HEADER HYDROLASE 03-JUL-17 5OCV TITLE A RARE LYSOZYME CRYSTAL FORM SOLVED USING HIGH-REDUNDANCY 3D ELECTRON TITLE 2 DIFFRACTION DATA FROM MICRON-SIZED NEEDLE SHAPED CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 TISSUE: EGG WHITE KEYWDS LYSOZYME ACTIVITY, HYDROLASE EXPDTA ELECTRON CRYSTALLOGRAPHY AUTHOR H.XU,H.LEBRETTE,T.YANG,V.SRINIVAS,S.HOVMOLLER,M.HOGBOM,X.ZOU REVDAT 3 17-JAN-24 5OCV 1 REMARK LINK REVDAT 2 11-APR-18 5OCV 1 JRNL REVDAT 1 28-MAR-18 5OCV 0 JRNL AUTH H.XU,H.LEBRETTE,T.YANG,V.SRINIVAS,S.HOVMOLLER,M.HOGBOM,X.ZOU JRNL TITL A RARE LYSOZYME CRYSTAL FORM SOLVED USING HIGHLY REDUNDANT JRNL TITL 2 MULTIPLE ELECTRON DIFFRACTION DATASETS FROM MICRON-SIZED JRNL TITL 3 CRYSTALS. JRNL REF STRUCTURE V. 26 667 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 29551291 JRNL DOI 10.1016/J.STR.2018.02.015 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.7 REMARK 3 NUMBER OF REFLECTIONS : 9516 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6754 - 3.1721 0.86 3380 178 0.1831 0.2112 REMARK 3 2 3.1721 - 2.5182 0.87 3247 171 0.3143 0.3572 REMARK 3 3 2.5182 - 2.2000 0.65 2413 127 0.3265 0.3660 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2054 REMARK 3 ANGLE : 0.550 2783 REMARK 3 CHIRALITY : 0.042 287 REMARK 3 PLANARITY : 0.003 363 REMARK 3 DIHEDRAL : 18.762 1223 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.4157 15.8937 2.5269 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.2178 REMARK 3 T33: 0.4040 T12: 0.0681 REMARK 3 T13: -0.0377 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 6.9403 L22: 4.6836 REMARK 3 L33: 7.0996 L12: 0.0954 REMARK 3 L13: -3.5923 L23: -1.2084 REMARK 3 S TENSOR REMARK 3 S11: -0.2948 S12: -0.6206 S13: 0.0210 REMARK 3 S21: -0.1217 S22: -0.0692 S23: -0.9056 REMARK 3 S31: 0.0629 S32: 0.2406 S33: 0.3938 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 15 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.8638 7.1540 0.0008 REMARK 3 T TENSOR REMARK 3 T11: 0.1702 T22: 0.1819 REMARK 3 T33: 0.2541 T12: 0.0480 REMARK 3 T13: 0.0033 T23: 0.0715 REMARK 3 L TENSOR REMARK 3 L11: 2.3733 L22: 2.8182 REMARK 3 L33: 8.8346 L12: 0.2826 REMARK 3 L13: -0.8421 L23: 0.4582 REMARK 3 S TENSOR REMARK 3 S11: -0.1947 S12: 0.5894 S13: -0.0140 REMARK 3 S21: 0.1386 S22: -0.2092 S23: 0.3330 REMARK 3 S31: -0.3537 S32: -0.1984 S33: 0.4128 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 79.9864 -6.2903 15.6041 REMARK 3 T TENSOR REMARK 3 T11: 0.3593 T22: 0.3437 REMARK 3 T33: 0.5163 T12: -0.0975 REMARK 3 T13: 0.2473 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.9968 L22: 4.9364 REMARK 3 L33: 0.3584 L12: -2.1337 REMARK 3 L13: -0.1633 L23: 0.0003 REMARK 3 S TENSOR REMARK 3 S11: 0.2592 S12: -0.1316 S13: 0.0758 REMARK 3 S21: 0.3406 S22: -0.1478 S23: 0.6395 REMARK 3 S31: -0.2484 S32: -0.1145 S33: -0.0549 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.8009 -2.6518 11.7798 REMARK 3 T TENSOR REMARK 3 T11: 0.3435 T22: 0.1893 REMARK 3 T33: 0.2757 T12: -0.0288 REMARK 3 T13: -0.0688 T23: 0.1068 REMARK 3 L TENSOR REMARK 3 L11: 2.9576 L22: 1.1028 REMARK 3 L33: 3.2828 L12: -1.6825 REMARK 3 L13: -0.9650 L23: -0.0942 REMARK 3 S TENSOR REMARK 3 S11: -0.1015 S12: 0.0035 S13: -0.3148 REMARK 3 S21: -0.0899 S22: 0.4543 S23: 0.4136 REMARK 3 S31: 0.9746 S32: -0.1902 S33: -0.2844 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.5730 0.7748 12.2309 REMARK 3 T TENSOR REMARK 3 T11: 0.3018 T22: 0.1562 REMARK 3 T33: 0.1657 T12: 0.0620 REMARK 3 T13: -0.0485 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 4.3020 L22: 3.0647 REMARK 3 L33: 3.8376 L12: -0.2741 REMARK 3 L13: 0.2660 L23: -2.5437 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: -0.0632 S13: -0.0539 REMARK 3 S21: -0.7332 S22: -0.0065 S23: 0.2284 REMARK 3 S31: -0.0210 S32: 0.1242 S33: 0.1046 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 89 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.3608 4.0880 2.8775 REMARK 3 T TENSOR REMARK 3 T11: 0.0268 T22: 0.1707 REMARK 3 T33: 0.0862 T12: 0.0433 REMARK 3 T13: -0.3501 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.4960 L22: 0.3121 REMARK 3 L33: 2.9222 L12: 0.3925 REMARK 3 L13: 2.0337 L23: 0.3747 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: 0.0021 S13: -0.1867 REMARK 3 S21: 0.0348 S22: 0.1223 S23: -0.0385 REMARK 3 S31: 0.3441 S32: 0.2481 S33: -0.1173 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 79.1092 -1.8217 -3.3240 REMARK 3 T TENSOR REMARK 3 T11: 0.3891 T22: 0.1623 REMARK 3 T33: 0.4273 T12: -0.0022 REMARK 3 T13: -0.0468 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 6.2501 L22: 2.1121 REMARK 3 L33: 8.3771 L12: 2.1185 REMARK 3 L13: 0.8549 L23: 2.0826 REMARK 3 S TENSOR REMARK 3 S11: 0.1515 S12: 0.0584 S13: -1.2323 REMARK 3 S21: 0.1595 S22: 0.0131 S23: -0.0788 REMARK 3 S31: 0.5994 S32: -0.1648 S33: -0.0249 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.8000 15.2941 -6.6331 REMARK 3 T TENSOR REMARK 3 T11: -0.0126 T22: 0.4521 REMARK 3 T33: 0.1274 T12: 0.2061 REMARK 3 T13: -0.1585 T23: 0.1629 REMARK 3 L TENSOR REMARK 3 L11: 2.4960 L22: 5.8849 REMARK 3 L33: 1.4800 L12: 1.2774 REMARK 3 L13: -0.4252 L23: 0.1237 REMARK 3 S TENSOR REMARK 3 S11: -0.4878 S12: -0.1350 S13: -0.0385 REMARK 3 S21: -0.3983 S22: 0.2303 S23: 0.4924 REMARK 3 S31: 0.2486 S32: 0.0334 S33: -0.0036 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.5241 17.9933 12.4372 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.2366 REMARK 3 T33: 0.2246 T12: -0.1450 REMARK 3 T13: -0.0173 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 3.6437 L22: 1.3229 REMARK 3 L33: 3.5519 L12: 0.4709 REMARK 3 L13: 0.3059 L23: 0.8162 REMARK 3 S TENSOR REMARK 3 S11: 0.1781 S12: -0.0124 S13: 0.2534 REMARK 3 S21: 0.0987 S22: 0.2384 S23: -0.0897 REMARK 3 S31: -0.0632 S32: -0.0741 S33: -0.4648 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.9791 26.3421 18.2938 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.1775 REMARK 3 T33: 0.1770 T12: 0.0020 REMARK 3 T13: 0.0749 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 3.1432 L22: 2.9506 REMARK 3 L33: 3.0422 L12: -0.0849 REMARK 3 L13: 0.9677 L23: 1.1834 REMARK 3 S TENSOR REMARK 3 S11: -0.2923 S12: 0.2862 S13: 0.1472 REMARK 3 S21: -0.2162 S22: -0.0084 S23: -0.1972 REMARK 3 S31: -0.4416 S32: 0.1725 S33: 0.2460 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.4069 32.7647 1.4341 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.5444 REMARK 3 T33: 0.3535 T12: 0.0032 REMARK 3 T13: 0.0309 T23: -0.0870 REMARK 3 L TENSOR REMARK 3 L11: 6.7599 L22: 4.5734 REMARK 3 L33: 1.0127 L12: 3.4648 REMARK 3 L13: -0.7430 L23: 0.1855 REMARK 3 S TENSOR REMARK 3 S11: -0.0821 S12: 0.5612 S13: 1.2661 REMARK 3 S21: 0.1485 S22: 0.3146 S23: 0.2916 REMARK 3 S31: -0.0714 S32: 0.0101 S33: -0.3182 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.0359 31.4605 4.8666 REMARK 3 T TENSOR REMARK 3 T11: 0.2121 T22: 0.4559 REMARK 3 T33: 0.3807 T12: 0.1090 REMARK 3 T13: 0.0790 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 7.0159 L22: 9.0406 REMARK 3 L33: 7.8813 L12: 4.6361 REMARK 3 L13: 3.2179 L23: -4.0629 REMARK 3 S TENSOR REMARK 3 S11: -0.4649 S12: 0.5341 S13: 0.1010 REMARK 3 S21: -0.2289 S22: 0.0025 S23: 0.2609 REMARK 3 S31: -0.2502 S32: 0.5413 S33: 0.3547 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.2500 35.7322 2.6486 REMARK 3 T TENSOR REMARK 3 T11: 0.1730 T22: 0.2097 REMARK 3 T33: 0.3545 T12: 0.0782 REMARK 3 T13: 0.0392 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 4.3292 L22: 5.1883 REMARK 3 L33: 9.3080 L12: 1.2117 REMARK 3 L13: 1.9810 L23: -3.2673 REMARK 3 S TENSOR REMARK 3 S11: -0.1155 S12: -0.5096 S13: 0.5590 REMARK 3 S21: -0.3644 S22: -0.0030 S23: 0.5303 REMARK 3 S31: 0.0846 S32: -0.2271 S33: 0.0147 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.9853 34.2448 3.9392 REMARK 3 T TENSOR REMARK 3 T11: 0.6591 T22: 0.3210 REMARK 3 T33: 0.2665 T12: -0.1612 REMARK 3 T13: 0.0377 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 2.9965 L22: 3.1442 REMARK 3 L33: 5.8169 L12: -2.9787 REMARK 3 L13: 3.2795 L23: -3.9017 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: 0.1983 S13: 0.4400 REMARK 3 S21: 1.1745 S22: 0.0739 S23: -0.4519 REMARK 3 S31: -1.2378 S32: 0.8396 S33: 0.2168 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.2307 23.3052 2.4419 REMARK 3 T TENSOR REMARK 3 T11: 0.6674 T22: 0.4383 REMARK 3 T33: 0.1634 T12: -0.1327 REMARK 3 T13: -0.0715 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 6.7193 L22: 1.7601 REMARK 3 L33: 1.9397 L12: -1.5889 REMARK 3 L13: -1.0552 L23: -1.3116 REMARK 3 S TENSOR REMARK 3 S11: 0.4531 S12: 0.8424 S13: -0.7220 REMARK 3 S21: -0.4791 S22: -0.0718 S23: 0.3220 REMARK 3 S31: 0.4655 S32: -0.3365 S33: -0.3673 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.8587 25.9300 12.5084 REMARK 3 T TENSOR REMARK 3 T11: 0.2604 T22: 0.2211 REMARK 3 T33: 0.1685 T12: 0.0076 REMARK 3 T13: -0.0320 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 5.4692 L22: 6.0098 REMARK 3 L33: 3.5916 L12: 2.1298 REMARK 3 L13: -0.0875 L23: 4.2736 REMARK 3 S TENSOR REMARK 3 S11: 0.5167 S12: 0.4104 S13: -0.1580 REMARK 3 S21: 0.2980 S22: 0.3631 S23: -0.1553 REMARK 3 S31: 0.1697 S32: -0.1698 S33: -0.7520 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.8766 35.1064 17.9072 REMARK 3 T TENSOR REMARK 3 T11: 0.2047 T22: 0.2650 REMARK 3 T33: 0.2766 T12: 0.0443 REMARK 3 T13: 0.0912 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 3.4822 L22: 8.6182 REMARK 3 L33: 9.1285 L12: 0.3002 REMARK 3 L13: 5.0202 L23: 3.4129 REMARK 3 S TENSOR REMARK 3 S11: -0.1746 S12: 0.2255 S13: 0.0713 REMARK 3 S21: -0.0539 S22: 0.2046 S23: -0.5205 REMARK 3 S31: -0.3626 S32: 0.0934 S33: -0.0725 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4737 37.2894 16.5919 REMARK 3 T TENSOR REMARK 3 T11: 0.5167 T22: 0.5797 REMARK 3 T33: 0.0480 T12: 0.2223 REMARK 3 T13: 0.1137 T23: -0.1000 REMARK 3 L TENSOR REMARK 3 L11: 1.7028 L22: 3.3708 REMARK 3 L33: 1.3498 L12: -1.0528 REMARK 3 L13: -0.3966 L23: -0.4091 REMARK 3 S TENSOR REMARK 3 S11: -0.1201 S12: 0.4951 S13: 0.0339 REMARK 3 S21: -0.3242 S22: -0.5010 S23: 0.2777 REMARK 3 S31: -0.4554 S32: -0.8078 S33: 0.1274 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9420 30.2063 23.8585 REMARK 3 T TENSOR REMARK 3 T11: 1.0346 T22: 0.3579 REMARK 3 T33: 0.0492 T12: 0.0168 REMARK 3 T13: 0.0232 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 6.3438 L22: 0.3884 REMARK 3 L33: 6.1442 L12: -1.0605 REMARK 3 L13: 3.4019 L23: 0.3837 REMARK 3 S TENSOR REMARK 3 S11: -0.0928 S12: -0.8418 S13: -0.5952 REMARK 3 S21: 0.5835 S22: 0.1347 S23: 0.2884 REMARK 3 S31: 1.5836 S32: -0.4177 S33: -0.0817 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.9761 18.1791 20.7754 REMARK 3 T TENSOR REMARK 3 T11: 0.3924 T22: 0.5199 REMARK 3 T33: 0.3697 T12: -0.3425 REMARK 3 T13: 0.1670 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 2.6403 L22: 5.0057 REMARK 3 L33: 4.0879 L12: 1.4725 REMARK 3 L13: 1.0989 L23: 1.7206 REMARK 3 S TENSOR REMARK 3 S11: -0.2181 S12: 0.0194 S13: -0.2612 REMARK 3 S21: 0.1056 S22: -0.3742 S23: 0.1118 REMARK 3 S31: -0.1310 S32: 0.0786 S33: 0.2710 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OCV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005582. REMARK 240 REMARK 240 EXPERIMENTAL DETAILS REMARK 240 RECONSTRUCTION METHOD : CRYSTALLOGRAPHY REMARK 240 SAMPLE TYPE : 3D ARRAY REMARK 240 SPECIMEN TYPE : NULL REMARK 240 DATA ACQUISITION REMARK 240 DATE OF DATA COLLECTION : NULL REMARK 240 TEMPERATURE (KELVIN) : 97.0 REMARK 240 PH : 3.40 REMARK 240 NUMBER OF CRYSTALS USED : 33 REMARK 240 MICROSCOPE MODEL : JEOL 2100 REMARK 240 DETECTOR TYPE : OTHER REMARK 240 ACCELERATION VOLTAGE (KV) : 200 REMARK 240 NUMBER OF UNIQUE REFLECTIONS : 9516 REMARK 240 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 240 RESOLUTION RANGE LOW (A) : 28.680 REMARK 240 DATA SCALING SOFTWARE : NULL REMARK 240 COMPLETENESS FOR RANGE (%) : 79.7 REMARK 240 DATA REDUNDANCY : 42.40 REMARK 240 IN THE HIGHEST RESOLUTION SHELL REMARK 240 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) :2.20 REMARK 240 HIGHEST RESOLUTION SHELL, RANGE LOW (A) :2.28 REMARK 240 COMPLETENESS FOR SHELL (%) : 64.3 REMARK 240 DATA REDUNDANCY IN SHELL : 25.90 REMARK 240 R MERGE FOR SHELL (I) : NULL REMARK 240 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 240 SOFTWARE USED : PHASER REMARK 240 STARTING MODEL : 1AKI REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.86000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.86000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 129 C O REMARK 470 LEU B 129 C O REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 60 O REMARK 620 2 CYS B 64 O 67.2 REMARK 620 3 SER B 72 OG 103.1 163.5 REMARK 620 4 ARG B 73 O 86.6 88.1 105.1 REMARK 620 5 HOH B 305 O 96.9 95.0 72.3 176.0 REMARK 620 6 HOH B 308 O 175.2 114.4 76.5 88.9 87.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 201 DBREF 5OCV A 1 129 UNP P00698 LYSC_CHICK 19 147 DBREF 5OCV B 1 129 UNP P00698 LYSC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU SEQRES 1 B 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 B 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 B 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 B 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 B 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 B 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 B 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 B 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 B 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 B 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET NA B 201 1 HETNAM NA SODIUM ION FORMUL 3 NA NA 1+ FORMUL 4 HOH *25(H2 O) HELIX 1 1 ARG A 5 ARG A 14 1 10 HELIX 2 2 TYR A 20 GLY A 22 5 3 HELIX 3 3 LEU A 25 SER A 36 1 12 HELIX 4 4 CYS A 80 LEU A 84 5 5 HELIX 5 5 THR A 89 SER A 100 1 12 HELIX 6 6 GLY A 104 ALA A 107 5 4 HELIX 7 7 VAL A 109 ARG A 114 1 6 HELIX 8 8 VAL A 120 ALA A 122 5 3 HELIX 9 9 ARG B 5 ARG B 14 1 10 HELIX 10 10 TYR B 20 GLY B 22 5 3 HELIX 11 11 LEU B 25 SER B 36 1 12 HELIX 12 12 CYS B 80 LEU B 84 5 5 HELIX 13 13 THR B 89 VAL B 99 1 11 HELIX 14 14 GLY B 104 ALA B 107 5 4 HELIX 15 15 VAL B 109 ARG B 114 1 6 HELIX 16 16 VAL B 120 ILE B 124 5 5 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SHEET 1 AA2 3 THR B 43 ARG B 45 0 SHEET 2 AA2 3 THR B 51 TYR B 53 -1 O ASP B 52 N ASN B 44 SHEET 3 AA2 3 ILE B 58 ASN B 59 -1 O ILE B 58 N TYR B 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.03 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.02 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 SSBOND 5 CYS B 6 CYS B 127 1555 1555 2.03 SSBOND 6 CYS B 30 CYS B 115 1555 1555 2.03 SSBOND 7 CYS B 64 CYS B 80 1555 1555 2.03 SSBOND 8 CYS B 76 CYS B 94 1555 1555 2.04 LINK O SER B 60 NA NA B 201 1555 1555 2.61 LINK O CYS B 64 NA NA B 201 1555 1555 2.53 LINK OG SER B 72 NA NA B 201 1555 1555 2.55 LINK O ARG B 73 NA NA B 201 1555 1555 2.92 LINK NA NA B 201 O HOH B 305 1555 1555 2.63 LINK NA NA B 201 O HOH B 308 1555 1555 2.64 SITE 1 AC1 7 SER B 60 CYS B 64 ASN B 65 SER B 72 SITE 2 AC1 7 ARG B 73 HOH B 305 HOH B 308 CRYST1 67.720 103.880 31.650 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009626 0.000000 0.00000 SCALE3 0.000000 0.000000 0.031596 0.00000