HEADER HYDROLASE 28-JUL-17 5OLU TITLE THE CRYSTAL STRUCTURE OF A HIGHLY THERMOSTABLE CARBOXYL ESTERASE FROM TITLE 2 BACILLUS COAGULANS IN COMPLEX WITH GLYCEROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA HYDROLASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS COAGULANS DSM 1 = ATCC 7050; SOURCE 3 ORGANISM_TAXID: 1121088; SOURCE 4 GENE: BF29_2874; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET100D-TOPO KEYWDS CARBOXYL ESTERASE, LIPASE, ALPHA/BETA HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.GOURLAY,C.NAKHNOUKH,M.BOLOGNESI REVDAT 5 17-JAN-24 5OLU 1 ATOM REVDAT 4 21-MAR-18 5OLU 1 JRNL REVDAT 3 24-JAN-18 5OLU 1 SOURCE REVDAT 2 03-JAN-18 5OLU 1 JRNL REVDAT 1 06-DEC-17 5OLU 0 JRNL AUTH V.DE VITIS,C.NAKHNOUKH,A.PINTO,M.L.CONTENTE,A.BARBIROLI, JRNL AUTH 2 M.MILANI,M.BOLOGNESI,F.MOLINARI,L.J.GOURLAY,D.ROMANO JRNL TITL A STEREOSPECIFIC CARBOXYL ESTERASE FROM BACILLUS COAGULANS JRNL TITL 2 HOSTING NONLIPASE ACTIVITY WITHIN A LIPASE-LIKE FOLD. JRNL REF FEBS J. V. 285 903 2018 JRNL REFN ISSN 1742-4658 JRNL PMID 29278448 JRNL DOI 10.1111/FEBS.14368 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 43626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.580 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7441 - 4.3365 1.00 3221 154 0.1488 0.1670 REMARK 3 2 4.3365 - 3.4427 1.00 3048 148 0.1312 0.1378 REMARK 3 3 3.4427 - 3.0077 1.00 3007 143 0.1569 0.1787 REMARK 3 4 3.0077 - 2.7327 1.00 2993 145 0.1515 0.1578 REMARK 3 5 2.7327 - 2.5369 1.00 2970 142 0.1524 0.1916 REMARK 3 6 2.5369 - 2.3874 1.00 2956 143 0.1431 0.1681 REMARK 3 7 2.3874 - 2.2678 1.00 2947 141 0.1390 0.1652 REMARK 3 8 2.2678 - 2.1691 1.00 2938 141 0.1380 0.1612 REMARK 3 9 2.1691 - 2.0856 1.00 2926 141 0.1465 0.1750 REMARK 3 10 2.0856 - 2.0136 1.00 2943 141 0.1504 0.1941 REMARK 3 11 2.0136 - 1.9507 1.00 2939 142 0.1487 0.1789 REMARK 3 12 1.9507 - 1.8949 1.00 2902 138 0.1485 0.1817 REMARK 3 13 1.8949 - 1.8450 1.00 2918 141 0.1620 0.1879 REMARK 3 14 1.8450 - 1.8000 1.00 2918 140 0.1938 0.2178 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2562 REMARK 3 ANGLE : 0.856 3472 REMARK 3 CHIRALITY : 0.055 359 REMARK 3 PLANARITY : 0.006 453 REMARK 3 DIHEDRAL : 13.001 1489 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6872 -23.3248 -12.8802 REMARK 3 T TENSOR REMARK 3 T11: 0.1027 T22: 0.1812 REMARK 3 T33: 0.1319 T12: -0.0319 REMARK 3 T13: -0.0328 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 4.6167 L22: 2.6810 REMARK 3 L33: 0.5658 L12: -1.7333 REMARK 3 L13: 0.4173 L23: -0.3572 REMARK 3 S TENSOR REMARK 3 S11: -0.1172 S12: -0.0917 S13: 0.3243 REMARK 3 S21: 0.1630 S22: 0.0920 S23: -0.2578 REMARK 3 S31: -0.1938 S32: 0.3346 S33: -0.0253 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.7988 -29.2647 -16.0696 REMARK 3 T TENSOR REMARK 3 T11: 0.0643 T22: 0.0822 REMARK 3 T33: 0.0858 T12: -0.0040 REMARK 3 T13: -0.0151 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.8251 L22: 1.1336 REMARK 3 L33: 2.0416 L12: -0.7728 REMARK 3 L13: -1.1358 L23: 0.4956 REMARK 3 S TENSOR REMARK 3 S11: -0.0065 S12: 0.0656 S13: 0.0498 REMARK 3 S21: -0.0074 S22: -0.0034 S23: -0.0359 REMARK 3 S31: -0.1295 S32: 0.0808 S33: 0.0112 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0843 -31.9760 -12.1826 REMARK 3 T TENSOR REMARK 3 T11: 0.0724 T22: 0.2180 REMARK 3 T33: 0.1315 T12: -0.0127 REMARK 3 T13: -0.0311 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.3850 L22: 1.4945 REMARK 3 L33: 1.2983 L12: -0.7472 REMARK 3 L13: -1.4375 L23: 0.0414 REMARK 3 S TENSOR REMARK 3 S11: -0.1387 S12: -0.0269 S13: -0.0120 REMARK 3 S21: 0.0894 S22: 0.0799 S23: -0.2113 REMARK 3 S31: 0.0372 S32: 0.3640 S33: 0.0276 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9337 -41.4962 -11.6883 REMARK 3 T TENSOR REMARK 3 T11: 0.0598 T22: 0.1217 REMARK 3 T33: 0.0831 T12: 0.0174 REMARK 3 T13: -0.0108 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.8900 L22: 1.7583 REMARK 3 L33: 1.5731 L12: -0.3415 REMARK 3 L13: -0.0253 L23: 0.2193 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: 0.0167 S13: -0.0880 REMARK 3 S21: 0.0887 S22: 0.0213 S23: -0.0693 REMARK 3 S31: 0.0880 S32: 0.2231 S33: -0.0388 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7683 -44.6815 -28.1413 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.5653 REMARK 3 T33: 0.2545 T12: 0.0517 REMARK 3 T13: 0.0412 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 5.7974 L22: 1.5524 REMARK 3 L33: 0.7652 L12: 0.9795 REMARK 3 L13: -0.7216 L23: -0.2107 REMARK 3 S TENSOR REMARK 3 S11: -0.1507 S12: 0.4669 S13: -0.2102 REMARK 3 S21: -0.0307 S22: 0.1015 S23: -0.1325 REMARK 3 S31: 0.0955 S32: 0.5125 S33: 0.0174 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.2154 -47.4326 -37.7546 REMARK 3 T TENSOR REMARK 3 T11: 0.2249 T22: 0.2356 REMARK 3 T33: 0.1634 T12: 0.0549 REMARK 3 T13: 0.0548 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.0989 L22: 6.8855 REMARK 3 L33: 5.6005 L12: -0.6046 REMARK 3 L13: -0.9185 L23: -4.3206 REMARK 3 S TENSOR REMARK 3 S11: 0.1683 S12: 0.3467 S13: 0.1460 REMARK 3 S21: -0.7710 S22: -0.0404 S23: -0.2386 REMARK 3 S31: 0.4373 S32: 0.4299 S33: -0.1108 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5313 -45.0981 -21.2524 REMARK 3 T TENSOR REMARK 3 T11: 0.0688 T22: 0.1719 REMARK 3 T33: 0.1211 T12: 0.0310 REMARK 3 T13: 0.0085 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.1676 L22: 0.4973 REMARK 3 L33: 0.4255 L12: -0.1122 REMARK 3 L13: 0.1872 L23: 0.1676 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.0349 S13: -0.0320 REMARK 3 S21: -0.0471 S22: -0.0211 S23: -0.1393 REMARK 3 S31: 0.0600 S32: 0.2366 S33: 0.0263 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.9875 -45.3354 -21.4963 REMARK 3 T TENSOR REMARK 3 T11: 0.0511 T22: 0.0764 REMARK 3 T33: 0.0885 T12: 0.0192 REMARK 3 T13: 0.0188 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.0379 L22: 1.7671 REMARK 3 L33: 2.3832 L12: -1.2176 REMARK 3 L13: 2.0288 L23: -1.6020 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: -0.0393 S13: -0.0571 REMARK 3 S21: 0.0212 S22: 0.1123 S23: 0.0753 REMARK 3 S31: -0.0669 S32: -0.1786 S33: -0.0903 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 309 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.8302 -39.5869 -12.1188 REMARK 3 T TENSOR REMARK 3 T11: 0.0375 T22: 0.0758 REMARK 3 T33: 0.1014 T12: 0.0335 REMARK 3 T13: 0.0170 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 3.8110 L22: 3.7407 REMARK 3 L33: 6.8415 L12: -0.1198 REMARK 3 L13: 1.2354 L23: -1.5774 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.1353 S13: -0.0942 REMARK 3 S21: 0.1951 S22: 0.1098 S23: 0.1413 REMARK 3 S31: -0.0925 S32: -0.3554 S33: -0.1008 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OLU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43646 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 39.10 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 37.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3PE6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HAMPTON CRYSTAL SCREEN 2 CONDITION 42. REMARK 280 1.5 M AMMONIUM SULFATE, 12% GLYCEROL AND 0.1 M TRIS-HCL, PH 8.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.81800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 41.81800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.81800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 41.81800 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 41.81800 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 41.81800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 503 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 532 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 622 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 651 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 666 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -35 REMARK 465 ARG A -34 REMARK 465 GLY A -33 REMARK 465 SER A -32 REMARK 465 HIS A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 GLY A -25 REMARK 465 MET A -24 REMARK 465 ALA A -23 REMARK 465 SER A -22 REMARK 465 MET A -21 REMARK 465 THR A -20 REMARK 465 GLY A -19 REMARK 465 GLY A -18 REMARK 465 GLN A -17 REMARK 465 GLN A -16 REMARK 465 MET A -15 REMARK 465 GLY A -14 REMARK 465 ARG A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 ASP A -9 REMARK 465 ASP A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 LYS A -5 REMARK 465 ASP A -4 REMARK 465 HIS A -3 REMARK 465 PRO A -2 REMARK 465 PHE A -1 REMARK 465 LYS A 310 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 158 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 265 O HOH A 501 2.12 REMARK 500 O HOH A 639 O HOH A 663 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 2 -117.34 -88.83 REMARK 500 LYS A 14 -43.19 -131.19 REMARK 500 GLU A 40 -158.98 -119.06 REMARK 500 SER A 114 -122.72 62.79 REMARK 500 ASN A 145 -7.93 75.55 REMARK 500 ARG A 283 -143.22 -84.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 412 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 413 DBREF1 5OLU A 1 310 UNP A0A0B5WSQ6_BACCO DBREF2 5OLU A A0A0B5WSQ6 1 310 SEQADV 5OLU MET A -35 UNP A0A0B5WSQ INITIATING METHIONINE SEQADV 5OLU ARG A -34 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLY A -33 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU SER A -32 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -31 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -30 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -29 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -28 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -27 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -26 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLY A -25 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU MET A -24 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ALA A -23 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU SER A -22 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU MET A -21 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU THR A -20 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLY A -19 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLY A -18 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLN A -17 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLN A -16 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU MET A -15 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU GLY A -14 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ARG A -13 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -12 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU LEU A -11 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU TYR A -10 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -9 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -8 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -7 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -6 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU LYS A -5 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU ASP A -4 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU HIS A -3 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU PRO A -2 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU PHE A -1 UNP A0A0B5WSQ EXPRESSION TAG SEQADV 5OLU THR A 0 UNP A0A0B5WSQ EXPRESSION TAG SEQRES 1 A 346 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 346 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 A 346 ASP ASP ASP ASP LYS ASP HIS PRO PHE THR MET ALA PHE SEQRES 4 A 346 GLN GLU LEU SER PHE GLN SER PHE ASN GLY LYS ASP ASN SEQRES 5 A 346 VAL LYS ALA TRP ILE TYR THR PRO ILE ARG LYS PRO ARG SEQRES 6 A 346 GLY ILE VAL GLN VAL VAL HIS GLY PHE GLY GLU HIS SER SEQRES 7 A 346 ARG ARG TYR LEU HIS MET ILE LEU LYS PHE ASN GLU ALA SEQRES 8 A 346 GLY PHE VAL VAL ALA ALA ASP ASP HIS VAL GLY HIS GLY SEQRES 9 A 346 LYS THR ALA TYR ASP SER GLY ASN TRP GLY ASP TRP GLY SEQRES 10 A 346 ASP LYS GLY TYR MET THR MET ALA GLU ASP GLU HIS THR SEQRES 11 A 346 LEU ARG LYS ILE VAL GLN GLU GLN TYR PRO ASP LEU PRO SEQRES 12 A 346 TYR PHE MET PHE GLY HIS SER MET GLY SER MET ILE ALA SEQRES 13 A 346 ARG GLY TYR ALA ALA THR HIS GLY ALA GLY LEU SER GLY SEQRES 14 A 346 LEU ILE LEU CYS GLY THR SER GLY ARG PHE PRO ASN ALA SEQRES 15 A 346 SER LYS LEU LEU PRO VAL LEU LYS ASN LEU ILE TYR GLU SEQRES 16 A 346 GLY LYS GLY GLN GLU THR ASP LEU SER TYR LEU GLU GLU SEQRES 17 A 346 LEU MET GLY TRP MET THR GLU ARG ILE GLU GLN PRO LYS SEQRES 18 A 346 THR PRO ASN ASP TRP ILE SER SER ASP PRO ASP ILE VAL SEQRES 19 A 346 ALA ASP HIS ALA ASN ASP PRO PHE ASN ASN PHE THR THR SEQRES 20 A 346 PRO PRO ASN ILE ARG SER LEU TYR TYR PHE VAL GLN MET SEQRES 21 A 346 MET GLU ILE ILE VAL GLY THR GLU TRP ALA GLU LYS VAL SEQRES 22 A 346 PRO VAL SER ILE PRO ILE TYR ASN ILE ALA GLY ASP GLN SEQRES 23 A 346 ASP PRO VAL GLY GLN TYR GLY GLU GLY VAL TYR ALA VAL SEQRES 24 A 346 SER ASN TRP LEU VAL GLN THR GLY HIS HIS VAL LYS THR SEQRES 25 A 346 LYS VAL TYR PRO GLY HIS ARG HIS GLU ILE HIS ASN ASP SEQRES 26 A 346 ARG ASP ILE ARG ASP GLU VAL GLU GLU GLY ILE ILE SER SEQRES 27 A 346 PHE ILE ASN GLY ILE ILE VAL LYS HET GOL A 401 14 HET GOL A 402 14 HET GOL A 403 14 HET CL A 404 1 HET CL A 405 1 HET CL A 406 1 HET CL A 407 1 HET CL A 408 1 HET CL A 409 1 HET CL A 410 1 HET CL A 411 1 HET PEG A 412 15 HET ACT A 413 7 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 CL 8(CL 1-) FORMUL 13 PEG C4 H10 O3 FORMUL 14 ACT C2 H3 O2 1- FORMUL 15 HOH *192(H2 O) HELIX 1 AA1 HIS A 41 ARG A 44 5 4 HELIX 2 AA2 TYR A 45 ALA A 55 1 11 HELIX 3 AA3 HIS A 67 GLY A 75 1 9 HELIX 4 AA4 MET A 86 TYR A 103 1 18 HELIX 5 AA5 SER A 114 HIS A 127 1 14 HELIX 6 AA6 ASN A 145 GLU A 159 1 15 HELIX 7 AA7 ASP A 166 GLY A 175 1 10 HELIX 8 AA8 ASN A 188 SER A 192 5 5 HELIX 9 AA9 ASP A 194 ASP A 204 1 11 HELIX 10 AB1 ASN A 214 ILE A 227 1 14 HELIX 11 AB2 VAL A 229 GLU A 235 1 7 HELIX 12 AB3 ASP A 251 GLN A 255 5 5 HELIX 13 AB4 GLY A 257 THR A 270 1 14 HELIX 14 AB5 ILE A 292 VAL A 309 1 18 SHEET 1 AA1 8 GLN A 4 GLN A 9 0 SHEET 2 AA1 8 ASN A 16 TYR A 22 -1 O VAL A 17 N PHE A 8 SHEET 3 AA1 8 PHE A 57 ASP A 63 -1 O VAL A 59 N TYR A 22 SHEET 4 AA1 8 GLY A 30 VAL A 35 1 N VAL A 32 O VAL A 58 SHEET 5 AA1 8 TYR A 108 HIS A 113 1 O PHE A 111 N GLN A 33 SHEET 6 AA1 8 LEU A 131 CYS A 137 1 O SER A 132 N TYR A 108 SHEET 7 AA1 8 ILE A 243 GLY A 248 1 O TYR A 244 N LEU A 136 SHEET 8 AA1 8 VAL A 274 TYR A 279 1 O TYR A 279 N ALA A 247 SITE 1 AC1 9 PHE A 38 GLU A 40 HIS A 113 SER A 114 SITE 2 AC1 9 HIS A 201 PHE A 209 HIS A 284 GLU A 285 SITE 3 AC1 9 HOH A 527 SITE 1 AC2 7 ASP A 200 ASN A 288 ARG A 290 HOH A 539 SITE 2 AC2 7 HOH A 544 HOH A 620 HOH A 649 SITE 1 AC3 6 GLN A 4 GLU A 5 TYR A 72 PRO A 205 SITE 2 AC3 6 PHE A 206 HOH A 514 SITE 1 AC4 3 TYR A 103 PRO A 104 ASP A 105 SITE 1 AC5 5 ARG A 26 ASP A 194 ILE A 197 ARG A 290 SITE 2 AC5 5 HOH A 670 SITE 1 AC6 3 GLY A 162 ARG A 216 HOH A 631 SITE 1 AC7 6 GLY A 141 ARG A 142 PHE A 143 MET A 225 SITE 2 AC7 6 GLU A 226 VAL A 229 SITE 1 AC8 1 HOH A 672 SITE 1 AC9 2 ARG A 142 TRP A 266 SITE 1 AD1 5 LYS A 185 ASP A 189 VAL A 198 HOH A 599 SITE 2 AD1 5 HOH A 610 SITE 1 AD2 3 PHE A 8 GLN A 9 HOH A 689 SITE 1 AD3 5 TRP A 77 PRO A 205 ASN A 207 ASN A 208 SITE 2 AD3 5 THR A 211 SITE 1 AD4 3 ARG A 26 HOH A 505 HOH A 507 CRYST1 137.644 137.644 83.636 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007265 0.004195 0.000000 0.00000 SCALE2 0.000000 0.008389 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011957 0.00000