HEADER TRANSFERASE 16-AUG-17 5OS5 TITLE CRYSTAL STRUCTURE OF AURORA-A KINASE IN COMPLEX WITH AN ALLOSTERICALLY TITLE 2 BINDING FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, ALLOSTERIC INHIBITOR, FRAGMENT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.MCINTYRE,P.M.COLLINS,F.VON DELFT,R.BAYLISS REVDAT 2 29-NOV-17 5OS5 1 JRNL REVDAT 1 01-NOV-17 5OS5 0 JRNL AUTH P.J.MCINTYRE,P.M.COLLINS,L.VRZAL,K.BIRCHALL,L.H.ARNOLD, JRNL AUTH 2 C.MPAMHANGA,P.J.COOMBS,S.G.BURGESS,M.W.RICHARDS,A.WINTER, JRNL AUTH 3 V.VEVERKA,F.V.DELFT,A.MERRITT,R.BAYLISS JRNL TITL CHARACTERIZATION OF THREE DRUGGABLE HOT-SPOTS IN THE JRNL TITL 2 AURORA-A/TPX2 INTERACTION USING BIOCHEMICAL, BIOPHYSICAL, JRNL TITL 3 AND FRAGMENT-BASED APPROACHES. JRNL REF ACS CHEM. BIOL. V. 12 2906 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 29045126 JRNL DOI 10.1021/ACSCHEMBIO.7B00537 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2157 23.1043 -12.9537 REMARK 3 T TENSOR REMARK 3 T11: 0.5092 T22: 0.5128 REMARK 3 T33: 0.4411 T12: -0.1181 REMARK 3 T13: 0.0133 T23: -0.1366 REMARK 3 L TENSOR REMARK 3 L11: 3.9483 L22: 2.8826 REMARK 3 L33: 2.4039 L12: 0.0323 REMARK 3 L13: 0.2889 L23: 0.6215 REMARK 3 S TENSOR REMARK 3 S11: -0.1466 S12: 0.5581 S13: -0.4871 REMARK 3 S21: -0.0907 S22: 0.0512 S23: -0.1189 REMARK 3 S31: 0.8338 S32: -0.5885 S33: 0.0488 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1421 22.5676 -12.3154 REMARK 3 T TENSOR REMARK 3 T11: 0.4292 T22: 0.3301 REMARK 3 T33: 0.4580 T12: -0.0362 REMARK 3 T13: 0.0330 T23: -0.1302 REMARK 3 L TENSOR REMARK 3 L11: 6.5642 L22: 3.0958 REMARK 3 L33: 3.0361 L12: 3.6592 REMARK 3 L13: -2.0956 L23: -1.7492 REMARK 3 S TENSOR REMARK 3 S11: -0.2152 S12: 0.1307 S13: -0.5908 REMARK 3 S21: -0.0734 S22: 0.2699 S23: -0.5183 REMARK 3 S31: 0.2899 S32: -0.0696 S33: -0.0351 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0977 20.7859 -16.9881 REMARK 3 T TENSOR REMARK 3 T11: 0.5982 T22: 0.4697 REMARK 3 T33: 0.3366 T12: -0.0461 REMARK 3 T13: -0.0264 T23: -0.0931 REMARK 3 L TENSOR REMARK 3 L11: 3.9703 L22: 5.4307 REMARK 3 L33: 3.4352 L12: -1.0675 REMARK 3 L13: 0.8120 L23: -4.3049 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: 0.2117 S13: -0.3760 REMARK 3 S21: -1.0464 S22: -0.0714 S23: 0.2754 REMARK 3 S31: 0.2866 S32: -0.6549 S33: -0.0443 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7289 35.1926 -10.5209 REMARK 3 T TENSOR REMARK 3 T11: 0.3413 T22: 0.3100 REMARK 3 T33: 0.2650 T12: -0.0711 REMARK 3 T13: -0.0151 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 4.2160 L22: 4.5768 REMARK 3 L33: 1.8926 L12: -1.2730 REMARK 3 L13: -1.1492 L23: 1.6227 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: 0.2287 S13: 0.2383 REMARK 3 S21: -0.2639 S22: 0.1865 S23: -0.2759 REMARK 3 S31: -0.0427 S32: 0.0297 S33: -0.0910 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8157 26.0486 -7.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.4489 T22: 0.3630 REMARK 3 T33: 0.4832 T12: -0.0732 REMARK 3 T13: -0.0531 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 4.5362 L22: 2.2458 REMARK 3 L33: 3.2354 L12: -0.3852 REMARK 3 L13: -1.4201 L23: 1.0054 REMARK 3 S TENSOR REMARK 3 S11: -0.2213 S12: 0.2216 S13: -0.7086 REMARK 3 S21: 0.0629 S22: 0.1218 S23: 0.4164 REMARK 3 S31: 0.7275 S32: -0.2893 S33: 0.1348 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6098 40.8445 -1.5137 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.2846 REMARK 3 T33: 0.4292 T12: 0.0570 REMARK 3 T13: -0.0451 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 3.6731 L22: 4.5183 REMARK 3 L33: 3.5950 L12: 0.2535 REMARK 3 L13: -1.1949 L23: 0.3265 REMARK 3 S TENSOR REMARK 3 S11: -0.0973 S12: 0.1721 S13: 0.4127 REMARK 3 S21: -0.0490 S22: 0.0003 S23: 0.3055 REMARK 3 S31: -0.2009 S32: -0.2279 S33: 0.1090 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.9467 45.4938 -20.2456 REMARK 3 T TENSOR REMARK 3 T11: 1.2813 T22: 1.8526 REMARK 3 T33: 0.7224 T12: -0.3482 REMARK 3 T13: 0.0876 T23: -0.0865 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 2.0000 REMARK 3 L33: 7.8977 L12: 5.4168 REMARK 3 L13: 2.0000 L23: 3.7341 REMARK 3 S TENSOR REMARK 3 S11: 1.1951 S12: 9.2809 S13: 0.8283 REMARK 3 S21: -1.1382 S22: -2.6027 S23: 1.4657 REMARK 3 S31: 1.2413 S32: 3.0455 S33: 1.4089 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OS5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006274. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68326 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 66.074 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.33 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.99 REMARK 200 R MERGE FOR SHELL (I) : 2.23600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5: 0.5 M NACL: 0.2 M REMARK 280 MGCL2: 32.5 % V/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.43667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.87333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.65500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 146.09167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.21833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.43667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.87333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 146.09167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 87.65500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.21833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 GLN A 127 CG CD OE1 NE2 REMARK 470 GLU A 131 CG CD OE1 OE2 REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 GLN A 154 CG CD OE1 NE2 REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CZ NH1 NH2 REMARK 470 ARG A 286 CG CD NE CZ NH1 NH2 REMARK 470 MET A 305 CG SD CE REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 223 O HOH A 501 2.00 REMARK 500 O HOH A 507 O HOH A 604 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 127 29.18 85.62 REMARK 500 ASP A 202 -159.87 -131.89 REMARK 500 SER A 226 -55.56 74.59 REMARK 500 ASP A 256 40.07 -144.11 REMARK 500 ASP A 274 79.63 58.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 90.6 REMARK 620 3 ADP A 401 O3B 176.7 89.9 REMARK 620 4 ADP A 401 O2A 94.5 94.1 88.7 REMARK 620 5 HOH A 562 O 87.0 96.0 89.7 169.8 REMARK 620 6 HOH A 558 O 86.5 177.0 93.0 85.4 84.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 401 O1B 82.2 REMARK 620 3 HOH A 503 O 81.5 95.5 REMARK 620 4 HOH A 569 O 153.3 81.7 121.2 REMARK 620 5 HOH A 572 O 89.7 89.5 169.2 69.0 REMARK 620 6 HOH A 605 O 86.2 162.2 96.1 103.5 76.9 REMARK 620 7 HOH A 611 O 148.8 115.0 71.4 57.9 115.0 81.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A8K A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 406 DBREF 5OS5 A 125 392 UNP O14965 AURKA_HUMAN 125 392 SEQADV 5OS5 ALA A 290 UNP O14965 CYS 290 CONFLICT SEQRES 1 A 268 LYS ARG GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY ARG SEQRES 2 A 268 PRO LEU GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU ALA SEQRES 3 A 268 ARG GLU LYS GLN SER LYS PHE ILE LEU ALA LEU LYS VAL SEQRES 4 A 268 LEU PHE LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU HIS SEQRES 5 A 268 GLN LEU ARG ARG GLU VAL GLU ILE GLN SER HIS LEU ARG SEQRES 6 A 268 HIS PRO ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS ASP SEQRES 7 A 268 ALA THR ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO LEU SEQRES 8 A 268 GLY THR VAL TYR ARG GLU LEU GLN LYS LEU SER LYS PHE SEQRES 9 A 268 ASP GLU GLN ARG THR ALA THR TYR ILE THR GLU LEU ALA SEQRES 10 A 268 ASN ALA LEU SER TYR CYS HIS SER LYS ARG VAL ILE HIS SEQRES 11 A 268 ARG ASP ILE LYS PRO GLU ASN LEU LEU LEU GLY SER ALA SEQRES 12 A 268 GLY GLU LEU LYS ILE ALA ASP PHE GLY TRP SER VAL HIS SEQRES 13 A 268 ALA PRO SER SER ARG ARG THR TPO LEU ALA GLY THR LEU SEQRES 14 A 268 ASP TYR LEU PRO PRO GLU MET ILE GLU GLY ARG MET HIS SEQRES 15 A 268 ASP GLU LYS VAL ASP LEU TRP SER LEU GLY VAL LEU CYS SEQRES 16 A 268 TYR GLU PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA ASN SEQRES 17 A 268 THR TYR GLN GLU THR TYR LYS ARG ILE SER ARG VAL GLU SEQRES 18 A 268 PHE THR PHE PRO ASP PHE VAL THR GLU GLY ALA ARG ASP SEQRES 19 A 268 LEU ILE SER ARG LEU LEU LYS HIS ASN PRO SER GLN ARG SEQRES 20 A 268 PRO MET LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE THR SEQRES 21 A 268 ALA ASN SER SER LYS PRO SER ASN MODRES 5OS5 TPO A 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET ADP A 401 27 HET MG A 402 1 HET MG A 403 1 HET A8K A 404 15 HET CL A 405 1 HET CL A 406 1 HET CL A 407 1 HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM A8K 4-(4-HYDROXYPHENYL)SULFANYLPHENOL HETNAM CL CHLORIDE ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 A8K C12 H10 O2 S FORMUL 6 CL 3(CL 1-) FORMUL 9 HOH *125(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 LEU A 188 1 15 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 LYS A 250 1 22 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 297 GLU A 302 1 6 HELIX 8 AA8 GLU A 308 GLY A 325 1 18 HELIX 9 AA9 THR A 333 ARG A 343 1 11 HELIX 10 AB1 THR A 353 LEU A 364 1 12 HELIX 11 AB2 ASN A 367 ARG A 371 5 5 HELIX 12 AB3 MET A 373 GLU A 379 1 7 HELIX 13 AB4 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O VAL A 147 N LEU A 139 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O VAL A 163 N ASN A 146 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK OD1 ASN A 261 MG MG A 402 1555 1555 2.17 LINK OD1 ASP A 274 MG MG A 403 1555 1555 2.86 LINK OD2 ASP A 274 MG MG A 402 1555 1555 2.03 LINK C THR A 287 N TPO A 288 1555 1555 1.33 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK O1B ADP A 401 MG MG A 403 1555 1555 2.06 LINK O3B ADP A 401 MG MG A 402 1555 1555 2.11 LINK O2A ADP A 401 MG MG A 402 1555 1555 2.00 LINK MG MG A 402 O HOH A 562 1555 1555 2.24 LINK MG MG A 402 O HOH A 558 1555 1555 2.21 LINK MG MG A 403 O HOH A 503 1555 1555 2.01 LINK MG MG A 403 O HOH A 569 1555 1555 2.40 LINK MG MG A 403 O HOH A 572 1555 1555 2.15 LINK MG MG A 403 O HOH A 605 1555 1555 2.08 LINK MG MG A 403 O HOH A 611 1555 1555 2.36 CISPEP 1 ARG A 126 GLN A 127 0 7.20 CISPEP 2 ALA A 281 PRO A 282 0 -1.62 SITE 1 AC1 28 GLY A 140 GLY A 142 LYS A 143 PHE A 144 SITE 2 AC1 28 GLY A 145 VAL A 147 ALA A 160 LYS A 162 SITE 3 AC1 28 LEU A 194 GLU A 211 ALA A 213 THR A 217 SITE 4 AC1 28 GLU A 260 ASN A 261 LEU A 263 ASP A 274 SITE 5 AC1 28 MG A 402 MG A 403 HOH A 503 HOH A 513 SITE 6 AC1 28 HOH A 533 HOH A 558 HOH A 562 HOH A 564 SITE 7 AC1 28 HOH A 569 HOH A 572 HOH A 582 HOH A 592 SITE 1 AC2 5 ASN A 261 ASP A 274 ADP A 401 HOH A 558 SITE 2 AC2 5 HOH A 562 SITE 1 AC3 7 ASP A 274 ADP A 401 HOH A 503 HOH A 569 SITE 2 AC3 7 HOH A 572 HOH A 605 HOH A 611 SITE 1 AC4 6 GLU A 175 LEU A 178 ARG A 179 GLU A 183 SITE 2 AC4 6 TYR A 199 VAL A 206 SITE 1 AC5 2 HIS A 366 HOH A 588 SITE 1 AC6 1 HOH A 608 CRYST1 82.370 82.370 175.310 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012140 0.007009 0.000000 0.00000 SCALE2 0.000000 0.014018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005704 0.00000