HEADER OXIDOREDUCTASE 23-AUG-17 5OU0 TITLE CRYSTAL STRUCTURE OF HUMAN AKR1B1 COMPLEXED WITH NADP+ AND COMPOUND 37 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDOSE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AR,ALDEHYDE REDUCTASE,ALDO-KETO REDUCTASE FAMILY 1 MEMBER COMPND 5 B1; COMPND 6 EC: 1.1.1.21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AKR1B1, ALDR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA-BETA TIM BARREL, CYTOSOL, ALDO-KETO REDUCTASE, PYRIMIDO[4, 5- KEYWDS 2 C]QUINOLONE-2-ACETIC ACID SCAFFOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.COUSIDO-SIAH,F.X.RUIZ,A.MITSCHLER,K.METWALLY,A.PODJARNY REVDAT 2 17-JAN-24 5OU0 1 REMARK REVDAT 1 09-MAY-18 5OU0 0 JRNL AUTH I.CRESPO,J.GIMENEZ-DEJOZ,S.PORTE,A.COUSIDO-SIAH,A.MITSCHLER, JRNL AUTH 2 A.PODJARNY,H.PRATSINIS,D.KLETSAS,X.PARES,F.X.RUIZ, JRNL AUTH 3 K.METWALLY,J.FARRES JRNL TITL DESIGN, SYNTHESIS, STRUCTURE-ACTIVITY RELATIONSHIPS AND JRNL TITL 2 X-RAY STRUCTURAL STUDIES OF NOVEL JRNL TITL 3 1-OXOPYRIMIDO[4,5-C]QUINOLINE-2-ACETIC ACID DERIVATIVES AS JRNL TITL 4 SELECTIVE AND POTENT INHIBITORS OF HUMAN ALDOSE REDUCTASE. JRNL REF EUR J MED CHEM V. 152 160 2018 JRNL REFN ISSN 1768-3254 JRNL PMID 29705708 JRNL DOI 10.1016/J.EJMECH.2018.04.015 REMARK 2 REMARK 2 RESOLUTION. 0.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.760 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 181549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.129 REMARK 3 FREE R VALUE : 0.143 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5516 - 2.9162 0.84 10588 500 0.1494 0.1597 REMARK 3 2 2.9162 - 2.3149 0.94 11798 674 0.1570 0.1670 REMARK 3 3 2.3149 - 2.0223 0.97 12174 676 0.1413 0.1482 REMARK 3 4 2.0223 - 1.8374 0.97 12186 686 0.1329 0.1449 REMARK 3 5 1.8374 - 1.7058 0.97 12228 638 0.1311 0.1507 REMARK 3 6 1.7058 - 1.6052 0.97 12132 652 0.1180 0.1407 REMARK 3 7 1.6052 - 1.5248 0.97 12046 644 0.1116 0.1303 REMARK 3 8 1.5248 - 1.4584 0.96 12160 642 0.1073 0.1235 REMARK 3 9 1.4584 - 1.4023 0.96 12114 662 0.1049 0.1208 REMARK 3 10 1.4023 - 1.3539 0.96 11914 696 0.1085 0.1198 REMARK 3 11 1.3539 - 1.3116 0.95 11926 620 0.1042 0.1341 REMARK 3 12 1.3116 - 1.2741 0.95 11926 644 0.1074 0.1203 REMARK 3 13 1.2741 - 1.2405 0.95 11904 576 0.1039 0.1208 REMARK 3 14 1.2405 - 1.2103 0.95 11876 638 0.1014 0.1156 REMARK 3 15 1.2103 - 1.1827 0.94 11968 576 0.1014 0.1239 REMARK 3 16 1.1827 - 1.1576 0.94 11790 614 0.1023 0.1095 REMARK 3 17 1.1576 - 1.1344 0.94 11702 602 0.1019 0.1121 REMARK 3 18 1.1344 - 1.1130 0.93 11742 610 0.1059 0.1165 REMARK 3 19 1.1130 - 1.0931 0.93 11722 584 0.1038 0.1257 REMARK 3 20 1.0931 - 1.0746 0.93 11598 626 0.1125 0.1361 REMARK 3 21 1.0746 - 1.0573 0.93 11562 670 0.1148 0.1212 REMARK 3 22 1.0573 - 1.0410 0.92 11486 678 0.1160 0.1311 REMARK 3 23 1.0410 - 1.0257 0.92 11604 604 0.1212 0.1453 REMARK 3 24 1.0257 - 1.0112 0.91 11570 580 0.1339 0.1506 REMARK 3 25 1.0112 - 0.9976 0.91 11340 522 0.1408 0.1591 REMARK 3 26 0.9976 - 0.9846 0.90 11438 522 0.1488 0.1528 REMARK 3 27 0.9846 - 0.9723 0.87 10874 594 0.1634 0.1789 REMARK 3 28 0.9723 - 0.9606 0.82 10352 544 0.1763 0.1934 REMARK 3 29 0.9606 - 0.9494 0.75 9462 468 0.1943 0.2118 REMARK 3 30 0.9494 - 0.9388 0.62 7740 404 0.2064 0.2329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.026 2876 REMARK 3 ANGLE : 1.972 3961 REMARK 3 CHIRALITY : 0.118 430 REMARK 3 PLANARITY : 0.014 502 REMARK 3 DIHEDRAL : 16.619 1099 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 181549 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.940 REMARK 200 RESOLUTION RANGE LOW (A) : 31.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IGS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 50 MM MES, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C15 AV5 A 402 O HOH A 620 1.47 REMARK 500 O PRO A 218 N TRP A 219 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 60 CG GLU A 60 CD -0.155 REMARK 500 GLU A 70 CB GLU A 70 CG -0.122 REMARK 500 CYS A 298 CB CYS A 298 SG -0.130 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 36 O - C - N ANGL. DEV. = 10.4 DEGREES REMARK 500 GLU A 60 CA - CB - CG ANGL. DEV. = -17.8 DEGREES REMARK 500 GLU A 60 OE1 - CD - OE2 ANGL. DEV. = 11.5 DEGREES REMARK 500 PRO A 218 CA - C - N ANGL. DEV. = 34.6 DEGREES REMARK 500 PRO A 218 O - C - N ANGL. DEV. = -39.6 DEGREES REMARK 500 PRO A 218 O - C - N ANGL. DEV. = -14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 50 15.87 -144.60 REMARK 500 TRP A 219 52.74 -116.24 REMARK 500 ALA A 220 128.67 -35.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 209 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MET A 168 12.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 915 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 916 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 917 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 918 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A 919 DISTANCE = 7.55 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AV5 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IGS RELATED DB: PDB REMARK 900 RELATED ID: 5OUJ RELATED DB: PDB REMARK 900 RELATED ID: 5OUK RELATED DB: PDB DBREF 5OU0 A 0 315 UNP P15121 ALDR_HUMAN 1 316 SEQADV 5OU0 ILE A 4 UNP P15121 LEU 5 CONFLICT SEQRES 1 A 316 MET ALA SER ARG ILE LEU LEU ASN ASN GLY ALA LYS MET SEQRES 2 A 316 PRO ILE LEU GLY LEU GLY THR TRP LYS SER PRO PRO GLY SEQRES 3 A 316 GLN VAL THR GLU ALA VAL LYS VAL ALA ILE ASP VAL GLY SEQRES 4 A 316 TYR ARG HIS ILE ASP CYS ALA HIS VAL TYR GLN ASN GLU SEQRES 5 A 316 ASN GLU VAL GLY VAL ALA ILE GLN GLU LYS LEU ARG GLU SEQRES 6 A 316 GLN VAL VAL LYS ARG GLU GLU LEU PHE ILE VAL SER LYS SEQRES 7 A 316 LEU TRP CYS THR TYR HIS GLU LYS GLY LEU VAL LYS GLY SEQRES 8 A 316 ALA CYS GLN LYS THR LEU SER ASP LEU LYS LEU ASP TYR SEQRES 9 A 316 LEU ASP LEU TYR LEU ILE HIS TRP PRO THR GLY PHE LYS SEQRES 10 A 316 PRO GLY LYS GLU PHE PHE PRO LEU ASP GLU SER GLY ASN SEQRES 11 A 316 VAL VAL PRO SER ASP THR ASN ILE LEU ASP THR TRP ALA SEQRES 12 A 316 ALA MET GLU GLU LEU VAL ASP GLU GLY LEU VAL LYS ALA SEQRES 13 A 316 ILE GLY ILE SER ASN PHE ASN HIS LEU GLN VAL GLU MET SEQRES 14 A 316 ILE LEU ASN LYS PRO GLY LEU LYS TYR LYS PRO ALA VAL SEQRES 15 A 316 ASN GLN ILE GLU CYS HIS PRO TYR LEU THR GLN GLU LYS SEQRES 16 A 316 LEU ILE GLN TYR CYS GLN SER LYS GLY ILE VAL VAL THR SEQRES 17 A 316 ALA TYR SER PRO LEU GLY SER PRO ASP ARG PRO TRP ALA SEQRES 18 A 316 LYS PRO GLU ASP PRO SER LEU LEU GLU ASP PRO ARG ILE SEQRES 19 A 316 LYS ALA ILE ALA ALA LYS HIS ASN LYS THR THR ALA GLN SEQRES 20 A 316 VAL LEU ILE ARG PHE PRO MET GLN ARG ASN LEU VAL VAL SEQRES 21 A 316 ILE PRO LYS SER VAL THR PRO GLU ARG ILE ALA GLU ASN SEQRES 22 A 316 PHE LYS VAL PHE ASP PHE GLU LEU SER SER GLN ASP MET SEQRES 23 A 316 THR THR LEU LEU SER TYR ASN ARG ASN TRP ARG VAL CYS SEQRES 24 A 316 ALA LEU LEU SER CYS THR SER HIS LYS ASP TYR PRO PHE SEQRES 25 A 316 HIS GLU GLU PHE HET NAP A 401 48 HET AV5 A 402 54 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM AV5 2-[5-(4-CHLOROPHENYL)-3-METHYL-1-OXIDANYLIDENE- HETNAM 2 AV5 PYRIMIDO[4,5-C]QUINOLIN-2-YL]ETHANOIC ACID HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 AV5 C20 H14 CL N3 O3 FORMUL 4 HOH *419(H2 O) HELIX 1 AA1 PRO A 23 GLY A 38 1 16 HELIX 2 AA2 ALA A 45 GLN A 49 5 5 HELIX 3 AA3 ASN A 50 GLU A 64 1 15 HELIX 4 AA4 LYS A 68 LEU A 72 5 5 HELIX 5 AA5 TRP A 79 HIS A 83 5 5 HELIX 6 AA6 GLU A 84 GLY A 86 5 3 HELIX 7 AA7 LEU A 87 LYS A 100 1 14 HELIX 8 AA8 ASN A 136 GLU A 150 1 15 HELIX 9 AA9 ASN A 162 ASN A 171 1 10 HELIX 10 AB1 GLN A 192 LYS A 202 1 11 HELIX 11 AB2 SER A 226 GLU A 229 5 4 HELIX 12 AB3 ASP A 230 HIS A 240 1 11 HELIX 13 AB4 THR A 243 GLN A 254 1 12 HELIX 14 AB5 THR A 265 LYS A 274 1 10 HELIX 15 AB6 SER A 281 TYR A 291 1 11 HELIX 16 AB7 LEU A 300 THR A 304 5 5 SHEET 1 AA1 2 ARG A 3 LEU A 5 0 SHEET 2 AA1 2 LYS A 11 PRO A 13 -1 O MET A 12 N ILE A 4 SHEET 1 AA2 8 LEU A 17 GLY A 18 0 SHEET 2 AA2 8 HIS A 41 ASP A 43 1 O ASP A 43 N LEU A 17 SHEET 3 AA2 8 PHE A 73 LEU A 78 1 O VAL A 75 N ILE A 42 SHEET 4 AA2 8 LEU A 106 ILE A 109 1 O LEU A 108 N LEU A 78 SHEET 5 AA2 8 ILE A 156 SER A 159 1 O GLY A 157 N ILE A 109 SHEET 6 AA2 8 VAL A 181 GLU A 185 1 O VAL A 181 N ILE A 158 SHEET 7 AA2 8 VAL A 205 TYR A 209 1 O THR A 207 N ILE A 184 SHEET 8 AA2 8 VAL A 258 VAL A 259 1 O VAL A 258 N ALA A 208 SITE 1 AC1 36 GLY A 18 THR A 19 TRP A 20 LYS A 21 SITE 2 AC1 36 ASP A 43 TYR A 48 HIS A 110 TRP A 111 SITE 3 AC1 36 SER A 159 ASN A 160 GLN A 183 TYR A 209 SITE 4 AC1 36 SER A 210 PRO A 211 LEU A 212 GLY A 213 SITE 5 AC1 36 SER A 214 PRO A 215 ASP A 216 ALA A 245 SITE 6 AC1 36 ILE A 260 PRO A 261 LYS A 262 SER A 263 SITE 7 AC1 36 VAL A 264 THR A 265 ARG A 268 GLU A 271 SITE 8 AC1 36 ASN A 272 AV5 A 402 HOH A 515 HOH A 544 SITE 9 AC1 36 HOH A 560 HOH A 573 HOH A 606 HOH A 718 SITE 1 AC2 17 TRP A 20 VAL A 47 TYR A 48 GLN A 49 SITE 2 AC2 17 HIS A 110 TRP A 111 PHE A 122 TRP A 219 SITE 3 AC2 17 CYS A 298 NAP A 401 HOH A 620 HOH A 635 SITE 4 AC2 17 HOH A 709 HOH A 721 HOH A 745 HOH A 806 SITE 5 AC2 17 HOH A 841 CRYST1 39.758 46.771 47.157 76.45 67.76 78.18 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025152 -0.005264 -0.009518 0.00000 SCALE2 0.000000 0.021844 -0.003838 0.00000 SCALE3 0.000000 0.000000 0.023261 0.00000