HEADER MEMBRANE PROTEIN 08-JUL-17 5OEK TITLE PUTATIVE ACTIVE DIMERIC STATE OF GHR TRANSMEMBRANE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROWTH HORMONE RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GH RECEPTOR,SOMATOTROPIN RECEPTOR; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE AUTHOR SEQUENCE NUMBERING CORRESPONDS TO THE COMPND 7 SWISS-PROT ANNOTATION OF THE HUMAN GROWTH HORMONE RECEPTOR (GHR), COMPND 8 P10912 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GHR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DIMER, GHR, GROWTH HORMONE RECEPTOR, HOMODIMER, HUMAN, RECEPTOR, KEYWDS 2 TRANSMEMBRANE DOMAIN, TYROSINE KINASE, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.M.LESOVOY,E.V.BOCHAROV,O.V.BOCHAROVA,A.S.URBAN,A.S.ARSENIEV REVDAT 3 14-JUN-23 5OEK 1 REMARK REVDAT 2 08-MAY-19 5OEK 1 REMARK REVDAT 1 11-APR-18 5OEK 0 JRNL AUTH E.V.BOCHAROV,D.M.LESOVOY,O.V.BOCHAROVA,A.S.URBAN,K.V.PAVLOV, JRNL AUTH 2 P.E.VOLYNSKY,R.G.EFREMOV,A.S.ARSENIEV JRNL TITL STRUCTURAL BASIS OF THE SIGNAL TRANSDUCTION VIA JRNL TITL 2 TRANSMEMBRANE DOMAIN OF THE HUMAN GROWTH HORMONE RECEPTOR. JRNL REF BIOCHIM. BIOPHYS. ACTA V.1862 1410 2018 JRNL REFN ISSN 0006-3002 JRNL PMID 29571748 JRNL DOI 10.1016/J.BBAGEN.2018.03.022 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH O.V.BOCHAROVA,P.K.KUZMICHEV,A.S.URBAN,S.A.GONCHARUK, REMARK 1 AUTH 2 E.V.BOCHAROV,A.S.ARSENYEV REMARK 1 TITL PREPARATION OF TRANSMEMBRANE FRAGMENTS GROWTH HORMONE REMARK 1 TITL 2 RECEPTOR GHR IN A CELL-FREE EXPRESSION SYSTEM FOR STRUCTURAL REMARK 1 TITL 3 STUDIES. REMARK 1 REF BIOORG. KHIM. V. 41 701 2015 REMARK 1 REFN ISSN 0132-3423 REMARK 1 PMID 27125024 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.97 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OEK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005327. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 40 REMARK 210 PRESSURE : AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 0.7 MM [U-99% 13C; U-99% 15N] REMARK 210 GHRTM, 1.2 MM GHRTM, 100 MM [U- REMARK 210 99% 2H] DPC, 0.3 MM SODIUM AZIDE, REMARK 210 8 MM TCEP, 10 MM CITRIC ACID, REMARK 210 20 MM NA2HPO4, 95% H2O/5% D2O; REMARK 210 0.8 MM [U-99% 15N] GHRTM, 50 MM REMARK 210 [U-99% 2H] DPC, 0.3 MM SODIUM REMARK 210 AZIDE, 8 MM TCEP, 10 MM CITRIC REMARK 210 ACID, 20 MM NA2HPO4, 95% H2O/5% REMARK 210 D2O; 0.8 MM [U-99% 13C; U-99% REMARK 210 15N] GHRTM, 50 MM [U-99% 2H] DPC, REMARK 210 0.3 MM SODIUM AZIDE, 8 MM TCEP, REMARK 210 10 MM CITRIC ACID, 20 MM NA2HPO4, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N,13C-F1-FILTERED/F3-EDITED REMARK 210 -NOESY; 3D 1H-13C(CONSTANT TIME) REMARK 210 NOESY ALIPHATIC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-15N(TROSY) REMARK 210 NOESY; 3D 1H-13C NOESY AROMATIC; REMARK 210 3D 1H-15N(TROSY) HNHB; 3D 1H- REMARK 210 15N(TROSY) HNHA; 3D 1H-15N(TROSY) REMARK 210 HNCO; 3D 1H-15N(TROSY) HNCA; 3D REMARK 210 1H-15N(TROSY) HN(CA)CO; 3D 1H- REMARK 210 15N(TROSY) HN(CO)CA; 2D 1H-15N REMARK 210 HSQC; 2D 1H-15N TROSY; 2D 1H- REMARK 210 INEPT-13CA-DETECTED; 2D 1H-13C REMARK 210 CONSTANT TIME HSQC ALIPHATIC; 2D REMARK 210 1H-13C CONSTANT TIME HSQC REMARK 210 AROMATIC; 2D 1H-13C(TROSY) REMARK 210 CONSTANT TIME HSQC AROMATIC; 3D REMARK 210 HCCH-TOCSY; 3D 1H-13C CONSTANT REMARK 210 TIME HCCH-TOCSY; 2D 1H-15N CSA/ REMARK 210 DIPOLE CROSS-CORRELATION; 2D 1H- REMARK 210 15N(TROSY) CLEANEX REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.2, CARA 1.9, REMARK 210 MATHEMATICA LINUX, MDDNMR 2.4 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO B 266 81.79 -69.75 REMARK 500 2 ASP A 262 60.89 63.32 REMARK 500 2 ASP B 262 62.29 63.11 REMARK 500 2 PHE B 265 73.18 -151.18 REMARK 500 2 PRO B 266 95.35 -69.74 REMARK 500 3 PHE A 265 72.76 -170.45 REMARK 500 3 PRO B 266 94.59 -69.76 REMARK 500 4 PHE A 265 160.69 61.48 REMARK 500 4 PHE B 265 65.53 60.14 REMARK 500 5 PHE A 263 61.70 -100.04 REMARK 500 5 PRO B 266 81.11 -69.81 REMARK 500 6 PHE B 265 73.56 59.72 REMARK 500 7 ASP A 262 68.34 63.10 REMARK 500 7 PHE A 265 73.27 -113.94 REMARK 500 7 PRO A 266 88.98 -69.79 REMARK 500 7 PHE B 265 153.62 64.46 REMARK 500 7 PRO B 266 78.24 -69.67 REMARK 500 8 PRO A 266 85.09 -69.78 REMARK 500 8 PRO B 266 93.80 -69.74 REMARK 500 9 PRO A 266 79.00 -69.71 REMARK 500 9 PHE B 265 73.33 -119.17 REMARK 500 9 PRO B 266 80.46 -69.74 REMARK 500 10 PHE B 265 73.63 60.18 REMARK 500 11 PRO B 266 79.06 -69.72 REMARK 500 11 GLN B 291 172.08 -53.85 REMARK 500 12 ASP A 262 60.57 61.00 REMARK 500 12 ASP B 262 68.29 60.84 REMARK 500 12 PRO B 266 90.56 -69.73 REMARK 500 13 PHE A 265 75.21 -113.36 REMARK 500 13 PRO A 266 -179.35 -69.75 REMARK 500 14 PRO B 266 99.99 -69.77 REMARK 500 14 ILE B 293 75.30 51.91 REMARK 500 15 ASP A 262 67.46 63.98 REMARK 500 15 PHE A 263 173.04 59.78 REMARK 500 15 PRO B 266 78.35 -69.76 REMARK 500 16 PHE A 265 73.27 58.42 REMARK 500 16 GLN B 256 171.47 -53.65 REMARK 500 16 PRO B 266 79.90 -69.77 REMARK 500 17 GLN A 291 103.25 -51.81 REMARK 500 17 MET B 254 -67.59 -96.54 REMARK 500 17 PRO B 266 75.57 -69.77 REMARK 500 18 PHE A 265 66.57 60.07 REMARK 500 19 PRO A 266 92.72 -69.74 REMARK 500 19 PRO B 266 95.33 -69.76 REMARK 500 20 ASP A 262 68.83 60.93 REMARK 500 20 ASP B 262 61.06 61.75 REMARK 500 20 PRO B 266 94.95 -69.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34160 RELATED DB: BMRB REMARK 900 PUTATIVE ACTIVE DIMERIC STATE OF GHR TRANSMEMBRANE DOMAIN DBREF 5OEK A 254 294 UNP P10912 GHR_HUMAN 254 294 DBREF 5OEK B 254 294 UNP P10912 GHR_HUMAN 254 294 SEQADV 5OEK GLY A 252 UNP P10912 EXPRESSION TAG SEQADV 5OEK SER A 253 UNP P10912 EXPRESSION TAG SEQADV 5OEK GLY B 252 UNP P10912 EXPRESSION TAG SEQADV 5OEK SER B 253 UNP P10912 EXPRESSION TAG SEQRES 1 A 43 GLY SER MET SER GLN PHE THR CYS GLU GLU ASP PHE TYR SEQRES 2 A 43 PHE PRO TRP LEU LEU ILE ILE ILE PHE GLY ILE PHE GLY SEQRES 3 A 43 LEU THR VAL MET LEU PHE VAL PHE LEU PHE SER LYS GLN SEQRES 4 A 43 GLN ARG ILE LYS SEQRES 1 B 43 GLY SER MET SER GLN PHE THR CYS GLU GLU ASP PHE TYR SEQRES 2 B 43 PHE PRO TRP LEU LEU ILE ILE ILE PHE GLY ILE PHE GLY SEQRES 3 B 43 LEU THR VAL MET LEU PHE VAL PHE LEU PHE SER LYS GLN SEQRES 4 B 43 GLN ARG ILE LYS HELIX 1 AA1 PHE A 265 ILE A 293 1 29 HELIX 2 AA2 PRO B 266 GLN B 291 1 26 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1