HEADER METAL BINDING PROTEIN 02-AUG-17 5ON4 TITLE CRYSTAL STRUCTURE OF NIKA IN COMPLEX WITH FE-L1 (N-(2-HYDROXYBENZYL)- TITLE 2 N'-(2-THIOMETHYLBENZYL)-N,N'-ETHYLENEDIAMINE DIACETIC ACID) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICKEL-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: NIKA, B3476, JW3441; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARTIFICIAL OXYGENASE, CLEC, DIOXYGEN ACTIVATION, OXIDATION OF CARBON- KEYWDS 2 CARBON DOUBLE BONDS, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CAVAZZA,S.MENAGE REVDAT 4 17-JAN-24 5ON4 1 REMARK REVDAT 3 16-OCT-19 5ON4 1 REMARK REVDAT 2 20-DEC-17 5ON4 1 JRNL REVDAT 1 13-DEC-17 5ON4 0 JRNL AUTH S.LOPEZ,L.RONDOT,C.LEPRETRE,C.MARCHI-DELAPIERRE,S.MENAGE, JRNL AUTH 2 C.CAVAZZA JRNL TITL CROSS-LINKED ARTIFICIAL ENZYME CRYSTALS AS HETEROGENEOUS JRNL TITL 2 CATALYSTS FOR OXIDATION REACTIONS. JRNL REF J. AM. CHEM. SOC. V. 139 17994 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 29148757 JRNL DOI 10.1021/JACS.7B09343 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 46340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4494 - 5.9099 0.93 2663 141 0.1873 0.2174 REMARK 3 2 5.9099 - 4.6924 0.95 2587 136 0.1922 0.2231 REMARK 3 3 4.6924 - 4.0997 0.95 2569 135 0.1824 0.2238 REMARK 3 4 4.0997 - 3.7251 0.96 2563 135 0.1923 0.2364 REMARK 3 5 3.7251 - 3.4582 0.96 2577 136 0.2212 0.2676 REMARK 3 6 3.4582 - 3.2543 0.97 2593 136 0.2371 0.2952 REMARK 3 7 3.2543 - 3.0914 0.97 2588 136 0.2459 0.2955 REMARK 3 8 3.0914 - 2.9569 0.97 2588 137 0.2544 0.3292 REMARK 3 9 2.9569 - 2.8430 0.97 2559 134 0.2682 0.3288 REMARK 3 10 2.8430 - 2.7449 0.98 2620 138 0.2787 0.3442 REMARK 3 11 2.7449 - 2.6591 0.98 2568 135 0.2889 0.3495 REMARK 3 12 2.6591 - 2.5831 0.98 2599 137 0.2829 0.3582 REMARK 3 13 2.5831 - 2.5151 0.98 2582 136 0.2833 0.3577 REMARK 3 14 2.5151 - 2.4538 0.99 2619 138 0.2985 0.3799 REMARK 3 15 2.4538 - 2.3980 0.98 2566 135 0.2884 0.3285 REMARK 3 16 2.3980 - 2.3470 0.98 2598 137 0.2970 0.3141 REMARK 3 17 2.3470 - 2.3000 0.98 2583 136 0.2911 0.3236 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8315 REMARK 3 ANGLE : 0.851 11349 REMARK 3 CHIRALITY : 0.032 1233 REMARK 3 PLANARITY : 0.004 1489 REMARK 3 DIHEDRAL : 14.750 3140 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ON4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006074. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46346 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 45.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.430 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3MVW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE 100 MM, PH 4.6 AMMONIUM REMARK 280 SULFATE 1.7 M, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.34500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.77250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.06050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.77250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.34500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.06050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 VAL A 500 REMARK 465 LYS A 501 REMARK 465 PRO A 502 REMARK 465 ALA B 1 REMARK 465 VAL B 500 REMARK 465 LYS B 501 REMARK 465 PRO B 502 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 723 O HOH B 737 1.89 REMARK 500 O ALA A 369 O HOH A 701 1.91 REMARK 500 O HOH B 726 O HOH B 736 1.94 REMARK 500 O SER A 355 O HOH A 702 1.94 REMARK 500 OD2 ASP B 370 O HOH B 701 1.99 REMARK 500 OH TYR B 485 O HOH B 702 2.08 REMARK 500 N ILE A 359 O HOH A 702 2.10 REMARK 500 O1 GOL A 604 O HOH A 703 2.19 REMARK 500 OE2 GLU B 58 N GLY B 60 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 22 -138.33 -105.88 REMARK 500 TRP A 49 -97.17 -138.30 REMARK 500 SER A 114 -156.26 -147.97 REMARK 500 LYS A 157 -78.79 -102.17 REMARK 500 SER A 170 88.83 -151.66 REMARK 500 SER A 170 88.24 -152.64 REMARK 500 ASN A 173 14.42 59.80 REMARK 500 GLN A 174 -58.36 -132.78 REMARK 500 ASN A 181 99.69 -61.72 REMARK 500 ASN A 220 -157.36 -81.53 REMARK 500 TYR A 310 109.27 -53.53 REMARK 500 TYR B 22 -125.99 -107.30 REMARK 500 TYR B 22 -125.45 -107.30 REMARK 500 TRP B 49 -91.18 -132.50 REMARK 500 SER B 57 -132.53 -118.93 REMARK 500 GLU B 58 -122.51 70.73 REMARK 500 ASP B 59 23.80 178.74 REMARK 500 ASN B 94 49.31 -103.46 REMARK 500 ASN B 105 33.56 -140.08 REMARK 500 LEU B 122 -159.26 -108.91 REMARK 500 ALA B 125 78.85 -59.73 REMARK 500 PRO B 128 32.61 -90.97 REMARK 500 LYS B 157 -88.09 -88.44 REMARK 500 GLN B 168 -65.57 -97.75 REMARK 500 GLN B 174 -75.15 -121.51 REMARK 500 ASN B 220 -149.67 -80.42 REMARK 500 GLN B 309 153.49 -26.78 REMARK 500 PRO B 401 31.91 -96.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 57 GLU B 58 113.64 REMARK 500 GLU B 58 ASP B 59 -146.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 9YK A 602 REMARK 610 9YK B 602 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 9YK A 602 NAL REMARK 620 2 9YK A 602 N 79.3 REMARK 620 3 9YK A 602 O 135.7 65.4 REMARK 620 4 9YK A 602 OAY 103.9 85.6 99.5 REMARK 620 5 GOL A 603 O3 146.1 129.6 77.9 67.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 9YK B 602 OAY REMARK 620 2 9YK B 602 N 82.4 REMARK 620 3 9YK B 602 O 101.1 70.0 REMARK 620 4 9YK B 602 NAL 151.8 84.4 97.6 REMARK 620 5 9YK B 602 OBA 90.5 97.3 161.2 66.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9YK A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9YK B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 603 DBREF 5ON4 A 1 502 UNP P33590 NIKA_ECOLI 23 524 DBREF 5ON4 B 1 502 UNP P33590 NIKA_ECOLI 23 524 SEQRES 1 A 502 ALA ALA PRO ASP GLU ILE THR THR ALA TRP PRO VAL ASN SEQRES 2 A 502 VAL GLY PRO LEU ASN PRO HIS LEU TYR THR PRO ASN GLN SEQRES 3 A 502 MET PHE ALA GLN SER MET VAL TYR GLU PRO LEU VAL LYS SEQRES 4 A 502 TYR GLN ALA ASP GLY SER VAL ILE PRO TRP LEU ALA LYS SEQRES 5 A 502 SER TRP THR HIS SER GLU ASP GLY LYS THR TRP THR PHE SEQRES 6 A 502 THR LEU ARG ASP ASP VAL LYS PHE SER ASN GLY GLU PRO SEQRES 7 A 502 PHE ASP ALA GLU ALA ALA ALA GLU ASN PHE ARG ALA VAL SEQRES 8 A 502 LEU ASP ASN ARG GLN ARG HIS ALA TRP LEU GLU LEU ALA SEQRES 9 A 502 ASN GLN ILE VAL ASP VAL LYS ALA LEU SER LYS THR GLU SEQRES 10 A 502 LEU GLN ILE THR LEU LYS SER ALA TYR TYR PRO PHE LEU SEQRES 11 A 502 GLN GLU LEU ALA LEU PRO ARG PRO PHE ARG PHE ILE ALA SEQRES 12 A 502 PRO SER GLN PHE LYS ASN HIS GLU THR MET ASN GLY ILE SEQRES 13 A 502 LYS ALA PRO ILE GLY THR GLY PRO TRP ILE LEU GLN GLU SEQRES 14 A 502 SER LYS LEU ASN GLN TYR ASP VAL PHE VAL ARG ASN GLU SEQRES 15 A 502 ASN TYR TRP GLY GLU LYS PRO ALA ILE LYS LYS ILE THR SEQRES 16 A 502 PHE ASN VAL ILE PRO ASP PRO THR THR ARG ALA VAL ALA SEQRES 17 A 502 PHE GLU THR GLY ASP ILE ASP LEU LEU TYR GLY ASN GLU SEQRES 18 A 502 GLY LEU LEU PRO LEU ASP THR PHE ALA ARG PHE SER GLN SEQRES 19 A 502 ASN PRO ALA TYR HIS THR GLN LEU SER GLN PRO ILE GLU SEQRES 20 A 502 THR VAL MET LEU ALA LEU ASN THR ALA LYS ALA PRO THR SEQRES 21 A 502 ASN GLU LEU ALA VAL ARG GLU ALA LEU ASN TYR ALA VAL SEQRES 22 A 502 ASN LYS LYS SER LEU ILE ASP ASN ALA LEU TYR GLY THR SEQRES 23 A 502 GLN GLN VAL ALA ASP THR LEU PHE ALA PRO SER VAL PRO SEQRES 24 A 502 TYR ALA ASN LEU GLY LEU LYS PRO SER GLN TYR ASP PRO SEQRES 25 A 502 GLN LYS ALA LYS ALA LEU LEU GLU LYS ALA GLY TRP THR SEQRES 26 A 502 LEU PRO ALA GLY LYS ASP ILE ARG GLU LYS ASN GLY GLN SEQRES 27 A 502 PRO LEU ARG ILE GLU LEU SER PHE ILE GLY THR ASP ALA SEQRES 28 A 502 LEU SER LYS SER MET ALA GLU ILE ILE GLN ALA ASP MET SEQRES 29 A 502 ARG GLN ILE GLY ALA ASP VAL SER LEU ILE GLY GLU GLU SEQRES 30 A 502 GLU SER SER ILE TYR ALA ARG GLN ARG ASP GLY ARG PHE SEQRES 31 A 502 GLY MET ILE PHE HIS ARG THR TRP GLY ALA PRO TYR ASP SEQRES 32 A 502 PRO HIS ALA PHE LEU SER SER MET ARG VAL PRO SER HIS SEQRES 33 A 502 ALA ASP PHE GLN ALA GLN GLN GLY LEU ALA ASP LYS PRO SEQRES 34 A 502 LEU ILE ASP LYS GLU ILE GLY GLU VAL LEU ALA THR HIS SEQRES 35 A 502 ASP GLU THR GLN ARG GLN ALA LEU TYR ARG ASP ILE LEU SEQRES 36 A 502 THR ARG LEU HIS ASP GLU ALA VAL TYR LEU PRO ILE SER SEQRES 37 A 502 TYR ILE SER MET MET VAL VAL SER LYS PRO GLU LEU GLY SEQRES 38 A 502 ASN ILE PRO TYR ALA PRO ILE ALA THR GLU ILE PRO PHE SEQRES 39 A 502 GLU GLN ILE LYS PRO VAL LYS PRO SEQRES 1 B 502 ALA ALA PRO ASP GLU ILE THR THR ALA TRP PRO VAL ASN SEQRES 2 B 502 VAL GLY PRO LEU ASN PRO HIS LEU TYR THR PRO ASN GLN SEQRES 3 B 502 MET PHE ALA GLN SER MET VAL TYR GLU PRO LEU VAL LYS SEQRES 4 B 502 TYR GLN ALA ASP GLY SER VAL ILE PRO TRP LEU ALA LYS SEQRES 5 B 502 SER TRP THR HIS SER GLU ASP GLY LYS THR TRP THR PHE SEQRES 6 B 502 THR LEU ARG ASP ASP VAL LYS PHE SER ASN GLY GLU PRO SEQRES 7 B 502 PHE ASP ALA GLU ALA ALA ALA GLU ASN PHE ARG ALA VAL SEQRES 8 B 502 LEU ASP ASN ARG GLN ARG HIS ALA TRP LEU GLU LEU ALA SEQRES 9 B 502 ASN GLN ILE VAL ASP VAL LYS ALA LEU SER LYS THR GLU SEQRES 10 B 502 LEU GLN ILE THR LEU LYS SER ALA TYR TYR PRO PHE LEU SEQRES 11 B 502 GLN GLU LEU ALA LEU PRO ARG PRO PHE ARG PHE ILE ALA SEQRES 12 B 502 PRO SER GLN PHE LYS ASN HIS GLU THR MET ASN GLY ILE SEQRES 13 B 502 LYS ALA PRO ILE GLY THR GLY PRO TRP ILE LEU GLN GLU SEQRES 14 B 502 SER LYS LEU ASN GLN TYR ASP VAL PHE VAL ARG ASN GLU SEQRES 15 B 502 ASN TYR TRP GLY GLU LYS PRO ALA ILE LYS LYS ILE THR SEQRES 16 B 502 PHE ASN VAL ILE PRO ASP PRO THR THR ARG ALA VAL ALA SEQRES 17 B 502 PHE GLU THR GLY ASP ILE ASP LEU LEU TYR GLY ASN GLU SEQRES 18 B 502 GLY LEU LEU PRO LEU ASP THR PHE ALA ARG PHE SER GLN SEQRES 19 B 502 ASN PRO ALA TYR HIS THR GLN LEU SER GLN PRO ILE GLU SEQRES 20 B 502 THR VAL MET LEU ALA LEU ASN THR ALA LYS ALA PRO THR SEQRES 21 B 502 ASN GLU LEU ALA VAL ARG GLU ALA LEU ASN TYR ALA VAL SEQRES 22 B 502 ASN LYS LYS SER LEU ILE ASP ASN ALA LEU TYR GLY THR SEQRES 23 B 502 GLN GLN VAL ALA ASP THR LEU PHE ALA PRO SER VAL PRO SEQRES 24 B 502 TYR ALA ASN LEU GLY LEU LYS PRO SER GLN TYR ASP PRO SEQRES 25 B 502 GLN LYS ALA LYS ALA LEU LEU GLU LYS ALA GLY TRP THR SEQRES 26 B 502 LEU PRO ALA GLY LYS ASP ILE ARG GLU LYS ASN GLY GLN SEQRES 27 B 502 PRO LEU ARG ILE GLU LEU SER PHE ILE GLY THR ASP ALA SEQRES 28 B 502 LEU SER LYS SER MET ALA GLU ILE ILE GLN ALA ASP MET SEQRES 29 B 502 ARG GLN ILE GLY ALA ASP VAL SER LEU ILE GLY GLU GLU SEQRES 30 B 502 GLU SER SER ILE TYR ALA ARG GLN ARG ASP GLY ARG PHE SEQRES 31 B 502 GLY MET ILE PHE HIS ARG THR TRP GLY ALA PRO TYR ASP SEQRES 32 B 502 PRO HIS ALA PHE LEU SER SER MET ARG VAL PRO SER HIS SEQRES 33 B 502 ALA ASP PHE GLN ALA GLN GLN GLY LEU ALA ASP LYS PRO SEQRES 34 B 502 LEU ILE ASP LYS GLU ILE GLY GLU VAL LEU ALA THR HIS SEQRES 35 B 502 ASP GLU THR GLN ARG GLN ALA LEU TYR ARG ASP ILE LEU SEQRES 36 B 502 THR ARG LEU HIS ASP GLU ALA VAL TYR LEU PRO ILE SER SEQRES 37 B 502 TYR ILE SER MET MET VAL VAL SER LYS PRO GLU LEU GLY SEQRES 38 B 502 ASN ILE PRO TYR ALA PRO ILE ALA THR GLU ILE PRO PHE SEQRES 39 B 502 GLU GLN ILE LYS PRO VAL LYS PRO HET FE A 601 1 HET 9YK A 602 29 HET GOL A 603 6 HET GOL A 604 6 HET FE B 601 1 HET 9YK B 602 29 HET GOL B 603 6 HET GOL B 604 6 HETNAM FE FE (III) ION HETNAM 9YK 2-[2-[[2,3-BIS(OXIDANYL)PHENYL]METHYL-(2-HYDROXY-2- HETNAM 2 9YK OXOETHYL)AMINO]ETHYL-[(2-METHYLSULFANYLPHENYL) HETNAM 3 9YK METHYL]AMINO]ETHANOIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FE 2(FE 3+) FORMUL 4 9YK 2(C21 H26 N2 O6 S) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 11 HOH *90(H2 O) HELIX 1 AA1 GLN A 26 TYR A 34 1 9 HELIX 2 AA2 ASP A 80 ASP A 93 1 14 HELIX 3 AA3 ASN A 94 ALA A 99 5 6 HELIX 4 AA4 LEU A 101 ASN A 105 5 5 HELIX 5 AA5 PRO A 128 ALA A 134 1 7 HELIX 6 AA6 ALA A 143 SER A 145 5 3 HELIX 7 AA7 ASP A 201 THR A 211 1 11 HELIX 8 AA8 PRO A 225 SER A 233 1 9 HELIX 9 AA9 GLU A 262 VAL A 273 1 12 HELIX 10 AB1 ASN A 274 ALA A 282 1 9 HELIX 11 AB2 ASP A 311 GLY A 323 1 13 HELIX 12 AB3 ASP A 350 GLN A 366 1 17 HELIX 13 AB4 GLU A 377 GLY A 388 1 12 HELIX 14 AB5 PRO A 404 SER A 410 1 7 HELIX 15 AB6 MET A 411 VAL A 413 5 3 HELIX 16 AB7 HIS A 416 GLN A 423 1 8 HELIX 17 AB8 ASP A 427 THR A 441 1 15 HELIX 18 AB9 ASP A 443 GLU A 461 1 19 HELIX 19 AC1 PRO A 478 GLY A 481 5 4 HELIX 20 AC2 PRO A 493 ILE A 497 5 5 HELIX 21 AC3 GLN B 26 TYR B 34 1 9 HELIX 22 AC4 ASP B 80 ASP B 93 1 14 HELIX 23 AC5 ASN B 94 ALA B 99 5 6 HELIX 24 AC6 LEU B 101 GLN B 106 5 6 HELIX 25 AC7 PRO B 128 ALA B 134 1 7 HELIX 26 AC8 ALA B 143 PHE B 147 5 5 HELIX 27 AC9 ASP B 201 THR B 211 1 11 HELIX 28 AD1 PRO B 225 ASN B 235 1 11 HELIX 29 AD2 GLU B 262 TYR B 271 1 10 HELIX 30 AD3 ASN B 274 ALA B 282 1 9 HELIX 31 AD4 ASP B 311 GLY B 323 1 13 HELIX 32 AD5 ASP B 350 GLN B 366 1 17 HELIX 33 AD6 GLU B 377 GLY B 388 1 12 HELIX 34 AD7 PRO B 404 SER B 410 1 7 HELIX 35 AD8 HIS B 416 GLN B 423 1 8 HELIX 36 AD9 ASP B 427 THR B 441 1 15 HELIX 37 AE1 ASP B 443 GLU B 461 1 19 HELIX 38 AE2 PRO B 478 GLY B 481 5 4 HELIX 39 AE3 PRO B 493 ILE B 497 5 5 SHEET 1 AA1 4 GLU A 5 TRP A 10 0 SHEET 2 AA1 4 LYS A 193 VAL A 198 1 O THR A 195 N THR A 8 SHEET 3 AA1 4 TYR A 175 ARG A 180 -1 N ASP A 176 O PHE A 196 SHEET 4 AA1 4 TRP A 165 LYS A 171 -1 N GLN A 168 O VAL A 177 SHEET 1 AA2 2 VAL A 38 TYR A 40 0 SHEET 2 AA2 2 VAL A 46 PRO A 48 -1 O ILE A 47 N LYS A 39 SHEET 1 AA3 4 ALA A 51 HIS A 56 0 SHEET 2 AA3 4 THR A 62 LEU A 67 -1 O THR A 66 N SER A 53 SHEET 3 AA3 4 GLU A 117 LEU A 122 -1 O LEU A 118 N PHE A 65 SHEET 4 AA3 4 ILE A 107 ALA A 112 -1 N VAL A 108 O THR A 121 SHEET 1 AA4 2 PHE A 147 LYS A 148 0 SHEET 2 AA4 2 GLU A 151 ILE A 156 -1 O GLU A 151 N LYS A 148 SHEET 1 AA5 3 LEU A 216 GLY A 219 0 SHEET 2 AA5 3 TYR A 464 SER A 476 -1 O MET A 473 N GLY A 219 SHEET 3 AA5 3 GLN A 288 VAL A 289 -1 N GLN A 288 O TYR A 469 SHEET 1 AA6 6 LEU A 216 GLY A 219 0 SHEET 2 AA6 6 TYR A 464 SER A 476 -1 O MET A 473 N GLY A 219 SHEET 3 AA6 6 HIS A 239 LEU A 253 -1 N VAL A 249 O SER A 468 SHEET 4 AA6 6 MET A 392 ARG A 396 -1 O HIS A 395 N MET A 250 SHEET 5 AA6 6 ARG A 341 ILE A 347 1 N GLU A 343 O MET A 392 SHEET 6 AA6 6 ASP A 370 GLU A 376 1 O SER A 372 N ILE A 342 SHEET 1 AA7 2 GLU A 334 LYS A 335 0 SHEET 2 AA7 2 GLN A 338 PRO A 339 -1 O GLN A 338 N LYS A 335 SHEET 1 AA8 4 GLU B 5 TRP B 10 0 SHEET 2 AA8 4 LYS B 193 VAL B 198 1 O THR B 195 N THR B 8 SHEET 3 AA8 4 TYR B 175 ARG B 180 -1 N PHE B 178 O ILE B 194 SHEET 4 AA8 4 TRP B 165 LYS B 171 -1 N GLN B 168 O VAL B 177 SHEET 1 AA9 2 VAL B 38 TYR B 40 0 SHEET 2 AA9 2 VAL B 46 PRO B 48 -1 O ILE B 47 N LYS B 39 SHEET 1 AB1 4 ALA B 51 HIS B 56 0 SHEET 2 AB1 4 THR B 62 LEU B 67 -1 O THR B 66 N SER B 53 SHEET 3 AB1 4 GLU B 117 THR B 121 -1 O LEU B 118 N PHE B 65 SHEET 4 AB1 4 ASP B 109 LYS B 111 -1 N LYS B 111 O GLN B 119 SHEET 1 AB2 3 LEU B 216 GLY B 219 0 SHEET 2 AB2 3 MET B 473 SER B 476 -1 O MET B 473 N GLY B 219 SHEET 3 AB2 3 HIS B 239 LEU B 242 -1 N HIS B 239 O SER B 476 SHEET 1 AB3 6 GLN B 288 VAL B 289 0 SHEET 2 AB3 6 TYR B 464 ILE B 470 -1 O TYR B 469 N GLN B 288 SHEET 3 AB3 6 GLU B 247 LEU B 253 -1 N VAL B 249 O SER B 468 SHEET 4 AB3 6 MET B 392 ARG B 396 -1 O ILE B 393 N ALA B 252 SHEET 5 AB3 6 ARG B 341 ILE B 347 1 N GLU B 343 O MET B 392 SHEET 6 AB3 6 ASP B 370 GLU B 376 1 O SER B 372 N ILE B 342 SHEET 1 AB4 2 GLU B 334 LYS B 335 0 SHEET 2 AB4 2 GLN B 338 PRO B 339 -1 O GLN B 338 N LYS B 335 LINK FE FE A 601 NAL 9YK A 602 1555 1555 2.40 LINK FE FE A 601 N 9YK A 602 1555 1555 2.28 LINK FE FE A 601 O 9YK A 602 1555 1555 2.23 LINK FE FE A 601 OAY 9YK A 602 1555 1555 2.03 LINK FE FE A 601 O3 GOL A 603 1555 1555 2.16 LINK FE FE B 601 OAY 9YK B 602 1555 1555 2.07 LINK FE FE B 601 N 9YK B 602 1555 1555 2.30 LINK FE FE B 601 O 9YK B 602 1555 1555 1.98 LINK FE FE B 601 NAL 9YK B 602 1555 1555 2.25 LINK FE FE B 601 OBA 9YK B 602 1555 1555 2.24 CISPEP 1 THR A 23 PRO A 24 0 8.21 CISPEP 2 ARG A 137 PRO A 138 0 0.70 CISPEP 3 ALA A 258 PRO A 259 0 -1.80 CISPEP 4 ALA A 400 PRO A 401 0 -0.35 CISPEP 5 ASP A 403 PRO A 404 0 2.38 CISPEP 6 THR B 23 PRO B 24 0 3.46 CISPEP 7 THR B 23 PRO B 24 0 3.37 CISPEP 8 ARG B 137 PRO B 138 0 3.97 CISPEP 9 ALA B 258 PRO B 259 0 -2.02 CISPEP 10 ALA B 400 PRO B 401 0 -3.58 CISPEP 11 ASP B 403 PRO B 404 0 1.57 SITE 1 AC1 2 9YK A 602 GOL A 603 SITE 1 AC2 9 TYR A 22 THR A 23 MET A 27 ARG A 137 SITE 2 AC2 9 TRP A 398 HIS A 416 FE A 601 GOL A 603 SITE 3 AC2 9 HOH A 739 SITE 1 AC3 2 FE A 601 9YK A 602 SITE 1 AC4 4 TRP A 54 HIS A 56 HOH A 703 HOH A 717 SITE 1 AC5 2 9YK B 602 GOL B 603 SITE 1 AC6 11 TYR B 22 THR B 23 MET B 27 ARG B 97 SITE 2 AC6 11 TRP B 100 ARG B 137 TRP B 398 TYR B 402 SITE 3 AC6 11 HIS B 416 FE B 601 GOL B 603 SITE 1 AC7 3 THR B 23 FE B 601 9YK B 602 CRYST1 86.690 94.121 129.545 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007719 0.00000