HEADER VIRAL PROTEIN 08-AUG-17 5OOO TITLE STRUCTURE OF THE RIFT VALLEY FEVER VIRUS NSS PROTEIN CORE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN NS-S; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RIFT VALLEY FEVER VIRUS; SOURCE 3 ORGANISM_COMMON: RVFV; SOURCE 4 ORGANISM_TAXID: 11588; SOURCE 5 GENE: NSS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C2X KEYWDS NON-STRUCTURAL PROTEIN, INTERFERON ANTAGONIST, VIRULENCE FACTOR, KEYWDS 2 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.S.BARSKI,J.A.POTTER,U.SCHWARZ-LINEK REVDAT 4 08-MAY-24 5OOO 1 REMARK REVDAT 3 27-SEP-17 5OOO 1 JRNL REVDAT 2 13-SEP-17 5OOO 1 REMARK REVDAT 1 16-AUG-17 5OOO 0 JRNL AUTH M.BARSKI,B.BRENNAN,O.K.MILLER,J.A.POTTER,S.VIJAYAKRISHNAN, JRNL AUTH 2 D.BHELLA,J.H.NAISMITH,R.M.ELLIOTT,U.SCHWARZ-LINEK JRNL TITL RIFT VALLEY FEVER PHLEBOVIRUS NSS PROTEIN CORE DOMAIN JRNL TITL 2 STRUCTURE SUGGESTS MOLECULAR BASIS FOR NUCLEAR FILAMENTS. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28915104 JRNL DOI 10.7554/ELIFE.29236 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0107 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 107.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2065 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2817 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.3950 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.4130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.451 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2546 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2535 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3447 ; 1.767 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5815 ; 1.344 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 317 ; 5.959 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;31.131 ;22.991 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 460 ;13.573 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;11.045 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 405 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2803 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 565 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 164 B 2 164 18558 0.090 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 79 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1760 -0.9490 102.1060 REMARK 3 T TENSOR REMARK 3 T11: 0.0396 T22: 0.3619 REMARK 3 T33: 0.0141 T12: 0.0727 REMARK 3 T13: -0.0134 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 2.4144 L22: 1.6415 REMARK 3 L33: 2.7625 L12: 0.3511 REMARK 3 L13: -0.2647 L23: -0.4456 REMARK 3 S TENSOR REMARK 3 S11: -0.0906 S12: -0.1210 S13: -0.0671 REMARK 3 S21: 0.0776 S22: 0.1029 S23: -0.1285 REMARK 3 S31: 0.1006 S32: 0.2719 S33: -0.0123 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 80 B 164 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2880 14.0080 84.1340 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.7547 REMARK 3 T33: 0.5258 T12: -0.1964 REMARK 3 T13: 0.0851 T23: -0.1151 REMARK 3 L TENSOR REMARK 3 L11: 4.0289 L22: 4.6903 REMARK 3 L33: 2.1664 L12: -0.7553 REMARK 3 L13: -0.6324 L23: 1.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0819 S12: 0.1918 S13: 0.6670 REMARK 3 S21: -0.5593 S22: 0.5615 S23: -0.5131 REMARK 3 S31: -0.3725 S32: 0.5823 S33: -0.4796 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 5OOO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41684 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 107.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 45.00 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 10000, NACL, HEPES, DTT, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.08667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.17333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.08667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 116.17333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.08667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.17333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 58.08667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 116.17333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 245 REMARK 465 PRO A 246 REMARK 465 ASP A 247 REMARK 465 VAL A 248 REMARK 465 GLY B 79 REMARK 465 CYS B 149 REMARK 465 LYS B 150 REMARK 465 ILE B 151 REMARK 465 THR B 152 REMARK 465 ASN B 153 REMARK 465 ASP B 154 REMARK 465 LEU B 155 REMARK 465 GLU B 156 REMARK 465 ASP B 157 REMARK 465 SER B 158 REMARK 465 PHE B 159 REMARK 465 PRO B 243 REMARK 465 PRO B 244 REMARK 465 ILE B 245 REMARK 465 PRO B 246 REMARK 465 ASP B 247 REMARK 465 VAL B 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 305 O HOH B 305 11656 2.03 REMARK 500 NZ LYS A 150 NZ LYS A 150 10556 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 126 CB SER A 126 OG -0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 154 114.25 -163.08 REMARK 500 ASN A 212 -168.63 -115.49 REMARK 500 LEU A 229 75.20 -163.07 REMARK 500 PRO A 243 128.07 -39.25 REMARK 500 ARG B 147 69.62 -67.05 REMARK 500 ASN B 212 -167.88 -116.67 REMARK 500 LEU B 229 77.73 -166.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 314 DISTANCE = 6.59 ANGSTROMS DBREF 5OOO A 83 248 UNP A2SZX2 A2SZX2_RVFV 83 248 DBREF 5OOO B 83 248 UNP A2SZX2 A2SZX2_RVFV 83 248 SEQADV 5OOO GLY A 79 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO ALA A 80 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO MET A 81 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO VAL A 82 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO GLY B 79 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO ALA B 80 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO MET B 81 UNP A2SZX2 EXPRESSION TAG SEQADV 5OOO VAL B 82 UNP A2SZX2 EXPRESSION TAG SEQRES 1 A 170 GLY ALA MET VAL ALA LYS PRO PHE GLN ARG LEU ILE ASP SEQRES 2 A 170 LEU ILE GLY HIS MET THR LEU SER ASP PHE THR ARG PHE SEQRES 3 A 170 PRO ASN LEU LYS GLU ALA ILE SER TRP PRO LEU GLY GLU SEQRES 4 A 170 PRO SER LEU ALA PHE PHE ASP LEU SER SER THR ARG VAL SEQRES 5 A 170 HIS ARG ASN ASP ASP ILE ARG ARG ASP GLN ILE ALA THR SEQRES 6 A 170 LEU ALA MET ARG SER CYS LYS ILE THR ASN ASP LEU GLU SEQRES 7 A 170 ASP SER PHE VAL GLY LEU HIS ARG MET ILE ALA THR GLU SEQRES 8 A 170 ALA ILE LEU ARG GLY ILE ASP LEU CYS LEU LEU PRO GLY SEQRES 9 A 170 PHE ASP LEU MET TYR GLU VAL ALA HIS VAL GLN CYS VAL SEQRES 10 A 170 ARG LEU LEU GLN ALA ALA LYS GLU ASP ILE SER ASN ALA SEQRES 11 A 170 VAL VAL PRO ASN SER ALA LEU ILE VAL LEU MET GLU GLU SEQRES 12 A 170 SER LEU MET LEU ARG SER SER LEU PRO SER MET MET GLY SEQRES 13 A 170 ARG ASN ASN TRP ILE PRO VAL ILE PRO PRO ILE PRO ASP SEQRES 14 A 170 VAL SEQRES 1 B 170 GLY ALA MET VAL ALA LYS PRO PHE GLN ARG LEU ILE ASP SEQRES 2 B 170 LEU ILE GLY HIS MET THR LEU SER ASP PHE THR ARG PHE SEQRES 3 B 170 PRO ASN LEU LYS GLU ALA ILE SER TRP PRO LEU GLY GLU SEQRES 4 B 170 PRO SER LEU ALA PHE PHE ASP LEU SER SER THR ARG VAL SEQRES 5 B 170 HIS ARG ASN ASP ASP ILE ARG ARG ASP GLN ILE ALA THR SEQRES 6 B 170 LEU ALA MET ARG SER CYS LYS ILE THR ASN ASP LEU GLU SEQRES 7 B 170 ASP SER PHE VAL GLY LEU HIS ARG MET ILE ALA THR GLU SEQRES 8 B 170 ALA ILE LEU ARG GLY ILE ASP LEU CYS LEU LEU PRO GLY SEQRES 9 B 170 PHE ASP LEU MET TYR GLU VAL ALA HIS VAL GLN CYS VAL SEQRES 10 B 170 ARG LEU LEU GLN ALA ALA LYS GLU ASP ILE SER ASN ALA SEQRES 11 B 170 VAL VAL PRO ASN SER ALA LEU ILE VAL LEU MET GLU GLU SEQRES 12 B 170 SER LEU MET LEU ARG SER SER LEU PRO SER MET MET GLY SEQRES 13 B 170 ARG ASN ASN TRP ILE PRO VAL ILE PRO PRO ILE PRO ASP SEQRES 14 B 170 VAL FORMUL 3 HOH *103(H2 O) HELIX 1 AA1 PHE A 86 GLY A 94 1 9 HELIX 2 AA2 THR A 97 ARG A 103 1 7 HELIX 3 AA3 PHE A 104 ILE A 111 1 8 HELIX 4 AA4 LEU A 120 SER A 127 1 8 HELIX 5 AA5 ASN A 133 LYS A 150 1 18 HELIX 6 AA6 ASP A 154 GLY A 174 1 21 HELIX 7 AA7 ASP A 176 LEU A 180 5 5 HELIX 8 AA8 ASP A 184 ASN A 207 1 24 HELIX 9 AA9 ASN A 212 LEU A 229 1 18 HELIX 10 AB1 PRO A 230 GLY A 234 5 5 HELIX 11 AB2 PHE B 86 GLY B 94 1 9 HELIX 12 AB3 THR B 97 ARG B 103 1 7 HELIX 13 AB4 PHE B 104 ILE B 111 1 8 HELIX 14 AB5 LEU B 120 SER B 127 1 8 HELIX 15 AB6 ASN B 133 ARG B 147 1 15 HELIX 16 AB7 GLY B 161 GLY B 174 1 14 HELIX 17 AB8 ASP B 176 LEU B 180 5 5 HELIX 18 AB9 ASP B 184 ASN B 207 1 24 HELIX 19 AC1 ASN B 212 LEU B 229 1 18 HELIX 20 AC2 PRO B 230 GLY B 234 5 5 CISPEP 1 TRP A 113 PRO A 114 0 10.75 CISPEP 2 TRP B 113 PRO B 114 0 5.38 CRYST1 124.500 124.500 174.260 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008032 0.004637 0.000000 0.00000 SCALE2 0.000000 0.009275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005739 0.00000