HEADER DNA BINDING PROTEIN 17-AUG-17 5OS9 TITLE STRUCTURE OF THE B3 DNA-BINDING DOMAIN OF NGA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA BINDING DOMAIN, UNP RESIDUES 29-143; COMPND 5 SYNONYM: PROTEIN NGATHA 1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: RESIDUE 125 IN EACH CHAIN IS A CYSTEINE - 2- COMPND 8 MERCAPTOETHANOL ADDUCT S,S-(2-HYDROXYETHYL)THIOCYSTEINE (3-LETTER COMPND 9 CODE CME). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: NGA1, AT2G46870, F19D11.25; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ER2566; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PLATE31 KEYWDS TRANSCRIPTION FACTOR B3 DNA BINDING DOMAIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.SASNAUSKAS,E.MANAKOVA REVDAT 3 14-NOV-18 5OS9 1 JRNL REVDAT 2 19-SEP-18 5OS9 1 JRNL REVDAT 1 05-SEP-18 5OS9 0 JRNL AUTH G.SASNAUSKAS,E.MANAKOVA,K.LAPENAS,K.KAUNECKAITE,V.SIKSNYS JRNL TITL DNA RECOGNITION BY ARABIDOPSIS TRANSCRIPTION FACTORS ABI3 JRNL TITL 2 AND NGA1. JRNL REF FEBS J. V. 285 4041 2018 JRNL REFN ISSN 1742-4658 JRNL PMID 30183137 JRNL DOI 10.1111/FEBS.14649 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 39391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 75.6562 - 5.4652 0.99 1263 156 0.1792 0.1979 REMARK 3 2 5.4652 - 4.3380 0.99 1191 183 0.1260 0.1656 REMARK 3 3 4.3380 - 3.7897 0.99 1257 164 0.1184 0.1468 REMARK 3 4 3.7897 - 3.4432 1.00 1289 119 0.1333 0.1542 REMARK 3 5 3.4432 - 3.1964 1.00 1270 166 0.1409 0.1686 REMARK 3 6 3.1964 - 3.0080 1.00 1269 142 0.1611 0.1963 REMARK 3 7 3.0080 - 2.8573 1.00 1286 129 0.1584 0.2093 REMARK 3 8 2.8573 - 2.7329 1.00 1262 159 0.1654 0.2309 REMARK 3 9 2.7329 - 2.6277 1.00 1288 122 0.1581 0.2357 REMARK 3 10 2.6277 - 2.5370 1.00 1265 141 0.1662 0.1934 REMARK 3 11 2.5370 - 2.4577 0.99 1264 147 0.1601 0.2335 REMARK 3 12 2.4577 - 2.3874 0.98 1265 115 0.1523 0.2174 REMARK 3 13 2.3874 - 2.3246 0.98 1284 125 0.1552 0.2109 REMARK 3 14 2.3246 - 2.2679 0.99 1254 123 0.1513 0.2132 REMARK 3 15 2.2679 - 2.2163 0.99 1260 141 0.1383 0.1859 REMARK 3 16 2.2163 - 2.1691 0.99 1282 117 0.1453 0.2135 REMARK 3 17 2.1691 - 2.1257 0.99 1319 128 0.1330 0.2202 REMARK 3 18 2.1257 - 2.0856 0.99 1230 152 0.1326 0.2113 REMARK 3 19 2.0856 - 2.0484 1.00 1239 139 0.1384 0.1876 REMARK 3 20 2.0484 - 2.0137 1.00 1297 158 0.1351 0.1969 REMARK 3 21 2.0137 - 1.9812 0.99 1252 169 0.1410 0.2005 REMARK 3 22 1.9812 - 1.9507 0.99 1224 133 0.1455 0.1975 REMARK 3 23 1.9507 - 1.9220 0.99 1284 121 0.1600 0.2355 REMARK 3 24 1.9220 - 1.8949 0.99 1265 143 0.1552 0.2433 REMARK 3 25 1.8949 - 1.8693 0.99 1300 129 0.1651 0.2497 REMARK 3 26 1.8693 - 1.8450 0.99 1294 107 0.1727 0.2510 REMARK 3 27 1.8450 - 1.8220 0.99 1216 133 0.1644 0.2611 REMARK 3 28 1.8220 - 1.8000 0.99 1311 150 0.1829 0.2467 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 1951 REMARK 3 ANGLE : 1.530 2626 REMARK 3 CHIRALITY : 0.110 264 REMARK 3 PLANARITY : 0.011 338 REMARK 3 DIHEDRAL : 17.599 1168 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OS9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006184. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39391 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 75.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.01860 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.10590 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA 1.3.02 REMARK 200 STARTING MODEL: 4LDUA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION: 0.1 M HEPES-NAOH REMARK 280 PH 7.5, 0.2 M POTASSIUM SODIUM TARTRATE, 1.6 M POTASSIUM-SODIUM REMARK 280 PHOSPHATE, 5% PEG 4000. PROTEIN CONCENTRATION: 7.1 MG/ML. DROP: REMARK 280 0.4 MICROL PROTEIN SOLUTION + 0.2 MICROL RESERVOIR SOLUTION., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.37900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.75650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.58950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 23.75650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.37900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 75.58950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 28 REMARK 465 GLY A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 GLY A 151 REMARK 465 MET B 28 REMARK 465 LYS B 142 REMARK 465 VAL B 143 REMARK 465 GLY B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 GLY B 151 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 46 CD CE NZ REMARK 470 LYS A 70 CD CE NZ REMARK 470 ARG A 85 NE CZ NH1 NH2 REMARK 470 LYS A 108 CD CE NZ REMARK 470 ARG A 129 CD NE CZ NH1 NH2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 ARG B 59 NE CZ NH1 NH2 REMARK 470 ASP B 64 CG OD1 OD2 REMARK 470 LYS B 108 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 113 O HOH A 201 2.12 REMARK 500 OE1 GLU A 69 O HOH A 202 2.15 REMARK 500 O PHE B 61 O HOH B 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 335 O HOH B 294 4455 2.02 REMARK 500 O HOH B 235 O HOH B 245 1655 2.04 REMARK 500 O HOH A 312 O HOH A 329 1455 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 70 CB LYS A 70 CG -0.167 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 139 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 140 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LEU B 72 CB - CG - CD1 ANGL. DEV. = -10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 34 -64.10 -94.30 REMARK 500 LYS A 101 -101.41 73.77 REMARK 500 ASP B 30 56.19 -115.95 REMARK 500 MET B 34 -65.71 -98.95 REMARK 500 LYS B 101 -104.31 64.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 310 DISTANCE = 5.90 ANGSTROMS DBREF 5OS9 A 29 143 UNP O82799 NGA1_ARATH 29 143 DBREF 5OS9 B 29 143 UNP O82799 NGA1_ARATH 29 143 SEQADV 5OS9 MET A 28 UNP O82799 INITIATING METHIONINE SEQADV 5OS9 GLY A 144 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 145 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 146 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 147 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 148 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 149 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS A 150 UNP O82799 EXPRESSION TAG SEQADV 5OS9 GLY A 151 UNP O82799 EXPRESSION TAG SEQADV 5OS9 MET B 28 UNP O82799 INITIATING METHIONINE SEQADV 5OS9 GLY B 144 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 145 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 146 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 147 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 148 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 149 UNP O82799 EXPRESSION TAG SEQADV 5OS9 HIS B 150 UNP O82799 EXPRESSION TAG SEQADV 5OS9 GLY B 151 UNP O82799 EXPRESSION TAG SEQRES 1 A 124 MET ALA ASP ARG GLU HIS MET PHE ASP LYS VAL VAL THR SEQRES 2 A 124 PRO SER ASP VAL GLY LYS LEU ASN ARG LEU VAL ILE PRO SEQRES 3 A 124 LYS GLN HIS ALA GLU ARG PHE PHE PRO LEU ASP SER SER SEQRES 4 A 124 SER ASN GLU LYS GLY LEU LEU LEU ASN PHE GLU ASP LEU SEQRES 5 A 124 THR GLY LYS SER TRP ARG PHE ARG TYR SER TYR TRP ASN SEQRES 6 A 124 SER SER GLN SER TYR VAL MET THR LYS GLY TRP SER ARG SEQRES 7 A 124 PHE VAL LYS ASP LYS LYS LEU ASP ALA GLY ASP ILE VAL SEQRES 8 A 124 SER PHE GLN ARG CME VAL GLY ASP SER GLY ARG ASP SER SEQRES 9 A 124 ARG LEU PHE ILE ASP TRP ARG ARG ARG PRO LYS VAL GLY SEQRES 10 A 124 HIS HIS HIS HIS HIS HIS GLY SEQRES 1 B 124 MET ALA ASP ARG GLU HIS MET PHE ASP LYS VAL VAL THR SEQRES 2 B 124 PRO SER ASP VAL GLY LYS LEU ASN ARG LEU VAL ILE PRO SEQRES 3 B 124 LYS GLN HIS ALA GLU ARG PHE PHE PRO LEU ASP SER SER SEQRES 4 B 124 SER ASN GLU LYS GLY LEU LEU LEU ASN PHE GLU ASP LEU SEQRES 5 B 124 THR GLY LYS SER TRP ARG PHE ARG TYR SER TYR TRP ASN SEQRES 6 B 124 SER SER GLN SER TYR VAL MET THR LYS GLY TRP SER ARG SEQRES 7 B 124 PHE VAL LYS ASP LYS LYS LEU ASP ALA GLY ASP ILE VAL SEQRES 8 B 124 SER PHE GLN ARG CME VAL GLY ASP SER GLY ARG ASP SER SEQRES 9 B 124 ARG LEU PHE ILE ASP TRP ARG ARG ARG PRO LYS VAL GLY SEQRES 10 B 124 HIS HIS HIS HIS HIS HIS GLY MODRES 5OS9 CME A 123 CYS MODIFIED RESIDUE MODRES 5OS9 CME B 123 CYS MODIFIED RESIDUE HET CME A 123 10 HET CME B 123 10 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 HOH *260(H2 O) HELIX 1 AA1 THR A 40 GLY A 45 1 6 HELIX 2 AA2 PRO A 53 PHE A 61 1 9 HELIX 3 AA3 GLY A 102 LYS A 111 1 10 HELIX 4 AA4 THR B 40 GLY B 45 1 6 HELIX 5 AA5 PRO B 53 PHE B 61 1 9 HELIX 6 AA6 ASN B 92 GLN B 95 5 4 HELIX 7 AA7 GLY B 102 LYS B 111 1 10 SHEET 1 AA1 7 ARG A 31 VAL A 38 0 SHEET 2 AA1 7 ILE A 117 CME A 123 -1 O ARG A 122 N GLU A 32 SHEET 3 AA1 7 LEU A 133 ARG A 138 -1 O ASP A 136 N SER A 119 SHEET 4 AA1 7 LEU A 72 GLU A 77 1 N GLU A 77 O LEU A 133 SHEET 5 AA1 7 SER A 83 TRP A 91 -1 O PHE A 86 N LEU A 74 SHEET 6 AA1 7 SER A 96 LYS A 101 -1 O SER A 96 N TRP A 91 SHEET 7 AA1 7 LEU A 50 ILE A 52 -1 N ILE A 52 O TYR A 97 SHEET 1 AA2 7 ARG B 31 VAL B 38 0 SHEET 2 AA2 7 ILE B 117 CME B 123 -1 O ARG B 122 N GLU B 32 SHEET 3 AA2 7 LEU B 133 ARG B 138 -1 O ASP B 136 N SER B 119 SHEET 4 AA2 7 LEU B 72 GLU B 77 1 N GLU B 77 O ILE B 135 SHEET 5 AA2 7 SER B 83 TRP B 91 -1 O PHE B 86 N LEU B 74 SHEET 6 AA2 7 SER B 96 LYS B 101 -1 O SER B 96 N TRP B 91 SHEET 7 AA2 7 LEU B 50 ILE B 52 -1 N ILE B 52 O TYR B 97 LINK C ARG A 122 N CME A 123 1555 1555 1.33 LINK C CME A 123 N VAL A 124 1555 1555 1.35 LINK C ARG B 122 N CME B 123 1555 1555 1.33 LINK C CME B 123 N VAL B 124 1555 1555 1.33 CISPEP 1 ARG A 140 PRO A 141 0 -9.48 CRYST1 30.758 151.179 47.513 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032512 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006615 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021047 0.00000