data_5OMT # _entry.id 5OMT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5OMT WWPDB D_1200006052 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5OMT _pdbx_database_status.recvd_initial_deposition_date 2017-08-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Basle, A.' 1 0000-0002-4899-3086 'Lewis, R.J.' 2 0000-0003-2641-8643 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 473 _citation.page_last 484 _citation.title 'Crystal structure of NucB, a biofilm-degrading endonuclease.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx1170 _citation.pdbx_database_id_PubMed 29165717 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Basle, A.' 1 primary 'Hewitt, L.' 2 primary 'Koh, A.' 3 primary 'Lamb, H.K.' 4 primary 'Thompson, P.' 5 primary 'Burgess, J.G.' 6 primary 'Hall, M.J.' 7 primary 'Hawkins, A.R.' 8 primary 'Murray, H.' 9 primary 'Lewis, R.J.' 10 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5OMT _cell.details ? _cell.formula_units_Z ? _cell.length_a 59.955 _cell.length_a_esd ? _cell.length_b 59.955 _cell.length_b_esd ? _cell.length_c 66.604 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man NucB 12014.332 1 ? ? ? ? 2 water nat water 18.015 104 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYV SSSDNRGAGSWVGNRLNGYADGTRILFIVQ ; _entity_poly.pdbx_seq_one_letter_code_can ;AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYV SSSDNRGAGSWVGNRLNGYADGTRILFIVQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 ARG n 1 4 TYR n 1 5 ASP n 1 6 ASP n 1 7 VAL n 1 8 LEU n 1 9 TYR n 1 10 PHE n 1 11 PRO n 1 12 ALA n 1 13 SER n 1 14 ARG n 1 15 TYR n 1 16 PRO n 1 17 GLU n 1 18 THR n 1 19 GLY n 1 20 ALA n 1 21 HIS n 1 22 ILE n 1 23 SER n 1 24 ASP n 1 25 ALA n 1 26 ILE n 1 27 LYS n 1 28 ALA n 1 29 GLY n 1 30 HIS n 1 31 ALA n 1 32 ASP n 1 33 VAL n 1 34 CYS n 1 35 THR n 1 36 ILE n 1 37 GLU n 1 38 ARG n 1 39 SER n 1 40 GLY n 1 41 ALA n 1 42 ASP n 1 43 LYS n 1 44 ARG n 1 45 ARG n 1 46 GLN n 1 47 GLU n 1 48 SER n 1 49 LEU n 1 50 LYS n 1 51 GLY n 1 52 ILE n 1 53 PRO n 1 54 THR n 1 55 LYS n 1 56 PRO n 1 57 GLY n 1 58 PHE n 1 59 ASP n 1 60 ARG n 1 61 ASP n 1 62 GLU n 1 63 TRP n 1 64 PRO n 1 65 MET n 1 66 ALA n 1 67 MET n 1 68 CYS n 1 69 GLU n 1 70 GLU n 1 71 GLY n 1 72 GLY n 1 73 LYS n 1 74 GLY n 1 75 ALA n 1 76 SER n 1 77 VAL n 1 78 ARG n 1 79 TYR n 1 80 VAL n 1 81 SER n 1 82 SER n 1 83 SER n 1 84 ASP n 1 85 ASN n 1 86 ARG n 1 87 GLY n 1 88 ALA n 1 89 GLY n 1 90 SER n 1 91 TRP n 1 92 VAL n 1 93 GLY n 1 94 ASN n 1 95 ARG n 1 96 LEU n 1 97 ASN n 1 98 GLY n 1 99 TYR n 1 100 ALA n 1 101 ASP n 1 102 GLY n 1 103 THR n 1 104 ARG n 1 105 ILE n 1 106 LEU n 1 107 PHE n 1 108 ILE n 1 109 VAL n 1 110 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 110 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene nucB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus licheniformis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1402 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1423 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F1BV52_BACLI _struct_ref.pdbx_db_accession F1BV52 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYV SSSDNRGAGSWVGNRLNGYADGTRILFIVQ ; _struct_ref.pdbx_align_begin 33 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5OMT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession F1BV52 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 142 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 33 _struct_ref_seq.pdbx_auth_seq_align_end 142 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OMT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MES pH6.5 12% PEG 20000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-07-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5OMT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.35 _reflns.d_resolution_low 44.56 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27361 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.991 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.37 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1316 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.944 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.79 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.79 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.58 _refine.B_iso_max ? _refine.B_iso_mean 18.443 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5OMT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.35 _refine.ls_d_res_low 44.56 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25934 _refine.ls_number_reflns_R_free 1369 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.15034 _refine.ls_R_factor_R_free 0.18623 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.14850 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.048 _refine.pdbx_overall_ESU_R_Free 0.049 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.528 _refine.overall_SU_ML 0.028 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 839 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 943 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 44.56 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.019 870 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 780 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.676 1.943 1178 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.996 3.000 1808 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.752 5.000 114 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.634 22.381 42 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.034 15.000 140 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.784 15.000 10 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.109 0.200 119 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 1005 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 197 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.302 1.506 441 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.224 1.494 440 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.812 2.261 551 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.835 2.270 552 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.458 1.949 429 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.343 1.925 426 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.901 2.757 623 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.521 19.441 1005 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 4.424 19.011 984 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 2.176 3.000 1650 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 18.023 5.000 76 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 10.774 5.000 1656 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.350 _refine_ls_shell.d_res_low 1.385 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_R_work 1891 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.233 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.184 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5OMT _struct.title 'Endonuclease NucB' _struct.pdbx_descriptor NucB _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OMT _struct_keywords.text 'Endonuclease, biofilm, Bacillus subtilis, DNA, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 15 ? ALA A 28 ? TYR A 47 ALA A 60 1 ? 14 HELX_P HELX_P2 AA2 GLY A 40 ? LYS A 50 ? GLY A 72 LYS A 82 1 ? 11 HELX_P HELX_P3 AA3 SER A 82 ? ASN A 97 ? SER A 114 ASN A 129 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 34 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 68 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 66 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 100 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.049 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 63 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 95 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 64 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 96 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.27 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 6 ? TYR A 9 ? ASP A 38 TYR A 41 AA1 2 ARG A 104 ? ILE A 108 ? ARG A 136 ILE A 140 AA1 3 VAL A 33 ? THR A 35 ? VAL A 65 THR A 67 AA2 1 PHE A 58 ? TRP A 63 ? PHE A 90 TRP A 95 AA2 2 SER A 76 ? SER A 81 ? SER A 108 SER A 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 8 ? N LEU A 40 O LEU A 106 ? O LEU A 138 AA1 2 3 O ILE A 105 ? O ILE A 137 N CYS A 34 ? N CYS A 66 AA2 1 2 N ASP A 59 ? N ASP A 91 O VAL A 80 ? O VAL A 112 # _atom_sites.entry_id 5OMT _atom_sites.fract_transf_matrix[1][1] 0.016679 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016679 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015014 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 33 ? ? ? A . n A 1 2 ALA 2 34 2 ALA ALA A . n A 1 3 ARG 3 35 3 ARG ARG A . n A 1 4 TYR 4 36 4 TYR TYR A . n A 1 5 ASP 5 37 5 ASP ASP A . n A 1 6 ASP 6 38 6 ASP ASP A . n A 1 7 VAL 7 39 7 VAL VAL A . n A 1 8 LEU 8 40 8 LEU LEU A . n A 1 9 TYR 9 41 9 TYR TYR A . n A 1 10 PHE 10 42 10 PHE PHE A . n A 1 11 PRO 11 43 11 PRO PRO A . n A 1 12 ALA 12 44 12 ALA ALA A . n A 1 13 SER 13 45 13 SER SER A . n A 1 14 ARG 14 46 14 ARG ARG A . n A 1 15 TYR 15 47 15 TYR TYR A . n A 1 16 PRO 16 48 16 PRO PRO A . n A 1 17 GLU 17 49 17 GLU GLU A . n A 1 18 THR 18 50 18 THR THR A . n A 1 19 GLY 19 51 19 GLY GLY A . n A 1 20 ALA 20 52 20 ALA ALA A . n A 1 21 HIS 21 53 21 HIS HIS A . n A 1 22 ILE 22 54 22 ILE ILE A . n A 1 23 SER 23 55 23 SER SER A . n A 1 24 ASP 24 56 24 ASP ASP A . n A 1 25 ALA 25 57 25 ALA ALA A . n A 1 26 ILE 26 58 26 ILE ILE A . n A 1 27 LYS 27 59 27 LYS LYS A . n A 1 28 ALA 28 60 28 ALA ALA A . n A 1 29 GLY 29 61 29 GLY GLY A . n A 1 30 HIS 30 62 30 HIS HIS A . n A 1 31 ALA 31 63 31 ALA ALA A . n A 1 32 ASP 32 64 32 ASP ASP A . n A 1 33 VAL 33 65 33 VAL VAL A . n A 1 34 CYS 34 66 34 CYS CYS A . n A 1 35 THR 35 67 35 THR THR A . n A 1 36 ILE 36 68 36 ILE ILE A . n A 1 37 GLU 37 69 37 GLU GLU A . n A 1 38 ARG 38 70 38 ARG ARG A . n A 1 39 SER 39 71 39 SER SER A . n A 1 40 GLY 40 72 40 GLY GLY A . n A 1 41 ALA 41 73 41 ALA ALA A . n A 1 42 ASP 42 74 42 ASP ASP A . n A 1 43 LYS 43 75 43 LYS LYS A . n A 1 44 ARG 44 76 44 ARG ARG A . n A 1 45 ARG 45 77 45 ARG ARG A . n A 1 46 GLN 46 78 46 GLN GLN A . n A 1 47 GLU 47 79 47 GLU GLU A . n A 1 48 SER 48 80 48 SER SER A . n A 1 49 LEU 49 81 49 LEU LEU A . n A 1 50 LYS 50 82 50 LYS LYS A . n A 1 51 GLY 51 83 51 GLY GLY A . n A 1 52 ILE 52 84 52 ILE ILE A . n A 1 53 PRO 53 85 53 PRO PRO A . n A 1 54 THR 54 86 54 THR THR A . n A 1 55 LYS 55 87 55 LYS LYS A . n A 1 56 PRO 56 88 56 PRO PRO A . n A 1 57 GLY 57 89 57 GLY GLY A . n A 1 58 PHE 58 90 58 PHE PHE A . n A 1 59 ASP 59 91 59 ASP ASP A . n A 1 60 ARG 60 92 60 ARG ARG A . n A 1 61 ASP 61 93 61 ASP ASP A . n A 1 62 GLU 62 94 62 GLU GLU A . n A 1 63 TRP 63 95 63 TRP TRP A . n A 1 64 PRO 64 96 64 PRO PRO A . n A 1 65 MET 65 97 65 MET MET A . n A 1 66 ALA 66 98 66 ALA ALA A . n A 1 67 MET 67 99 67 MET MET A . n A 1 68 CYS 68 100 68 CYS CYS A . n A 1 69 GLU 69 101 69 GLU GLU A . n A 1 70 GLU 70 102 70 GLU GLU A . n A 1 71 GLY 71 103 71 GLY GLY A . n A 1 72 GLY 72 104 72 GLY GLY A . n A 1 73 LYS 73 105 73 LYS LYS A . n A 1 74 GLY 74 106 74 GLY GLY A . n A 1 75 ALA 75 107 75 ALA ALA A . n A 1 76 SER 76 108 76 SER SER A . n A 1 77 VAL 77 109 77 VAL VAL A . n A 1 78 ARG 78 110 78 ARG ARG A . n A 1 79 TYR 79 111 79 TYR TYR A . n A 1 80 VAL 80 112 80 VAL VAL A . n A 1 81 SER 81 113 81 SER SER A . n A 1 82 SER 82 114 82 SER SER A . n A 1 83 SER 83 115 83 SER SER A . n A 1 84 ASP 84 116 84 ASP ASP A . n A 1 85 ASN 85 117 85 ASN ASN A . n A 1 86 ARG 86 118 86 ARG ARG A . n A 1 87 GLY 87 119 87 GLY GLY A . n A 1 88 ALA 88 120 88 ALA ALA A . n A 1 89 GLY 89 121 89 GLY GLY A . n A 1 90 SER 90 122 90 SER SER A . n A 1 91 TRP 91 123 91 TRP TRP A . n A 1 92 VAL 92 124 92 VAL VAL A . n A 1 93 GLY 93 125 93 GLY GLY A . n A 1 94 ASN 94 126 94 ASN ASN A . n A 1 95 ARG 95 127 95 ARG ARG A . n A 1 96 LEU 96 128 96 LEU LEU A . n A 1 97 ASN 97 129 97 ASN ASN A . n A 1 98 GLY 98 130 98 GLY GLY A . n A 1 99 TYR 99 131 99 TYR TYR A . n A 1 100 ALA 100 132 100 ALA ALA A . n A 1 101 ASP 101 133 101 ASP ASP A . n A 1 102 GLY 102 134 102 GLY GLY A . n A 1 103 THR 103 135 103 THR THR A . n A 1 104 ARG 104 136 104 ARG ARG A . n A 1 105 ILE 105 137 105 ILE ILE A . n A 1 106 LEU 106 138 106 LEU LEU A . n A 1 107 PHE 107 139 107 PHE PHE A . n A 1 108 ILE 108 140 108 ILE ILE A . n A 1 109 VAL 109 141 109 VAL VAL A . n A 1 110 GLN 110 142 110 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 94 HOH HOH A . B 2 HOH 2 202 102 HOH HOH A . B 2 HOH 3 203 88 HOH HOH A . B 2 HOH 4 204 103 HOH HOH A . B 2 HOH 5 205 93 HOH HOH A . B 2 HOH 6 206 59 HOH HOH A . B 2 HOH 7 207 18 HOH HOH A . B 2 HOH 8 208 39 HOH HOH A . B 2 HOH 9 209 66 HOH HOH A . B 2 HOH 10 210 72 HOH HOH A . B 2 HOH 11 211 61 HOH HOH A . B 2 HOH 12 212 58 HOH HOH A . B 2 HOH 13 213 80 HOH HOH A . B 2 HOH 14 214 57 HOH HOH A . B 2 HOH 15 215 31 HOH HOH A . B 2 HOH 16 216 76 HOH HOH A . B 2 HOH 17 217 45 HOH HOH A . B 2 HOH 18 218 43 HOH HOH A . B 2 HOH 19 219 25 HOH HOH A . B 2 HOH 20 220 82 HOH HOH A . B 2 HOH 21 221 13 HOH HOH A . B 2 HOH 22 222 81 HOH HOH A . B 2 HOH 23 223 3 HOH HOH A . B 2 HOH 24 224 100 HOH HOH A . B 2 HOH 25 225 27 HOH HOH A . B 2 HOH 26 226 2 HOH HOH A . B 2 HOH 27 227 46 HOH HOH A . B 2 HOH 28 228 15 HOH HOH A . B 2 HOH 29 229 35 HOH HOH A . B 2 HOH 30 230 48 HOH HOH A . B 2 HOH 31 231 23 HOH HOH A . B 2 HOH 32 232 47 HOH HOH A . B 2 HOH 33 233 30 HOH HOH A . B 2 HOH 34 234 14 HOH HOH A . B 2 HOH 35 235 32 HOH HOH A . B 2 HOH 36 236 1 HOH HOH A . B 2 HOH 37 237 26 HOH HOH A . B 2 HOH 38 238 74 HOH HOH A . B 2 HOH 39 239 21 HOH HOH A . B 2 HOH 40 240 64 HOH HOH A . B 2 HOH 41 241 49 HOH HOH A . B 2 HOH 42 242 40 HOH HOH A . B 2 HOH 43 243 11 HOH HOH A . B 2 HOH 44 244 67 HOH HOH A . B 2 HOH 45 245 86 HOH HOH A . B 2 HOH 46 246 75 HOH HOH A . B 2 HOH 47 247 51 HOH HOH A . B 2 HOH 48 248 62 HOH HOH A . B 2 HOH 49 249 6 HOH HOH A . B 2 HOH 50 250 60 HOH HOH A . B 2 HOH 51 251 24 HOH HOH A . B 2 HOH 52 252 79 HOH HOH A . B 2 HOH 53 253 50 HOH HOH A . B 2 HOH 54 254 9 HOH HOH A . B 2 HOH 55 255 4 HOH HOH A . B 2 HOH 56 256 33 HOH HOH A . B 2 HOH 57 257 16 HOH HOH A . B 2 HOH 58 258 69 HOH HOH A . B 2 HOH 59 259 90 HOH HOH A . B 2 HOH 60 260 63 HOH HOH A . B 2 HOH 61 261 42 HOH HOH A . B 2 HOH 62 262 7 HOH HOH A . B 2 HOH 63 263 77 HOH HOH A . B 2 HOH 64 264 22 HOH HOH A . B 2 HOH 65 265 8 HOH HOH A . B 2 HOH 66 266 38 HOH HOH A . B 2 HOH 67 267 10 HOH HOH A . B 2 HOH 68 268 20 HOH HOH A . B 2 HOH 69 269 55 HOH HOH A . B 2 HOH 70 270 83 HOH HOH A . B 2 HOH 71 271 36 HOH HOH A . B 2 HOH 72 272 17 HOH HOH A . B 2 HOH 73 273 34 HOH HOH A . B 2 HOH 74 274 41 HOH HOH A . B 2 HOH 75 275 101 HOH HOH A . B 2 HOH 76 276 52 HOH HOH A . B 2 HOH 77 277 12 HOH HOH A . B 2 HOH 78 278 28 HOH HOH A . B 2 HOH 79 279 89 HOH HOH A . B 2 HOH 80 280 56 HOH HOH A . B 2 HOH 81 281 54 HOH HOH A . B 2 HOH 82 282 78 HOH HOH A . B 2 HOH 83 283 19 HOH HOH A . B 2 HOH 84 284 5 HOH HOH A . B 2 HOH 85 285 104 HOH HOH A . B 2 HOH 86 286 65 HOH HOH A . B 2 HOH 87 287 95 HOH HOH A . B 2 HOH 88 288 87 HOH HOH A . B 2 HOH 89 289 37 HOH HOH A . B 2 HOH 90 290 73 HOH HOH A . B 2 HOH 91 291 92 HOH HOH A . B 2 HOH 92 292 96 HOH HOH A . B 2 HOH 93 293 91 HOH HOH A . B 2 HOH 94 294 68 HOH HOH A . B 2 HOH 95 295 85 HOH HOH A . B 2 HOH 96 296 70 HOH HOH A . B 2 HOH 97 297 84 HOH HOH A . B 2 HOH 98 298 71 HOH HOH A . B 2 HOH 99 299 53 HOH HOH A . B 2 HOH 100 300 97 HOH HOH A . B 2 HOH 101 301 29 HOH HOH A . B 2 HOH 102 302 99 HOH HOH A . B 2 HOH 103 303 98 HOH HOH A . B 2 HOH 104 304 44 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6030 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-15 2 'Structure model' 1 1 2017-12-06 3 'Structure model' 1 2 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.name' 11 3 'Structure model' '_citation.journal_volume' 12 3 'Structure model' '_citation.page_first' 13 3 'Structure model' '_citation.page_last' 14 3 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? SHELXE ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? ARP/wARP ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? BUCCANEER ? ? ? . 6 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 7 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 8 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 77 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 224 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 227 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 1.94 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 141 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -130.99 _pdbx_validate_torsion.psi -53.41 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 33 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #