data_5OJT # _entry.id 5OJT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5OJT pdb_00005ojt 10.2210/pdb5ojt/pdb WWPDB D_1200005934 ? ? BMRB 34165 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details ;Structure-Activity Relationships and Biological Characterization of a Novel, Potent and Serum Stable C-X-C chemokine receptor type 4 (CXCR4) Antagonist ; _pdbx_database_related.db_id 34165 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5OJT _pdbx_database_status.recvd_initial_deposition_date 2017-07-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Brancaccio, D.' 1 ? 'Carotenuto, A.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 9641 _citation.page_last 9652 _citation.title ;Structure-Activity Relationships and Biological Characterization of a Novel, Potent, and Serum Stable C-X-C Chemokine Receptor Type 4 (CXCR4) Antagonist. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.7b01062 _citation.pdbx_database_id_PubMed 29125295 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Di Maro, S.' 1 ? primary 'Di Leva, F.S.' 2 ? primary 'Trotta, A.M.' 3 ? primary 'Brancaccio, D.' 4 ? primary 'Portella, L.' 5 ? primary 'Aurilio, M.' 6 ? primary 'Tomassi, S.' 7 ? primary 'Messere, A.' 8 ? primary 'Sementa, D.' 9 ? primary 'Lastoria, S.' 10 ? primary 'Carotenuto, A.' 11 ? primary 'Novellino, E.' 12 ? primary 'Scala, S.' 13 ? primary 'Marinelli, L.' 14 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'ACE-ARG-ALA-(D)CYS-ARG-BNA-HIS-PEN' _entity.formula_weight 999.237 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)RA(DCY)R(NAL)H(LE1)' _entity_poly.pdbx_seq_one_letter_code_can XRACRAHX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ARG n 1 3 ALA n 1 4 DCY n 1 5 ARG n 1 6 NAL n 1 7 HIS n 1 8 LE1 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5OJT _struct_ref.pdbx_db_accession 5OJT _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5OJT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5OJT _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LE1 'L-peptide linking' n 3-sulfanyl-L-valine 'L-LE1ICILLAMINE; L-Penicillamine' 'C5 H11 N O2 S' 149.211 NAL 'L-peptide linking' n 'BETA-(2-NAPHTHYL)-ALANINE' ? 'C13 H13 N O2' 215.248 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D DQF-COSY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2 mM NA Peptide, 200 mM [U-99% 2H] SDS, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 1H_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5OJT _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # _pdbx_nmr_ensemble.entry_id 5OJT _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5OJT _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' XEASY ? 'Bartels et al.' 2 'structure calculation' DYANA ? 'Guntert, Braun and Wuthrich' 3 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 4 collection VNMR ? Varian # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OJT _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5OJT _struct.title ;Structure-Activity Relationships and Biological Characterization of a Novel, Potent and Serum Stable C-X-C chemokine receptor type 4 (CXCR4) Antagonist ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OJT _struct_keywords.text 'CXCR4, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A DCY 4 SG ? ? ? 1_555 A LE1 8 SG ? ? A DCY 4 A LE1 8 1_555 ? ? ? ? ? ? ? 1.998 ? ? covale1 covale both ? A ACE 1 C ? ? ? 1_555 A ARG 2 N ? ? A ACE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A ALA 3 C ? ? ? 1_555 A DCY 4 N ? ? A ALA 3 A DCY 4 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale3 covale both ? A DCY 4 C ? ? ? 1_555 A ARG 5 N ? ? A DCY 4 A ARG 5 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale4 covale both ? A ARG 5 C ? ? ? 1_555 A NAL 6 N ? ? A ARG 5 A NAL 6 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale5 covale both ? A NAL 6 C ? ? ? 1_555 A HIS 7 N ? ? A NAL 6 A HIS 7 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale6 covale both ? A HIS 7 C ? ? ? 1_555 A LE1 8 N ? ? A HIS 7 A LE1 8 1_555 ? ? ? ? ? ? ? 1.349 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _atom_sites.entry_id 5OJT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1 1 ACE ACE A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 DCY 4 4 4 DCY CYS A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 NAL 6 6 6 NAL BNA A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 LE1 8 8 8 LE1 PEN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 490 ? 1 MORE 1 ? 1 'SSA (A^2)' 990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-22 2 'Structure model' 1 1 2017-12-27 3 'Structure model' 1 2 2022-05-04 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 4 'Structure model' atom_site 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_chem_comp.pdbx_synonyms' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' 8 3 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_atom_site.auth_atom_id' 10 4 'Structure model' '_atom_site.label_atom_id' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 Peptide 2 ? mM NA 1 SDS 200 ? mM '[U-99% 2H]' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.51 120.30 3.21 0.50 N 2 1 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.14 120.30 3.84 0.50 N 3 1 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.27 111.50 8.77 1.30 N 4 2 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.59 120.30 3.29 0.50 N 5 2 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.13 120.30 3.83 0.50 N 6 2 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.21 111.50 8.71 1.30 N 7 3 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.64 120.30 3.34 0.50 N 8 3 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.07 120.30 3.77 0.50 N 9 3 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.20 111.50 8.70 1.30 N 10 4 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.37 120.30 3.07 0.50 N 11 4 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.06 120.30 3.76 0.50 N 12 4 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.35 111.50 8.85 1.30 N 13 5 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 124.00 120.30 3.70 0.50 N 14 5 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.21 120.30 3.91 0.50 N 15 5 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.01 111.50 8.51 1.30 N 16 6 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.66 120.30 3.36 0.50 N 17 6 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.10 120.30 3.80 0.50 N 18 6 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.26 111.50 8.76 1.30 N 19 7 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.66 120.30 3.36 0.50 N 20 7 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 123.49 120.30 3.19 0.50 N 21 7 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.34 111.50 8.84 1.30 N 22 8 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.59 120.30 3.29 0.50 N 23 8 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.06 120.30 3.76 0.50 N 24 8 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.32 111.50 8.82 1.30 N 25 9 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.61 120.30 3.31 0.50 N 26 9 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 124.06 120.30 3.76 0.50 N 27 9 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.24 111.50 8.74 1.30 N 28 10 NE A ARG 2 ? ? CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 123.58 120.30 3.28 0.50 N 29 10 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH2 A ARG 5 ? ? 123.54 120.30 3.24 0.50 N 30 10 ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? NE2 A HIS 7 ? ? 120.44 111.50 8.94 1.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 5 ? ? -146.81 -56.47 2 1 NAL A 6 ? ? -103.87 -65.50 3 2 ARG A 5 ? ? -148.46 -57.49 4 2 NAL A 6 ? ? -104.09 -69.49 5 3 ARG A 5 ? ? -148.66 -57.33 6 3 NAL A 6 ? ? -103.70 -69.99 7 4 ARG A 5 ? ? -146.63 -56.25 8 4 NAL A 6 ? ? -104.86 -65.28 9 5 ARG A 5 ? ? -149.25 -56.92 10 5 NAL A 6 ? ? -104.43 -66.31 11 6 ARG A 5 ? ? -149.13 -56.97 12 6 NAL A 6 ? ? -105.51 -65.75 13 7 ARG A 5 ? ? -146.19 -59.23 14 7 NAL A 6 ? ? -103.90 -70.85 15 8 ARG A 5 ? ? -146.67 -58.14 16 8 NAL A 6 ? ? -102.33 -65.87 17 9 ARG A 5 ? ? -149.41 -56.81 18 9 NAL A 6 ? ? -103.92 -70.69 19 10 ARG A 5 ? ? -145.91 -57.27 20 10 NAL A 6 ? ? -105.42 -65.25 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 DCY N N N N 48 DCY CA C N S 49 DCY C C N N 50 DCY O O N N 51 DCY CB C N N 52 DCY SG S N N 53 DCY OXT O N N 54 DCY H H N N 55 DCY H2 H N N 56 DCY HA H N N 57 DCY HB2 H N N 58 DCY HB3 H N N 59 DCY HG H N N 60 DCY HXT H N N 61 HIS N N N N 62 HIS CA C N S 63 HIS C C N N 64 HIS O O N N 65 HIS CB C N N 66 HIS CG C Y N 67 HIS ND1 N Y N 68 HIS CD2 C Y N 69 HIS CE1 C Y N 70 HIS NE2 N Y N 71 HIS OXT O N N 72 HIS H H N N 73 HIS H2 H N N 74 HIS HA H N N 75 HIS HB2 H N N 76 HIS HB3 H N N 77 HIS HD1 H N N 78 HIS HD2 H N N 79 HIS HE1 H N N 80 HIS HE2 H N N 81 HIS HXT H N N 82 LE1 O O N N 83 LE1 C C N N 84 LE1 CA C N R 85 LE1 N N N N 86 LE1 CB C N N 87 LE1 C9 C N N 88 LE1 C8 C N N 89 LE1 SG S N N 90 LE1 OXT O N N 91 LE1 HA H N N 92 LE1 H H N N 93 LE1 H2 H N N 94 LE1 H9 H N N 95 LE1 H9A H N N 96 LE1 H9B H N N 97 LE1 H8 H N N 98 LE1 H8A H N N 99 LE1 H8B H N N 100 LE1 HSG H N N 101 LE1 HXT H N N 102 NAL C1 C Y N 103 NAL C2 C Y N 104 NAL C3 C Y N 105 NAL C4 C Y N 106 NAL C4A C Y N 107 NAL C5 C Y N 108 NAL C6 C Y N 109 NAL C7 C Y N 110 NAL C8 C Y N 111 NAL C8A C Y N 112 NAL C9 C N N 113 NAL CA C N S 114 NAL C C N N 115 NAL N N N N 116 NAL O O N N 117 NAL OXT O N N 118 NAL H1 H N N 119 NAL H3 H N N 120 NAL H4 H N N 121 NAL H5 H N N 122 NAL H6 H N N 123 NAL H7 H N N 124 NAL H8 H N N 125 NAL H91 H N N 126 NAL H92 H N N 127 NAL HA H N N 128 NAL H H N N 129 NAL H2 H N N 130 NAL HXT H N N 131 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 DCY N CA sing N N 45 DCY N H sing N N 46 DCY N H2 sing N N 47 DCY CA C sing N N 48 DCY CA CB sing N N 49 DCY CA HA sing N N 50 DCY C O doub N N 51 DCY C OXT sing N N 52 DCY CB SG sing N N 53 DCY CB HB2 sing N N 54 DCY CB HB3 sing N N 55 DCY SG HG sing N N 56 DCY OXT HXT sing N N 57 HIS N CA sing N N 58 HIS N H sing N N 59 HIS N H2 sing N N 60 HIS CA C sing N N 61 HIS CA CB sing N N 62 HIS CA HA sing N N 63 HIS C O doub N N 64 HIS C OXT sing N N 65 HIS CB CG sing N N 66 HIS CB HB2 sing N N 67 HIS CB HB3 sing N N 68 HIS CG ND1 sing Y N 69 HIS CG CD2 doub Y N 70 HIS ND1 CE1 doub Y N 71 HIS ND1 HD1 sing N N 72 HIS CD2 NE2 sing Y N 73 HIS CD2 HD2 sing N N 74 HIS CE1 NE2 sing Y N 75 HIS CE1 HE1 sing N N 76 HIS NE2 HE2 sing N N 77 HIS OXT HXT sing N N 78 LE1 O C doub N N 79 LE1 C OXT sing N N 80 LE1 CA C sing N N 81 LE1 CA CB sing N N 82 LE1 CA HA sing N N 83 LE1 N CA sing N N 84 LE1 N H sing N N 85 LE1 N H2 sing N N 86 LE1 CB C9 sing N N 87 LE1 CB C8 sing N N 88 LE1 C9 H9 sing N N 89 LE1 C9 H9A sing N N 90 LE1 C9 H9B sing N N 91 LE1 C8 H8 sing N N 92 LE1 C8 H8A sing N N 93 LE1 C8 H8B sing N N 94 LE1 SG CB sing N N 95 LE1 SG HSG sing N N 96 LE1 OXT HXT sing N N 97 NAL C6 C5 doub Y N 98 NAL C6 C7 sing Y N 99 NAL C5 C4A sing Y N 100 NAL C7 C8 doub Y N 101 NAL C4A C4 doub Y N 102 NAL C4A C8A sing Y N 103 NAL C8 C8A sing Y N 104 NAL C4 C3 sing Y N 105 NAL C8A C1 doub Y N 106 NAL C3 C2 doub Y N 107 NAL C1 C2 sing Y N 108 NAL C2 C9 sing N N 109 NAL C9 CA sing N N 110 NAL CA N sing N N 111 NAL CA C sing N N 112 NAL C O doub N N 113 NAL C OXT sing N N 114 NAL C1 H1 sing N N 115 NAL C3 H3 sing N N 116 NAL C4 H4 sing N N 117 NAL C5 H5 sing N N 118 NAL C6 H6 sing N N 119 NAL C7 H7 sing N N 120 NAL C8 H8 sing N N 121 NAL C9 H91 sing N N 122 NAL C9 H92 sing N N 123 NAL CA HA sing N N 124 NAL N H sing N N 125 NAL N H2 sing N N 126 NAL OXT HXT sing N N 127 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #