HEADER TRANSCRIPTION 17-JUL-17 5OHQ TITLE CRYSTAL STRUCTURE OF THE KOW6-KOW7 DOMAIN OF HUMAN DSIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSPT5,DRB SENSITIVITY-INDUCING FACTOR 160 KDA SUBUNIT,DSIF COMPND 5 P160,DRB SENSITIVITY-INDUCING FACTOR LARGE SUBUNIT,DSIF LARGE COMPND 6 SUBUNIT,TAT-COTRANSACTIVATOR 1 PROTEIN,TAT-CT1 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUPT5H, SPT5, SPT5H; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: RIL KEYWDS RNA POLYMERASE II, TRANSCRIPTION ELONGATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.BERNECKY,J.M.PLITZKO,P.CRAMER REVDAT 5 08-MAY-24 5OHQ 1 REMARK REVDAT 4 06-NOV-19 5OHQ 1 REMARK REVDAT 3 18-OCT-17 5OHQ 1 JRNL REVDAT 2 20-SEP-17 5OHQ 1 JRNL REVDAT 1 13-SEP-17 5OHQ 0 JRNL AUTH C.BERNECKY,J.M.PLITZKO,P.CRAMER JRNL TITL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II-DSIF COMPLEX JRNL TITL 2 REVEALS A MULTIDENTATE DNA-RNA CLAMP. JRNL REF NAT. STRUCT. MOL. BIOL. V. 24 809 2017 JRNL REFN ESSN 1545-9985 JRNL PMID 28892040 JRNL DOI 10.1038/NSMB.3465 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 93224 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.123 REMARK 3 R VALUE (WORKING SET) : 0.122 REMARK 3 FREE R VALUE : 0.140 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 4760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4215 - 3.4098 0.99 3199 160 0.1482 0.1643 REMARK 3 2 3.4098 - 2.7065 1.00 3195 189 0.1393 0.1533 REMARK 3 3 2.7065 - 2.3644 1.00 3255 160 0.1390 0.1434 REMARK 3 4 2.3644 - 2.1482 1.00 3179 201 0.1114 0.1231 REMARK 3 5 2.1482 - 1.9943 1.00 3213 177 0.1083 0.1200 REMARK 3 6 1.9943 - 1.8767 0.99 3219 152 0.1108 0.1203 REMARK 3 7 1.8767 - 1.7827 1.00 3237 156 0.1144 0.1303 REMARK 3 8 1.7827 - 1.7051 1.00 3179 189 0.1151 0.1453 REMARK 3 9 1.7051 - 1.6394 1.00 3234 164 0.1047 0.1213 REMARK 3 10 1.6394 - 1.5829 1.00 3228 164 0.0986 0.1172 REMARK 3 11 1.5829 - 1.5334 1.00 3167 188 0.0888 0.1187 REMARK 3 12 1.5334 - 1.4895 1.00 3246 143 0.0931 0.1214 REMARK 3 13 1.4895 - 1.4503 1.00 3254 147 0.0979 0.1266 REMARK 3 14 1.4503 - 1.4149 0.99 3226 156 0.0971 0.1130 REMARK 3 15 1.4149 - 1.3828 1.00 3202 172 0.0958 0.1425 REMARK 3 16 1.3828 - 1.3533 1.00 3192 166 0.0990 0.1160 REMARK 3 17 1.3533 - 1.3263 1.00 3235 192 0.1004 0.1299 REMARK 3 18 1.3263 - 1.3012 1.00 3202 147 0.1029 0.1185 REMARK 3 19 1.3012 - 1.2780 1.00 3194 232 0.1104 0.1274 REMARK 3 20 1.2780 - 1.2563 1.00 3216 157 0.1018 0.1427 REMARK 3 21 1.2563 - 1.2361 1.00 3207 175 0.1059 0.1630 REMARK 3 22 1.2361 - 1.2170 1.00 3216 171 0.1159 0.1446 REMARK 3 23 1.2170 - 1.1991 0.95 3044 174 0.1195 0.1546 REMARK 3 24 1.1991 - 1.1822 0.90 2875 144 0.1294 0.1598 REMARK 3 25 1.1822 - 1.1663 0.83 2651 175 0.1253 0.1561 REMARK 3 26 1.1663 - 1.1511 0.78 2571 120 0.1354 0.1419 REMARK 3 27 1.1511 - 1.1367 0.67 2125 129 0.1422 0.1405 REMARK 3 28 1.1367 - 1.1230 0.56 1798 106 0.1484 0.2081 REMARK 3 29 1.1230 - 1.1100 0.47 1530 87 0.1728 0.2158 REMARK 3 30 1.1100 - 1.0975 0.38 1175 67 0.2085 0.2059 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1015 REMARK 3 ANGLE : 1.163 1413 REMARK 3 CHIRALITY : 0.092 179 REMARK 3 PLANARITY : 0.006 180 REMARK 3 DIHEDRAL : 20.082 422 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OHQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005836. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999987357022 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93250 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.098 REMARK 200 RESOLUTION RANGE LOW (A) : 48.375 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 6.163 REMARK 200 R MERGE (I) : 0.03200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.74 REMARK 200 R MERGE FOR SHELL (I) : 0.16300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE PH 7, 3 M REMARK 280 SODIUM FORMATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.37450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.37450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 17.54550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.82850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 17.54550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.82850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.37450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 17.54550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.82850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.37450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 17.54550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.82850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1386 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1087 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1201 O HOH A 1378 1.78 REMARK 500 O HOH A 1314 O HOH A 1338 1.87 REMARK 500 O HOH A 1286 O HOH A 1378 1.95 REMARK 500 O HOH A 1398 O HOH A 1417 2.01 REMARK 500 O HOH A 1225 O HOH A 1278 2.04 REMARK 500 O HOH A 1396 O HOH A 1414 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1347 O HOH A 1421 4555 1.90 REMARK 500 O HOH A 1368 O HOH A 1368 4555 1.90 REMARK 500 O HOH A 1208 O HOH A 1208 4555 2.05 REMARK 500 O HOH A 1429 O HOH A 1433 4555 2.13 REMARK 500 O HOH A 1264 O HOH A 1394 8455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1049 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1038 -3.23 80.95 REMARK 500 GLU A1050 -14.03 86.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1430 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1431 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A1432 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A1433 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A1434 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1435 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A1436 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH A1437 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH A1438 DISTANCE = 7.10 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1102 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A1026 OG REMARK 620 2 SER A1027 OG 110.1 REMARK 620 3 GLU A1028 OE2 81.1 128.7 REMARK 620 4 HOH A1208 O 163.8 54.5 112.0 REMARK 620 5 HOH A1208 O 148.8 96.7 69.5 47.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-3815 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3816 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3817 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3818 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3819 RELATED DB: EMDB REMARK 900 RELATED ID: 5OHO RELATED DB: PDB REMARK 900 RELATED ID: 50IK RELATED DB: PDB DBREF 5OHQ A 979 1087 UNP O00267 SPT5H_HUMAN 979 1087 SEQADV 5OHQ GLY A 977 UNP O00267 EXPRESSION TAG SEQADV 5OHQ PRO A 978 UNP O00267 EXPRESSION TAG SEQRES 1 A 111 GLY PRO TRP VAL THR THR ASP ILE GLN VAL LYS VAL ARG SEQRES 2 A 111 ASP THR TYR LEU ASP THR GLN VAL VAL GLY GLN THR GLY SEQRES 3 A 111 VAL ILE ARG SER VAL THR GLY GLY MET CYS SER VAL TYR SEQRES 4 A 111 LEU LYS ASP SER GLU LYS VAL VAL SER ILE SER SER GLU SEQRES 5 A 111 HIS LEU GLU PRO ILE THR PRO THR LYS ASN ASN LYS VAL SEQRES 6 A 111 LYS VAL ILE LEU GLY GLU ASP ARG GLU ALA THR GLY VAL SEQRES 7 A 111 LEU LEU SER ILE ASP GLY GLU ASP GLY ILE VAL ARG MET SEQRES 8 A 111 ASP LEU ASP GLU GLN LEU LYS ILE LEU ASN LEU ARG PHE SEQRES 9 A 111 LEU GLY LYS LEU LEU GLU ALA HET CL A1101 1 HET NA A1102 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 CL CL 1- FORMUL 3 NA NA 1+ FORMUL 4 HOH *238(H2 O) SHEET 1 AA1 5 LYS A1021 SER A1026 0 SHEET 2 AA1 5 MET A1011 LEU A1016 -1 N LEU A1016 O LYS A1021 SHEET 3 AA1 5 THR A1001 THR A1008 -1 N ARG A1005 O SER A1013 SHEET 4 AA1 5 GLN A 985 VAL A 988 -1 N VAL A 986 O GLY A1002 SHEET 5 AA1 5 LEU A1030 PRO A1032 -1 O GLU A1031 N LYS A 987 SHEET 1 AA2 5 LEU A1073 ASN A1077 0 SHEET 2 AA2 5 ASP A1062 MET A1067 -1 N GLY A1063 O LEU A1076 SHEET 3 AA2 5 THR A1052 ASP A1059 -1 N ASP A1059 O ASP A1062 SHEET 4 AA2 5 LYS A1040 VAL A1043 -1 N VAL A1041 O GLY A1053 SHEET 5 AA2 5 LEU A1081 LYS A1083 -1 O GLY A1082 N LYS A1042 LINK OG BSER A1026 NA NA A1102 1555 1555 2.58 LINK OG ASER A1027 NA NA A1102 1555 1555 2.80 LINK OE2AGLU A1028 NA NA A1102 1555 1555 2.89 LINK NA NA A1102 O HOH A1208 1555 1555 2.77 LINK NA NA A1102 O HOH A1208 1555 4555 2.17 SITE 1 AC1 3 GLY A 977 SER A1026 HIS A1029 SITE 1 AC2 5 GLY A1010 SER A1026 SER A1027 GLU A1028 SITE 2 AC2 5 HOH A1208 CRYST1 35.091 75.657 96.749 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028497 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013218 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010336 0.00000