HEADER TRANSFERASE 14-AUG-17 5OQU TITLE THE CRYSTAL STRUCTURE OF CK2ALPHA IN COMPLEX WITH COMPOUND 5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: RESIDUES 2-329 AND N-TERMINAL EXTENSION COMPND 5 GSMDIEFDDDADDDGSGSGSGSGS; COMPND 6 SYNONYM: CK II ALPHA; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSNK2A1, CK2A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHAT4 KEYWDS CK2ALPHA, CK2A, FRAGMENT BASED DRUG DISCOVERY, HIGH CONCENTRATION KEYWDS 2 SCREENING, SELECTIVE ATP COMPETITIVE INHIBITORS, SURFACE ENTROPHY KEYWDS 3 REDUCTION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.BREAR,C.DE FUSCO,J.IEGRE,M.YOSHIDA,S.MITCHELL,M.ROSSMANN,L.CARRO, AUTHOR 2 H.SORE,M.HYVONEN,D.SPRING REVDAT 4 17-JAN-24 5OQU 1 REMARK REVDAT 3 07-OCT-20 5OQU 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 HETSYN ATOM REVDAT 2 16-MAY-18 5OQU 1 JRNL REVDAT 1 28-FEB-18 5OQU 0 JRNL AUTH J.IEGRE,P.BREAR,C.DE FUSCO,M.YOSHIDA,S.L.MITCHELL, JRNL AUTH 2 M.ROSSMANN,L.CARRO,H.F.SORE,M.HYVONEN,D.R.SPRING JRNL TITL SECOND-GENERATION CK2 ALPHA INHIBITORS TARGETING THE ALPHA D JRNL TITL 2 POCKET. JRNL REF CHEM SCI V. 9 3041 2018 JRNL REFN ISSN 2041-6520 JRNL PMID 29732088 JRNL DOI 10.1039/C7SC05122K REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 166.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 32179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1601 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.38 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2749 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2569 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2619 REMARK 3 BIN R VALUE (WORKING SET) : 0.2543 REMARK 3 BIN FREE R VALUE : 0.3121 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.73 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 130 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.58400 REMARK 3 B22 (A**2) : -23.47280 REMARK 3 B33 (A**2) : 21.88880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.345 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.381 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.232 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.396 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.237 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5831 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7914 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2079 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 144 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 879 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5831 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 697 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6443 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.79 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.68 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006216. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32253 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.324 REMARK 200 RESOLUTION RANGE LOW (A) : 332.804 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.84400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CVH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 112.5MM MES PH 6.5, 35% GLYCEROL REMARK 280 ETHOXYLATE, 180 MM AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 166.40200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 166.40200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.33400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.96100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.33400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.96100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 166.40200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.33400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.96100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 166.40200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.33400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 33.96100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -22 REMARK 465 SER B -21 REMARK 465 MET B -20 REMARK 465 ASP B -19 REMARK 465 ILE B -18 REMARK 465 GLU B -17 REMARK 465 PHE B -16 REMARK 465 ASP B -15 REMARK 465 ASP B -14 REMARK 465 ASP B -13 REMARK 465 ALA B -12 REMARK 465 ASP B -11 REMARK 465 ASP B -10 REMARK 465 ASP B -9 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 GLY B -6 REMARK 465 SER B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 VAL B 328 REMARK 465 LYS B 329 REMARK 465 GLY A -22 REMARK 465 SER A -21 REMARK 465 MET A -20 REMARK 465 ASP A -19 REMARK 465 ILE A -18 REMARK 465 GLU A -17 REMARK 465 PHE A -16 REMARK 465 ASP A -15 REMARK 465 ASP A -14 REMARK 465 ASP A -13 REMARK 465 ALA A -12 REMARK 465 ASP A -11 REMARK 465 ASP A -10 REMARK 465 ASP A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 VAL A 328 REMARK 465 LYS A 329 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 229 O33 IHP A 408 4597 1.52 REMARK 500 CE LYS A 229 O33 IHP A 408 4597 2.02 REMARK 500 ND1 HIS A 234 O34 IHP A 408 4597 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 18 31.44 -86.16 REMARK 500 HIS B 18 31.44 -86.16 REMARK 500 VAL B 42 -66.69 -104.64 REMARK 500 LYS B 49 99.74 -68.88 REMARK 500 PRO B 72 96.53 -60.12 REMARK 500 VAL B 73 -167.97 -106.01 REMARK 500 LYS B 74 123.46 -39.46 REMARK 500 ASP B 156 36.03 -152.58 REMARK 500 ASP B 175 78.62 52.49 REMARK 500 ALA B 193 165.52 66.11 REMARK 500 ALA B 193 164.69 66.11 REMARK 500 ASP B 210 -156.72 -126.85 REMARK 500 PRO B 267 -14.47 -45.89 REMARK 500 VAL A 42 -60.04 -104.40 REMARK 500 ARG A 47 87.44 -160.56 REMARK 500 PRO A 72 95.25 -59.38 REMARK 500 VAL A 73 -168.77 -105.76 REMARK 500 LYS A 74 123.11 -38.09 REMARK 500 ASP A 156 37.32 -150.85 REMARK 500 ASP A 175 75.10 53.56 REMARK 500 ALA A 193 165.90 63.73 REMARK 500 ALA A 193 165.09 63.73 REMARK 500 ASP A 210 -155.53 -127.33 REMARK 500 PRO A 267 -11.67 -46.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 161 OD1 REMARK 620 2 ASP A 175 OD2 75.2 REMARK 620 3 ADP A 401 O1B 167.4 94.8 REMARK 620 4 ADP A 401 O1A 88.9 83.7 82.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A4B A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 409 DBREF 5OQU B 2 329 UNP P68400 CSK21_HUMAN 2 329 DBREF 5OQU A 2 329 UNP P68400 CSK21_HUMAN 2 329 SEQADV 5OQU GLY B -22 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B -21 UNP P68400 EXPRESSION TAG SEQADV 5OQU MET B -20 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -19 UNP P68400 EXPRESSION TAG SEQADV 5OQU ILE B -18 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLU B -17 UNP P68400 EXPRESSION TAG SEQADV 5OQU PHE B -16 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -15 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -14 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -13 UNP P68400 EXPRESSION TAG SEQADV 5OQU ALA B -12 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -11 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -10 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP B -9 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY B -8 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B -7 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY B -6 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B -5 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY B -4 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B -3 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY B -2 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B -1 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY B 0 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B 1 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER B 21 UNP P68400 ARG 21 ENGINEERED MUTATION SEQADV 5OQU GLY A -22 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A -21 UNP P68400 EXPRESSION TAG SEQADV 5OQU MET A -20 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -19 UNP P68400 EXPRESSION TAG SEQADV 5OQU ILE A -18 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLU A -17 UNP P68400 EXPRESSION TAG SEQADV 5OQU PHE A -16 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -15 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -14 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -13 UNP P68400 EXPRESSION TAG SEQADV 5OQU ALA A -12 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -11 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -10 UNP P68400 EXPRESSION TAG SEQADV 5OQU ASP A -9 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY A -8 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A -7 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY A -6 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A -5 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY A -4 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A -3 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY A -2 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A -1 UNP P68400 EXPRESSION TAG SEQADV 5OQU GLY A 0 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A 1 UNP P68400 EXPRESSION TAG SEQADV 5OQU SER A 21 UNP P68400 ARG 21 ENGINEERED MUTATION SEQRES 1 B 352 GLY SER MET ASP ILE GLU PHE ASP ASP ASP ALA ASP ASP SEQRES 2 B 352 ASP GLY SER GLY SER GLY SER GLY SER GLY SER SER GLY SEQRES 3 B 352 PRO VAL PRO SER ARG ALA ARG VAL TYR THR ASP VAL ASN SEQRES 4 B 352 THR HIS ARG PRO SER GLU TYR TRP ASP TYR GLU SER HIS SEQRES 5 B 352 VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR GLN LEU VAL SEQRES 6 B 352 ARG LYS LEU GLY ARG GLY LYS TYR SER GLU VAL PHE GLU SEQRES 7 B 352 ALA ILE ASN ILE THR ASN ASN GLU LYS VAL VAL VAL LYS SEQRES 8 B 352 ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE LYS ARG GLU SEQRES 9 B 352 ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY PRO ASN ILE SEQRES 10 B 352 ILE THR LEU ALA ASP ILE VAL LYS ASP PRO VAL SER ARG SEQRES 11 B 352 THR PRO ALA LEU VAL PHE GLU HIS VAL ASN ASN THR ASP SEQRES 12 B 352 PHE LYS GLN LEU TYR GLN THR LEU THR ASP TYR ASP ILE SEQRES 13 B 352 ARG PHE TYR MET TYR GLU ILE LEU LYS ALA LEU ASP TYR SEQRES 14 B 352 CYS HIS SER MET GLY ILE MET HIS ARG ASP VAL LYS PRO SEQRES 15 B 352 HIS ASN VAL MET ILE ASP HIS GLU HIS ARG LYS LEU ARG SEQRES 16 B 352 LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR HIS PRO GLY SEQRES 17 B 352 GLN GLU TYR ASN VAL ARG VAL ALA SER ARG TYR PHE LYS SEQRES 18 B 352 GLY PRO GLU LEU LEU VAL ASP TYR GLN MET TYR ASP TYR SEQRES 19 B 352 SER LEU ASP MET TRP SER LEU GLY CYS MET LEU ALA SER SEQRES 20 B 352 MET ILE PHE ARG LYS GLU PRO PHE PHE HIS GLY HIS ASP SEQRES 21 B 352 ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS VAL LEU GLY SEQRES 22 B 352 THR GLU ASP LEU TYR ASP TYR ILE ASP LYS TYR ASN ILE SEQRES 23 B 352 GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU GLY ARG HIS SEQRES 24 B 352 SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SER GLU ASN SEQRES 25 B 352 GLN HIS LEU VAL SER PRO GLU ALA LEU ASP PHE LEU ASP SEQRES 26 B 352 LYS LEU LEU ARG TYR ASP HIS GLN SER ARG LEU THR ALA SEQRES 27 B 352 ARG GLU ALA MET GLU HIS PRO TYR PHE TYR THR VAL VAL SEQRES 28 B 352 LYS SEQRES 1 A 352 GLY SER MET ASP ILE GLU PHE ASP ASP ASP ALA ASP ASP SEQRES 2 A 352 ASP GLY SER GLY SER GLY SER GLY SER GLY SER SER GLY SEQRES 3 A 352 PRO VAL PRO SER ARG ALA ARG VAL TYR THR ASP VAL ASN SEQRES 4 A 352 THR HIS ARG PRO SER GLU TYR TRP ASP TYR GLU SER HIS SEQRES 5 A 352 VAL VAL GLU TRP GLY ASN GLN ASP ASP TYR GLN LEU VAL SEQRES 6 A 352 ARG LYS LEU GLY ARG GLY LYS TYR SER GLU VAL PHE GLU SEQRES 7 A 352 ALA ILE ASN ILE THR ASN ASN GLU LYS VAL VAL VAL LYS SEQRES 8 A 352 ILE LEU LYS PRO VAL LYS LYS LYS LYS ILE LYS ARG GLU SEQRES 9 A 352 ILE LYS ILE LEU GLU ASN LEU ARG GLY GLY PRO ASN ILE SEQRES 10 A 352 ILE THR LEU ALA ASP ILE VAL LYS ASP PRO VAL SER ARG SEQRES 11 A 352 THR PRO ALA LEU VAL PHE GLU HIS VAL ASN ASN THR ASP SEQRES 12 A 352 PHE LYS GLN LEU TYR GLN THR LEU THR ASP TYR ASP ILE SEQRES 13 A 352 ARG PHE TYR MET TYR GLU ILE LEU LYS ALA LEU ASP TYR SEQRES 14 A 352 CYS HIS SER MET GLY ILE MET HIS ARG ASP VAL LYS PRO SEQRES 15 A 352 HIS ASN VAL MET ILE ASP HIS GLU HIS ARG LYS LEU ARG SEQRES 16 A 352 LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR HIS PRO GLY SEQRES 17 A 352 GLN GLU TYR ASN VAL ARG VAL ALA SER ARG TYR PHE LYS SEQRES 18 A 352 GLY PRO GLU LEU LEU VAL ASP TYR GLN MET TYR ASP TYR SEQRES 19 A 352 SER LEU ASP MET TRP SER LEU GLY CYS MET LEU ALA SER SEQRES 20 A 352 MET ILE PHE ARG LYS GLU PRO PHE PHE HIS GLY HIS ASP SEQRES 21 A 352 ASN TYR ASP GLN LEU VAL ARG ILE ALA LYS VAL LEU GLY SEQRES 22 A 352 THR GLU ASP LEU TYR ASP TYR ILE ASP LYS TYR ASN ILE SEQRES 23 A 352 GLU LEU ASP PRO ARG PHE ASN ASP ILE LEU GLY ARG HIS SEQRES 24 A 352 SER ARG LYS ARG TRP GLU ARG PHE VAL HIS SER GLU ASN SEQRES 25 A 352 GLN HIS LEU VAL SER PRO GLU ALA LEU ASP PHE LEU ASP SEQRES 26 A 352 LYS LEU LEU ARG TYR ASP HIS GLN SER ARG LEU THR ALA SEQRES 27 A 352 ARG GLU ALA MET GLU HIS PRO TYR PHE TYR THR VAL VAL SEQRES 28 A 352 LYS HET ADP B 401 27 HET ACT B 402 4 HET ACT B 403 4 HET ADP A 401 27 HET A4B A 402 17 HET MG A 403 1 HET MG A 404 1 HET ACT A 405 4 HET ACT A 406 4 HET ACT A 407 4 HET IHP A 408 36 HET CL A 409 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ACT ACETATE ION HETNAM A4B [3-CHLORANYL-4-(2-METHOXYPHENYL)PHENYL]METHANAMINE HETNAM MG MAGNESIUM ION HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETNAM CL CHLORIDE ION HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 ACT 5(C2 H3 O2 1-) FORMUL 7 A4B C14 H14 CL N O FORMUL 8 MG 2(MG 2+) FORMUL 13 IHP C6 H18 O24 P6 FORMUL 14 CL CL 1- FORMUL 15 HOH *15(H2 O) HELIX 1 AA1 PRO B 20 ASP B 25 1 6 HELIX 2 AA2 LYS B 74 ARG B 89 1 16 HELIX 3 AA3 ASP B 120 LEU B 128 1 9 HELIX 4 AA4 THR B 129 MET B 150 1 22 HELIX 5 AA5 LYS B 158 HIS B 160 5 3 HELIX 6 AA6 SER B 194 LYS B 198 5 5 HELIX 7 AA7 GLY B 199 VAL B 204 1 6 HELIX 8 AA8 TYR B 211 ARG B 228 1 18 HELIX 9 AA9 ASP B 237 GLY B 250 1 14 HELIX 10 AB1 GLY B 250 TYR B 261 1 12 HELIX 11 AB2 PHE B 269 GLY B 274 1 6 HELIX 12 AB3 ARG B 280 VAL B 285 5 6 HELIX 13 AB4 SER B 294 LEU B 305 1 12 HELIX 14 AB5 THR B 314 GLU B 320 1 7 HELIX 15 AB6 HIS B 321 TYR B 325 5 5 HELIX 16 AB7 PRO A 20 ASP A 25 1 6 HELIX 17 AB8 LYS A 74 ARG A 89 1 16 HELIX 18 AB9 ASP A 120 LEU A 128 1 9 HELIX 19 AC1 THR A 129 MET A 150 1 22 HELIX 20 AC2 LYS A 158 HIS A 160 5 3 HELIX 21 AC3 SER A 194 LYS A 198 5 5 HELIX 22 AC4 GLY A 199 VAL A 204 1 6 HELIX 23 AC5 TYR A 211 ARG A 228 1 18 HELIX 24 AC6 ASP A 237 GLY A 250 1 14 HELIX 25 AC7 GLY A 250 TYR A 261 1 12 HELIX 26 AC8 PHE A 269 GLY A 274 1 6 HELIX 27 AC9 ARG A 280 VAL A 285 5 6 HELIX 28 AD1 SER A 294 LEU A 305 1 12 HELIX 29 AD2 THR A 314 GLU A 320 1 7 HELIX 30 AD3 HIS A 321 TYR A 325 5 5 SHEET 1 AA1 6 GLY B 34 ASN B 35 0 SHEET 2 AA1 6 LEU B 97 LYS B 102 1 O ILE B 100 N GLY B 34 SHEET 3 AA1 6 PRO B 109 GLU B 114 -1 O VAL B 112 N ALA B 98 SHEET 4 AA1 6 LYS B 64 LEU B 70 -1 N LYS B 68 O LEU B 111 SHEET 5 AA1 6 SER B 51 ASN B 58 -1 N ALA B 56 O VAL B 65 SHEET 6 AA1 6 TYR B 39 LYS B 44 -1 N VAL B 42 O GLU B 55 SHEET 1 AA2 2 ILE B 152 MET B 153 0 SHEET 2 AA2 2 GLU B 180 PHE B 181 -1 O GLU B 180 N MET B 153 SHEET 1 AA3 2 VAL B 162 ASP B 165 0 SHEET 2 AA3 2 LYS B 170 LEU B 173 -1 O ARG B 172 N MET B 163 SHEET 1 AA4 6 GLY A 34 ASN A 35 0 SHEET 2 AA4 6 LEU A 97 LYS A 102 1 O ILE A 100 N GLY A 34 SHEET 3 AA4 6 PRO A 109 GLU A 114 -1 O VAL A 112 N ALA A 98 SHEET 4 AA4 6 GLU A 63 LEU A 70 -1 N LYS A 68 O LEU A 111 SHEET 5 AA4 6 SER A 51 ASN A 58 -1 N ASN A 58 O GLU A 63 SHEET 6 AA4 6 TYR A 39 ARG A 47 -1 N LEU A 45 O VAL A 53 SHEET 1 AA5 2 ILE A 152 MET A 153 0 SHEET 2 AA5 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 AA6 2 VAL A 162 ASP A 165 0 SHEET 2 AA6 2 LYS A 170 LEU A 173 -1 O ARG A 172 N MET A 163 LINK OD1 ASN A 161 MG MG A 403 1555 1555 2.60 LINK OD2 ASP A 175 MG MG A 403 1555 1555 2.34 LINK O1B ADP A 401 MG MG A 403 1555 1555 2.68 LINK O1A ADP A 401 MG MG A 403 1555 1555 2.13 LINK O2A ADP A 401 MG MG A 404 1555 1555 2.58 CISPEP 1 GLU B 230 PRO B 231 0 -5.89 CISPEP 2 GLU A 230 PRO A 231 0 -6.30 SITE 1 AC1 14 ARG B 47 GLY B 48 LYS B 49 SER B 51 SITE 2 AC1 14 VAL B 53 VAL B 66 LYS B 68 ILE B 95 SITE 3 AC1 14 GLU B 114 VAL B 116 ASN B 161 MET B 163 SITE 4 AC1 14 ILE B 174 ASP B 175 SITE 1 AC2 6 ARG B 195 TYR B 196 HIS B 234 GLY B 235 SITE 2 AC2 6 HIS B 236 LYS B 247 SITE 1 AC3 3 ARG B 80 ARG B 155 ASN B 189 SITE 1 AC4 14 GLY A 48 SER A 51 VAL A 53 VAL A 66 SITE 2 AC4 14 LYS A 68 ILE A 95 GLU A 114 VAL A 116 SITE 3 AC4 14 HIS A 160 ASN A 161 MET A 163 ASP A 175 SITE 4 AC4 14 MG A 403 MG A 404 SITE 1 AC5 8 ASN A 118 LEU A 124 PRO A 159 VAL A 162 SITE 2 AC5 8 MET A 221 SER A 224 MET A 225 CL A 409 SITE 1 AC6 3 ASN A 161 ASP A 175 ADP A 401 SITE 1 AC7 2 ASP A 175 ADP A 401 SITE 1 AC8 2 ARG A 244 LYS A 247 SITE 1 AC9 5 ARG A 80 ARG A 155 TYR A 188 ASN A 189 SITE 2 AC9 5 HOH A 505 SITE 1 AD1 3 HIS A 276 SER A 277 LYS A 279 SITE 1 AD2 4 LYS A 229 HIS A 234 HIS A 236 HOH A 501 SITE 1 AD3 3 ASN A 118 HIS A 160 A4B A 402 CRYST1 64.668 67.922 332.804 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015464 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014723 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003005 0.00000