HEADER ANTIBIOTIC 11-JUL-17 5OFT TITLE STRUCTURAL BASIS FOR OXA-48 DIMERIZATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLA OXA-48, BLAOXA-48, KPE71T_00045; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: STAR PRARE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS DIMERIZATION, OXA-48, OXACILLINASE, CARBAPENEMASE, BETA-LACTAMASE, KEYWDS 2 ANTIBIOTIC EXPDTA X-RAY DIFFRACTION AUTHOR B.A.LUND,B.H.B.NESHEIM,H.K.S.LEIROS REVDAT 5 17-JAN-24 5OFT 1 REMARK REVDAT 4 28-NOV-18 5OFT 1 JRNL REVDAT 3 05-SEP-18 5OFT 1 JRNL REVDAT 2 29-AUG-18 5OFT 1 JRNL REVDAT 1 01-AUG-18 5OFT 0 JRNL AUTH B.A.LUND,A.M.THOMASSEN,B.H.B.NESHEIM,T.J.O.CARLSEN, JRNL AUTH 2 J.ISAKSSON,T.CHRISTOPEIT,H.S.LEIROS JRNL TITL THE BIOLOGICAL ASSEMBLY OF OXA-48 REVEALS A DIMER INTERFACE JRNL TITL 2 WITH HIGH CHARGE COMPLEMENTARITY AND VERY HIGH AFFINITY. JRNL REF FEBS J. V. 285 4214 2018 JRNL REFN ISSN 1742-4658 JRNL PMID 30153368 JRNL DOI 10.1111/FEBS.14643 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 11084 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3010 - 5.0761 0.92 2723 142 0.1688 0.2327 REMARK 3 2 5.0761 - 4.0309 0.94 2623 134 0.1506 0.2292 REMARK 3 3 4.0309 - 3.5219 0.95 2598 134 0.1923 0.2093 REMARK 3 4 3.5219 - 3.2001 0.95 2592 138 0.2469 0.3237 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4044 REMARK 3 ANGLE : 0.675 5478 REMARK 3 CHIRALITY : 0.045 578 REMARK 3 PLANARITY : 0.005 706 REMARK 3 DIHEDRAL : 18.248 2372 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.1094 -7.6291 -22.5789 REMARK 3 T TENSOR REMARK 3 T11: 0.9410 T22: 0.2072 REMARK 3 T33: 0.8881 T12: 0.1550 REMARK 3 T13: 0.1155 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.5422 L22: 2.2053 REMARK 3 L33: 1.0762 L12: 0.0139 REMARK 3 L13: -0.4909 L23: -1.1885 REMARK 3 S TENSOR REMARK 3 S11: -0.5562 S12: -0.0897 S13: -0.6055 REMARK 3 S21: 0.1710 S22: 0.0568 S23: 0.0999 REMARK 3 S31: -0.1452 S32: 0.1627 S33: 0.1346 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.2482 -1.0924 -25.6597 REMARK 3 T TENSOR REMARK 3 T11: 0.8878 T22: 0.1985 REMARK 3 T33: 0.5134 T12: -0.0200 REMARK 3 T13: 0.1255 T23: -0.1278 REMARK 3 L TENSOR REMARK 3 L11: 1.7787 L22: 2.7556 REMARK 3 L33: 1.6631 L12: 0.4078 REMARK 3 L13: -0.0753 L23: -0.3962 REMARK 3 S TENSOR REMARK 3 S11: -0.3138 S12: -0.0380 S13: -0.1151 REMARK 3 S21: -0.1483 S22: 0.0305 S23: -0.2682 REMARK 3 S31: 0.6759 S32: 0.0568 S33: 0.2067 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.6152 9.0264 -17.4861 REMARK 3 T TENSOR REMARK 3 T11: 0.5183 T22: 0.2321 REMARK 3 T33: 0.2918 T12: -0.0608 REMARK 3 T13: 0.0962 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 2.0388 L22: 3.3133 REMARK 3 L33: 1.0407 L12: 0.5141 REMARK 3 L13: -0.1469 L23: -0.4256 REMARK 3 S TENSOR REMARK 3 S11: -0.1986 S12: -0.0204 S13: -0.2286 REMARK 3 S21: -0.0333 S22: 0.2644 S23: 0.8500 REMARK 3 S31: 0.4321 S32: -0.1949 S33: -0.0257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.8580 28.3131 -8.9386 REMARK 3 T TENSOR REMARK 3 T11: 0.5214 T22: 0.2546 REMARK 3 T33: 0.4673 T12: -0.0006 REMARK 3 T13: -0.0631 T23: -0.0786 REMARK 3 L TENSOR REMARK 3 L11: 3.4243 L22: 0.9706 REMARK 3 L33: 2.9229 L12: 0.1933 REMARK 3 L13: 0.2580 L23: -0.4161 REMARK 3 S TENSOR REMARK 3 S11: 0.1604 S12: -0.3004 S13: 0.2622 REMARK 3 S21: 0.5685 S22: 0.4338 S23: 0.0892 REMARK 3 S31: -0.4719 S32: -0.0700 S33: -0.6249 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.5369 22.8969 -9.5617 REMARK 3 T TENSOR REMARK 3 T11: 0.4825 T22: 0.2698 REMARK 3 T33: 0.4030 T12: -0.0614 REMARK 3 T13: -0.0939 T23: 0.0990 REMARK 3 L TENSOR REMARK 3 L11: 1.7561 L22: 2.8084 REMARK 3 L33: 2.0724 L12: -0.6242 REMARK 3 L13: -1.5284 L23: -0.8404 REMARK 3 S TENSOR REMARK 3 S11: 0.2424 S12: -0.0385 S13: -0.5303 REMARK 3 S21: 0.3155 S22: -0.2392 S23: -0.2266 REMARK 3 S31: -0.8955 S32: 0.4763 S33: 0.0407 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -66.0281 21.7841 -13.6773 REMARK 3 T TENSOR REMARK 3 T11: 0.5047 T22: 0.4235 REMARK 3 T33: 0.4105 T12: 0.1415 REMARK 3 T13: -0.0703 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 3.2247 L22: 2.2246 REMARK 3 L33: 5.0956 L12: 0.4975 REMARK 3 L13: 0.8279 L23: -0.0811 REMARK 3 S TENSOR REMARK 3 S11: -0.2071 S12: -0.1071 S13: 0.7961 REMARK 3 S21: -0.2479 S22: -0.0819 S23: 0.3405 REMARK 3 S31: -1.3019 S32: -0.9590 S33: 0.2110 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -68.3458 13.1677 -14.5594 REMARK 3 T TENSOR REMARK 3 T11: 0.4111 T22: 0.4474 REMARK 3 T33: 0.3032 T12: 0.0137 REMARK 3 T13: -0.0563 T23: 0.1094 REMARK 3 L TENSOR REMARK 3 L11: 2.4783 L22: 5.0627 REMARK 3 L33: 2.0680 L12: -1.1616 REMARK 3 L13: -0.8915 L23: -2.3942 REMARK 3 S TENSOR REMARK 3 S11: -0.6008 S12: 0.0079 S13: -0.0953 REMARK 3 S21: -0.1468 S22: 0.2983 S23: 1.0063 REMARK 3 S31: -0.2502 S32: -0.8176 S33: -0.1112 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.6692 14.8010 -23.6499 REMARK 3 T TENSOR REMARK 3 T11: 0.4813 T22: 0.3168 REMARK 3 T33: 0.2718 T12: -0.0340 REMARK 3 T13: -0.0759 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.0906 L22: 2.1558 REMARK 3 L33: 3.1622 L12: -0.9597 REMARK 3 L13: -1.1102 L23: -0.1761 REMARK 3 S TENSOR REMARK 3 S11: -0.2625 S12: 0.3152 S13: 0.0612 REMARK 3 S21: -0.3220 S22: 0.0030 S23: 0.0818 REMARK 3 S31: 0.2691 S32: -0.4596 S33: 0.2888 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.1308 6.0132 -19.3205 REMARK 3 T TENSOR REMARK 3 T11: 0.5373 T22: 0.2383 REMARK 3 T33: 0.3807 T12: 0.0377 REMARK 3 T13: 0.0584 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 1.8175 L22: 1.2893 REMARK 3 L33: 1.1690 L12: 0.3761 REMARK 3 L13: 0.7044 L23: 0.2921 REMARK 3 S TENSOR REMARK 3 S11: -0.1343 S12: 0.0341 S13: -0.1349 REMARK 3 S21: -0.1282 S22: -0.0381 S23: -0.1500 REMARK 3 S31: 0.5006 S32: 0.0188 S33: 0.1278 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8835 35.1086 -22.2028 REMARK 3 T TENSOR REMARK 3 T11: 0.6852 T22: 0.8681 REMARK 3 T33: 0.7553 T12: -0.3799 REMARK 3 T13: -0.3140 T23: 0.1668 REMARK 3 L TENSOR REMARK 3 L11: 3.1787 L22: 0.7979 REMARK 3 L33: 4.1108 L12: -0.3490 REMARK 3 L13: -0.9703 L23: -1.4186 REMARK 3 S TENSOR REMARK 3 S11: 0.5711 S12: -0.4477 S13: -0.3149 REMARK 3 S21: 0.7190 S22: -0.2585 S23: -0.9552 REMARK 3 S31: -0.8404 S32: 0.9361 S33: -0.1922 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0399 37.8234 -24.2823 REMARK 3 T TENSOR REMARK 3 T11: 0.5867 T22: 0.6086 REMARK 3 T33: 0.4762 T12: -0.2244 REMARK 3 T13: -0.1844 T23: 0.1537 REMARK 3 L TENSOR REMARK 3 L11: 4.2971 L22: 4.0024 REMARK 3 L33: 1.8298 L12: 0.0639 REMARK 3 L13: -1.2414 L23: 0.6873 REMARK 3 S TENSOR REMARK 3 S11: -0.3144 S12: -0.0574 S13: 0.7392 REMARK 3 S21: 0.5879 S22: -0.0623 S23: -0.2896 REMARK 3 S31: -0.5736 S32: 0.8081 S33: 0.2549 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.2000 28.9798 -41.4511 REMARK 3 T TENSOR REMARK 3 T11: 0.3335 T22: 0.3670 REMARK 3 T33: 0.3389 T12: 0.0358 REMARK 3 T13: -0.0716 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 3.3438 L22: 1.3343 REMARK 3 L33: 3.0509 L12: -0.5388 REMARK 3 L13: 0.0180 L23: -0.1672 REMARK 3 S TENSOR REMARK 3 S11: -0.0729 S12: 0.9148 S13: -0.2492 REMARK 3 S21: 0.3185 S22: -0.0615 S23: -0.2610 REMARK 3 S31: -0.1409 S32: 0.3521 S33: 0.2007 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.3795 16.2925 -46.2450 REMARK 3 T TENSOR REMARK 3 T11: 0.5302 T22: 0.4608 REMARK 3 T33: 0.3814 T12: 0.0070 REMARK 3 T13: -0.0122 T23: -0.0516 REMARK 3 L TENSOR REMARK 3 L11: 3.1311 L22: 2.4871 REMARK 3 L33: 2.7122 L12: -0.0021 REMARK 3 L13: 0.4143 L23: 0.4666 REMARK 3 S TENSOR REMARK 3 S11: 0.3037 S12: 0.3935 S13: -0.4884 REMARK 3 S21: 0.0816 S22: -0.1411 S23: -0.0827 REMARK 3 S31: 0.7337 S32: 0.2898 S33: -0.2240 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.4874 26.5732 -49.8069 REMARK 3 T TENSOR REMARK 3 T11: 0.4294 T22: 0.2866 REMARK 3 T33: 0.2827 T12: -0.0338 REMARK 3 T13: -0.0080 T23: -0.0865 REMARK 3 L TENSOR REMARK 3 L11: 6.8590 L22: 7.3427 REMARK 3 L33: 0.5994 L12: -3.9433 REMARK 3 L13: -0.3741 L23: -1.5010 REMARK 3 S TENSOR REMARK 3 S11: 0.6454 S12: 0.8170 S13: -0.6312 REMARK 3 S21: -0.9484 S22: -0.3118 S23: 0.0280 REMARK 3 S31: 0.7958 S32: -0.1724 S33: -0.2663 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.8666 40.2365 -46.4120 REMARK 3 T TENSOR REMARK 3 T11: 0.6289 T22: 0.3963 REMARK 3 T33: 0.1947 T12: -0.1179 REMARK 3 T13: 0.0063 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 7.4940 L22: 4.9724 REMARK 3 L33: 3.6758 L12: -2.9389 REMARK 3 L13: 1.9838 L23: 2.6881 REMARK 3 S TENSOR REMARK 3 S11: 0.1025 S12: 0.4107 S13: 0.6228 REMARK 3 S21: -0.0418 S22: 0.2193 S23: -0.5250 REMARK 3 S31: 0.0120 S32: -0.7872 S33: 0.3636 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 142 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9227 37.6790 -40.0737 REMARK 3 T TENSOR REMARK 3 T11: 0.3925 T22: 0.3824 REMARK 3 T33: 0.4105 T12: -0.1283 REMARK 3 T13: -0.0528 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.6160 L22: 1.5922 REMARK 3 L33: 0.2957 L12: 0.6495 REMARK 3 L13: 0.0570 L23: -0.3570 REMARK 3 S TENSOR REMARK 3 S11: -0.0787 S12: -0.0655 S13: 0.1856 REMARK 3 S21: 0.2813 S22: -0.2063 S23: -0.2110 REMARK 3 S31: -0.1188 S32: 0.1606 S33: 0.1665 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.9564 31.6985 -32.2777 REMARK 3 T TENSOR REMARK 3 T11: 0.4057 T22: 0.3755 REMARK 3 T33: 0.2743 T12: -0.0870 REMARK 3 T13: -0.0955 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 3.2678 L22: 1.9108 REMARK 3 L33: 6.3981 L12: 0.8636 REMARK 3 L13: -0.4763 L23: -1.8628 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: 0.1806 S13: 0.1053 REMARK 3 S21: 0.2407 S22: 0.5613 S23: 0.0840 REMARK 3 S31: -0.7666 S32: -0.6374 S33: -0.2822 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 195 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1073 26.8060 -28.4698 REMARK 3 T TENSOR REMARK 3 T11: 0.3818 T22: 0.5124 REMARK 3 T33: 0.4075 T12: -0.0830 REMARK 3 T13: -0.1037 T23: 0.1065 REMARK 3 L TENSOR REMARK 3 L11: 2.0105 L22: 2.7314 REMARK 3 L33: 0.9874 L12: 0.9654 REMARK 3 L13: 0.6785 L23: -0.2915 REMARK 3 S TENSOR REMARK 3 S11: 0.1050 S12: -0.2072 S13: -0.5107 REMARK 3 S21: 0.1979 S22: -0.2175 S23: -0.5249 REMARK 3 S31: -0.2673 S32: 0.9306 S33: 0.1753 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OFT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005739. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9-9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11089 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 35.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DTK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14-18% PEG MME 5K AND 0.1 M BIS TRIS REMARK 280 PROPANE PH 9-9.5. 2 UL HANGING DROPS WITH A 1:1 RATIO BETWEEN REMARK 280 PROTEIN AND RESERVOIR SOLUTION WERE EQUILIBRATED OVER 1 ML OF REMARK 280 RESERVOIR SOLUTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.73800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.36900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.05350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.68450 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 133.42250 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 106.73800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 53.36900 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.68450 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 80.05350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 133.42250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 23 REMARK 465 LYS B 23 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 216 HZ2 LYS A 218 1.55 REMARK 500 OD1 ASN B 32 HD22 ASN B 57 1.57 REMARK 500 OE1 GLU B 216 HZ2 LYS B 218 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 25 100.62 62.35 REMARK 500 ASN A 58 98.67 -160.56 REMARK 500 ALA A 69 -137.27 50.98 REMARK 500 VAL A 119 88.63 -69.92 REMARK 500 ASN A 146 6.51 -68.29 REMARK 500 GLU A 147 19.71 58.71 REMARK 500 SER A 155 8.98 -154.78 REMARK 500 ASP A 159 21.00 -147.24 REMARK 500 HIS A 182 44.71 -74.80 REMARK 500 TRP B 25 101.10 73.60 REMARK 500 ASN B 58 98.31 -162.94 REMARK 500 ALA B 69 -140.90 51.86 REMARK 500 SER B 155 7.73 -154.66 REMARK 500 ASP B 159 21.23 -147.94 REMARK 500 HIS B 182 46.47 -78.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DTK RELATED DB: PDB REMARK 900 5DTK CONTAINS THE WILDTYPE PROTEIN DBREF 5OFT A 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 DBREF 5OFT B 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 SEQADV 5OFT ALA A 206 UNP Q6XEC0 ARG 206 ENGINEERED MUTATION SEQADV 5OFT ALA B 206 UNP Q6XEC0 ARG 206 ENGINEERED MUTATION SEQRES 1 A 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 A 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 A 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 A 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 A 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 A 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 A 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 A 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 A 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 A 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 A 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 A 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 A 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 A 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 A 243 ILE ALA ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 A 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 A 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 A 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 A 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO SEQRES 1 B 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 B 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 B 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 B 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 B 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 B 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 B 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 B 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 B 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 B 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 B 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 B 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 B 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 B 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 B 243 ILE ALA ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 B 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 B 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 B 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 B 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO MODRES 5OFT KCX A 73 LYS MODIFIED RESIDUE MODRES 5OFT KCX B 73 LYS MODIFIED RESIDUE HET KCX A 73 12 HET KCX B 73 12 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID FORMUL 1 KCX 2(C7 H14 N2 O4) FORMUL 3 HOH *44(H2 O) HELIX 1 AA1 TRP A 31 GLU A 37 1 7 HELIX 2 AA2 ASN A 58 GLN A 64 1 7 HELIX 3 AA3 PRO A 68 THR A 71 5 4 HELIX 4 AA4 PHE A 72 LEU A 83 1 12 HELIX 5 AA5 ILE A 102 ASN A 106 5 5 HELIX 6 AA6 ASN A 110 TYR A 117 1 8 HELIX 7 AA7 VAL A 119 GLY A 131 1 13 HELIX 8 AA8 GLY A 131 PHE A 142 1 12 HELIX 9 AA9 SER A 155 GLY A 160 1 6 HELIX 10 AB1 SER A 165 HIS A 178 1 14 HELIX 11 AB2 SER A 184 MET A 195 1 12 HELIX 12 AB3 THR A 243 LEU A 247 5 5 HELIX 13 AB4 GLY A 248 GLU A 261 1 14 HELIX 14 AB5 TRP B 31 GLU B 37 1 7 HELIX 15 AB6 ASN B 58 GLN B 64 1 7 HELIX 16 AB7 PRO B 68 THR B 71 5 4 HELIX 17 AB8 PHE B 72 LEU B 83 1 12 HELIX 18 AB9 ILE B 102 ASN B 106 5 5 HELIX 19 AC1 ASN B 110 TYR B 117 1 8 HELIX 20 AC2 VAL B 119 GLY B 131 1 13 HELIX 21 AC3 GLY B 131 ASP B 143 1 13 HELIX 22 AC4 SER B 155 GLY B 160 1 6 HELIX 23 AC5 ALA B 166 HIS B 178 1 13 HELIX 24 AC6 SER B 184 MET B 195 1 12 HELIX 25 AC7 THR B 243 LEU B 247 5 5 HELIX 26 AC8 GLY B 248 GLU B 261 1 14 SHEET 1 AA1 7 GLN A 26 GLU A 27 0 SHEET 2 AA1 7 GLN A 53 THR A 56 1 O GLY A 54 N GLN A 26 SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N LEU A 46 O PHE A 55 SHEET 4 AA1 7 VAL A 232 ASP A 240 -1 O ASN A 238 N VAL A 43 SHEET 5 AA1 7 ILE A 219 GLU A 227 -1 N VAL A 226 O TRP A 233 SHEET 6 AA1 7 ILE A 204 SER A 212 -1 N ILE A 204 O GLU A 227 SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205 SHEET 1 AA2 7 GLN B 26 GLU B 27 0 SHEET 2 AA2 7 GLN B 53 THR B 56 1 O GLY B 54 N GLN B 26 SHEET 3 AA2 7 GLY B 42 ASN B 48 -1 N ASN B 48 O GLN B 53 SHEET 4 AA2 7 VAL B 232 ASP B 240 -1 O ASN B 238 N VAL B 43 SHEET 5 AA2 7 ILE B 219 GLU B 227 -1 N VAL B 226 O TRP B 233 SHEET 6 AA2 7 ILE B 204 SER B 212 -1 N ILE B 204 O GLU B 227 SHEET 7 AA2 7 LEU B 196 ALA B 199 -1 N GLU B 198 O ILE B 205 SHEET 1 AA3 2 ALA B 65 PHE B 66 0 SHEET 2 AA3 2 ILE B 164 SER B 165 -1 O ILE B 164 N PHE B 66 LINK C PHE A 72 N KCX A 73 1555 1555 1.33 LINK C KCX A 73 N ILE A 74 1555 1555 1.33 LINK C PHE B 72 N KCX B 73 1555 1555 1.33 LINK C KCX B 73 N ILE B 74 1555 1555 1.33 CISPEP 1 GLU A 216 PRO A 217 0 -2.02 CISPEP 2 GLU B 216 PRO B 217 0 -1.45 CRYST1 120.151 120.151 160.107 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008323 0.004805 0.000000 0.00000 SCALE2 0.000000 0.009610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006246 0.00000