HEADER HYDROLASE 07-JUN-17 5O6Q TITLE HIGH PRESSURE FLASH COOLED HEN EGG WHITE LYSOZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS HIGH PRESSURE FLASH COOLING, CRYSTAL GROWN WITHOUT CRYOPROTECTANTS, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.THIELMANN,D.QUIRNHEIM PAIS REVDAT 3 17-JAN-24 5O6Q 1 ATOM REVDAT 2 20-DEC-17 5O6Q 1 JRNL REVDAT 1 13-DEC-17 5O6Q 0 JRNL AUTH D.QUIRNHEIM PAIS,B.RATHMANN,J.KOEPKE,C.TOMOVA,P.WURZINGER, JRNL AUTH 2 Y.THIELMANN JRNL TITL A STANDARDIZED TECHNIQUE FOR HIGH-PRESSURE COOLING OF JRNL TITL 2 PROTEIN CRYSTALS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 73 997 2017 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29199979 JRNL DOI 10.1107/S2059798317016357 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 20592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9891 - 3.4915 1.00 1485 157 0.1436 0.1560 REMARK 3 2 3.4915 - 2.7715 1.00 1394 146 0.1630 0.1785 REMARK 3 3 2.7715 - 2.4213 1.00 1380 146 0.1863 0.2079 REMARK 3 4 2.4213 - 2.1999 1.00 1350 143 0.1771 0.2025 REMARK 3 5 2.1999 - 2.0422 1.00 1350 142 0.1709 0.2264 REMARK 3 6 2.0422 - 1.9218 1.00 1353 144 0.1909 0.2131 REMARK 3 7 1.9218 - 1.8256 1.00 1340 141 0.1912 0.2390 REMARK 3 8 1.8256 - 1.7461 0.99 1315 140 0.1986 0.2716 REMARK 3 9 1.7461 - 1.6789 0.99 1327 140 0.2103 0.2365 REMARK 3 10 1.6789 - 1.6210 0.98 1294 135 0.1941 0.2776 REMARK 3 11 1.6210 - 1.5703 0.97 1292 137 0.2194 0.2399 REMARK 3 12 1.5703 - 1.5254 0.96 1289 137 0.2254 0.2511 REMARK 3 13 1.5254 - 1.4852 0.95 1244 132 0.2623 0.3031 REMARK 3 14 1.4852 - 1.4490 0.91 1209 130 0.3014 0.3180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1081 REMARK 3 ANGLE : 0.752 1475 REMARK 3 CHIRALITY : 0.078 153 REMARK 3 PLANARITY : 0.005 195 REMARK 3 DIHEDRAL : 12.048 414 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0410 -7.3567 -18.1508 REMARK 3 T TENSOR REMARK 3 T11: 0.4697 T22: 0.2139 REMARK 3 T33: 0.3241 T12: -0.0050 REMARK 3 T13: 0.1219 T23: -0.0717 REMARK 3 L TENSOR REMARK 3 L11: 2.0933 L22: 5.7636 REMARK 3 L33: 0.8258 L12: 0.8213 REMARK 3 L13: -1.2294 L23: -1.1847 REMARK 3 S TENSOR REMARK 3 S11: -0.4316 S12: 0.2561 S13: -0.4375 REMARK 3 S21: -0.8704 S22: 0.1795 S23: -0.2395 REMARK 3 S31: 0.5306 S32: 0.1939 S33: 0.0667 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4099 -11.9735 -7.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.4103 T22: 0.1867 REMARK 3 T33: 0.3094 T12: -0.0207 REMARK 3 T13: 0.0881 T23: 0.0469 REMARK 3 L TENSOR REMARK 3 L11: 3.1559 L22: 7.4830 REMARK 3 L33: 1.5799 L12: -3.1453 REMARK 3 L13: 1.0794 L23: 1.0901 REMARK 3 S TENSOR REMARK 3 S11: 0.0417 S12: -0.1070 S13: -0.6409 REMARK 3 S21: -0.2060 S22: -0.0717 S23: 0.2523 REMARK 3 S31: 0.5268 S32: 0.1397 S33: 0.0502 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6334 0.1889 -15.0398 REMARK 3 T TENSOR REMARK 3 T11: 0.2824 T22: 0.1787 REMARK 3 T33: 0.2329 T12: -0.0171 REMARK 3 T13: 0.0244 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 6.8141 L22: 2.2619 REMARK 3 L33: 1.2507 L12: 3.7592 REMARK 3 L13: -0.9460 L23: -0.8808 REMARK 3 S TENSOR REMARK 3 S11: -0.1563 S12: 0.0254 S13: -0.1434 REMARK 3 S21: -0.1807 S22: 0.0614 S23: -0.0253 REMARK 3 S31: 0.1528 S32: -0.1018 S33: 0.1038 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2911 14.7347 -4.3008 REMARK 3 T TENSOR REMARK 3 T11: 0.2254 T22: 0.2539 REMARK 3 T33: 0.2660 T12: 0.0440 REMARK 3 T13: 0.0480 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 9.2098 L22: 2.8539 REMARK 3 L33: 3.2345 L12: 3.4750 REMARK 3 L13: -1.0901 L23: -0.0144 REMARK 3 S TENSOR REMARK 3 S11: 0.1296 S12: -0.3790 S13: 0.6931 REMARK 3 S21: -0.0609 S22: -0.0041 S23: 0.1098 REMARK 3 S31: -0.0968 S32: -0.9242 S33: -0.0934 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2241 7.3160 -2.1481 REMARK 3 T TENSOR REMARK 3 T11: 0.2158 T22: 0.2075 REMARK 3 T33: 0.1872 T12: -0.0115 REMARK 3 T13: 0.0429 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 7.5369 L22: 3.5755 REMARK 3 L33: 2.5104 L12: 2.7445 REMARK 3 L13: 1.1459 L23: -2.0248 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: -0.5053 S13: 0.0266 REMARK 3 S21: 0.2766 S22: -0.1577 S23: 0.0309 REMARK 3 S31: 0.2665 S32: -0.1141 S33: 0.0710 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7249 4.7695 4.8999 REMARK 3 T TENSOR REMARK 3 T11: 0.4195 T22: 0.4300 REMARK 3 T33: 0.2179 T12: -0.0528 REMARK 3 T13: -0.0011 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 5.4771 L22: 2.8890 REMARK 3 L33: 3.4808 L12: -0.2043 REMARK 3 L13: -2.1191 L23: 2.8442 REMARK 3 S TENSOR REMARK 3 S11: 0.1811 S12: -0.9531 S13: -0.3694 REMARK 3 S21: 1.0851 S22: -0.4431 S23: 0.0042 REMARK 3 S31: 0.4450 S32: -0.1896 S33: 0.2556 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2086 -2.1641 -6.0457 REMARK 3 T TENSOR REMARK 3 T11: 0.2670 T22: 0.1915 REMARK 3 T33: 0.2961 T12: 0.0463 REMARK 3 T13: 0.0471 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 7.6929 L22: 3.8223 REMARK 3 L33: 0.9302 L12: 4.6712 REMARK 3 L13: -1.0985 L23: -0.1969 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: -0.1168 S13: -0.6532 REMARK 3 S21: -0.1211 S22: -0.1359 S23: -0.4282 REMARK 3 S31: 0.2690 S32: 0.1260 S33: 0.2391 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1637 0.0615 -5.3593 REMARK 3 T TENSOR REMARK 3 T11: 0.3329 T22: 0.2825 REMARK 3 T33: 0.2846 T12: -0.0138 REMARK 3 T13: 0.0430 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 3.5764 L22: 7.9553 REMARK 3 L33: 9.7862 L12: -1.4500 REMARK 3 L13: 2.9604 L23: -6.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.4791 S13: 0.1611 REMARK 3 S21: 0.5184 S22: -0.2146 S23: 0.2062 REMARK 3 S31: -0.4315 S32: -0.1411 S33: 0.1819 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4984 -8.5669 -19.6187 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.2387 REMARK 3 T33: 0.3478 T12: -0.1084 REMARK 3 T13: 0.0015 T23: -0.0666 REMARK 3 L TENSOR REMARK 3 L11: 8.2193 L22: 6.2912 REMARK 3 L33: 8.6555 L12: -6.1463 REMARK 3 L13: -6.0379 L23: 7.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.2228 S12: 0.6528 S13: -1.0071 REMARK 3 S21: -0.1562 S22: -0.2283 S23: 0.5568 REMARK 3 S31: 0.8135 S32: -0.6072 S33: 0.5132 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5O6Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1200004822. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20967 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 38.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 24.90 REMARK 200 R MERGE (I) : 0.04809 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.85600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2VB1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LYSOZYME WAS DISSOLVED IN 0.02 M REMARK 280 SODIUM ACETATE PH 4.6 TO YIELD 20 MG/ML AND MIXED 1:1 WITH 0.8 M REMARK 280 SODIUM CHLORIDE AND 0.1 M SODIUM ACETATE PH 4.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.63500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.97500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.97500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.95250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.97500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.97500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.31750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.97500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.97500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.95250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.97500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.97500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.31750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.63500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 310 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 342 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 432 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 380 O HOH A 396 2.01 REMARK 500 O ARG A 128 O HOH A 302 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 396 O HOH A 396 8554 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 60 O REMARK 620 2 CYS A 64 O 86.9 REMARK 620 3 SER A 72 OG 89.5 163.6 REMARK 620 4 ARG A 73 O 96.0 91.2 105.0 REMARK 620 5 HOH A 363 O 98.6 84.5 80.3 164.5 REMARK 620 6 HOH A 386 O 173.5 97.7 84.9 88.6 77.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 206 DBREF 5O6Q A 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET NA A 201 1 HET CL A 202 1 HET CL A 203 1 HET CL A 204 1 HET CL A 205 1 HET ACT A 206 7 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION FORMUL 2 NA NA 1+ FORMUL 3 CL 4(CL 1-) FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 HOH *135(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.05 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.04 LINK O SER A 60 NA NA A 201 1555 1555 2.25 LINK O CYS A 64 NA NA A 201 1555 1555 2.50 LINK OG SER A 72 NA NA A 201 1555 1555 2.49 LINK O ARG A 73 NA NA A 201 1555 1555 2.47 LINK NA NA A 201 O HOH A 363 1555 1555 2.50 LINK NA NA A 201 O HOH A 386 1555 1555 2.41 SITE 1 AC1 6 SER A 60 CYS A 64 SER A 72 ARG A 73 SITE 2 AC1 6 HOH A 363 HOH A 386 SITE 1 AC2 3 SER A 24 GLY A 26 GLN A 121 SITE 1 AC3 2 HIS A 15 ILE A 88 SITE 1 AC4 5 ASN A 65 GLY A 67 ARG A 68 THR A 69 SITE 2 AC4 5 SER A 72 SITE 1 AC5 2 TYR A 23 ASN A 113 SITE 1 AC6 4 ARG A 5 LYS A 33 PHE A 38 TRP A 123 CRYST1 77.950 77.950 37.270 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026831 0.00000