 ? N ILE A 343 AA2 3 4 N PHE A 53 ? N PHE A 342 O ARG A 116 ? O ARG A 405 # _atom_sites.entry_id 5O1T _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 290 290 SER SER A . n A 1 2 ILE 2 291 291 ILE ILE A . n A 1 3 GLY 3 292 292 GLY GLY A . n A 1 4 ALA 4 293 293 ALA ALA A . n A 1 5 PRO 5 294 294 PRO PRO A . n A 1 6 ASN 6 295 295 ASN ASN A . n A 1 7 THR 7 296 296 THR THR A . n A 1 8 THR 8 297 297 THR THR A . n A 1 9 PHE 9 298 298 PHE PHE A . n A 1 10 GLY 10 299 299 GLY GLY A . n A 1 11 THR 11 300 300 THR THR A . n A 1 12 ASN 12 301 301 ASN ASN A . n A 1 13 ASN 13 302 302 ASN ASN A . n A 1 14 HIS 14 303 303 HIS HIS A . n A 1 15 HIS 15 304 304 HIS HIS A . n A 1 16 LEU 16 305 305 LEU LEU A . n A 1 17 TYR 17 306 306 TYR TYR A . n A 1 18 PRO 18 307 307 PRO PRO A . n A 1 19 ASP 19 308 308 ASP ASP A . n A 1 20 GLU 20 309 309 GLU GLU A . n A 1 21 LEU 21 310 310 LEU LEU A . n A 1 22 ASN 22 311 311 ASN ASN A . n A 1 23 VAL 23 312 312 VAL VAL A . n A 1 24 SER 24 313 313 SER SER A . n A 1 25 ASN 25 314 314 ASN ASN A . n A 1 26 ASN 26 315 315 ASN ASN A . n A 1 27 PRO 27 316 316 PRO PRO A . n A 1 28 HIS 28 317 317 HIS HIS A . n A 1 29 TYR 29 318 318 TYR TYR A . n A 1 30 ARG 30 319 319 ARG ARG A . n A 1 31 PRO 31 320 320 PRO PRO A . n A 1 32 LYS 32 321 321 LYS LYS A . n A 1 33 PRO 33 322 322 PRO PRO A . n A 1 34 VAL 34 323 323 VAL VAL A . n A 1 35 SER 35 324 324 SER SER A . n A 1 36 TYR 36 325 325 TYR TYR A . n A 1 37 ASP 37 326 326 ASP ASP A . n A 1 38 SER 38 327 327 SER SER A . n A 1 39 THR 39 328 328 THR THR A . n A 1 40 LEU 40 329 329 LEU LEU A . n A 1 41 PRO 41 330 330 PRO PRO A . n A 1 42 PRO 42 331 331 PRO PRO A . n A 1 43 ASP 43 332 332 ASP ASP A . n A 1 44 HIS 44 333 333 HIS HIS A . n A 1 45 ILE 45 334 334 ILE ILE A . n A 1 46 LYS 46 335 335 LYS LYS A . n A 1 47 VAL 47 336 336 VAL VAL A . n A 1 48 TYR 48 337 337 TYR TYR A . n A 1 49 SER 49 338 338 SER SER A . n A 1 50 ARG 50 339 339 ARG ARG A . n A 1 51 THR 51 340 340 THR THR A . n A 1 52 LEU 52 341 341 LEU LEU A . n A 1 53 PHE 53 342 342 PHE PHE A . n A 1 54 ILE 54 343 343 ILE ILE A . n A 1 55 GLY 55 344 344 GLY GLY A . n A 1 56 GLY 56 345 345 GLY GLY A . n A 1 57 VAL 57 346 346 VAL VAL A . n A 1 58 PRO 58 347 347 PRO PRO A . n A 1 59 LEU 59 348 348 LEU LEU A . n A 1 60 ASN 60 349 349 ASN ASN A . n A 1 61 MET 61 350 350 MET MET A . n A 1 62 LYS 62 351 351 LYS LYS A . n A 1 63 GLU 63 352 352 GLU GLU A . n A 1 64 TRP 64 353 353 TRP TRP A . n A 1 65 ASP 65 354 354 ASP ASP A . n A 1 66 LEU 66 355 355 LEU LEU A . n A 1 67 ALA 67 356 356 ALA ALA A . n A 1 68 ASN 68 357 357 ASN ASN A . n A 1 69 VAL 69 358 358 VAL VAL A . n A 1 70 LEU 70 359 359 LEU LEU A . n A 1 71 LYS 71 360 360 LYS LYS A . n A 1 72 PRO 72 361 361 PRO PRO A . n A 1 73 PHE 73 362 362 PHE PHE A . n A 1 74 ALA 74 363 363 ALA ALA A . n A 1 75 GLU 75 364 364 GLU GLU A . n A 1 76 VAL 76 365 365 VAL VAL A . n A 1 77 GLN 77 366 366 GLN GLN A . n A 1 78 SER 78 367 367 SER SER A . n A 1 79 VAL 79 368 368 VAL VAL A . n A 1 80 ILE 80 369 369 ILE ILE A . n A 1 81 LEU 81 370 370 LEU LEU A . n A 1 82 ASN 82 371 371 ASN ASN A . n A 1 83 ASN 83 372 372 ASN ASN A . n A 1 84 SER 84 373 373 SER SER A . n A 1 85 ARG 85 374 374 ARG ARG A . n A 1 86 LYS 86 375 375 LYS LYS A . n A 1 87 HIS 87 376 376 HIS HIS A . n A 1 88 ALA 88 377 377 ALA ALA A . n A 1 89 PHE 89 378 378 PHE PHE A . n A 1 90 VAL 90 379 379 VAL VAL A . n A 1 91 LYS 91 380 380 LYS LYS A . n A 1 92 VAL 92 381 381 VAL VAL A . n A 1 93 TYR 93 382 382 TYR TYR A . n A 1 94 SER 94 383 383 SER SER A . n A 1 95 ARG 95 384 384 ARG ARG A . n A 1 96 HIS 96 385 385 HIS HIS A . n A 1 97 GLU 97 386 386 GLU GLU A . n A 1 98 ALA 98 387 387 ALA ALA A . n A 1 99 GLU 99 388 388 GLU GLU A . n A 1 100 ASN 100 389 389 ASN ASN A . n A 1 101 VAL 101 390 390 VAL VAL A . n A 1 102 LEU 102 391 391 LEU LEU A . n A 1 103 GLN 103 392 392 GLN GLN A . n A 1 104 ASN 104 393 393 ASN ASN A . n A 1 105 PHE 105 394 394 PHE PHE A . n A 1 106 ASN 106 395 395 ASN ASN A . n A 1 107 LYS 107 396 396 LYS LYS A . n A 1 108 ASP 108 397 397 ASP ASP A . n A 1 109 GLY 109 398 398 GLY GLY A . n A 1 110 ALA 110 399 399 ALA ALA A . n A 1 111 LEU 111 400 400 LEU LEU A . n A 1 112 PRO 112 401 401 PRO PRO A . n A 1 113 LEU 113 402 402 LEU LEU A . n A 1 114 ARG 114 403 403 ARG ARG A . n A 1 115 THR 115 404 404 THR THR A . n A 1 116 ARG 116 405 405 ARG ARG A . n A 1 117 TRP 117 406 406 TRP TRP A . n A 1 118 GLY 118 407 407 GLY GLY A . n A 1 119 VAL 119 408 408 VAL VAL A . n A 1 120 GLY 120 409 409 GLY GLY A . n A 1 121 PHE 121 410 410 PHE PHE A . n A 1 122 GLY 122 411 411 GLY GLY A . n A 1 123 PRO 123 412 412 PRO PRO A . n A 1 124 ARG 124 413 413 ARG ARG A . n A 1 125 ASP 125 414 414 ASP ASP A . n A 1 126 CYS 126 415 415 CYS CYS A . n A 1 127 CYS 127 416 416 CYS CYS A . n A 1 128 ASP 128 417 417 ASP ASP A . n A 1 129 TYR 129 418 418 TYR TYR A . n A 1 130 GLN 130 419 419 GLN GLN A . n A 1 131 HIS 131 420 420 HIS HIS A . n A 1 132 GLY 132 421 421 GLY GLY A . n A 1 133 TYR 133 422 422 TYR TYR A . n A 1 134 SER 134 423 423 SER SER A . n A 1 135 ILE 135 424 424 ILE ILE A . n A 1 136 ILE 136 425 425 ILE ILE A . n A 1 137 PRO 137 426 426 PRO PRO A . n A 1 138 MET 138 427 427 MET MET A . n A 1 139 HIS 139 428 428 HIS HIS A . n A 1 140 ARG 140 429 429 ARG ARG A . n A 1 141 LEU 141 430 430 LEU LEU A . n A 1 142 THR 142 431 431 THR THR A . n A 1 143 ASP 143 432 432 ASP ASP A . n A 1 144 ALA 144 433 433 ALA ALA A . n A 1 145 ASP 145 434 434 ASP ASP A . n A 1 146 LYS 146 435 435 LYS LYS A . n A 1 147 LYS 147 436 436 LYS LYS A . n A 1 148 TRP 148 437 437 TRP TRP A . n A 1 149 SER 149 438 438 SER SER A . n A 1 150 VAL 150 439 439 VAL VAL A . n A 1 151 SER 151 440 440 SER SER A . n A 1 152 ALA 152 441 441 ALA ALA A . n A 1 153 GLN 153 442 442 GLN GLN A . n A 1 154 TRP 154 443 443 TRP TRP A . n A 1 155 GLY 155 444 444 GLY GLY A . n A 1 156 GLY 156 445 445 GLY GLY A . n A 1 157 THR 157 446 446 THR THR A . n A 1 158 SER 158 447 447 SER SER A . n A 1 159 GLY 159 448 448 GLY GLY A . n A 1 160 GLN 160 449 449 GLN GLN A . n A 1 161 PRO 161 450 450 PRO PRO A . n A 1 162 LEU 162 451 451 LEU LEU A . n A 1 163 VAL 163 452 452 VAL VAL A . n A 1 164 THR 164 453 453 THR THR A . n A 1 165 GLY 165 454 454 GLY GLY A . n A 1 166 ILE 166 455 455 ILE ILE A . n A 1 167 VAL 167 456 456 VAL VAL A . n A 1 168 PHE 168 457 457 PHE PHE A . n A 1 169 GLU 169 458 458 GLU GLU A . n A 1 170 GLU 170 459 459 GLU GLU A . n A 1 171 PRO 171 460 460 PRO PRO A . n A 1 172 ASP 172 461 461 ASP ASP A . n A 1 173 ILE 173 462 462 ILE ILE A . n A 1 174 ILE 174 463 463 ILE ILE A . n A 1 175 VAL 175 464 464 VAL VAL A . n A 1 176 GLY 176 465 465 GLY GLY A . n A 1 177 GLU 177 466 466 GLU GLU A . n A 1 178 GLY 178 467 467 GLY GLY A . n A 1 179 VAL 179 468 468 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 10010 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-08-02 2 'Structure model' 1 1 2017-10-11 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_nmr_software 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 3 'Structure model' '_pdbx_nmr_software.name' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 11 4 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 Nrd1 600 ? uM '[U-100% 13C; U-100% 15N]' 1 'potassium phosphate' 25 ? mM 'natural abundance' 1 'sodium chloride' 25 ? mM 'natural abundance' 1 DTT 1 ? mM 'natural abundance' 2 Nrd1 800 ? uM 'natural abundance' 2 'potassium phosphate' 25 ? mM 'natural abundance' 2 'sodium chloride' 25 ? mM 'natural abundance' 2 DTT 1 ? mM 'natural abundance' 3 Nrd1 400 ? uM '[U-100% 13C; U-100% 15N] expect for Phe and Leu residues' 3 'potassium phosphate' 25 ? mM 'natural abundance' 3 'sodium chloride' 25 ? mM 'natural abundance' 3 DTT 1 ? mM 'natural abundance' 4 Nrd1 400 ? uM '[U-100% 13C; U-100% 15N] expect for Ile residues' 4 'potassium phosphate' 25 ? mM 'natural abundance' 4 'sodium chloride' 25 ? mM 'natural abundance' 4 DTT 1 ? mM 'natural abundance' 5 Nrd1 400 ? uM '[U-100% 13C; U-100% 15N] expect for Arg residues' 5 'potassium phosphate' 25 ? mM 'natural abundance' 5 'sodium chloride' 25 ? mM 'natural abundance' 5 DTT 1 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 4 HG1 A THR 340 ? ? OE1 A GLU 459 ? ? 1.58 2 15 HG1 A THR 340 ? ? OE1 A GLU 459 ? ? 1.55 3 20 HG1 A THR 340 ? ? OE1 A GLU 459 ? ? 1.54 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 NE A ARG 339 ? ? CZ A ARG 339 ? ? NH1 A ARG 339 ? ? 123.68 120.30 3.38 0.50 N 2 6 NE A ARG 384 ? ? CZ A ARG 384 ? ? NH2 A ARG 384 ? ? 117.29 120.30 -3.01 0.50 N 3 12 NE A ARG 319 ? ? CZ A ARG 319 ? ? NH2 A ARG 319 ? ? 116.94 120.30 -3.36 0.50 N 4 12 NE A ARG 384 ? ? CZ A ARG 384 ? ? NH1 A ARG 384 ? ? 123.40 120.30 3.10 0.50 N 5 12 NE A ARG 384 ? ? CZ A ARG 384 ? ? NH2 A ARG 384 ? ? 116.62 120.30 -3.68 0.50 N 6 15 NE A ARG 429 ? ? CZ A ARG 429 ? ? NH1 A ARG 429 ? ? 123.62 120.30 3.32 0.50 N 7 17 NE A ARG 319 ? ? CZ A ARG 319 ? ? NH2 A ARG 319 ? ? 117.11 120.30 -3.19 0.50 N 8 18 NE A ARG 319 ? ? CZ A ARG 319 ? ? NH2 A ARG 319 ? ? 116.74 120.30 -3.56 0.50 N 9 19 NE A ARG 319 ? ? CZ A ARG 319 ? ? NH2 A ARG 319 ? ? 116.52 120.30 -3.78 0.50 N 10 20 NE A ARG 319 ? ? CZ A ARG 319 ? ? NH2 A ARG 319 ? ? 117.17 120.30 -3.13 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 294 ? ? -66.75 -79.81 2 1 ASN A 295 ? ? -178.20 -31.15 3 1 THR A 297 ? ? -169.99 -30.37 4 1 PHE A 298 ? ? 58.07 -156.03 5 1 ASN A 301 ? ? -109.54 -73.51 6 1 HIS A 303 ? ? -79.79 22.14 7 1 PRO A 307 ? ? -71.36 -158.05 8 1 GLU A 309 ? ? 41.12 -150.04 9 1 LYS A 321 ? ? -110.38 79.41 10 1 ILE A 462 ? ? -108.09 50.19 11 1 ILE A 463 ? ? -57.87 -179.09 12 1 VAL A 464 ? ? -150.74 -48.31 13 1 GLU A 466 ? ? 62.86 -163.62 14 2 ALA A 293 ? ? 70.25 168.40 15 2 PRO A 294 ? ? -73.23 -155.45 16 2 THR A 296 ? ? 46.70 27.18 17 2 THR A 300 ? ? -134.86 -146.65 18 2 ASN A 302 ? ? 69.30 163.47 19 2 PRO A 307 ? ? -71.91 -158.58 20 2 ILE A 462 ? ? -99.56 53.19 21 2 ILE A 463 ? ? -61.74 -178.42 22 2 VAL A 464 ? ? -154.99 -48.86 23 2 GLU A 466 ? ? 76.23 165.66 24 3 PRO A 294 ? ? -66.98 -164.19 25 3 ASN A 301 ? ? -105.73 -73.50 26 3 ASN A 302 ? ? 177.99 166.79 27 3 ASP A 308 ? ? 71.12 -66.76 28 3 GLU A 309 ? ? 44.50 -172.79 29 3 ILE A 462 ? ? -107.37 48.68 30 3 VAL A 464 ? ? -139.57 -47.26 31 4 THR A 297 ? ? -172.82 -35.20 32 4 ASN A 301 ? ? 176.55 -38.53 33 4 HIS A 303 ? ? -143.29 15.05 34 4 PRO A 307 ? ? -68.82 -169.87 35 4 LYS A 321 ? ? -110.17 79.40 36 4 ILE A 462 ? ? -103.97 48.94 37 4 VAL A 464 ? ? -140.29 -54.96 38 5 PRO A 294 ? ? -72.50 -157.57 39 5 THR A 296 ? ? 48.66 26.65 40 5 HIS A 303 ? ? -151.68 9.88 41 5 ILE A 463 ? ? -59.62 171.31 42 5 VAL A 464 ? ? -139.27 -58.46 43 6 ILE A 291 ? ? 69.10 75.18 44 6 PRO A 294 ? ? -75.55 -158.31 45 6 THR A 296 ? ? -81.01 48.50 46 6 THR A 300 ? ? -117.02 -76.23 47 6 ASN A 301 ? ? -164.85 -52.94 48 6 ILE A 462 ? ? -90.65 55.06 49 6 ILE A 463 ? ? -64.81 -176.60 50 6 VAL A 464 ? ? -160.61 -49.72 51 7 THR A 297 ? ? -172.23 -28.93 52 7 PHE A 298 ? ? 62.80 -148.99 53 7 ASN A 301 ? ? -97.32 -78.84 54 7 PRO A 307 ? ? -68.85 -172.27 55 7 LYS A 321 ? ? -117.26 70.29 56 7 ILE A 462 ? ? -102.34 52.38 57 7 ILE A 463 ? ? -64.37 -178.16 58 7 VAL A 464 ? ? -153.63 -39.92 59 8 THR A 300 ? ? 69.64 -74.98 60 8 ASN A 301 ? ? -150.63 17.08 61 8 TYR A 306 ? ? -116.14 65.99 62 8 ASP A 308 ? ? 77.27 36.91 63 8 LYS A 321 ? ? -117.04 66.78 64 8 ILE A 462 ? ? -102.35 52.14 65 8 ILE A 463 ? ? -59.68 -178.60 66 8 VAL A 464 ? ? -157.97 -44.91 67 9 ILE A 291 ? ? -138.81 -62.79 68 9 THR A 296 ? ? 55.84 11.04 69 9 THR A 297 ? ? -175.88 -35.63 70 9 PHE A 298 ? ? 47.86 -103.18 71 9 THR A 300 ? ? 66.66 -80.85 72 9 ASN A 302 ? ? 68.37 171.92 73 9 HIS A 303 ? ? -146.17 16.74 74 9 LYS A 321 ? ? -114.51 74.17 75 9 ILE A 462 ? ? -104.30 50.24 76 9 ILE A 463 ? ? -58.21 171.15 77 9 VAL A 464 ? ? -139.50 -43.52 78 10 PRO A 294 ? ? -67.14 -74.12 79 10 ASN A 295 ? ? 42.49 88.87 80 10 THR A 297 ? ? -171.07 9.07 81 10 THR A 300 ? ? -131.12 -42.06 82 10 ASN A 302 ? ? 72.65 145.29 83 10 HIS A 303 ? ? -148.40 16.54 84 10 LYS A 321 ? ? -116.50 78.35 85 10 ILE A 463 ? ? -54.25 171.22 86 10 VAL A 464 ? ? -135.29 -54.80 87 10 GLU A 466 ? ? 75.64 -55.11 88 11 ILE A 291 ? ? 53.59 81.78 89 11 PRO A 294 ? ? -71.29 -159.74 90 11 THR A 300 ? ? -131.57 -68.57 91 11 ASN A 301 ? ? -176.06 -42.50 92 11 HIS A 303 ? ? -143.51 12.17 93 11 TYR A 306 ? ? -160.63 61.98 94 11 ASP A 308 ? ? -147.92 22.92 95 11 LYS A 351 ? ? -124.96 -167.77 96 11 ASN A 371 ? ? -102.63 79.45 97 11 PRO A 450 ? ? -64.18 99.23 98 11 ILE A 462 ? ? -108.16 51.18 99 11 ILE A 463 ? ? -56.20 173.37 100 11 VAL A 464 ? ? -133.92 -60.35 101 12 ILE A 291 ? ? -126.65 -53.74 102 12 PRO A 294 ? ? -74.04 -156.00 103 12 THR A 300 ? ? -122.20 -65.11 104 12 ASN A 301 ? ? -172.40 137.47 105 12 ASN A 302 ? ? 64.42 165.80 106 12 ASP A 308 ? ? 74.76 -62.78 107 12 GLU A 309 ? ? 44.58 -173.33 108 12 ILE A 462 ? ? -102.52 54.74 109 12 ILE A 463 ? ? -59.86 178.87 110 12 VAL A 464 ? ? -157.05 -45.98 111 13 THR A 297 ? ? -176.57 -33.98 112 13 PHE A 298 ? ? 55.32 -154.28 113 13 THR A 300 ? ? 74.99 -46.60 114 13 ASN A 302 ? ? -176.47 -41.94 115 13 HIS A 303 ? ? 56.41 17.42 116 13 PRO A 307 ? ? -72.48 -157.92 117 13 GLU A 309 ? ? 37.94 -151.26 118 13 ILE A 462 ? ? -102.47 50.22 119 13 ILE A 463 ? ? -54.92 170.64 120 13 VAL A 464 ? ? -138.36 -38.33 121 14 PRO A 294 ? ? -72.10 -157.64 122 14 THR A 296 ? ? 45.47 28.06 123 14 THR A 300 ? ? -116.94 -164.23 124 14 HIS A 303 ? ? -154.82 16.97 125 14 ALA A 363 ? ? -173.24 -178.24 126 14 SER A 447 ? ? -55.74 100.75 127 15 THR A 297 ? ? -164.13 -31.65 128 15 PHE A 298 ? ? 48.17 -150.61 129 15 ILE A 462 ? ? -101.32 58.45 130 15 VAL A 464 ? ? -134.51 -66.89 131 16 ILE A 291 ? ? 71.42 145.38 132 16 ALA A 293 ? ? 69.52 169.32 133 16 PRO A 294 ? ? -70.78 -157.60 134 16 THR A 296 ? ? 48.25 29.53 135 16 THR A 300 ? ? -153.06 8.81 136 16 ASN A 301 ? ? -106.90 -66.91 137 16 VAL A 464 ? ? -136.24 -47.86 138 17 THR A 297 ? ? -168.47 -32.13 139 17 ASN A 302 ? ? -159.82 -102.77 140 17 HIS A 303 ? ? -160.13 18.65 141 17 LYS A 321 ? ? -115.98 77.72 142 17 ILE A 462 ? ? -103.67 47.03 143 17 ILE A 463 ? ? -54.37 179.38 144 17 VAL A 464 ? ? -155.18 -41.09 145 17 GLU A 466 ? ? -153.25 -67.24 146 18 ILE A 291 ? ? 55.99 73.24 147 18 PRO A 294 ? ? -72.25 -155.41 148 18 ASN A 301 ? ? -130.48 -70.96 149 18 PRO A 307 ? ? -68.73 -83.47 150 18 GLU A 459 ? ? -38.11 121.00 151 18 ILE A 462 ? ? -107.16 46.27 152 18 GLU A 466 ? ? -164.79 -59.73 153 19 THR A 296 ? ? 78.99 -1.64 154 19 THR A 297 ? ? -164.02 -34.39 155 19 PHE A 298 ? ? 46.20 75.74 156 19 ASN A 302 ? ? 64.93 -175.51 157 19 ASP A 308 ? ? -82.35 46.64 158 19 ILE A 462 ? ? -101.76 52.34 159 19 ILE A 463 ? ? -58.55 172.81 160 19 VAL A 464 ? ? -141.19 -48.75 161 20 ASN A 295 ? ? 34.37 77.22 162 20 THR A 297 ? ? -170.15 13.10 163 20 THR A 300 ? ? -160.63 67.43 164 20 ASN A 301 ? ? 70.54 161.51 165 20 ASN A 302 ? ? 64.54 147.68 166 20 HIS A 303 ? ? -144.96 11.51 167 20 PRO A 307 ? ? -73.57 -156.64 168 20 ILE A 462 ? ? -95.59 46.37 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ILE A 462 ? ? ILE A 463 ? ? 142.72 2 2 ILE A 462 ? ? ILE A 463 ? ? 141.74 3 3 ILE A 462 ? ? ILE A 463 ? ? 137.87 4 4 ILE A 462 ? ? ILE A 463 ? ? 138.75 5 5 ILE A 462 ? ? ILE A 463 ? ? 137.93 6 6 ILE A 462 ? ? ILE A 463 ? ? 146.83 7 7 ILE A 462 ? ? ILE A 463 ? ? 141.47 8 8 ILE A 462 ? ? ILE A 463 ? ? 141.12 9 9 ILE A 462 ? ? ILE A 463 ? ? 139.46 10 10 ILE A 462 ? ? ILE A 463 ? ? 135.26 11 11 ILE A 462 ? ? ILE A 463 ? ? 138.69 12 12 ILE A 462 ? ? ILE A 463 ? ? 140.62 13 13 ILE A 462 ? ? ILE A 463 ? ? 137.74 14 14 ILE A 462 ? ? ILE A 463 ? ? 143.13 15 15 ILE A 462 ? ? ILE A 463 ? ? 140.41 16 16 ILE A 462 ? ? ILE A 463 ? ? 140.53 17 17 ILE A 462 ? ? ILE A 463 ? ? 141.04 18 18 ILE A 462 ? ? ILE A 463 ? ? 140.56 19 19 ILE A 462 ? ? ILE A 463 ? ? 138.26 20 20 ILE A 462 ? ? ILE A 463 ? ? 142.13 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 4 ARG A 339 ? ? 0.078 'SIDE CHAIN' 2 12 ARG A 339 ? ? 0.082 'SIDE CHAIN' 3 13 ARG A 319 ? ? 0.075 'SIDE CHAIN' 4 15 TYR A 422 ? ? 0.066 'SIDE CHAIN' # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #