HEADER MEMBRANE PROTEIN 28-JUL-17 5OLV
TITLE STRUCTURE OF THE A2A-STAR2-BRIL562-LUAA47070 COMPLEX AT 2.0A OBTAINED
TITLE 2 FROM IN MESO SOAKING EXPERIMENTS.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ADENOSINE RECEPTOR A2A,SOLUBLE CYTOCHROME B562,ADENOSINE
COMPND 3 RECEPTOR A2A;
COMPND 4 CHAIN: A;
COMPND 5 SYNONYM: CYTOCHROME B-562;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606, 562;
SOURCE 5 GENE: ADORA2A, ADORA2, CYBC;
SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS
KEYWDS G-PROTEIN COUPLED RECEPTOR, ADENOSINE 2A RECEPTOR, 7 TM INTEGRAL
KEYWDS 2 MEMBRANE PROTEIN, THERMOSTABILIZING MUTATIONS, MEMBRANE PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR P.RUCKTOOA,R.K.Y.CHENG,E.SEGALA,T.GENG,J.C.ERREY,G.A.BROWN,R.COOKE,
AUTHOR 2 F.H.MARSHALL,A.S.DORE
REVDAT 3 09-OCT-24 5OLV 1 REMARK
REVDAT 2 17-JAN-24 5OLV 1 LINK
REVDAT 1 17-JAN-18 5OLV 0
JRNL AUTH P.RUCKTOOA,R.K.Y.CHENG,E.SEGALA,T.GENG,J.C.ERREY,G.A.BROWN,
JRNL AUTH 2 R.M.COOKE,F.H.MARSHALL,A.S.DORE
JRNL TITL TOWARDS HIGH THROUGHPUT GPCR CRYSTALLOGRAPHY: IN MESO
JRNL TITL 2 SOAKING OF ADENOSINE A2A RECEPTOR CRYSTALS.
JRNL REF SCI REP V. 8 41 2018
JRNL REFN ESSN 2045-2322
JRNL PMID 29311713
JRNL DOI 10.1038/S41598-017-18570-W
REMARK 2
REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.12RC2_2821: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 76.08
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5
REMARK 3 NUMBER OF REFLECTIONS : 34171
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.181
REMARK 3 R VALUE (WORKING SET) : 0.180
REMARK 3 FREE R VALUE : 0.208
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010
REMARK 3 FREE R VALUE TEST SET COUNT : 3254
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 76.1343 - 5.6804 0.93 2551 101 0.1700 0.1678
REMARK 3 2 5.6804 - 4.5088 0.95 2609 122 0.1723 0.1913
REMARK 3 3 4.5088 - 3.9389 0.97 2652 130 0.1532 0.2024
REMARK 3 4 3.9389 - 3.5788 0.98 2680 131 0.1472 0.1687
REMARK 3 5 3.5788 - 3.3223 0.99 2735 142 0.1541 0.1670
REMARK 3 6 3.3223 - 3.1264 1.00 2755 120 0.1625 0.1879
REMARK 3 7 3.1264 - 2.9698 0.99 2703 131 0.1613 0.1840
REMARK 3 8 2.9698 - 2.8405 0.99 2683 158 0.1586 0.2211
REMARK 3 9 2.8405 - 2.7312 1.00 2690 183 0.1655 0.1999
REMARK 3 10 2.7312 - 2.6369 0.99 2662 131 0.1593 0.2046
REMARK 3 11 2.6369 - 2.5545 1.00 2741 149 0.1692 0.2012
REMARK 3 12 2.5545 - 2.4814 0.99 2715 141 0.1731 0.2115
REMARK 3 13 2.4814 - 2.4161 0.99 2709 161 0.1801 0.2268
REMARK 3 14 2.4161 - 2.3572 0.99 2696 145 0.1969 0.2344
REMARK 3 15 2.3572 - 2.3036 0.99 2664 131 0.2053 0.2346
REMARK 3 16 2.3036 - 2.2546 0.99 2772 124 0.2254 0.2421
REMARK 3 17 2.2546 - 2.2094 1.00 2701 159 0.2278 0.2567
REMARK 3 18 2.2094 - 2.1678 1.00 2711 148 0.2460 0.2378
REMARK 3 19 2.1678 - 2.1290 0.99 2753 137 0.2588 0.2727
REMARK 3 20 2.1290 - 2.0929 1.00 2652 163 0.2639 0.3007
REMARK 3 21 2.0929 - 2.0592 1.00 2695 147 0.2759 0.3076
REMARK 3 22 2.0592 - 2.0275 1.00 2758 151 0.2958 0.2812
REMARK 3 23 2.0275 - 1.9977 0.90 2420 149 0.3095 0.3509
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.190
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 38.60
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.009 3668
REMARK 3 ANGLE : 1.186 4909
REMARK 3 CHIRALITY : 0.052 544
REMARK 3 PLANARITY : 0.006 592
REMARK 3 DIHEDRAL : 13.416 1921
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: (CHAIN A AND (RESSEQ -1:208 OR RESSEQ 219:305 OR
REMARK 3 RESSEQ 1201))
REMARK 3 ORIGIN FOR THE GROUP (A): -22.0262 -6.8298 17.9139
REMARK 3 T TENSOR
REMARK 3 T11: 0.1546 T22: 0.1885
REMARK 3 T33: 0.1225 T12: -0.0061
REMARK 3 T13: 0.0019 T23: 0.0038
REMARK 3 L TENSOR
REMARK 3 L11: 1.1457 L22: 1.7163
REMARK 3 L33: 1.5380 L12: 0.2469
REMARK 3 L13: 0.2009 L23: 0.1413
REMARK 3 S TENSOR
REMARK 3 S11: -0.0126 S12: 0.0109 S13: -0.1076
REMARK 3 S21: -0.1188 S22: -0.0149 S23: -0.0502
REMARK 3 S31: 0.1797 S32: -0.0684 S33: 0.0344
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: (CHAIN A AND (RESSEQ 1001:1106))
REMARK 3 ORIGIN FOR THE GROUP (A): 0.5976 -54.9833 20.1385
REMARK 3 T TENSOR
REMARK 3 T11: 0.4223 T22: 0.3671
REMARK 3 T33: 0.8546 T12: 0.0597
REMARK 3 T13: -0.0041 T23: -0.0845
REMARK 3 L TENSOR
REMARK 3 L11: 1.4719 L22: 7.3501
REMARK 3 L33: 5.6253 L12: -1.7882
REMARK 3 L13: 1.2922 L23: -1.9988
REMARK 3 S TENSOR
REMARK 3 S11: 0.0917 S12: -0.2537 S13: 0.5615
REMARK 3 S21: -0.3813 S22: 0.0637 S23: -0.2192
REMARK 3 S31: 0.0754 S32: 0.0632 S33: -0.1574
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5OLV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-17.
REMARK 100 THE DEPOSITION ID IS D_1200006023.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 29-SEP-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 5.3-5.4
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I24
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.96857
REMARK 200 MONOCHROMATOR : SI(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34210
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.998
REMARK 200 RESOLUTION RANGE LOW (A) : 76.080
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5
REMARK 200 DATA REDUNDANCY : 3.600
REMARK 200 R MERGE (I) : 0.10300
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05
REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1
REMARK 200 DATA REDUNDANCY IN SHELL : 3.70
REMARK 200 R MERGE FOR SHELL (I) : 1.08200
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 5MZJ
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 52.90
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTAL GROWTH: 0.L M TRI-SODIUM
REMARK 280 CITRATE PH 5.3-5.4, 0.05 M SODIUM THIOCYANATE, 29-32% PEG400, 2%
REMARK 280 (V/V) 2,5-HEXANEDIOL AND 0.5 MM THEOPHYLLINE LUAA47070 WAS ADDED
REMARK 280 TO THE MOTHER LIQUOR TO A CONCENTRATION OF 0.005 MM FOR THE
REMARK 280 SOAKING EXPERIMENTS., LIPIDIC CUBIC PHASE, TEMPERATURE 293.15K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.45150
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.45150
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 19.71450
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 90.38700
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 19.71450
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 90.38700
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.45150
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 19.71450
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 90.38700
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.45150
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 19.71450
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 90.38700
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 21450 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 40.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A -9
REMARK 465 ASP A -8
REMARK 465 TYR A -7
REMARK 465 LYS A -6
REMARK 465 ASP A -5
REMARK 465 ASP A -4
REMARK 465 ASP A -3
REMARK 465 ASP A -2
REMARK 465 ALA A 1043
REMARK 465 THR A 1044
REMARK 465 PRO A 1045
REMARK 465 PRO A 1046
REMARK 465 LYS A 1047
REMARK 465 LEU A 1048
REMARK 465 GLU A 1049
REMARK 465 ASP A 1050
REMARK 465 LYS A 1051
REMARK 465 SER A 1052
REMARK 465 PRO A 1053
REMARK 465 ASP A 1054
REMARK 465 SER A 1055
REMARK 465 PRO A 1056
REMARK 465 GLU A 1057
REMARK 465 HIS A 306
REMARK 465 VAL A 307
REMARK 465 LEU A 308
REMARK 465 ARG A 309
REMARK 465 GLN A 310
REMARK 465 GLN A 311
REMARK 465 GLU A 312
REMARK 465 PRO A 313
REMARK 465 PHE A 314
REMARK 465 LYS A 315
REMARK 465 ALA A 316
REMARK 465 ALA A 317
REMARK 465 ALA A 318
REMARK 465 HIS A 319
REMARK 465 HIS A 320
REMARK 465 HIS A 321
REMARK 465 HIS A 322
REMARK 465 HIS A 323
REMARK 465 HIS A 324
REMARK 465 HIS A 325
REMARK 465 HIS A 326
REMARK 465 HIS A 327
REMARK 465 HIS A 328
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O23 OLC A 1220 C24 OLC A 1222 1.88
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 58 -55.64 -122.42
REMARK 500 TYR A1101 -57.53 -126.09
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY
REMARK 500
REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY
REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER
REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 500 I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI ANGLE
REMARK 500 LEU A 208 -10.08
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 OLA A 1207
REMARK 610 OLA A 1208
REMARK 610 OLA A 1209
REMARK 610 OLA A 1210
REMARK 610 OLA A 1212
REMARK 610 OLA A 1213
REMARK 610 OLA A 1214
REMARK 610 OLA A 1215
REMARK 610 OLA A 1217
REMARK 610 OLC A 1218
REMARK 610 OLC A 1219
REMARK 610 OLC A 1220
REMARK 610 OLC A 1221
REMARK 610 OLC A 1223
REMARK 610 OLC A 1224
REMARK 610 OLC A 1225
REMARK 610 OLC A 1226
REMARK 610 OLA A 1228
REMARK 610 OLC A 1229
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A1202 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 52 OD1
REMARK 620 2 SER A 91 OG 122.9
REMARK 620 3 HOH A1311 O 98.4 119.2
REMARK 620 4 HOH A1360 O 77.6 62.3 90.1
REMARK 620 5 HOH A1378 O 87.1 125.9 95.4 164.4
REMARK 620 N 1 2 3 4
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 9Y2 A 1201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 1202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 1203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 1204
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 1205
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 1206
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1207
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1208
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1209
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1210
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1212
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1214
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1215
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1216
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1217
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1218
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1219
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1220
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1221
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1222
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1223
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1224
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1225
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1226
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1227
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 1228
REMARK 800
REMARK 800 SITE_IDENTIFIER: AE9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 1229
DBREF 5OLV A 2 208 UNP P29274 AA2AR_HUMAN 2 208
DBREF 5OLV A 1001 1106 UNP P0ABE7 C562_ECOLX 23 128
DBREF 5OLV A 219 317 UNP P29274 AA2AR_HUMAN 219 317
SEQADV 5OLV ALA A -9 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ASP A -8 UNP P29274 EXPRESSION TAG
SEQADV 5OLV TYR A -7 UNP P29274 EXPRESSION TAG
SEQADV 5OLV LYS A -6 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ASP A -5 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ASP A -4 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ASP A -3 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ASP A -2 UNP P29274 EXPRESSION TAG
SEQADV 5OLV GLY A -1 UNP P29274 EXPRESSION TAG
SEQADV 5OLV ALA A 0 UNP P29274 EXPRESSION TAG
SEQADV 5OLV PRO A 1 UNP P29274 EXPRESSION TAG
SEQADV 5OLV LEU A 54 UNP P29274 ALA 54 ENGINEERED MUTATION
SEQADV 5OLV ALA A 88 UNP P29274 THR 88 ENGINEERED MUTATION
SEQADV 5OLV ALA A 107 UNP P29274 ARG 107 ENGINEERED MUTATION
SEQADV 5OLV ALA A 122 UNP P29274 LYS 122 ENGINEERED MUTATION
SEQADV 5OLV ALA A 154 UNP P29274 ASN 154 ENGINEERED MUTATION
SEQADV 5OLV ALA A 202 UNP P29274 LEU 202 ENGINEERED MUTATION
SEQADV 5OLV TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION
SEQADV 5OLV ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION
SEQADV 5OLV LEU A 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION
SEQADV 5OLV ALA A 235 UNP P29274 LEU 235 ENGINEERED MUTATION
SEQADV 5OLV ALA A 239 UNP P29274 VAL 239 ENGINEERED MUTATION
SEQADV 5OLV ALA A 277 UNP P29274 SER 277 ENGINEERED MUTATION
SEQADV 5OLV ALA A 318 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 319 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 320 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 321 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 322 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 323 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 324 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 325 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 326 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 327 UNP P29274 EXPRESSION TAG
SEQADV 5OLV HIS A 328 UNP P29274 EXPRESSION TAG
SEQRES 1 A 434 ALA ASP TYR LYS ASP ASP ASP ASP GLY ALA PRO PRO ILE
SEQRES 2 A 434 MET GLY SER SER VAL TYR ILE THR VAL GLU LEU ALA ILE
SEQRES 3 A 434 ALA VAL LEU ALA ILE LEU GLY ASN VAL LEU VAL CYS TRP
SEQRES 4 A 434 ALA VAL TRP LEU ASN SER ASN LEU GLN ASN VAL THR ASN
SEQRES 5 A 434 TYR PHE VAL VAL SER LEU ALA ALA ALA ASP ILE LEU VAL
SEQRES 6 A 434 GLY VAL LEU ALA ILE PRO PHE ALA ILE THR ILE SER THR
SEQRES 7 A 434 GLY PHE CYS ALA ALA CYS HIS GLY CYS LEU PHE ILE ALA
SEQRES 8 A 434 CYS PHE VAL LEU VAL LEU ALA GLN SER SER ILE PHE SER
SEQRES 9 A 434 LEU LEU ALA ILE ALA ILE ASP ARG TYR ILE ALA ILE ALA
SEQRES 10 A 434 ILE PRO LEU ARG TYR ASN GLY LEU VAL THR GLY THR ARG
SEQRES 11 A 434 ALA ALA GLY ILE ILE ALA ILE CYS TRP VAL LEU SER PHE
SEQRES 12 A 434 ALA ILE GLY LEU THR PRO MET LEU GLY TRP ASN ASN CYS
SEQRES 13 A 434 GLY GLN PRO LYS GLU GLY LYS ALA HIS SER GLN GLY CYS
SEQRES 14 A 434 GLY GLU GLY GLN VAL ALA CYS LEU PHE GLU ASP VAL VAL
SEQRES 15 A 434 PRO MET ASN TYR MET VAL TYR PHE ASN PHE PHE ALA CYS
SEQRES 16 A 434 VAL LEU VAL PRO LEU LEU LEU MET LEU GLY VAL TYR LEU
SEQRES 17 A 434 ARG ILE PHE ALA ALA ALA ARG ARG GLN LEU ALA ASP LEU
SEQRES 18 A 434 GLU ASP ASN TRP GLU THR LEU ASN ASP ASN LEU LYS VAL
SEQRES 19 A 434 ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL LYS ASP ALA
SEQRES 20 A 434 LEU THR LYS MET ARG ALA ALA ALA LEU ASP ALA GLN LYS
SEQRES 21 A 434 ALA THR PRO PRO LYS LEU GLU ASP LYS SER PRO ASP SER
SEQRES 22 A 434 PRO GLU MET LYS ASP PHE ARG HIS GLY PHE ASP ILE LEU
SEQRES 23 A 434 VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU
SEQRES 24 A 434 GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU
SEQRES 25 A 434 LYS THR THR ARG ASN ALA TYR ILE GLN LYS TYR LEU GLU
SEQRES 26 A 434 ARG ALA ARG SER THR LEU GLN LYS GLU VAL HIS ALA ALA
SEQRES 27 A 434 LYS SER ALA ALA ILE ILE ALA GLY LEU PHE ALA LEU CYS
SEQRES 28 A 434 TRP LEU PRO LEU HIS ILE ILE ASN CYS PHE THR PHE PHE
SEQRES 29 A 434 CYS PRO ASP CYS SER HIS ALA PRO LEU TRP LEU MET TYR
SEQRES 30 A 434 LEU ALA ILE VAL LEU ALA HIS THR ASN SER VAL VAL ASN
SEQRES 31 A 434 PRO PHE ILE TYR ALA TYR ARG ILE ARG GLU PHE ARG GLN
SEQRES 32 A 434 THR PHE ARG LYS ILE ILE ARG SER HIS VAL LEU ARG GLN
SEQRES 33 A 434 GLN GLU PRO PHE LYS ALA ALA ALA HIS HIS HIS HIS HIS
SEQRES 34 A 434 HIS HIS HIS HIS HIS
HET 9Y2 A1201 24
HET NA A1202 1
HET CLR A1203 28
HET CLR A1204 28
HET CLR A1205 28
HET CLR A1206 28
HET OLA A1207 15
HET OLA A1208 9
HET OLA A1209 9
HET OLA A1210 18
HET OLA A1211 20
HET OLA A1212 12
HET OLA A1213 8
HET OLA A1214 15
HET OLA A1215 19
HET OLA A1216 20
HET OLA A1217 9
HET OLC A1218 17
HET OLC A1219 18
HET OLC A1220 22
HET OLC A1221 20
HET OLC A1222 25
HET OLC A1223 24
HET OLC A1224 18
HET OLC A1225 19
HET OLC A1226 20
HET OLA A1227 20
HET OLA A1228 9
HET OLC A1229 13
HETNAM 9Y2 4-(3,3-DIMETHYLBUTANOYLAMINO)-3,5-BIS(FLUORANYL)-~{N}-
HETNAM 2 9Y2 (1,3-THIAZOL-2-YL)BENZAMIDE
HETNAM NA SODIUM ION
HETNAM CLR CHOLESTEROL
HETNAM OLA OLEIC ACID
HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
HETSYN OLC 1-OLEOYL-R-GLYCEROL
FORMUL 2 9Y2 C16 H17 F2 N3 O2 S
FORMUL 3 NA NA 1+
FORMUL 4 CLR 4(C27 H46 O)
FORMUL 8 OLA 13(C18 H34 O2)
FORMUL 19 OLC 10(C21 H40 O4)
FORMUL 31 HOH *115(H2 O)
HELIX 1 AA1 PRO A 1 ASN A 34 1 34
HELIX 2 AA2 SER A 35 GLN A 38 5 4
HELIX 3 AA3 ASN A 39 LEU A 58 1 20
HELIX 4 AA4 LEU A 58 THR A 68 1 11
HELIX 5 AA5 CYS A 74 ILE A 108 1 35
HELIX 6 AA6 ILE A 108 VAL A 116 1 9
HELIX 7 AA7 THR A 117 LEU A 137 1 21
HELIX 8 AA8 THR A 138 GLY A 142 5 5
HELIX 9 AA9 LYS A 150 GLN A 157 1 8
HELIX 10 AB1 LEU A 167 VAL A 172 1 6
HELIX 11 AB2 PRO A 173 PHE A 180 1 8
HELIX 12 AB3 VAL A 186 LYS A 1019 1 42
HELIX 13 AB4 ASN A 1022 LYS A 1042 1 21
HELIX 14 AB5 LYS A 1059 GLU A 1081 1 23
HELIX 15 AB6 LYS A 1083 GLN A 1093 1 11
HELIX 16 AB7 GLN A 1093 TYR A 1101 1 9
HELIX 17 AB8 TYR A 1101 CYS A 259 1 47
HELIX 18 AB9 PRO A 266 ILE A 292 1 27
HELIX 19 AC1 ILE A 292 SER A 305 1 14
SHEET 1 AA1 2 CYS A 71 ALA A 73 0
SHEET 2 AA1 2 GLN A 163 ALA A 165 -1 O VAL A 164 N ALA A 72
SSBOND 1 CYS A 71 CYS A 159 1555 1555 2.06
SSBOND 2 CYS A 74 CYS A 146 1555 1555 2.07
SSBOND 3 CYS A 77 CYS A 166 1555 1555 2.07
SSBOND 4 CYS A 259 CYS A 262 1555 1555 2.06
LINK OD1 ASP A 52 NA NA A1202 1555 1555 2.45
LINK OG SER A 91 NA NA A1202 1555 1555 2.60
LINK NA NA A1202 O HOH A1311 1555 1555 2.60
LINK NA NA A1202 O HOH A1360 1555 1555 2.86
LINK NA NA A1202 O HOH A1378 1555 1555 2.32
SITE 1 AC1 13 ALA A 63 ILE A 66 VAL A 84 PHE A 168
SITE 2 AC1 13 MET A 177 LEU A 249 HIS A 250 ASN A 253
SITE 3 AC1 13 ILE A 274 HOH A1325 HOH A1335 HOH A1370
SITE 4 AC1 13 HOH A1383
SITE 1 AC2 5 ASP A 52 SER A 91 HOH A1311 HOH A1360
SITE 2 AC2 5 HOH A1378
SITE 1 AC3 5 HIS A 75 GLY A 76 OLC A1218 HOH A1318
SITE 2 AC3 5 HOH A1343
SITE 1 AC4 7 ALA A 72 ALA A 73 GLY A 76 ILE A 80
SITE 2 AC4 7 CLR A1206 OLC A1222 OLC A1225
SITE 1 AC5 6 PRO A 248 CYS A 262 SER A 263 LEU A 269
SITE 2 AC5 6 OLA A1207 OLA A1214
SITE 1 AC6 5 PHE A 255 PHE A 258 CLR A1204 OLC A1222
SITE 2 AC6 5 HOH A1346
SITE 1 AC7 2 LEU A 272 CLR A1205
SITE 1 AC8 3 PHE A 44 ALA A 97 VAL A 116
SITE 1 AC9 2 THR A 279 VAL A 282
SITE 1 AD1 3 GLY A 5 TRP A 268 VAL A 275
SITE 1 AD2 3 SER A 7 LEU A 26 PHE A 286
SITE 1 AD3 3 CLR A1205 OLA A1216 OLC A1220
SITE 1 AD4 4 CYS A 28 TRP A 29 TRP A 32 LYS A 233
SITE 1 AD5 2 THR A 65 OLA A1214
SITE 1 AD6 2 TYR A 197 OLC A1229
SITE 1 AD7 4 TYR A 179 PHE A 258 CLR A1203 OLC A1225
SITE 1 AD8 6 PRO A 2 SER A 6 SER A 67 THR A 68
SITE 2 AD8 6 HOH A1301 HOH A1345
SITE 1 AD9 5 PHE A 255 ASP A 261 LYS A1085 OLA A1214
SITE 2 AD9 5 OLC A1222
SITE 1 AE1 3 LEU A 141 OLC A1226 OLA A1228
SITE 1 AE2 7 THR A 65 CYS A 71 CYS A 259 ASP A 261
SITE 2 AE2 7 CLR A1204 CLR A1206 OLC A1220
SITE 1 AE3 4 TYR A 43 PHE A 83 ILE A 125 TRP A 129
SITE 1 AE4 8 CYS A 28 VAL A 31 TRP A 32 GLN A 38
SITE 2 AE4 8 TYR A 43 ALA A 50 LEU A 54 ARG A 205
SITE 1 AE5 9 ALA A 73 GLN A 163 PHE A 183 LEU A 187
SITE 2 AE5 9 PHE A 258 CLR A1204 OLC A1218 HOH A1318
SITE 3 AE5 9 HOH A1346
SITE 1 AE6 9 HIS A 75 MET A 140 LEU A 141 GLY A 142
SITE 2 AE6 9 ASN A 144 TYR A 179 ALA A 184 OLC A1221
SITE 3 AE6 9 OLA A1228
SITE 1 AE7 2 SER A 7 THR A 11
SITE 1 AE8 3 HIS A 75 OLC A1221 OLC A1226
SITE 1 AE9 6 ALA A 236 ILE A 237 GLY A 240 LEU A 244
SITE 2 AE9 6 OLA A1217 HOH A1302
CRYST1 39.429 180.774 140.903 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.025362 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005532 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007097 0.00000