HEADER TRANSFERASE 16-AUG-17 5ORO TITLE CRYSTAL STRUCTURE OF AURORA-A KINASE IN COMPLEX WITH AN ALLOSTERICALLY TITLE 2 BINDING FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, ALLOSTERIC INHIBITOR, FRAGMENT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.MCINTYRE,P.M.COLLINS,F.VON DELFT,R.BAYLISS REVDAT 3 16-OCT-19 5ORO 1 REMARK REVDAT 2 29-NOV-17 5ORO 1 JRNL REVDAT 1 01-NOV-17 5ORO 0 JRNL AUTH P.J.MCINTYRE,P.M.COLLINS,L.VRZAL,K.BIRCHALL,L.H.ARNOLD, JRNL AUTH 2 C.MPAMHANGA,P.J.COOMBS,S.G.BURGESS,M.W.RICHARDS,A.WINTER, JRNL AUTH 3 V.VEVERKA,F.V.DELFT,A.MERRITT,R.BAYLISS JRNL TITL CHARACTERIZATION OF THREE DRUGGABLE HOT-SPOTS IN THE JRNL TITL 2 AURORA-A/TPX2 INTERACTION USING BIOCHEMICAL, BIOPHYSICAL, JRNL TITL 3 AND FRAGMENT-BASED APPROACHES. JRNL REF ACS CHEM. BIOL. V. 12 2906 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 29045126 JRNL DOI 10.1021/ACSCHEMBIO.7B00537 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 19847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2358 22.0370 -11.8233 REMARK 3 T TENSOR REMARK 3 T11: 0.4064 T22: 0.3652 REMARK 3 T33: 0.4358 T12: -0.0218 REMARK 3 T13: -0.0133 T23: -0.1667 REMARK 3 L TENSOR REMARK 3 L11: 0.6979 L22: 0.5410 REMARK 3 L33: 0.3591 L12: -0.0332 REMARK 3 L13: 0.3954 L23: -0.2991 REMARK 3 S TENSOR REMARK 3 S11: 0.0596 S12: 0.2392 S13: -0.4257 REMARK 3 S21: -0.0523 S22: 0.0830 S23: -0.1656 REMARK 3 S31: 0.1717 S32: 0.2175 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2297 20.1510 -16.8237 REMARK 3 T TENSOR REMARK 3 T11: 0.5767 T22: 0.5688 REMARK 3 T33: 0.6192 T12: -0.0618 REMARK 3 T13: -0.0097 T23: -0.2692 REMARK 3 L TENSOR REMARK 3 L11: 1.1473 L22: 0.0523 REMARK 3 L33: 0.6370 L12: 0.2257 REMARK 3 L13: -0.5069 L23: -0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.2317 S12: 0.2903 S13: -1.0375 REMARK 3 S21: -0.8330 S22: -0.1574 S23: -0.1776 REMARK 3 S31: -0.2312 S32: -0.6397 S33: -0.0577 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4402 33.0530 -10.9973 REMARK 3 T TENSOR REMARK 3 T11: 0.4022 T22: 0.4201 REMARK 3 T33: 0.3467 T12: -0.0287 REMARK 3 T13: -0.0294 T23: -0.0638 REMARK 3 L TENSOR REMARK 3 L11: 2.3713 L22: 1.3643 REMARK 3 L33: 0.2005 L12: -0.3659 REMARK 3 L13: -0.4616 L23: 0.4052 REMARK 3 S TENSOR REMARK 3 S11: -0.0567 S12: 0.2548 S13: -0.0434 REMARK 3 S21: -0.0827 S22: 0.1309 S23: -0.0017 REMARK 3 S31: -0.0459 S32: -0.0140 S33: -0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 289 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7649 32.2661 -3.7511 REMARK 3 T TENSOR REMARK 3 T11: 0.4100 T22: 0.4181 REMARK 3 T33: 0.3909 T12: -0.0756 REMARK 3 T13: -0.0378 T23: -0.0757 REMARK 3 L TENSOR REMARK 3 L11: 0.3823 L22: 0.3420 REMARK 3 L33: 0.4118 L12: -0.1781 REMARK 3 L13: 0.2822 L23: -0.0485 REMARK 3 S TENSOR REMARK 3 S11: 0.0491 S12: 0.2720 S13: 0.1022 REMARK 3 S21: 0.0649 S22: 0.0111 S23: 0.2204 REMARK 3 S31: 0.1675 S32: -0.3231 S33: 0.0019 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.2485 30.6414 7.8354 REMARK 3 T TENSOR REMARK 3 T11: 0.5827 T22: 0.4854 REMARK 3 T33: 0.4940 T12: -0.0297 REMARK 3 T13: 0.1448 T23: -0.0759 REMARK 3 L TENSOR REMARK 3 L11: 0.1242 L22: 0.0491 REMARK 3 L33: 0.1103 L12: -0.0451 REMARK 3 L13: 0.1128 L23: -0.0659 REMARK 3 S TENSOR REMARK 3 S11: -0.5613 S12: -0.4434 S13: -0.0204 REMARK 3 S21: 0.4480 S22: 0.1982 S23: 0.1958 REMARK 3 S31: 0.3010 S32: -0.4560 S33: -0.0015 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7639 45.3997 -4.6169 REMARK 3 T TENSOR REMARK 3 T11: 0.3811 T22: 0.3598 REMARK 3 T33: 0.5087 T12: 0.0219 REMARK 3 T13: -0.0492 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 0.6767 L22: 0.9236 REMARK 3 L33: 0.8778 L12: -0.6564 REMARK 3 L13: -0.1536 L23: 0.4543 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: 0.0379 S13: 0.5042 REMARK 3 S21: 0.0504 S22: -0.0258 S23: 0.4476 REMARK 3 S31: -0.3702 S32: -0.5432 S33: -0.0009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ORO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006255. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20799 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 55.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5: 0.5 M NACL: 0.2 M REMARK 280 MGCL2: 32.5 % V/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.68267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 117.36533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.02400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 146.70667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.34133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.68267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 117.36533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 146.70667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 88.02400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.34133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 267 O HOH A 501 1.83 REMARK 500 O HOH A 557 O HOH A 563 1.94 REMARK 500 NH1 ARG A 343 O HOH A 502 1.98 REMARK 500 O ALA A 290 O HOH A 503 1.98 REMARK 500 OD1 ASN A 192 O HOH A 504 2.08 REMARK 500 NZ LYS A 389 O HOH A 505 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 305 CB - CG - SD ANGL. DEV. = -30.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 32.74 -154.66 REMARK 500 ALA A 203 -16.12 80.75 REMARK 500 SER A 226 -58.77 71.47 REMARK 500 ARG A 255 -3.23 74.24 REMARK 500 ASP A 274 77.77 60.46 REMARK 500 ARG A 304 -178.26 -66.28 REMARK 500 LEU A 364 56.47 -93.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 87.1 REMARK 620 3 ADP A 401 O3B 173.6 96.6 REMARK 620 4 ADP A 401 O2A 90.6 93.2 84.0 REMARK 620 5 HOH A 522 O 85.2 171.0 90.7 82.3 REMARK 620 6 HOH A 540 O 93.7 95.4 91.1 170.6 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 401 O1B 74.0 REMARK 620 3 HOH A 508 O 88.9 88.3 REMARK 620 4 HOH A 561 O 150.8 107.6 62.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A5H A 404 DBREF 5ORO A 127 391 UNP O14965 AURKA_HUMAN 127 391 SEQADV 5ORO ALA A 290 UNP O14965 CYS 290 CONFLICT SEQRES 1 A 265 GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY ARG PRO LEU SEQRES 2 A 265 GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU ALA ARG GLU SEQRES 3 A 265 LYS GLN SER LYS PHE ILE LEU ALA LEU LYS VAL LEU PHE SEQRES 4 A 265 LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU HIS GLN LEU SEQRES 5 A 265 ARG ARG GLU VAL GLU ILE GLN SER HIS LEU ARG HIS PRO SEQRES 6 A 265 ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS ASP ALA THR SEQRES 7 A 265 ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO LEU GLY THR SEQRES 8 A 265 VAL TYR ARG GLU LEU GLN LYS LEU SER LYS PHE ASP GLU SEQRES 9 A 265 GLN ARG THR ALA THR TYR ILE THR GLU LEU ALA ASN ALA SEQRES 10 A 265 LEU SER TYR CYS HIS SER LYS ARG VAL ILE HIS ARG ASP SEQRES 11 A 265 ILE LYS PRO GLU ASN LEU LEU LEU GLY SER ALA GLY GLU SEQRES 12 A 265 LEU LYS ILE ALA ASP PHE GLY TRP SER VAL HIS ALA PRO SEQRES 13 A 265 SER SER ARG ARG THR TPO LEU ALA GLY THR LEU ASP TYR SEQRES 14 A 265 LEU PRO PRO GLU MET ILE GLU GLY ARG MET HIS ASP GLU SEQRES 15 A 265 LYS VAL ASP LEU TRP SER LEU GLY VAL LEU CYS TYR GLU SEQRES 16 A 265 PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA ASN THR TYR SEQRES 17 A 265 GLN GLU THR TYR LYS ARG ILE SER ARG VAL GLU PHE THR SEQRES 18 A 265 PHE PRO ASP PHE VAL THR GLU GLY ALA ARG ASP LEU ILE SEQRES 19 A 265 SER ARG LEU LEU LYS HIS ASN PRO SER GLN ARG PRO MET SEQRES 20 A 265 LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE THR ALA ASN SEQRES 21 A 265 SER SER LYS PRO SER MODRES 5ORO TPO A 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET ADP A 401 27 HET MG A 402 1 HET MG A 403 1 HET A5H A 404 15 HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM A5H 3-(4-CHLOROPHENYL)-5,6-DIHYDROIMIDAZO[2,1-B][1, HETNAM 2 A5H 3]THIAZOLE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 A5H C11 H9 CL N2 S FORMUL 6 HOH *63(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 ALA A 172 1 7 HELIX 3 AA3 VAL A 174 LEU A 188 1 15 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 SER A 249 1 21 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 297 GLU A 302 1 6 HELIX 8 AA8 GLU A 308 GLY A 325 1 18 HELIX 9 AA9 THR A 333 VAL A 344 1 12 HELIX 10 AB1 THR A 353 LEU A 364 1 12 HELIX 11 AB2 ASN A 367 ARG A 371 5 5 HELIX 12 AB3 MET A 373 GLU A 379 1 7 HELIX 13 AB4 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O LEU A 161 N TYR A 148 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK OD1 ASN A 261 MG MG A 402 1555 1555 2.31 LINK OD1 ASP A 274 MG MG A 403 1555 1555 2.67 LINK OD2 ASP A 274 MG MG A 402 1555 1555 2.15 LINK C THR A 287 N TPO A 288 1555 1555 1.33 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK O1B ADP A 401 MG MG A 403 1555 1555 2.36 LINK O3B ADP A 401 MG MG A 402 1555 1555 1.99 LINK O2A ADP A 401 MG MG A 402 1555 1555 2.14 LINK MG MG A 402 O HOH A 522 1555 1555 1.91 LINK MG MG A 402 O HOH A 540 1555 1555 2.01 LINK MG MG A 403 O HOH A 508 1555 1555 2.51 LINK MG MG A 403 O HOH A 561 1555 1555 2.10 CISPEP 1 ALA A 281 PRO A 282 0 -0.76 SITE 1 AC1 23 LEU A 139 GLY A 140 GLY A 142 LYS A 143 SITE 2 AC1 23 GLY A 145 VAL A 147 ALA A 160 LYS A 162 SITE 3 AC1 23 LEU A 194 GLU A 211 ALA A 213 THR A 217 SITE 4 AC1 23 GLU A 260 ASN A 261 LEU A 263 ASP A 274 SITE 5 AC1 23 MG A 402 MG A 403 HOH A 522 HOH A 533 SITE 6 AC1 23 HOH A 540 HOH A 552 HOH A 555 SITE 1 AC2 5 ASN A 261 ASP A 274 ADP A 401 HOH A 522 SITE 2 AC2 5 HOH A 540 SITE 1 AC3 4 ASP A 274 ADP A 401 HOH A 508 HOH A 561 SITE 1 AC4 6 TRP A 128 PHE A 133 GLU A 152 PHE A 157 SITE 2 AC4 6 TYR A 197 TYR A 334 CRYST1 82.313 82.313 176.048 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012149 0.007014 0.000000 0.00000 SCALE2 0.000000 0.014028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005680 0.00000