HEADER HYDROLASE 10-AUG-17 5OPM TITLE CRYSTAL STRUCTURE OF D52N/R238W CN-II MUTANT BOUND TO DATP AND FREE TITLE 2 PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOSOLIC PURINE 5'-NUCLEOTIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOSOLIC 5'-NUCLEOTIDASE II; COMPND 5 EC: 3.1.3.5; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NT5C2, NT5B, NT5CP, PNT5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDASE, RELAPSED LEUKEMIA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.HNIZDA,P.PACHL,P.REZACOVA REVDAT 4 17-JAN-24 5OPM 1 LINK REVDAT 3 16-OCT-19 5OPM 1 REMARK REVDAT 2 20-JUN-18 5OPM 1 JRNL REVDAT 1 13-JUN-18 5OPM 0 JRNL AUTH A.HNIZDA,M.FABRY,T.MORIYAMA,P.PACHL,M.KUGLER,V.BRINSA, JRNL AUTH 2 D.B.ASCHER,W.L.CARROLL,P.NOVAK,M.ZALIOVA,J.TRKA,P.REZACOVA, JRNL AUTH 3 J.J.YANG,V.VEVERKA JRNL TITL RELAPSED ACUTE LYMPHOBLASTIC LEUKEMIA-SPECIFIC MUTATIONS IN JRNL TITL 2 NT5C2 CLUSTER INTO HOTSPOTS DRIVING INTERSUBUNIT JRNL TITL 3 STIMULATION. JRNL REF LEUKEMIA V. 32 1393 2018 JRNL REFN ESSN 1476-5551 JRNL PMID 29535428 JRNL DOI 10.1038/S41375-018-0073-5 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 84931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.400 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5916 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.3430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3825 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 351 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.076 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4025 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3765 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5445 ; 1.481 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8673 ; 3.582 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 481 ; 6.124 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;32.942 ;23.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 692 ;12.599 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;16.577 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 578 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4456 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 986 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7810 35.7940 35.0830 REMARK 3 T TENSOR REMARK 3 T11: 0.3757 T22: 0.3632 REMARK 3 T33: 0.3905 T12: 0.0261 REMARK 3 T13: -0.0334 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 3.6405 L22: 9.1939 REMARK 3 L33: 8.5742 L12: 5.7772 REMARK 3 L13: 0.2844 L23: 0.5386 REMARK 3 S TENSOR REMARK 3 S11: 0.0852 S12: 0.1259 S13: 0.3491 REMARK 3 S21: 0.1398 S22: 0.2538 S23: 0.4752 REMARK 3 S31: -0.5003 S32: -0.0420 S33: -0.3391 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5910 41.4370 31.5190 REMARK 3 T TENSOR REMARK 3 T11: 0.6910 T22: 0.6467 REMARK 3 T33: 0.6799 T12: -0.0369 REMARK 3 T13: -0.0358 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 22.6579 L22: 11.7608 REMARK 3 L33: 0.5038 L12: 15.6270 REMARK 3 L13: -2.5484 L23: -2.2152 REMARK 3 S TENSOR REMARK 3 S11: -0.0464 S12: -0.0333 S13: 1.7615 REMARK 3 S21: 0.1346 S22: -0.0871 S23: 0.4975 REMARK 3 S31: -0.1144 S32: 0.0044 S33: 0.1335 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9520 47.8640 41.8650 REMARK 3 T TENSOR REMARK 3 T11: 0.5111 T22: 0.5827 REMARK 3 T33: 0.6637 T12: -0.0183 REMARK 3 T13: 0.0328 T23: 0.1858 REMARK 3 L TENSOR REMARK 3 L11: 5.3383 L22: 12.9458 REMARK 3 L33: 5.7036 L12: 8.2628 REMARK 3 L13: -3.5002 L23: -5.7038 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: 0.3250 S13: 0.4495 REMARK 3 S21: 0.2465 S22: 0.2837 S23: 0.4692 REMARK 3 S31: -0.6199 S32: 0.0048 S33: -0.3840 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4460 35.9670 53.3790 REMARK 3 T TENSOR REMARK 3 T11: 0.1828 T22: 0.1427 REMARK 3 T33: 0.0702 T12: -0.0650 REMARK 3 T13: 0.0064 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 3.6356 L22: 1.6326 REMARK 3 L33: 1.7600 L12: -1.4480 REMARK 3 L13: -1.2959 L23: 0.8117 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: -0.1091 S13: 0.4085 REMARK 3 S21: -0.0280 S22: -0.0017 S23: -0.2415 REMARK 3 S31: -0.2639 S32: 0.2258 S33: -0.0796 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): -10.7220 19.9690 42.4050 REMARK 3 T TENSOR REMARK 3 T11: 0.1152 T22: 0.1339 REMARK 3 T33: 0.0115 T12: -0.0031 REMARK 3 T13: -0.0197 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.2354 L22: 0.3979 REMARK 3 L33: 0.6816 L12: 0.1822 REMARK 3 L13: -0.2885 L23: -0.0874 REMARK 3 S TENSOR REMARK 3 S11: -0.0582 S12: 0.1554 S13: -0.0107 REMARK 3 S21: -0.0941 S22: 0.0314 S23: 0.0541 REMARK 3 S31: 0.0086 S32: -0.1244 S33: 0.0267 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 151 REMARK 3 ORIGIN FOR THE GROUP (A): -18.9110 20.9320 59.0450 REMARK 3 T TENSOR REMARK 3 T11: 0.1536 T22: 0.1575 REMARK 3 T33: 0.0439 T12: 0.0157 REMARK 3 T13: 0.0001 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.5482 L22: 2.7240 REMARK 3 L33: 7.0975 L12: 1.5081 REMARK 3 L13: -0.8306 L23: 1.5100 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0221 S13: 0.1330 REMARK 3 S21: 0.0667 S22: -0.0537 S23: 0.1937 REMARK 3 S31: -0.0305 S32: -0.2853 S33: 0.0599 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 152 A 186 REMARK 3 ORIGIN FOR THE GROUP (A): -18.7000 15.1940 43.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.0896 T22: 0.1179 REMARK 3 T33: 0.0368 T12: 0.0182 REMARK 3 T13: -0.0109 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 3.3932 L22: 2.4671 REMARK 3 L33: 1.4292 L12: 1.3124 REMARK 3 L13: -0.0951 L23: 0.0902 REMARK 3 S TENSOR REMARK 3 S11: -0.0968 S12: 0.1778 S13: -0.1331 REMARK 3 S21: -0.0303 S22: 0.0813 S23: 0.1855 REMARK 3 S31: 0.0284 S32: -0.1394 S33: 0.0155 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 187 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): -14.1910 7.6330 44.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.1462 REMARK 3 T33: 0.0792 T12: 0.0118 REMARK 3 T13: -0.0208 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 4.6388 L22: 1.7487 REMARK 3 L33: 1.2138 L12: 1.3063 REMARK 3 L13: -2.2902 L23: -0.8255 REMARK 3 S TENSOR REMARK 3 S11: -0.0980 S12: 0.0506 S13: -0.2263 REMARK 3 S21: -0.0454 S22: 0.0349 S23: 0.0525 REMARK 3 S31: 0.0640 S32: 0.0100 S33: 0.0630 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4180 18.7560 29.8290 REMARK 3 T TENSOR REMARK 3 T11: 0.1183 T22: 0.2133 REMARK 3 T33: 0.0400 T12: -0.0040 REMARK 3 T13: 0.0123 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 3.0300 L22: 8.4652 REMARK 3 L33: 1.6816 L12: 2.2584 REMARK 3 L13: -1.3900 L23: -0.7562 REMARK 3 S TENSOR REMARK 3 S11: -0.1452 S12: 0.4242 S13: -0.1923 REMARK 3 S21: -0.2834 S22: 0.1035 S23: -0.0274 REMARK 3 S31: 0.0398 S32: -0.0748 S33: 0.0417 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 230 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6010 32.2310 40.1830 REMARK 3 T TENSOR REMARK 3 T11: 0.1910 T22: 0.1446 REMARK 3 T33: 0.0602 T12: -0.0252 REMARK 3 T13: 0.0517 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 6.9259 L22: 6.2437 REMARK 3 L33: 8.1369 L12: -2.5026 REMARK 3 L13: 4.5836 L23: -4.7917 REMARK 3 S TENSOR REMARK 3 S11: 0.2588 S12: 0.1759 S13: 0.2469 REMARK 3 S21: -0.3836 S22: -0.1877 S23: -0.3115 REMARK 3 S31: 0.0487 S32: 0.2903 S33: -0.0712 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 286 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3080 22.9100 34.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1541 REMARK 3 T33: 0.0171 T12: -0.0174 REMARK 3 T13: 0.0418 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.4387 L22: 0.7219 REMARK 3 L33: 1.6173 L12: 0.5432 REMARK 3 L13: -0.6910 L23: -0.7999 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.1658 S13: 0.0332 REMARK 3 S21: -0.1037 S22: 0.0063 S23: -0.0462 REMARK 3 S31: -0.0144 S32: 0.0487 S33: 0.0086 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 287 A 385 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6750 19.1390 48.5720 REMARK 3 T TENSOR REMARK 3 T11: 0.1085 T22: 0.1306 REMARK 3 T33: 0.0097 T12: -0.0319 REMARK 3 T13: 0.0091 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.2674 L22: 2.6521 REMARK 3 L33: 1.1472 L12: -0.3702 REMARK 3 L13: -0.4147 L23: 0.8037 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: 0.0135 S13: -0.0296 REMARK 3 S21: -0.0846 S22: -0.0053 S23: -0.0854 REMARK 3 S31: 0.0276 S32: 0.0691 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 386 A 421 REMARK 3 ORIGIN FOR THE GROUP (A): -18.9630 46.3630 60.0060 REMARK 3 T TENSOR REMARK 3 T11: 0.5544 T22: 0.3849 REMARK 3 T33: 0.5391 T12: 0.1339 REMARK 3 T13: -0.0576 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 13.6367 L22: 1.7843 REMARK 3 L33: 12.6658 L12: -0.1786 REMARK 3 L13: -10.2214 L23: -1.5544 REMARK 3 S TENSOR REMARK 3 S11: -0.0111 S12: -0.1823 S13: 0.1401 REMARK 3 S21: 0.2274 S22: 0.0149 S23: 0.5182 REMARK 3 S31: -0.7079 S32: -0.3730 S33: -0.0037 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 422 A 477 REMARK 3 ORIGIN FOR THE GROUP (A): -3.0100 35.8550 51.6600 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.0858 REMARK 3 T33: 0.0497 T12: 0.0203 REMARK 3 T13: -0.0191 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 2.9825 L22: 1.5713 REMARK 3 L33: 1.7732 L12: 0.6939 REMARK 3 L13: 0.1082 L23: 0.3259 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: -0.0307 S13: 0.3439 REMARK 3 S21: -0.1204 S22: -0.0219 S23: 0.1813 REMARK 3 S31: -0.2262 S32: -0.1409 S33: 0.0247 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 478 A 488 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2050 41.2320 70.3040 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.2503 REMARK 3 T33: 0.2305 T12: -0.0030 REMARK 3 T13: 0.0484 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 2.6051 L22: 0.1480 REMARK 3 L33: 12.5910 L12: 0.2465 REMARK 3 L13: -5.5674 L23: -0.2356 REMARK 3 S TENSOR REMARK 3 S11: 0.2820 S12: 0.0612 S13: 0.2033 REMARK 3 S21: 0.0149 S22: 0.0868 S23: 0.0280 REMARK 3 S31: -0.6253 S32: 0.0371 S33: -0.3689 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5OPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84931 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.677 REMARK 200 RESOLUTION RANGE LOW (A) : 45.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.64500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5K7Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE/TRIZMA BASE PH 8.5; 0.02 REMARK 280 M OF EACH AMINO ACID; 10% W/V PEG 4000, 20% V/V GLYCEROL H11 REMARK 280 MORPHEUS CONDITION, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.04350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.72700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.47400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.04350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.72700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.47400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.04350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.72700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.47400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.04350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.72700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.47400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 76040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 130.94800 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 130.94800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 409 REMARK 465 LEU A 410 REMARK 465 TYR A 411 REMARK 465 LYS A 412 REMARK 465 HIS A 413 REMARK 465 LEU A 414 REMARK 465 ASP A 415 REMARK 465 SER A 416 REMARK 465 SER A 417 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 888 O HOH A 896 1.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 602 O HOH A 602 3556 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 277 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 53 -62.13 -96.09 REMARK 500 TYR A 55 17.76 58.91 REMARK 500 THR A 56 -70.59 -128.20 REMARK 500 PRO A 267 33.00 -83.68 REMARK 500 ILE A 357 -61.27 -96.22 REMARK 500 PHE A 398 102.35 -57.03 REMARK 500 ILE A 419 -59.78 68.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 54 O REMARK 620 2 ASP A 351 OD1 84.5 REMARK 620 3 PO4 A 501 O2 104.0 171.4 REMARK 620 4 HOH A 627 O 169.6 85.8 85.6 REMARK 620 5 HOH A 654 O 88.3 89.0 92.0 95.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DTP A 504 O2B REMARK 620 2 DTP A 504 O2A 65.1 REMARK 620 3 DTP A 504 O3G 102.8 54.6 REMARK 620 4 DTP A 504 O2B 81.7 106.6 74.7 REMARK 620 5 DTP A 504 O2A 167.2 115.9 70.4 85.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DTP A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OPL RELATED DB: PDB REMARK 900 RELATED ID: 5OPK RELATED DB: PDB DBREF 5OPM A 3 488 UNP P49902 5NTC_HUMAN 3 488 SEQADV 5OPM ASN A 52 UNP P49902 ASP 52 ENGINEERED MUTATION SEQADV 5OPM TRP A 238 UNP P49902 ARG 238 ENGINEERED MUTATION SEQADV 5OPM A UNP P49902 SER 409 DELETION SEQADV 5OPM A UNP P49902 SER 410 DELETION SEQADV 5OPM A UNP P49902 ASN 411 DELETION SEQADV 5OPM A UNP P49902 GLU 412 DELETION SEQADV 5OPM A UNP P49902 ARG 413 DELETION SEQADV 5OPM A UNP P49902 PRO 414 DELETION SEQADV 5OPM A UNP P49902 ASP 415 DELETION SEQADV 5OPM A UNP P49902 ILE 416 DELETION SEQRES 1 A 478 THR SER TRP SER ASP ARG LEU GLN ASN ALA ALA ASP MET SEQRES 2 A 478 PRO ALA ASN MET ASP LYS HIS ALA LEU LYS LYS TYR ARG SEQRES 3 A 478 ARG GLU ALA TYR HIS ARG VAL PHE VAL ASN ARG SER LEU SEQRES 4 A 478 ALA MET GLU LYS ILE LYS CYS PHE GLY PHE ASN MET ASP SEQRES 5 A 478 TYR THR LEU ALA VAL TYR LYS SER PRO GLU TYR GLU SER SEQRES 6 A 478 LEU GLY PHE GLU LEU THR VAL GLU ARG LEU VAL SER ILE SEQRES 7 A 478 GLY TYR PRO GLN GLU LEU LEU SER PHE ALA TYR ASP SER SEQRES 8 A 478 THR PHE PRO THR ARG GLY LEU VAL PHE ASP THR LEU TYR SEQRES 9 A 478 GLY ASN LEU LEU LYS VAL ASP ALA TYR GLY ASN LEU LEU SEQRES 10 A 478 VAL CYS ALA HIS GLY PHE ASN PHE ILE ARG GLY PRO GLU SEQRES 11 A 478 THR ARG GLU GLN TYR PRO ASN LYS PHE ILE GLN ARG ASP SEQRES 12 A 478 ASP THR GLU ARG PHE TYR ILE LEU ASN THR LEU PHE ASN SEQRES 13 A 478 LEU PRO GLU THR TYR LEU LEU ALA CYS LEU VAL ASP PHE SEQRES 14 A 478 PHE THR ASN CYS PRO ARG TYR THR SER CYS GLU THR GLY SEQRES 15 A 478 PHE LYS ASP GLY ASP LEU PHE MET SER TYR ARG SER MET SEQRES 16 A 478 PHE GLN ASP VAL ARG ASP ALA VAL ASP TRP VAL HIS TYR SEQRES 17 A 478 LYS GLY SER LEU LYS GLU LYS THR VAL GLU ASN LEU GLU SEQRES 18 A 478 LYS TYR VAL VAL LYS ASP GLY LYS LEU PRO LEU LEU LEU SEQRES 19 A 478 SER TRP MET LYS GLU VAL GLY LYS VAL PHE LEU ALA THR SEQRES 20 A 478 ASN SER ASP TYR LYS TYR THR ASP LYS ILE MET THR TYR SEQRES 21 A 478 LEU PHE ASP PHE PRO HIS GLY PRO LYS PRO GLY SER SER SEQRES 22 A 478 HIS ARG PRO TRP GLN SER TYR PHE ASP LEU ILE LEU VAL SEQRES 23 A 478 ASP ALA ARG LYS PRO LEU PHE PHE GLY GLU GLY THR VAL SEQRES 24 A 478 LEU ARG GLN VAL ASP THR LYS THR GLY LYS LEU LYS ILE SEQRES 25 A 478 GLY THR TYR THR GLY PRO LEU GLN HIS GLY ILE VAL TYR SEQRES 26 A 478 SER GLY GLY SER SER ASP THR ILE CYS ASP LEU LEU GLY SEQRES 27 A 478 ALA LYS GLY LYS ASP ILE LEU TYR ILE GLY ASP HIS ILE SEQRES 28 A 478 PHE GLY ASP ILE LEU LYS SER LYS LYS ARG GLN GLY TRP SEQRES 29 A 478 ARG THR PHE LEU VAL ILE PRO GLU LEU ALA GLN GLU LEU SEQRES 30 A 478 HIS VAL TRP THR ASP LYS SER SER LEU PHE GLU GLU LEU SEQRES 31 A 478 GLN SER LEU ASP ILE PHE LEU ALA GLU LEU TYR LYS HIS SEQRES 32 A 478 LEU ASP SER SER SER ILE GLN ARG ARG ILE LYS LYS VAL SEQRES 33 A 478 THR HIS ASP MET ASP MET CYS TYR GLY MET MET GLY SER SEQRES 34 A 478 LEU PHE ARG SER GLY SER ARG GLN THR LEU PHE ALA SER SEQRES 35 A 478 GLN VAL MET ARG TYR ALA ASP LEU TYR ALA ALA SER PHE SEQRES 36 A 478 ILE ASN LEU LEU TYR TYR PRO PHE SER TYR LEU PHE ARG SEQRES 37 A 478 ALA ALA HIS VAL LEU MET PRO HIS GLU SER HET PO4 A 501 5 HET MG A 502 1 HET MG A 503 1 HET DTP A 504 30 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HET GOL A 508 6 HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PO4 O4 P 3- FORMUL 3 MG 2(MG 2+) FORMUL 5 DTP C10 H16 N5 O12 P3 FORMUL 6 GOL 4(C3 H8 O3) FORMUL 10 HOH *351(H2 O) HELIX 1 AA1 SER A 4 ASP A 14 1 11 HELIX 2 AA2 ASP A 20 ARG A 28 1 9 HELIX 3 AA3 ARG A 29 ARG A 34 5 6 HELIX 4 AA4 GLU A 44 ILE A 46 5 3 HELIX 5 AA5 PRO A 63 ILE A 80 1 18 HELIX 6 AA6 PRO A 83 PHE A 89 5 7 HELIX 7 AA7 ARG A 129 ARG A 134 1 6 HELIX 8 AA8 THR A 155 PHE A 157 5 3 HELIX 9 AA9 ASN A 158 CYS A 175 1 18 HELIX 10 AB1 TYR A 194 LYS A 211 1 18 HELIX 11 AB2 SER A 213 ASN A 221 1 9 HELIX 12 AB3 ASN A 221 VAL A 226 1 6 HELIX 13 AB4 GLY A 230 GLY A 243 1 14 HELIX 14 AB5 ASP A 252 PHE A 264 1 13 HELIX 15 AB6 PRO A 278 PHE A 283 5 6 HELIX 16 AB7 PRO A 293 GLY A 297 5 5 HELIX 17 AB8 SER A 331 GLY A 340 1 10 HELIX 18 AB9 LYS A 342 LYS A 344 5 3 HELIX 19 AC1 ASP A 356 GLY A 365 1 10 HELIX 20 AC2 GLU A 374 LYS A 385 1 12 HELIX 21 AC3 LYS A 385 PHE A 398 1 14 HELIX 22 AC4 ILE A 419 CYS A 433 1 15 HELIX 23 AC5 THR A 448 ALA A 458 1 11 HELIX 24 AC6 SER A 464 TYR A 471 5 8 HELIX 25 AC7 MET A 484 SER A 488 5 5 SHEET 1 AA1 9 PHE A 36 VAL A 37 0 SHEET 2 AA1 9 LEU A 460 ALA A 462 -1 O TYR A 461 N PHE A 36 SHEET 3 AA1 9 ARG A 367 VAL A 371 1 N LEU A 370 O LEU A 460 SHEET 4 AA1 9 ILE A 346 GLY A 350 1 N TYR A 348 O ARG A 367 SHEET 5 AA1 9 CYS A 48 PHE A 51 1 N GLY A 50 O ILE A 349 SHEET 6 AA1 9 LYS A 244 ALA A 248 1 O ALA A 248 N PHE A 51 SHEET 7 AA1 9 LEU A 285 VAL A 288 1 O LEU A 287 N LEU A 247 SHEET 8 AA1 9 TYR A 327 GLY A 329 1 O TYR A 327 N ILE A 286 SHEET 9 AA1 9 LEU A 302 GLN A 304 -1 N ARG A 303 O SER A 328 SHEET 1 AA2 2 LEU A 41 ALA A 42 0 SHEET 2 AA2 2 LEU A 476 PHE A 477 -1 O PHE A 477 N LEU A 41 SHEET 1 AA3 5 ASN A 126 PHE A 127 0 SHEET 2 AA3 5 LEU A 118 HIS A 123 -1 N HIS A 123 O ASN A 126 SHEET 3 AA3 5 ASN A 108 VAL A 112 -1 N LYS A 111 O LEU A 119 SHEET 4 AA3 5 VAL A 101 ASP A 103 -1 N ASP A 103 O ASN A 108 SHEET 5 AA3 5 PHE A 150 ILE A 152 -1 O TYR A 151 N PHE A 102 SHEET 1 AA4 3 THR A 179 CYS A 181 0 SHEET 2 AA4 3 GLY A 184 ASP A 187 -1 O GLY A 184 N CYS A 181 SHEET 3 AA4 3 LEU A 190 SER A 193 -1 O LEU A 190 N ASP A 187 SHEET 1 AA5 2 ARG A 442 SER A 443 0 SHEET 2 AA5 2 ARG A 446 GLN A 447 -1 O ARG A 446 N SER A 443 LINK O ASP A 54 MG MG A 502 1555 1555 2.11 LINK OD1 ASP A 351 MG MG A 502 1555 1555 2.14 LINK O2 PO4 A 501 MG MG A 502 1555 1555 1.93 LINK MG MG A 502 O HOH A 627 1555 1555 2.14 LINK MG MG A 502 O HOH A 654 1555 1555 2.14 LINK MG MG A 503 O2B DTP A 504 1555 1555 2.15 LINK MG MG A 503 O2A DTP A 504 1555 1555 2.98 LINK MG MG A 503 O3G DTP A 504 1555 3556 2.68 LINK MG MG A 503 O2B DTP A 504 1555 3556 2.15 LINK MG MG A 503 O2A DTP A 504 1555 3556 2.02 CISPEP 1 SER A 62 PRO A 63 0 6.05 CISPEP 2 LYS A 292 PRO A 293 0 12.30 SITE 1 AC1 12 ASN A 52 MET A 53 ASP A 54 THR A 249 SITE 2 AC1 12 ASN A 250 SER A 251 LYS A 292 MG A 502 SITE 3 AC1 12 HOH A 627 HOH A 654 HOH A 715 HOH A 806 SITE 1 AC2 6 ASN A 52 ASP A 54 ASP A 351 PO4 A 501 SITE 2 AC2 6 HOH A 627 HOH A 654 SITE 1 AC3 2 LYS A 362 DTP A 504 SITE 1 AC4 13 ARG A 144 ASP A 145 ASN A 154 PHE A 354 SITE 2 AC4 13 LEU A 358 LYS A 362 GLN A 453 ARG A 456 SITE 3 AC4 13 TYR A 457 MG A 503 HOH A 608 HOH A 662 SITE 4 AC4 13 HOH A 796 SITE 1 AC5 6 ARG A 34 VAL A 35 VAL A 37 TYR A 475 SITE 2 AC5 6 ARG A 478 HOH A 825 SITE 1 AC6 8 PHE A 157 ARG A 202 VAL A 205 ASP A 206 SITE 2 AC6 8 TYR A 210 HOH A 666 HOH A 675 HOH A 726 SITE 1 AC7 4 LEU A 119 THR A 427 SER A 443 ARG A 446 SITE 1 AC8 11 ASP A 54 TYR A 65 PHE A 157 HIS A 209 SITE 2 AC8 11 TYR A 210 LYS A 215 SER A 251 TYR A 255 SITE 3 AC8 11 HOH A 609 HOH A 647 HOH A 726 CRYST1 92.087 127.454 130.948 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007637 0.00000