HEADER HYDROLASE 28-JUN-17 5OBL OBSLTE 09-JUN-21 5OBL 7OBE TITLE X-RAY STRUCTURE OF THE PHOSPHATASE PAPP5 FROM ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE 5; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.16; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: PAPP5, PP5, AT2G42810, F7D19.19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHATASE, PP5, ARABIDOPSIS THALIANA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.VON HORSTEN,L.-O.ESSEN REVDAT 2 09-JUN-21 5OBL 1 OBSLTE REVDAT 1 01-AUG-18 5OBL 0 JRNL AUTH S.VON HORSTEN,L.-O.ESSEN JRNL TITL STRUCTURAL BASE FOR FATTY ACID CONTROL OF JRNL TITL 2 PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 36799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1672 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8428 - 6.8523 0.95 2949 166 0.1381 0.1777 REMARK 3 2 6.8523 - 5.4456 0.96 3005 83 0.1807 0.2711 REMARK 3 3 5.4456 - 4.7592 0.94 2896 168 0.1588 0.2310 REMARK 3 4 4.7592 - 4.3249 0.95 2862 174 0.1439 0.1966 REMARK 3 5 4.3249 - 4.0154 0.94 3029 80 0.1518 0.2053 REMARK 3 6 4.0154 - 3.7790 0.94 2889 166 0.1641 0.2536 REMARK 3 7 3.7790 - 3.5899 0.95 2896 166 0.1805 0.2659 REMARK 3 8 3.5899 - 3.4338 0.94 2943 85 0.2033 0.2752 REMARK 3 9 3.4338 - 3.3017 0.94 2930 166 0.2082 0.2900 REMARK 3 10 3.3017 - 3.1879 0.94 2867 164 0.2289 0.3243 REMARK 3 11 3.1879 - 3.0882 0.94 3011 85 0.2470 0.3702 REMARK 3 12 3.0882 - 3.0000 0.94 2850 169 0.2918 0.3746 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7698 REMARK 3 ANGLE : 1.340 10397 REMARK 3 CHIRALITY : 0.054 1114 REMARK 3 PLANARITY : 0.007 1367 REMARK 3 DIHEDRAL : 14.423 2856 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OBL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1200005190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37619 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1WAO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.0, 50 % PEG 4000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.50500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 ASN A 5 REMARK 465 GLU A 6 REMARK 465 ASN A 7 REMARK 465 SER A 8 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 THR B 3 REMARK 465 LYS B 4 REMARK 465 PHE B 483 REMARK 465 ASN B 484 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 154 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 155 OG1 CG2 REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 PHE A 483 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 154 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 155 OG1 CG2 REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 GLN B 402 CG CD OE1 NE2 REMARK 470 LYS B 471 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA B 93 OH TYR B 299 2.09 REMARK 500 OD1 ASN A 250 O HOH A 601 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 80 O ASN B 7 1556 2.12 REMARK 500 NZ LYS A 25 OD1 ASN B 5 1556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 103.62 -165.70 REMARK 500 ALA A 136 47.84 -73.20 REMARK 500 SER A 138 -166.47 -105.81 REMARK 500 PHE A 153 -77.33 -88.33 REMARK 500 THR A 155 -7.12 79.12 REMARK 500 HIS A 230 60.24 29.01 REMARK 500 ASP A 260 159.06 73.06 REMARK 500 ARG A 261 -61.83 69.34 REMARK 500 MET A 278 -72.40 -62.27 REMARK 500 LEU A 309 -114.65 -128.13 REMARK 500 SER A 412 -124.97 -143.53 REMARK 500 HIS A 413 -19.69 72.56 REMARK 500 GLN A 440 -19.46 -157.63 REMARK 500 MET A 482 -77.28 -41.27 REMARK 500 PHE A 483 -65.06 -151.67 REMARK 500 ASN B 43 103.96 -165.61 REMARK 500 ALA B 136 43.11 -76.89 REMARK 500 PHE B 153 -79.35 -86.09 REMARK 500 THR B 155 -9.59 80.81 REMARK 500 HIS B 230 59.79 30.47 REMARK 500 ASN B 243 -3.36 -140.85 REMARK 500 ASP B 260 160.17 69.27 REMARK 500 ARG B 261 -62.32 67.32 REMARK 500 MET B 278 -71.27 -62.41 REMARK 500 LEU B 309 -119.78 -128.72 REMARK 500 SER B 412 -124.77 -145.55 REMARK 500 HIS B 413 -14.48 72.86 REMARK 500 GLN B 440 -21.95 -156.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 228 OD2 REMARK 620 2 HIS A 230 NE2 104.0 REMARK 620 3 ASP A 257 OD2 77.5 83.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD2 REMARK 620 2 ASN A 289 OD1 100.1 REMARK 620 3 HIS A 338 NE2 86.5 77.0 REMARK 620 4 HIS A 413 ND1 168.2 91.0 92.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 228 OD2 REMARK 620 2 HIS B 230 NE2 93.7 REMARK 620 3 ASP B 257 OD2 87.7 74.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 257 OD2 REMARK 620 2 ASN B 289 OD1 88.5 REMARK 620 3 HIS B 338 NE2 94.6 85.5 REMARK 620 4 HIS B 413 ND1 166.0 93.1 99.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 502 DBREF 5OBL A 1 484 UNP Q84XU2 PPP5_ARATH 1 484 DBREF 5OBL B 1 484 UNP Q84XU2 PPP5_ARATH 1 484 SEQADV 5OBL MET A -20 UNP Q84XU2 INITIATING METHIONINE SEQADV 5OBL GLY A -19 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER A -18 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER A -17 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -16 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -15 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -14 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -13 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -12 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -11 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER A -10 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER A -9 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL GLY A -8 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL LEU A -7 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL VAL A -6 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL PRO A -5 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL ARG A -4 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL GLY A -3 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER A -2 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS A -1 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL MET A 0 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL MET B -20 UNP Q84XU2 INITIATING METHIONINE SEQADV 5OBL GLY B -19 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER B -18 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER B -17 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -16 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -15 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -14 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -13 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -12 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -11 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER B -10 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER B -9 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL GLY B -8 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL LEU B -7 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL VAL B -6 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL PRO B -5 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL ARG B -4 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL GLY B -3 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL SER B -2 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL HIS B -1 UNP Q84XU2 EXPRESSION TAG SEQADV 5OBL MET B 0 UNP Q84XU2 EXPRESSION TAG SEQRES 1 A 505 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 505 LEU VAL PRO ARG GLY SER HIS MET MET GLU THR LYS ASN SEQRES 3 A 505 GLU ASN SER ASP VAL SER ARG ALA GLU GLU PHE LYS SER SEQRES 4 A 505 GLN ALA ASN GLU ALA PHE LYS GLY HIS LYS TYR SER SER SEQRES 5 A 505 ALA ILE ASP LEU TYR THR LYS ALA ILE GLU LEU ASN SER SEQRES 6 A 505 ASN ASN ALA VAL TYR TRP ALA ASN ARG ALA PHE ALA HIS SEQRES 7 A 505 THR LYS LEU GLU GLU TYR GLY SER ALA ILE GLN ASP ALA SEQRES 8 A 505 SER LYS ALA ILE GLU VAL ASP SER ARG TYR SER LYS GLY SEQRES 9 A 505 TYR TYR ARG ARG GLY ALA ALA TYR LEU ALA MET GLY LYS SEQRES 10 A 505 PHE LYS ASP ALA LEU LYS ASP PHE GLN GLN VAL LYS ARG SEQRES 11 A 505 LEU SER PRO ASN ASP PRO ASP ALA THR ARG LYS LEU LYS SEQRES 12 A 505 GLU CYS GLU LYS ALA VAL MET LYS LEU LYS PHE GLU GLU SEQRES 13 A 505 ALA ILE SER VAL PRO VAL SER GLU ARG ARG SER VAL ALA SEQRES 14 A 505 GLU SER ILE ASP PHE HIS THR ILE GLU VAL GLU PRO GLN SEQRES 15 A 505 TYR SER GLY ALA ARG ILE GLU GLY GLU GLU VAL THR LEU SEQRES 16 A 505 ASP PHE VAL LYS THR MET MET GLU ASP PHE LYS ASN GLN SEQRES 17 A 505 LYS THR LEU HIS LYS ARG TYR ALA TYR GLN ILE VAL LEU SEQRES 18 A 505 GLN THR ARG GLN ILE LEU LEU ALA LEU PRO SER LEU VAL SEQRES 19 A 505 ASP ILE SER VAL PRO HIS GLY LYS HIS ILE THR VAL CYS SEQRES 20 A 505 GLY ASP VAL HIS GLY GLN PHE TYR ASP LEU LEU ASN ILE SEQRES 21 A 505 PHE GLU LEU ASN GLY LEU PRO SER GLU GLU ASN PRO TYR SEQRES 22 A 505 LEU PHE ASN GLY ASP PHE VAL ASP ARG GLY SER PHE SER SEQRES 23 A 505 VAL GLU ILE ILE LEU THR LEU PHE ALA PHE LYS CYS MET SEQRES 24 A 505 CYS PRO SER SER ILE TYR LEU ALA ARG GLY ASN HIS GLU SEQRES 25 A 505 SER LYS SER MET ASN LYS ILE TYR GLY PHE GLU GLY GLU SEQRES 26 A 505 VAL ARG SER LYS LEU SER GLU LYS PHE VAL ASP LEU PHE SEQRES 27 A 505 ALA GLU VAL PHE CYS TYR LEU PRO LEU ALA HIS VAL ILE SEQRES 28 A 505 ASN GLY LYS VAL PHE VAL VAL HIS GLY GLY LEU PHE SER SEQRES 29 A 505 VAL ASP GLY VAL LYS LEU SER ASP ILE ARG ALA ILE ASP SEQRES 30 A 505 ARG PHE CYS GLU PRO PRO GLU GLU GLY LEU MET CYS GLU SEQRES 31 A 505 LEU LEU TRP SER ASP PRO GLN PRO LEU PRO GLY ARG GLY SEQRES 32 A 505 PRO SER LYS ARG GLY VAL GLY LEU SER PHE GLY GLY ASP SEQRES 33 A 505 VAL THR LYS ARG PHE LEU GLN ASP ASN ASN LEU ASP LEU SEQRES 34 A 505 LEU VAL ARG SER HIS GLU VAL LYS ASP GLU GLY TYR GLU SEQRES 35 A 505 VAL GLU HIS ASP GLY LYS LEU ILE THR VAL PHE SER ALA SEQRES 36 A 505 PRO ASN TYR CYS ASP GLN MET GLY ASN LYS GLY ALA PHE SEQRES 37 A 505 ILE ARG PHE GLU ALA PRO ASP MET LYS PRO ASN ILE VAL SEQRES 38 A 505 THR PHE SER ALA VAL PRO HIS PRO ASP VAL LYS PRO MET SEQRES 39 A 505 ALA TYR ALA ASN ASN PHE LEU ARG MET PHE ASN SEQRES 1 B 505 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 505 LEU VAL PRO ARG GLY SER HIS MET MET GLU THR LYS ASN SEQRES 3 B 505 GLU ASN SER ASP VAL SER ARG ALA GLU GLU PHE LYS SER SEQRES 4 B 505 GLN ALA ASN GLU ALA PHE LYS GLY HIS LYS TYR SER SER SEQRES 5 B 505 ALA ILE ASP LEU TYR THR LYS ALA ILE GLU LEU ASN SER SEQRES 6 B 505 ASN ASN ALA VAL TYR TRP ALA ASN ARG ALA PHE ALA HIS SEQRES 7 B 505 THR LYS LEU GLU GLU TYR GLY SER ALA ILE GLN ASP ALA SEQRES 8 B 505 SER LYS ALA ILE GLU VAL ASP SER ARG TYR SER LYS GLY SEQRES 9 B 505 TYR TYR ARG ARG GLY ALA ALA TYR LEU ALA MET GLY LYS SEQRES 10 B 505 PHE LYS ASP ALA LEU LYS ASP PHE GLN GLN VAL LYS ARG SEQRES 11 B 505 LEU SER PRO ASN ASP PRO ASP ALA THR ARG LYS LEU LYS SEQRES 12 B 505 GLU CYS GLU LYS ALA VAL MET LYS LEU LYS PHE GLU GLU SEQRES 13 B 505 ALA ILE SER VAL PRO VAL SER GLU ARG ARG SER VAL ALA SEQRES 14 B 505 GLU SER ILE ASP PHE HIS THR ILE GLU VAL GLU PRO GLN SEQRES 15 B 505 TYR SER GLY ALA ARG ILE GLU GLY GLU GLU VAL THR LEU SEQRES 16 B 505 ASP PHE VAL LYS THR MET MET GLU ASP PHE LYS ASN GLN SEQRES 17 B 505 LYS THR LEU HIS LYS ARG TYR ALA TYR GLN ILE VAL LEU SEQRES 18 B 505 GLN THR ARG GLN ILE LEU LEU ALA LEU PRO SER LEU VAL SEQRES 19 B 505 ASP ILE SER VAL PRO HIS GLY LYS HIS ILE THR VAL CYS SEQRES 20 B 505 GLY ASP VAL HIS GLY GLN PHE TYR ASP LEU LEU ASN ILE SEQRES 21 B 505 PHE GLU LEU ASN GLY LEU PRO SER GLU GLU ASN PRO TYR SEQRES 22 B 505 LEU PHE ASN GLY ASP PHE VAL ASP ARG GLY SER PHE SER SEQRES 23 B 505 VAL GLU ILE ILE LEU THR LEU PHE ALA PHE LYS CYS MET SEQRES 24 B 505 CYS PRO SER SER ILE TYR LEU ALA ARG GLY ASN HIS GLU SEQRES 25 B 505 SER LYS SER MET ASN LYS ILE TYR GLY PHE GLU GLY GLU SEQRES 26 B 505 VAL ARG SER LYS LEU SER GLU LYS PHE VAL ASP LEU PHE SEQRES 27 B 505 ALA GLU VAL PHE CYS TYR LEU PRO LEU ALA HIS VAL ILE SEQRES 28 B 505 ASN GLY LYS VAL PHE VAL VAL HIS GLY GLY LEU PHE SER SEQRES 29 B 505 VAL ASP GLY VAL LYS LEU SER ASP ILE ARG ALA ILE ASP SEQRES 30 B 505 ARG PHE CYS GLU PRO PRO GLU GLU GLY LEU MET CYS GLU SEQRES 31 B 505 LEU LEU TRP SER ASP PRO GLN PRO LEU PRO GLY ARG GLY SEQRES 32 B 505 PRO SER LYS ARG GLY VAL GLY LEU SER PHE GLY GLY ASP SEQRES 33 B 505 VAL THR LYS ARG PHE LEU GLN ASP ASN ASN LEU ASP LEU SEQRES 34 B 505 LEU VAL ARG SER HIS GLU VAL LYS ASP GLU GLY TYR GLU SEQRES 35 B 505 VAL GLU HIS ASP GLY LYS LEU ILE THR VAL PHE SER ALA SEQRES 36 B 505 PRO ASN TYR CYS ASP GLN MET GLY ASN LYS GLY ALA PHE SEQRES 37 B 505 ILE ARG PHE GLU ALA PRO ASP MET LYS PRO ASN ILE VAL SEQRES 38 B 505 THR PHE SER ALA VAL PRO HIS PRO ASP VAL LYS PRO MET SEQRES 39 B 505 ALA TYR ALA ASN ASN PHE LEU ARG MET PHE ASN HET MN A 501 1 HET MN A 502 1 HET CL A 503 1 HET MN B 501 1 HET MN B 502 1 HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION FORMUL 3 MN 4(MN 2+) FORMUL 5 CL CL 1- FORMUL 8 HOH *5(H2 O) HELIX 1 AA1 ASP A 9 GLY A 26 1 18 HELIX 2 AA2 LYS A 28 LEU A 42 1 15 HELIX 3 AA3 ASN A 46 LEU A 60 1 15 HELIX 4 AA4 GLU A 62 ASP A 77 1 16 HELIX 5 AA5 TYR A 80 MET A 94 1 15 HELIX 6 AA6 LYS A 96 SER A 111 1 16 HELIX 7 AA7 ASP A 114 ALA A 136 1 23 HELIX 8 AA8 VAL A 139 GLU A 143 5 5 HELIX 9 AA9 THR A 173 ASN A 186 1 14 HELIX 10 AB1 HIS A 191 ALA A 208 1 18 HELIX 11 AB2 GLN A 232 GLY A 244 1 13 HELIX 12 AB3 PHE A 264 CYS A 279 1 16 HELIX 13 AB4 SER A 292 GLY A 300 1 9 HELIX 14 AB5 GLY A 300 LEU A 309 1 10 HELIX 15 AB6 GLU A 311 TYR A 323 1 13 HELIX 16 AB7 LYS A 348 ALA A 354 1 7 HELIX 17 AB8 GLU A 364 SER A 373 1 10 HELIX 18 AB9 GLY A 393 ASN A 404 1 12 HELIX 19 AC1 ASN A 436 GLN A 440 5 5 HELIX 20 AC2 ASN A 477 MET A 482 5 6 HELIX 21 AC3 ASP B 9 GLY B 26 1 18 HELIX 22 AC4 LYS B 28 ASN B 43 1 16 HELIX 23 AC5 ASN B 46 LEU B 60 1 15 HELIX 24 AC6 GLU B 62 ASP B 77 1 16 HELIX 25 AC7 TYR B 80 MET B 94 1 15 HELIX 26 AC8 LYS B 96 LEU B 110 1 15 HELIX 27 AC9 ASP B 114 ALA B 136 1 23 HELIX 28 AD1 VAL B 139 GLU B 143 5 5 HELIX 29 AD2 THR B 173 ASN B 186 1 14 HELIX 30 AD3 HIS B 191 ALA B 208 1 18 HELIX 31 AD4 GLN B 232 GLY B 244 1 13 HELIX 32 AD5 PHE B 264 CYS B 279 1 16 HELIX 33 AD6 SER B 292 GLY B 300 1 9 HELIX 34 AD7 GLY B 300 LEU B 309 1 10 HELIX 35 AD8 GLU B 311 TYR B 323 1 13 HELIX 36 AD9 LYS B 348 ALA B 354 1 7 HELIX 37 AE1 GLY B 365 SER B 373 1 9 HELIX 38 AE2 GLY B 393 ASN B 404 1 12 HELIX 39 AE3 ASN B 436 MET B 441 1 6 HELIX 40 AE4 ASN B 478 MET B 482 5 5 SHEET 1 AA1 6 LEU A 212 ILE A 215 0 SHEET 2 AA1 6 ALA A 327 ILE A 330 1 O VAL A 329 N ILE A 215 SHEET 3 AA1 6 VAL A 334 VAL A 337 -1 O VAL A 336 N HIS A 328 SHEET 4 AA1 6 LEU A 408 ARG A 411 1 O VAL A 410 N PHE A 335 SHEET 5 AA1 6 LEU A 428 VAL A 431 1 O VAL A 431 N ARG A 411 SHEET 6 AA1 6 TYR A 420 GLU A 423 -1 N GLU A 423 O LEU A 428 SHEET 1 AA2 5 ILE A 283 ALA A 286 0 SHEET 2 AA2 5 TYR A 252 ASN A 255 1 N PHE A 254 O TYR A 284 SHEET 3 AA2 5 HIS A 222 CYS A 226 1 N THR A 224 O LEU A 253 SHEET 4 AA2 5 GLY A 445 GLU A 451 -1 O ILE A 448 N VAL A 225 SHEET 5 AA2 5 PRO A 457 PHE A 462 -1 O ASN A 458 N ARG A 449 SHEET 1 AA3 3 ASP A 374 PRO A 375 0 SHEET 2 AA3 3 LEU A 390 PHE A 392 1 O LEU A 390 N ASP A 374 SHEET 3 AA3 3 ARG A 381 PRO A 383 -1 N GLY A 382 O SER A 391 SHEET 1 AA4 6 LEU B 212 ILE B 215 0 SHEET 2 AA4 6 ALA B 327 ILE B 330 1 O VAL B 329 N ILE B 215 SHEET 3 AA4 6 VAL B 334 VAL B 337 -1 O VAL B 336 N HIS B 328 SHEET 4 AA4 6 LEU B 408 ARG B 411 1 O VAL B 410 N PHE B 335 SHEET 5 AA4 6 LEU B 428 VAL B 431 1 O ILE B 429 N ARG B 411 SHEET 6 AA4 6 TYR B 420 GLU B 423 -1 N GLU B 421 O THR B 430 SHEET 1 AA5 5 ILE B 283 ALA B 286 0 SHEET 2 AA5 5 TYR B 252 ASN B 255 1 N PHE B 254 O TYR B 284 SHEET 3 AA5 5 HIS B 222 CYS B 226 1 N CYS B 226 O ASN B 255 SHEET 4 AA5 5 GLY B 445 GLU B 451 -1 O ILE B 448 N VAL B 225 SHEET 5 AA5 5 PRO B 457 PHE B 462 -1 O ASN B 458 N ARG B 449 SHEET 1 AA6 3 ASP B 374 PRO B 375 0 SHEET 2 AA6 3 LEU B 390 PHE B 392 1 O LEU B 390 N ASP B 374 SHEET 3 AA6 3 ARG B 381 PRO B 383 -1 N GLY B 382 O SER B 391 LINK OD2 ASP A 228 MN MN A 501 1555 1555 2.01 LINK NE2 HIS A 230 MN MN A 501 1555 1555 2.11 LINK OD2 ASP A 257 MN MN A 501 1555 1555 2.14 LINK OD2 ASP A 257 MN MN A 502 1555 1555 2.46 LINK OD1 ASN A 289 MN MN A 502 1555 1555 2.21 LINK NE2 HIS A 338 MN MN A 502 1555 1555 2.19 LINK ND1 HIS A 413 MN MN A 502 1555 1555 2.16 LINK OD2 ASP B 228 MN MN B 501 1555 1555 2.04 LINK NE2 HIS B 230 MN MN B 501 1555 1555 2.29 LINK OD2 ASP B 257 MN MN B 501 1555 1555 2.31 LINK OD2 ASP B 257 MN MN B 502 1555 1555 2.47 LINK OD1 ASN B 289 MN MN B 502 1555 1555 2.32 LINK NE2 HIS B 338 MN MN B 502 1555 1555 2.07 LINK ND1 HIS B 413 MN MN B 502 1555 1555 2.07 CISPEP 1 ALA A 452 PRO A 453 0 -0.36 CISPEP 2 ALA B 452 PRO B 453 0 -0.19 SITE 1 AC1 5 ASP A 228 HIS A 230 ASP A 257 MN A 502 SITE 2 AC1 5 CL A 503 SITE 1 AC2 7 ASP A 228 ASP A 257 ASN A 289 HIS A 338 SITE 2 AC2 7 HIS A 413 MN A 501 CL A 503 SITE 1 AC3 5 ASP A 257 ASN A 289 HIS A 290 MN A 501 SITE 2 AC3 5 MN A 502 SITE 1 AC4 4 ASP B 228 HIS B 230 ASP B 257 MN B 502 SITE 1 AC5 6 ASP B 228 ASP B 257 ASN B 289 HIS B 338 SITE 2 AC5 6 HIS B 413 MN B 501 CRYST1 51.580 103.010 95.060 90.00 95.56 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019387 0.000000 0.001889 0.00000 SCALE2 0.000000 0.009708 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010569 0.00000