HEADER LYASE 17-JUL-17 5OHH TITLE CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE ISOZYME XIII WITH 2- TITLE 2 [(1S)-2,3-DIHYDRO-1H-INDEN-1-YLAMINO]-3,5,6-TRIFLUORO-4-[(2- TITLE 3 HYDROXYETHYL)THIO]BENZENESULFONAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 13; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: HUMAN CARBONIC ANHYDRASE XIII; COMPND 5 SYNONYM: CARBONATE DEHYDRATASE XIII,CARBONIC ANHYDRASE XIII,CA-XIII; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DRUG DESIGN, CARBONIC ANHYDRASE, BENZENESULFONAMIDE, METAL-BINDING, KEYWDS 2 LYASE-LYASE INHIBITOR COMPLEX, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SMIRNOV,E.MANAKOVA,S.GRAZULIS REVDAT 2 17-JAN-24 5OHH 1 REMARK LINK REVDAT 1 08-AUG-18 5OHH 0 JRNL AUTH A.SMIRNOV,E.MANAKOVA,S.GRAZULIS,D.MATULIS JRNL TITL CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE ISOZYME XIII JRNL TITL 2 WITH 2-[(1S)-2,3-DIHYDRO-1H-INDEN-1-YLAMINO]-3,5, JRNL TITL 3 6-TRIFLUORO-4-[(2-HYDROXYETHYL)THIO]BENZENESULFONAMIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 89004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 9977 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4115 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 150 REMARK 3 SOLVENT ATOMS : 699 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.063 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5OHH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99072 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 56.501 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 26.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.60 REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : 0.40900 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5LLN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION BUFFER: 0.1M SODIUM REMARK 280 CITRATE (PH 5.5), 0.1M SODIUM ACETATE (PH 4.5) AND 26% PEG4000, REMARK 280 EVAPORATION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.25050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.95450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.70950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.95450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.25050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.70950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 MET B 2 REMARK 465 SER B 3 REMARK 465 ARG B 4 REMARK 465 LEU B 5 REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 SER A 3 REMARK 465 ARG A 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 EDO B 307 O HOH B 401 1.77 REMARK 500 ND2 ASN B 219 O HOH B 402 1.82 REMARK 500 OG SER B 230 O HOH B 403 1.98 REMARK 500 OD1 ASP A 74 NH1 ARG A 93 1.98 REMARK 500 O HOH A 414 O HOH A 572 2.01 REMARK 500 OE1 GLU A 135 OE2 GLU A 139 2.06 REMARK 500 OD1 ASN B 69 O HOH B 404 2.09 REMARK 500 O HOH B 478 O HOH B 554 2.09 REMARK 500 O HOH A 550 O HOH A 618 2.13 REMARK 500 NZ LYS A 38 O HOH A 401 2.14 REMARK 500 O27 5DU B 313 O HOH B 405 2.14 REMARK 500 O ASP A 104 O HOH A 402 2.17 REMARK 500 OE2 GLU A 20 O HOH A 403 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP B 103 CG2 THR A 75 4545 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS B 105 CG HIS B 105 CD2 0.066 REMARK 500 HIS B 138 CG HIS B 138 CD2 0.067 REMARK 500 TYR A 53 CZ TYR A 53 CE2 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 67 -176.27 -173.03 REMARK 500 ASN B 77 45.41 -89.44 REMARK 500 ASN B 77 46.13 -89.44 REMARK 500 HIS B 105 81.74 -150.73 REMARK 500 ASN B 246 46.65 -155.18 REMARK 500 SER A 67 -176.64 -178.56 REMARK 500 ASN A 77 32.12 -94.58 REMARK 500 ASN A 246 45.93 -150.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 74 THR A 75 -149.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 744 DISTANCE = 6.62 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 96 NE2 REMARK 620 2 HIS B 98 NE2 99.9 REMARK 620 3 HIS B 121 ND1 113.0 91.9 REMARK 620 4 ACT B 311 O 89.7 170.1 86.5 REMARK 620 5 HOH B 423 O 106.0 89.8 140.0 85.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 96 NE2 REMARK 620 2 HIS A 98 NE2 99.2 REMARK 620 3 HIS A 121 ND1 111.6 92.4 REMARK 620 4 ACT A 307 OXT 90.3 169.9 87.1 REMARK 620 5 HOH A 427 O 108.8 91.0 138.4 82.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZI B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCN B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LCP B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5DU B 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OGJ RELATED DB: PDB REMARK 900 SAME MANUSCRIPT DBREF 5OHH B 2 263 UNP Q8N1Q1 CAH13_HUMAN 1 262 DBREF 5OHH A 2 263 UNP Q8N1Q1 CAH13_HUMAN 1 262 SEQADV 5OHH MET B 1 UNP Q8N1Q1 INITIATING METHIONINE SEQADV 5OHH MET A 1 UNP Q8N1Q1 INITIATING METHIONINE SEQRES 1 B 263 MET MET SER ARG LEU SER TRP GLY TYR ARG GLU HIS ASN SEQRES 2 B 263 GLY PRO ILE HIS TRP LYS GLU PHE PHE PRO ILE ALA ASP SEQRES 3 B 263 GLY ASP GLN GLN SER PRO ILE GLU ILE LYS THR LYS GLU SEQRES 4 B 263 VAL LYS TYR ASP SER SER LEU ARG PRO LEU SER ILE LYS SEQRES 5 B 263 TYR ASP PRO SER SER ALA LYS ILE ILE SER ASN SER GLY SEQRES 6 B 263 HIS SER PHE ASN VAL ASP PHE ASP ASP THR GLU ASN LYS SEQRES 7 B 263 SER VAL LEU ARG GLY GLY PRO LEU THR GLY SER TYR ARG SEQRES 8 B 263 LEU ARG GLN VAL HIS LEU HIS TRP GLY SER ALA ASP ASP SEQRES 9 B 263 HIS GLY SER GLU HIS ILE VAL ASP GLY VAL SER TYR ALA SEQRES 10 B 263 ALA GLU LEU HIS VAL VAL HIS TRP ASN SER ASP LYS TYR SEQRES 11 B 263 PRO SER PHE VAL GLU ALA ALA HIS GLU PRO ASP GLY LEU SEQRES 12 B 263 ALA VAL LEU GLY VAL PHE LEU GLN ILE GLY GLU PRO ASN SEQRES 13 B 263 SER GLN LEU GLN LYS ILE THR ASP THR LEU ASP SER ILE SEQRES 14 B 263 LYS GLU LYS GLY LYS GLN THR ARG PHE THR ASN PHE ASP SEQRES 15 B 263 LEU LEU SER LEU LEU PRO PRO SER TRP ASP TYR TRP THR SEQRES 16 B 263 TYR PRO GLY SER LEU THR VAL PRO PRO LEU LEU GLU SER SEQRES 17 B 263 VAL THR TRP ILE VAL LEU LYS GLN PRO ILE ASN ILE SER SEQRES 18 B 263 SER GLN GLN LEU ALA LYS PHE ARG SER LEU LEU CYS THR SEQRES 19 B 263 ALA GLU GLY GLU ALA ALA ALA PHE LEU VAL SER ASN HIS SEQRES 20 B 263 ARG PRO PRO GLN PRO LEU LYS GLY ARG LYS VAL ARG ALA SEQRES 21 B 263 SER PHE HIS SEQRES 1 A 263 MET MET SER ARG LEU SER TRP GLY TYR ARG GLU HIS ASN SEQRES 2 A 263 GLY PRO ILE HIS TRP LYS GLU PHE PHE PRO ILE ALA ASP SEQRES 3 A 263 GLY ASP GLN GLN SER PRO ILE GLU ILE LYS THR LYS GLU SEQRES 4 A 263 VAL LYS TYR ASP SER SER LEU ARG PRO LEU SER ILE LYS SEQRES 5 A 263 TYR ASP PRO SER SER ALA LYS ILE ILE SER ASN SER GLY SEQRES 6 A 263 HIS SER PHE ASN VAL ASP PHE ASP ASP THR GLU ASN LYS SEQRES 7 A 263 SER VAL LEU ARG GLY GLY PRO LEU THR GLY SER TYR ARG SEQRES 8 A 263 LEU ARG GLN VAL HIS LEU HIS TRP GLY SER ALA ASP ASP SEQRES 9 A 263 HIS GLY SER GLU HIS ILE VAL ASP GLY VAL SER TYR ALA SEQRES 10 A 263 ALA GLU LEU HIS VAL VAL HIS TRP ASN SER ASP LYS TYR SEQRES 11 A 263 PRO SER PHE VAL GLU ALA ALA HIS GLU PRO ASP GLY LEU SEQRES 12 A 263 ALA VAL LEU GLY VAL PHE LEU GLN ILE GLY GLU PRO ASN SEQRES 13 A 263 SER GLN LEU GLN LYS ILE THR ASP THR LEU ASP SER ILE SEQRES 14 A 263 LYS GLU LYS GLY LYS GLN THR ARG PHE THR ASN PHE ASP SEQRES 15 A 263 LEU LEU SER LEU LEU PRO PRO SER TRP ASP TYR TRP THR SEQRES 16 A 263 TYR PRO GLY SER LEU THR VAL PRO PRO LEU LEU GLU SER SEQRES 17 A 263 VAL THR TRP ILE VAL LEU LYS GLN PRO ILE ASN ILE SER SEQRES 18 A 263 SER GLN GLN LEU ALA LYS PHE ARG SER LEU LEU CYS THR SEQRES 19 A 263 ALA GLU GLY GLU ALA ALA ALA PHE LEU VAL SER ASN HIS SEQRES 20 A 263 ARG PRO PRO GLN PRO LEU LYS GLY ARG LYS VAL ARG ALA SEQRES 21 A 263 SER PHE HIS HET ZN B 301 1 HET CIT B 302 13 HET EDO B 303 4 HET EDO B 304 4 HET AZI B 305 3 HET BCN B 306 11 HET EDO B 307 4 HET EDO B 308 4 HET PEG B 309 7 HET LCP B 310 5 HET ACT B 311 4 HET CIT B 312 13 HET 5DU B 313 27 HET ZN A 301 1 HET PEG A 302 7 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET CIT A 306 13 HET ACT A 307 4 HET CIT A 308 13 HETNAM ZN ZINC ION HETNAM CIT CITRIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM AZI AZIDE ION HETNAM BCN BICINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM LCP PERCHLORATE ION HETNAM ACT ACETATE ION HETNAM 5DU 2-[(1S)-2,3-DIHYDRO-1H-INDEN-1-YLAMINO]-3,5,6- HETNAM 2 5DU TRIFLUORO-4-[(2-HYDROXYETHYL) HETNAM 3 5DU SULFANYL]BENZENESULFONAMIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 CIT 4(C6 H8 O7) FORMUL 5 EDO 7(C2 H6 O2) FORMUL 7 AZI N3 1- FORMUL 8 BCN C6 H13 N O4 FORMUL 11 PEG 2(C4 H10 O3) FORMUL 12 LCP CL O4 1- FORMUL 13 ACT 2(C2 H3 O2 1-) FORMUL 15 5DU C17 H17 F3 N2 O3 S2 FORMUL 24 HOH *699(H2 O) HELIX 1 AA1 GLY B 14 ILE B 16 5 3 HELIX 2 AA2 HIS B 17 PHE B 22 1 6 HELIX 3 AA3 PRO B 23 GLY B 27 5 5 HELIX 4 AA4 LYS B 36 VAL B 40 5 5 HELIX 5 AA5 SER B 132 ALA B 137 1 6 HELIX 6 AA6 ASN B 156 ASP B 164 1 9 HELIX 7 AA7 THR B 165 LYS B 170 5 6 HELIX 8 AA8 ASP B 182 LEU B 187 1 6 HELIX 9 AA9 SER B 221 ARG B 229 1 9 HELIX 10 AB1 GLY A 14 PHE A 21 5 8 HELIX 11 AB2 PHE A 22 GLY A 27 5 6 HELIX 12 AB3 LYS A 36 VAL A 40 5 5 HELIX 13 AB4 ASP A 54 SER A 56 5 3 HELIX 14 AB5 SER A 132 ALA A 137 1 6 HELIX 15 AB6 ASN A 156 GLN A 158 5 3 HELIX 16 AB7 LEU A 159 THR A 165 1 7 HELIX 17 AB8 LEU A 166 LYS A 170 5 5 HELIX 18 AB9 LEU A 183 LEU A 187 5 5 HELIX 19 AC1 SER A 221 ARG A 229 1 9 SHEET 1 AA1 2 GLU B 34 ILE B 35 0 SHEET 2 AA1 2 ILE B 110 VAL B 111 1 O ILE B 110 N ILE B 35 SHEET 1 AA210 LYS B 41 TYR B 42 0 SHEET 2 AA210 ARG B 259 ALA B 260 1 O ALA B 260 N LYS B 41 SHEET 3 AA210 TYR B 193 GLY B 198 -1 N THR B 195 O ARG B 259 SHEET 4 AA210 VAL B 209 LEU B 214 -1 O VAL B 209 N GLY B 198 SHEET 5 AA210 LEU B 143 ILE B 152 1 N GLY B 147 O LEU B 214 SHEET 6 AA210 ALA B 118 ASN B 126 -1 N LEU B 120 O VAL B 148 SHEET 7 AA210 TYR B 90 TRP B 99 -1 N GLN B 94 O VAL B 123 SHEET 8 AA210 PHE B 68 PHE B 72 -1 N VAL B 70 O VAL B 95 SHEET 9 AA210 ALA B 58 ASN B 63 -1 N LYS B 59 O ASP B 71 SHEET 10 AA210 GLN B 175 ARG B 177 -1 O THR B 176 N ILE B 61 SHEET 1 AA3 6 LEU B 49 LYS B 52 0 SHEET 2 AA3 6 VAL B 80 GLY B 83 -1 O ARG B 82 N SER B 50 SHEET 3 AA3 6 TYR B 90 TRP B 99 -1 O TYR B 90 N LEU B 81 SHEET 4 AA3 6 ALA B 118 ASN B 126 -1 O VAL B 123 N GLN B 94 SHEET 5 AA3 6 LEU B 143 ILE B 152 -1 O VAL B 148 N LEU B 120 SHEET 6 AA3 6 ILE B 218 ILE B 220 1 O ILE B 218 N GLN B 151 SHEET 1 AA4 2 GLU A 34 ILE A 35 0 SHEET 2 AA4 2 ILE A 110 VAL A 111 1 O ILE A 110 N ILE A 35 SHEET 1 AA510 LYS A 41 TYR A 42 0 SHEET 2 AA510 ARG A 259 ALA A 260 1 O ALA A 260 N LYS A 41 SHEET 3 AA510 TYR A 193 GLY A 198 -1 N THR A 195 O ARG A 259 SHEET 4 AA510 VAL A 209 LEU A 214 -1 O VAL A 209 N GLY A 198 SHEET 5 AA510 LEU A 143 ILE A 152 1 N GLY A 147 O LEU A 214 SHEET 6 AA510 ALA A 118 ASN A 126 -1 N LEU A 120 O VAL A 148 SHEET 7 AA510 TYR A 90 TRP A 99 -1 N ARG A 91 O TRP A 125 SHEET 8 AA510 PHE A 68 PHE A 72 -1 N VAL A 70 O VAL A 95 SHEET 9 AA510 ALA A 58 ASN A 63 -1 N LYS A 59 O ASP A 71 SHEET 10 AA510 GLN A 175 ARG A 177 -1 O THR A 176 N ILE A 61 SHEET 1 AA6 6 ARG A 47 LYS A 52 0 SHEET 2 AA6 6 VAL A 80 GLY A 84 -1 O ARG A 82 N SER A 50 SHEET 3 AA6 6 TYR A 90 TRP A 99 -1 O TYR A 90 N LEU A 81 SHEET 4 AA6 6 ALA A 118 ASN A 126 -1 O TRP A 125 N ARG A 91 SHEET 5 AA6 6 LEU A 143 ILE A 152 -1 O VAL A 148 N LEU A 120 SHEET 6 AA6 6 ILE A 218 ILE A 220 1 O ILE A 218 N GLN A 151 LINK NE2 HIS B 96 ZN ZN B 301 1555 1555 2.00 LINK NE2 HIS B 98 ZN ZN B 301 1555 1555 2.09 LINK ND1 HIS B 121 ZN ZN B 301 1555 1555 2.09 LINK ZN ZN B 301 O ACT B 311 1555 1555 2.11 LINK ZN ZN B 301 O HOH B 423 1555 1555 2.07 LINK NE2 HIS A 96 ZN ZN A 301 1555 1555 2.03 LINK NE2 HIS A 98 ZN ZN A 301 1555 1555 2.09 LINK ND1 HIS A 121 ZN ZN A 301 1555 1555 2.05 LINK ZN ZN A 301 OXT ACT A 307 1555 1555 2.20 LINK ZN ZN A 301 O HOH A 427 1555 1555 2.08 CISPEP 1 SER B 31 PRO B 32 0 -3.60 CISPEP 2 PRO B 203 PRO B 204 0 13.64 CISPEP 3 SER A 31 PRO A 32 0 -0.03 CISPEP 4 PRO A 203 PRO A 204 0 15.12 SITE 1 AC1 6 HIS B 96 HIS B 98 HIS B 121 THR B 201 SITE 2 AC1 6 ACT B 311 HOH B 423 SITE 1 AC2 8 HOH A 463 GLY B 100 SER B 101 HIS B 105 SITE 2 AC2 8 SER B 245 HIS B 247 HOH B 562 HOH B 578 SITE 1 AC3 7 GLN B 160 GLN B 223 LYS B 227 HOH B 418 SITE 2 AC3 7 HOH B 429 HOH B 431 HOH B 463 SITE 1 AC4 6 ARG A 82 HOH A 520 PRO B 189 SER B 190 SITE 2 AC4 6 HOH B 439 HOH B 518 SITE 1 AC5 9 HIS B 66 HIS B 96 HIS B 98 VAL B 202 SITE 2 AC5 9 5DU B 313 HOH B 405 HOH B 406 HOH B 423 SITE 3 AC5 9 HOH B 491 SITE 1 AC6 7 TYR A 42 HIS A 263 TYR B 42 ASP B 43 SITE 2 AC6 7 SER B 44 HIS B 263 HOH B 514 SITE 1 AC7 6 THR A 75 GLU A 76 ASP B 103 ILE B 152 SITE 2 AC7 6 HOH B 401 HOH B 420 SITE 1 AC8 6 THR A 75 SER B 222 GLN B 223 HOH B 487 SITE 2 AC8 6 HOH B 501 HOH B 503 SITE 1 AC9 10 LYS B 36 GLU B 39 LEU B 253 LCP B 310 SITE 2 AC9 10 HOH B 435 HOH B 459 HOH B 472 HOH B 530 SITE 3 AC9 10 HOH B 565 HOH B 700 SITE 1 AD1 4 LYS B 36 GLN B 223 PEG B 309 HOH B 549 SITE 1 AD2 8 HIS B 96 HIS B 121 VAL B 145 LEU B 200 SITE 2 AD2 8 THR B 201 ZN B 301 5DU B 313 HOH B 423 SITE 1 AD3 5 SER B 6 ARG B 10 GLU B 11 HIS B 12 SITE 2 AD3 5 ASN B 13 SITE 1 AD4 11 LYS A 257 ARG B 93 GLN B 94 HIS B 96 SITE 2 AD4 11 VAL B 123 PHE B 133 VAL B 202 PRO B 204 SITE 3 AD4 11 AZI B 305 ACT B 311 HOH B 405 SITE 1 AD5 6 HIS A 96 HIS A 98 HIS A 121 THR A 201 SITE 2 AD5 6 ACT A 307 HOH A 427 SITE 1 AD6 7 ASP A 28 GLN A 29 LYS A 254 ARG A 256 SITE 2 AD6 7 LYS B 59 ILE B 60 ARG B 177 SITE 1 AD7 9 ILE A 16 LYS A 19 ALA A 25 ASP A 26 SITE 2 AD7 9 GLU A 154 GLN A 251 HOH A 424 HOH A 494 SITE 3 AD7 9 HOH A 503 SITE 1 AD8 7 ASP A 43 SER A 45 LEU A 46 GLY A 84 SITE 2 AD8 7 ARG A 259 HOH A 571 HOH A 651 SITE 1 AD9 6 ASP A 103 ASP A 104 ILE A 152 HOH A 419 SITE 2 AD9 6 HOH A 451 GLU B 76 SITE 1 AE1 9 GLY A 100 SER A 101 HIS A 105 SER A 245 SITE 2 AE1 9 HIS A 247 HOH A 518 HOH A 596 HOH A 638 SITE 3 AE1 9 HOH A 658 SITE 1 AE2 7 HIS A 96 HIS A 121 VAL A 145 LEU A 200 SITE 2 AE2 7 THR A 201 ZN A 301 HOH A 427 SITE 1 AE3 4 ARG A 10 GLU A 11 HIS A 12 ASN A 13 CRYST1 56.501 57.419 159.909 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017699 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017416 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006254 0.00000