data_5OGA # _entry.id 5OGA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5OGA pdb_00005oga 10.2210/pdb5oga/pdb WWPDB D_1200005574 ? ? BMRB 34162 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Structure of minimal i-motif domain' _pdbx_database_related.db_id 34162 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5OGA _pdbx_database_status.recvd_initial_deposition_date 2017-07-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mir, B.' 1 ? 'Serrano, I.' 2 ? 'Buitrago, D.' 3 ? 'Orozco, M.' 4 ? 'Escaja, N.' 5 ? 'Gonzalez, C.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 139 _citation.language ? _citation.page_first 13985 _citation.page_last 13988 _citation.title 'Prevalent Sequences in the Human Genome Can Form Mini i-Motif Structures at Physiological pH.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.7b07383 _citation.pdbx_database_id_PubMed 28933543 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mir, B.' 1 ? primary 'Serrano, I.' 2 ? primary 'Buitrago, D.' 3 ? primary 'Orozco, M.' 4 ? primary 'Escaja, N.' 5 ? primary 'Gonzalez, C.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*TP*(DCP)P*GP*TP*TP*CP*(DCP)P*GP*TP*TP*TP*TP*TP*CP*GP*TP*TP*CP*CP*GP*T)-3') ; _entity.formula_weight 6275.114 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(THM)(DNR)(DG)(DT)(DT)(DC)(DNR)(DG)(DT)(DT)(DT)(DT)(DT)(DC)(DG)(DT)(DT)(DC)(DC) (DG)(DT) ; _entity_poly.pdbx_seq_one_letter_code_can XCGTTCCGTTTTTCGTTCCGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THM n 1 2 DNR n 1 3 DG n 1 4 DT n 1 5 DT n 1 6 DC n 1 7 DNR n 1 8 DG n 1 9 DT n 1 10 DT n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DC n 1 15 DG n 1 16 DT n 1 17 DT n 1 18 DC n 1 19 DC n 1 20 DG n 1 21 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5OGA _struct_ref.pdbx_db_accession 5OGA _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5OGA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 21 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5OGA _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DNR 'DNA linking' n ;2'-DEOXY-N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; ? 'C9 H15 N3 O7 P 1' 308.205 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 THM 'DNA OH 5 prime terminus' . THYMIDINE ;DEOXYTHYMIDINE; 2'-DEOXYTHYMIDINE ; 'C10 H14 N2 O5' 242.229 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 1 1 '2D DQF-COSY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 278 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '10 mM NaPi' _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label LL3 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.5 mM LL3, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label LL3 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5OGA _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 5OGA _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5OGA _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria null # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 'chemical shift assignment' Sparky ? Goddard 3 processing TopSpin ? 'Bruker Biospin' 4 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 5 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OGA _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5OGA _struct.title 'Structure of minimal i-motif domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OGA _struct_keywords.text 'i-motif, DNA non-canonical structure, minor groove tetrad, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A THM 1 "O3'" ? ? ? 1_555 A DNR 2 P ? ? A THM 1 A DNR 2 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale2 covale both ? A DNR 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A DNR 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale3 covale both ? A DC 6 "O3'" ? ? ? 1_555 A DNR 7 P ? ? A DC 6 A DNR 7 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale4 covale both ? A DNR 7 "O3'" ? ? ? 1_555 A DG 8 P ? ? A DNR 7 A DG 8 1_555 ? ? ? ? ? ? ? 1.608 ? ? hydrog1 hydrog ? ? A DNR 2 N4 ? ? ? 1_555 A DT 13 O2 ? ? A DNR 2 A DT 13 1_555 ? ? ? ? ? ? 'DNR-DT MISPAIR' ? ? ? hydrog2 hydrog ? ? A DNR 2 N4 ? ? ? 1_555 A DC 19 O2 ? ? A DNR 2 A DC 19 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog3 hydrog ? ? A DNR 2 O2 ? ? ? 1_555 A DC 19 N4 ? ? A DNR 2 A DC 19 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DT 13 O2 ? ? A DG 3 A DT 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DT 13 N3 ? ? A DG 3 A DT 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 20 N3 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DG 20 N2 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog8 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 20 N1 ? ? A DC 6 A DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 20 O6 ? ? A DC 6 A DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 20 N2 ? ? A DC 6 A DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DNR 7 N4 ? ? ? 1_555 A DC 14 O2 ? ? A DNR 7 A DC 14 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog12 hydrog ? ? A DNR 7 O2 ? ? ? 1_555 A DC 14 N4 ? ? A DNR 7 A DC 14 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog13 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 15 N3 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog14 hydrog ? ? A DG 8 N3 ? ? ? 1_555 A DG 15 N2 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog15 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 18 N3 ? ? A DG 8 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 18 O2 ? ? A DG 8 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 18 N4 ? ? A DG 8 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 5OGA _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THM 1 1 1 THM THM A . n A 1 2 DNR 2 2 2 DNR DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DNR 7 7 7 DNR DC A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DT 13 13 13 DT DT A . n A 1 14 DC 14 14 14 DC DC A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DC 19 19 19 DC DC A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DT 21 21 21 DT DT A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 3720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-29 2 'Structure model' 1 1 2019-05-08 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' pdbx_nmr_software 3 2 'Structure model' pdbx_seq_map_depositor_info 4 3 'Structure model' chem_comp 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_database_status 7 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.type' 2 2 'Structure model' '_pdbx_nmr_software.name' 3 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 4 3 'Structure model' '_chem_comp.type' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 8 3 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component LL3 _pdbx_nmr_exptl_sample.concentration 0.5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling none # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO5'" A THM 1 ? ? OP1 A DT 10 ? ? 1.38 2 4 "HO5'" A THM 1 ? ? OP2 A DT 10 ? ? 1.35 3 9 "HO5'" A THM 1 ? ? OP1 A DT 10 ? ? 1.33 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.37 108.30 3.07 0.30 N 2 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.38 108.30 3.08 0.30 N 3 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 117.61 122.90 -5.29 0.60 N 4 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.28 108.30 1.98 0.30 N 5 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.25 122.90 -3.65 0.60 N 6 1 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.23 121.90 -4.67 0.70 N 7 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.46 108.30 2.16 0.30 N 8 1 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.11 108.30 2.81 0.30 N 9 1 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.08 122.90 -3.82 0.60 N 10 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.16 108.30 1.86 0.30 N 11 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.86 108.30 4.56 0.30 N 12 1 N3 A DT 11 ? ? C2 A DT 11 ? ? O2 A DT 11 ? ? 118.47 122.30 -3.83 0.60 N 13 1 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.91 122.90 -3.99 0.60 N 14 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.09 108.30 2.79 0.30 N 15 1 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.73 122.90 -4.17 0.60 N 16 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.10 108.30 2.80 0.30 N 17 1 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.06 118.90 4.16 0.60 N 18 1 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.82 121.90 -5.08 0.70 N 19 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.28 108.30 2.98 0.30 N 20 1 N1 A DG 15 ? ? C6 A DG 15 ? ? O6 A DG 15 ? ? 116.29 119.90 -3.61 0.60 N 21 1 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.52 108.30 3.22 0.30 N 22 1 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.96 122.90 -3.94 0.60 N 23 1 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.29 108.30 2.99 0.30 N 24 1 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.72 108.30 2.42 0.30 N 25 1 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.51 118.90 3.61 0.60 N 26 1 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.40 121.90 -4.50 0.70 N 27 1 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.28 108.30 1.98 0.30 N 28 1 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.61 118.90 3.71 0.60 N 29 1 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.97 121.90 -4.93 0.70 N 30 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.01 108.30 2.71 0.30 N 31 1 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.61 108.30 2.31 0.30 N 32 1 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 118.42 122.90 -4.48 0.60 N 33 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.05 108.30 2.75 0.30 N 34 2 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 117.60 122.90 -5.30 0.60 N 35 2 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.15 122.90 -3.75 0.60 N 36 2 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 116.85 121.90 -5.05 0.70 N 37 2 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.22 108.30 2.92 0.30 N 38 2 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.81 122.90 -4.09 0.60 N 39 2 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.34 108.30 2.04 0.30 N 40 2 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.45 122.90 -4.45 0.60 N 41 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.11 108.30 1.81 0.30 N 42 2 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.59 122.90 -4.31 0.60 N 43 2 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.87 122.90 -4.03 0.60 N 44 2 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.42 108.30 2.12 0.30 N 45 2 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 118.19 122.90 -4.71 0.60 N 46 2 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.10 118.90 4.20 0.60 N 47 2 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.73 121.90 -5.17 0.70 N 48 2 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.17 108.30 1.87 0.30 N 49 2 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.81 108.30 3.51 0.30 N 50 2 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.78 122.90 -4.12 0.60 N 51 2 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.45 108.30 3.15 0.30 N 52 2 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.27 122.90 -3.63 0.60 N 53 2 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.68 121.90 -4.22 0.70 N 54 2 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.72 118.90 3.82 0.60 N 55 2 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.86 121.90 -5.04 0.70 N 56 2 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.43 108.30 2.13 0.30 N 57 2 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.35 108.30 2.05 0.30 N 58 2 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 118.36 122.90 -4.54 0.60 N 59 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.08 108.30 2.78 0.30 N 60 3 C4 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 123.28 119.00 4.28 0.60 N 61 3 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 115.66 122.90 -7.24 0.60 N 62 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.44 108.30 3.14 0.30 N 63 3 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.67 118.90 3.77 0.60 N 64 3 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.02 121.90 -4.88 0.70 N 65 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.88 108.30 2.58 0.30 N 66 3 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.48 108.30 2.18 0.30 N 67 3 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.55 122.90 -4.35 0.60 N 68 3 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.96 108.30 3.66 0.30 N 69 3 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.06 122.90 -3.84 0.60 N 70 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.93 108.30 5.63 0.30 N 71 3 N3 A DT 11 ? ? C2 A DT 11 ? ? O2 A DT 11 ? ? 117.86 122.30 -4.44 0.60 N 72 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.61 108.30 2.31 0.30 N 73 3 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.19 108.30 2.89 0.30 N 74 3 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.09 118.90 4.19 0.60 N 75 3 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.66 121.90 -5.24 0.70 N 76 3 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.01 108.30 2.71 0.30 N 77 3 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.02 108.30 2.72 0.30 N 78 3 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.39 122.90 -4.51 0.60 N 79 3 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.30 108.30 2.00 0.30 N 80 3 N3 A DT 17 ? ? C2 A DT 17 ? ? O2 A DT 17 ? ? 118.60 122.30 -3.70 0.60 N 81 3 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 117.50 122.90 -5.40 0.60 N 82 3 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.13 118.90 4.23 0.60 N 83 3 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.54 121.90 -5.36 0.70 N 84 3 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.29 108.30 1.99 0.30 N 85 3 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 117.83 122.90 -5.07 0.60 N 86 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.07 108.30 2.77 0.30 N 87 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 117.85 122.90 -5.05 0.60 N 88 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.80 108.30 3.50 0.30 N 89 4 N3 A DT 5 ? ? C2 A DT 5 ? ? O2 A DT 5 ? ? 117.25 122.30 -5.05 0.60 N 90 4 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.13 121.90 -4.77 0.70 N 91 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.35 108.30 2.05 0.30 N 92 4 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.50 108.30 2.20 0.30 N 93 4 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.29 108.30 2.99 0.30 N 94 4 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.27 122.90 -3.63 0.60 N 95 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.07 108.30 2.77 0.30 N 96 4 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.12 122.90 -3.78 0.60 N 97 4 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.69 108.30 2.39 0.30 N 98 4 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.16 122.90 -3.74 0.60 N 99 4 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.17 108.30 2.87 0.30 N 100 4 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 122.85 118.90 3.95 0.60 N 101 4 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.76 121.90 -5.14 0.70 N 102 4 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.50 108.30 2.20 0.30 N 103 4 N1 A DG 15 ? ? C6 A DG 15 ? ? O6 A DG 15 ? ? 115.74 119.90 -4.16 0.60 N 104 4 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.21 108.30 2.91 0.30 N 105 4 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.52 122.90 -4.38 0.60 N 106 4 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 112.00 108.30 3.70 0.30 N 107 4 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.49 122.90 -4.41 0.60 N 108 4 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.41 108.30 2.11 0.30 N 109 4 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.64 121.90 -4.26 0.70 N 110 4 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.86 118.90 3.96 0.60 N 111 4 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.52 121.90 -5.38 0.70 N 112 4 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.79 108.30 2.49 0.30 N 113 4 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 119.03 122.90 -3.87 0.60 N 114 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.30 108.30 2.00 0.30 N 115 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.62 108.30 3.32 0.30 N 116 5 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.71 122.90 -4.19 0.60 N 117 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.46 108.30 2.16 0.30 N 118 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.24 108.30 1.94 0.30 N 119 5 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.98 122.90 -3.92 0.60 N 120 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 116.53 108.30 8.23 0.30 N 121 5 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 117.70 122.30 -4.60 0.60 N 122 5 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.35 122.90 -4.55 0.60 N 123 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 114.66 108.30 6.36 0.30 N 124 5 N3 A DT 11 ? ? C2 A DT 11 ? ? O2 A DT 11 ? ? 117.95 122.30 -4.35 0.60 N 125 5 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.39 122.90 -4.51 0.60 N 126 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.24 108.30 2.94 0.30 N 127 5 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.24 122.90 -3.66 0.60 N 128 5 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.71 108.30 2.41 0.30 N 129 5 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.09 118.90 4.19 0.60 N 130 5 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.69 121.90 -5.21 0.70 N 131 5 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.91 108.30 2.61 0.30 N 132 5 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.34 108.30 3.04 0.30 N 133 5 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.24 122.90 -4.66 0.60 N 134 5 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.86 122.90 -4.04 0.60 N 135 5 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.03 108.30 2.73 0.30 N 136 5 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.54 121.90 -4.36 0.70 N 137 5 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.41 118.90 4.51 0.60 N 138 5 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.47 121.90 -5.43 0.70 N 139 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.73 108.30 2.43 0.30 N 140 5 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.30 108.30 2.00 0.30 N 141 5 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 118.16 122.90 -4.74 0.60 N 142 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.15 108.30 1.85 0.30 N 143 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.69 108.30 2.39 0.30 N 144 6 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.15 122.90 -3.75 0.60 N 145 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.77 108.30 2.47 0.30 N 146 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.74 108.30 2.44 0.30 N 147 6 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.79 108.30 2.49 0.30 N 148 6 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.90 122.90 -5.00 0.60 N 149 6 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.58 108.30 2.28 0.30 N 150 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.98 108.30 2.68 0.30 N 151 6 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.11 122.90 -3.79 0.60 N 152 6 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.03 122.90 -3.87 0.60 N 153 6 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.68 108.30 2.38 0.30 N 154 6 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 122.82 118.90 3.92 0.60 N 155 6 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.80 121.90 -5.10 0.70 N 156 6 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.71 108.30 3.41 0.30 N 157 6 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.23 108.30 2.93 0.30 N 158 6 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.03 122.90 -3.87 0.60 N 159 6 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.27 108.30 1.97 0.30 N 160 6 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.67 118.90 3.77 0.60 N 161 6 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.25 121.90 -4.65 0.70 N 162 6 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.79 118.90 4.89 0.60 N 163 6 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.15 121.90 -5.75 0.70 N 164 6 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.47 108.30 2.17 0.30 N 165 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.73 108.30 2.43 0.30 N 166 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.14 108.30 2.84 0.30 N 167 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.53 122.90 -4.37 0.60 N 168 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.17 108.30 2.87 0.30 N 169 7 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.53 122.90 -4.37 0.60 N 170 7 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.30 121.90 -4.60 0.70 N 171 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.92 108.30 2.62 0.30 N 172 7 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.25 108.30 1.95 0.30 N 173 7 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.98 122.90 -4.92 0.60 N 174 7 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.52 108.30 3.22 0.30 N 175 7 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.18 122.90 -3.72 0.60 N 176 7 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.38 108.30 3.08 0.30 N 177 7 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.78 122.90 -4.12 0.60 N 178 7 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.61 108.30 3.31 0.30 N 179 7 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.23 122.90 -3.67 0.60 N 180 7 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.04 118.90 4.14 0.60 N 181 7 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.64 121.90 -5.26 0.70 N 182 7 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.09 108.30 2.79 0.30 N 183 7 N1 A DG 15 ? ? C6 A DG 15 ? ? O6 A DG 15 ? ? 116.16 119.90 -3.74 0.60 N 184 7 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.06 108.30 2.76 0.30 N 185 7 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.33 122.90 -4.57 0.60 N 186 7 "O4'" A DC 18 ? ? "C4'" A DC 18 ? ? "C3'" A DC 18 ? ? 109.78 106.00 3.78 0.60 N 187 7 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.22 121.90 -4.68 0.70 N 188 7 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.16 118.90 4.26 0.60 N 189 7 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.59 121.90 -5.31 0.70 N 190 7 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.48 108.30 2.18 0.30 N 191 7 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 118.82 122.90 -4.08 0.60 N 192 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.93 108.30 2.63 0.30 N 193 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.31 108.30 3.01 0.30 N 194 8 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 117.76 122.90 -5.14 0.60 N 195 8 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.24 122.90 -3.66 0.60 N 196 8 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.66 121.90 -4.24 0.70 N 197 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.47 108.30 2.17 0.30 N 198 8 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.94 108.30 2.64 0.30 N 199 8 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.75 122.90 -4.15 0.60 N 200 8 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 114.68 108.30 6.38 0.30 N 201 8 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 117.46 122.30 -4.84 0.60 N 202 8 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.28 122.90 -4.62 0.60 N 203 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.70 108.30 5.40 0.30 N 204 8 N3 A DT 11 ? ? C2 A DT 11 ? ? O2 A DT 11 ? ? 117.53 122.30 -4.77 0.60 N 205 8 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.29 122.90 -4.61 0.60 N 206 8 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.19 108.30 1.89 0.30 N 207 8 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.27 122.90 -3.63 0.60 N 208 8 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.90 108.30 2.60 0.30 N 209 8 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 122.67 118.90 3.77 0.60 N 210 8 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 117.34 121.90 -4.56 0.70 N 211 8 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.15 108.30 2.85 0.30 N 212 8 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.05 108.30 2.75 0.30 N 213 8 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.51 122.90 -4.39 0.60 N 214 8 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.13 122.90 -3.77 0.60 N 215 8 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.65 108.30 2.35 0.30 N 216 8 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.43 108.30 2.13 0.30 N 217 8 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.91 121.90 -4.99 0.70 N 218 8 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.48 108.30 2.18 0.30 N 219 8 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.93 108.30 2.63 0.30 N 220 8 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 117.59 122.90 -5.31 0.60 N 221 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.91 108.30 2.61 0.30 N 222 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.87 108.30 4.57 0.30 N 223 9 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.09 122.90 -4.81 0.60 N 224 9 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.38 108.30 4.08 0.30 N 225 9 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.23 122.90 -3.67 0.60 N 226 9 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 116.86 121.90 -5.04 0.70 N 227 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.09 108.30 2.79 0.30 N 228 9 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.42 108.30 2.12 0.30 N 229 9 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.09 122.90 -3.81 0.60 N 230 9 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.73 108.30 4.43 0.30 N 231 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? "C2'" A DT 11 ? ? 100.89 105.90 -5.01 0.80 N 232 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.54 108.30 5.24 0.30 N 233 9 N3 A DT 11 ? ? C2 A DT 11 ? ? O2 A DT 11 ? ? 118.42 122.30 -3.88 0.60 N 234 9 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.85 108.30 2.55 0.30 N 235 9 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.85 108.30 3.55 0.30 N 236 9 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 122.91 118.90 4.01 0.60 N 237 9 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.65 121.90 -5.25 0.70 N 238 9 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.87 108.30 3.57 0.30 N 239 9 N1 A DG 15 ? ? C6 A DG 15 ? ? O6 A DG 15 ? ? 115.74 119.90 -4.16 0.60 N 240 9 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.45 108.30 2.15 0.30 N 241 9 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.61 122.90 -4.29 0.60 N 242 9 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 112.20 108.30 3.90 0.30 N 243 9 N3 A DT 17 ? ? C2 A DT 17 ? ? O2 A DT 17 ? ? 118.64 122.30 -3.66 0.60 N 244 9 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.32 108.30 3.02 0.30 N 245 9 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.33 121.90 -4.57 0.70 N 246 9 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.94 121.90 -4.96 0.70 N 247 9 "C3'" A DC 19 ? ? "O3'" A DC 19 ? ? P A DG 20 ? ? 127.35 119.70 7.65 1.20 Y 248 9 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.35 108.30 2.05 0.30 N 249 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.94 108.30 2.64 0.30 N 250 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.73 108.30 3.43 0.30 N 251 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.85 122.90 -4.05 0.60 N 252 10 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.56 108.30 2.26 0.30 N 253 10 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.95 122.90 -3.95 0.60 N 254 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.13 108.30 2.83 0.30 N 255 10 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.31 122.90 -4.59 0.60 N 256 10 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.43 108.30 2.13 0.30 N 257 10 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.75 122.90 -4.15 0.60 N 258 10 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.50 108.30 2.20 0.30 N 259 10 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.37 108.30 2.07 0.30 N 260 10 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.58 122.90 -4.32 0.60 N 261 10 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.84 108.30 3.54 0.30 N 262 10 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.11 122.90 -3.79 0.60 N 263 10 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 122.88 118.90 3.98 0.60 N 264 10 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.73 121.90 -5.17 0.70 N 265 10 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.99 108.30 2.69 0.30 N 266 10 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.74 122.90 -4.16 0.60 N 267 10 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.44 108.30 2.14 0.30 N 268 10 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.54 118.90 3.64 0.60 N 269 10 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.56 121.90 -4.34 0.70 N 270 10 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.51 118.90 4.61 0.60 N 271 10 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.47 121.90 -5.43 0.70 N 272 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.49 108.30 2.19 0.30 N 273 10 "O4'" A DT 21 ? ? "C1'" A DT 21 ? ? N1 A DT 21 ? ? 110.85 108.30 2.55 0.30 N 274 10 C6 A DT 21 ? ? C5 A DT 21 ? ? C7 A DT 21 ? ? 118.86 122.90 -4.04 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 13 ? ? 0.055 'SIDE CHAIN' 2 1 DT A 16 ? ? 0.062 'SIDE CHAIN' 3 1 DC A 18 ? ? 0.080 'SIDE CHAIN' 4 2 DT A 13 ? ? 0.071 'SIDE CHAIN' 5 2 DT A 16 ? ? 0.070 'SIDE CHAIN' 6 3 DC A 18 ? ? 0.074 'SIDE CHAIN' 7 3 DC A 19 ? ? 0.058 'SIDE CHAIN' 8 4 DC A 18 ? ? 0.166 'SIDE CHAIN' 9 5 DC A 6 ? ? 0.109 'SIDE CHAIN' 10 5 DC A 18 ? ? 0.077 'SIDE CHAIN' 11 6 DC A 6 ? ? 0.093 'SIDE CHAIN' 12 6 DT A 11 ? ? 0.068 'SIDE CHAIN' 13 6 DC A 18 ? ? 0.101 'SIDE CHAIN' 14 7 DC A 18 ? ? 0.061 'SIDE CHAIN' 15 7 DC A 19 ? ? 0.058 'SIDE CHAIN' 16 8 DT A 13 ? ? 0.059 'SIDE CHAIN' 17 8 DC A 18 ? ? 0.142 'SIDE CHAIN' 18 9 DT A 10 ? ? 0.069 'SIDE CHAIN' 19 9 DT A 13 ? ? 0.073 'SIDE CHAIN' 20 9 DG A 20 ? ? 0.053 'SIDE CHAIN' 21 10 DT A 9 ? ? 0.097 'SIDE CHAIN' 22 10 DT A 16 ? ? 0.099 'SIDE CHAIN' 23 10 DC A 18 ? ? 0.068 'SIDE CHAIN' 24 10 DC A 19 ? ? 0.082 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5OGA 'double helix' 5OGA 'parallel strands' 5OGA 'bulge loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 13 1_555 A DG 3 1_555 2.544 -0.747 0.371 4.884 24.877 -1.884 1 A_DT13:DG3_A A 13 ? A 3 ? 28 1 1 A DC 19 1_555 A DNR 2 1_555 -2.000 -1.574 -0.002 -7.781 -11.592 -177.333 2 A_DC19:DNR2_A A 19 ? A 2 ? 15 2 1 A DC 14 1_555 A DNR 7 1_555 1.981 1.365 -0.217 -17.151 -12.546 179.247 3 A_DC14:DNR7_A A 14 ? A 7 ? 15 2 1 A DC 18 1_555 A DG 8 1_555 0.475 -0.210 0.410 -15.758 10.398 -1.637 4 A_DC18:DG8_A A 18 ? A 8 ? 19 1 1 A DC 6 1_555 A DG 20 1_555 0.481 -0.258 0.411 -5.259 10.381 -1.235 5 A_DC6:DG20_A A 6 ? A 20 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 13 1_555 A DG 3 1_555 A DC 19 1_555 A DNR 2 1_555 -4.514 -4.239 -1.981 42.241 151.649 -96.386 2.134 -2.275 2.001 -78.547 21.879 -165.003 1 AA_DT13DC19:DNR2DG3_AA A 13 ? A 3 ? A 19 ? A 2 ? 1 A DC 19 1_555 A DNR 2 1_555 A DC 14 1_555 A DNR 7 1_555 -2.960 -1.533 0.336 96.882 -147.498 123.125 -0.717 1.513 0.132 -73.927 -48.558 178.319 2 AA_DC19DC14:DNR7DNR2_AA A 19 ? A 2 ? A 14 ? A 7 ? 1 A DC 14 1_555 A DNR 7 1_555 A DC 18 1_555 A DG 8 1_555 0.913 -2.866 -4.177 -159.660 48.718 52.521 -0.752 1.796 -3.389 25.420 83.306 168.281 3 AA_DC14DC18:DG8DNR7_AA A 14 ? A 7 ? A 18 ? A 8 ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #