HEADER SIGNALING PROTEIN 28-AUG-17 5OVD TITLE RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR SOS1 (REM-CDC25) IN NEW CRYSTAL TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SOS-1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GUANINE EXCHANGE FACTOR, GEF, INHIBITOR, SOS1, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.C.HILLIG,D.MOOSMAYER,A.HILPMANN,B.BADER,J.SCHROEDER,L.WORTMANN, AUTHOR 2 B.SAUTIER,J.KAHMANN,D.WEGENER,H.BRIEM,K.PETERSEN,V.BADOCK REVDAT 4 17-JAN-24 5OVD 1 REMARK REVDAT 3 06-MAR-19 5OVD 1 REMARK REVDAT 2 20-FEB-19 5OVD 1 JRNL REVDAT 1 06-FEB-19 5OVD 0 JRNL AUTH R.C.HILLIG,B.SAUTIER,J.SCHROEDER,D.MOOSMAYER,A.HILPMANN, JRNL AUTH 2 C.M.STEGMANN,N.D.WERBECK,H.BRIEM,U.BOEMER,J.WEISKE,V.BADOCK, JRNL AUTH 3 J.MASTOURI,K.PETERSEN,G.SIEMEISTER,J.D.KAHMANN,D.WEGENER, JRNL AUTH 4 N.BOHNKE,K.EIS,K.GRAHAM,L.WORTMANN,F.VON NUSSBAUM,B.BADER JRNL TITL DISCOVERY OF POTENT SOS1 INHIBITORS THAT BLOCK RAS JRNL TITL 2 ACTIVATION VIA DISRUPTION OF THE RAS-SOS1 INTERACTION. JRNL REF PROC. NATL. ACAD. SCI. V. 116 2551 2019 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30683722 JRNL DOI 10.1073/PNAS.1812963116 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 47196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3356 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3856 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 344 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.98000 REMARK 3 B22 (A**2) : -2.37000 REMARK 3 B33 (A**2) : 0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.237 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4014 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3791 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5425 ; 1.295 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8831 ; 0.933 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 477 ; 5.044 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;33.024 ;23.762 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 746 ;14.565 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;15.951 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 590 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4342 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 816 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1872 ; 1.533 ; 1.889 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1871 ; 1.517 ; 1.887 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2337 ; 2.254 ; 4.231 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2338 ; 2.257 ; 4.233 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2142 ; 2.455 ; 2.210 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2142 ; 2.448 ; 2.210 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3081 ; 3.694 ; 4.770 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4670 ; 7.257 ;25.146 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4671 ; 7.256 ;25.156 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 560 A 744 REMARK 3 ORIGIN FOR THE GROUP (A): 44.1547 -9.4309 10.5509 REMARK 3 T TENSOR REMARK 3 T11: 0.4941 T22: 0.5011 REMARK 3 T33: 0.3523 T12: 0.0036 REMARK 3 T13: -0.0202 T23: -0.2030 REMARK 3 L TENSOR REMARK 3 L11: 3.7919 L22: 6.0225 REMARK 3 L33: 4.4277 L12: -0.0201 REMARK 3 L13: 0.6707 L23: 1.8906 REMARK 3 S TENSOR REMARK 3 S11: 0.0924 S12: 0.7387 S13: -0.9484 REMARK 3 S21: -0.6512 S22: 0.1868 S23: 0.1692 REMARK 3 S31: 0.4115 S32: -0.1154 S33: -0.2792 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 753 A 1044 REMARK 3 ORIGIN FOR THE GROUP (A): 44.3452 30.7467 30.0576 REMARK 3 T TENSOR REMARK 3 T11: 0.0988 T22: 0.2776 REMARK 3 T33: 0.0093 T12: 0.0240 REMARK 3 T13: 0.0259 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.1408 L22: 3.2937 REMARK 3 L33: 1.2511 L12: 0.1853 REMARK 3 L13: 0.0574 L23: 0.6570 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: 0.0050 S13: 0.0088 REMARK 3 S21: -0.0287 S22: 0.0862 S23: -0.0369 REMARK 3 S31: 0.0510 S32: 0.0613 S33: -0.0296 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5OVD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JUN 1, 2017 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION JUN 1, 2017 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49297 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.790 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 13.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.87 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.05200 REMARK 200 FOR SHELL : 1.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 2II0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CONCENTRATION 30.7 MG/ML. REMARK 280 PROTEIN BUFFER 25 MILLIMOLAR TRIS-HCL PH 7.5, 50 MILLIMOLAR NACL, REMARK 280 1 MILLIMOLAR DTT. RESERVOIR 23% (V/V) ETHYLENGLYCOL. NO CRYO REMARK 280 REQUIRED AS GROWN FROM ETHYLENGLYCOL AS PRECIPITANT, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.47050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.68600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.47050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.68600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 591 REMARK 465 MET A 592 REMARK 465 GLN A 593 REMARK 465 PRO A 594 REMARK 465 LYS A 595 REMARK 465 ALA A 596 REMARK 465 ILE A 663 REMARK 465 GLU A 664 REMARK 465 ASN A 665 REMARK 465 GLY A 666 REMARK 465 ASP A 667 REMARK 465 GLN A 668 REMARK 465 ASP A 745 REMARK 465 ASN A 746 REMARK 465 GLY A 747 REMARK 465 PRO A 748 REMARK 465 GLY A 749 REMARK 465 HIS A 750 REMARK 465 ASN A 751 REMARK 465 ILE A 752 REMARK 465 PRO A 1045 REMARK 465 ARG A 1046 REMARK 465 PRO A 1047 REMARK 465 GLY A 1048 REMARK 465 THR A 1049 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 681 -63.49 -149.41 REMARK 500 HIS A 764 -89.38 -128.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1105 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2II0 RELATED DB: PDB REMARK 900 RELATED ID: 5OVE RELATED DB: PDB REMARK 900 RELATED ID: 5OVF RELATED DB: PDB REMARK 900 RELATED ID: 5OVG RELATED DB: PDB REMARK 900 RELATED ID: 5OVH RELATED DB: PDB REMARK 900 RELATED ID: 5OVI RELATED DB: PDB DBREF 5OVD A 560 1049 UNP Q07889 SOS1_HUMAN 560 1049 SEQADV 5OVD GLY A 560 UNP Q07889 GLN 560 ENGINEERED MUTATION SEQADV 5OVD ALA A 561 UNP Q07889 GLU 561 ENGINEERED MUTATION SEQADV 5OVD MET A 562 UNP Q07889 GLU 562 ENGINEERED MUTATION SEQADV 5OVD ALA A 563 UNP Q07889 LYS 563 ENGINEERED MUTATION SEQRES 1 A 490 GLY ALA MET ALA GLU GLU GLN MET ARG LEU PRO SER ALA SEQRES 2 A 490 ASP VAL TYR ARG PHE ALA GLU PRO ASP SER GLU GLU ASN SEQRES 3 A 490 ILE ILE PHE GLU GLU ASN MET GLN PRO LYS ALA GLY ILE SEQRES 4 A 490 PRO ILE ILE LYS ALA GLY THR VAL ILE LYS LEU ILE GLU SEQRES 5 A 490 ARG LEU THR TYR HIS MET TYR ALA ASP PRO ASN PHE VAL SEQRES 6 A 490 ARG THR PHE LEU THR THR TYR ARG SER PHE CYS LYS PRO SEQRES 7 A 490 GLN GLU LEU LEU SER LEU ILE ILE GLU ARG PHE GLU ILE SEQRES 8 A 490 PRO GLU PRO GLU PRO THR GLU ALA ASP ARG ILE ALA ILE SEQRES 9 A 490 GLU ASN GLY ASP GLN PRO LEU SER ALA GLU LEU LYS ARG SEQRES 10 A 490 PHE ARG LYS GLU TYR ILE GLN PRO VAL GLN LEU ARG VAL SEQRES 11 A 490 LEU ASN VAL CYS ARG HIS TRP VAL GLU HIS HIS PHE TYR SEQRES 12 A 490 ASP PHE GLU ARG ASP ALA TYR LEU LEU GLN ARG MET GLU SEQRES 13 A 490 GLU PHE ILE GLY THR VAL ARG GLY LYS ALA MET LYS LYS SEQRES 14 A 490 TRP VAL GLU SER ILE THR LYS ILE ILE GLN ARG LYS LYS SEQRES 15 A 490 ILE ALA ARG ASP ASN GLY PRO GLY HIS ASN ILE THR PHE SEQRES 16 A 490 GLN SER SER PRO PRO THR VAL GLU TRP HIS ILE SER ARG SEQRES 17 A 490 PRO GLY HIS ILE GLU THR PHE ASP LEU LEU THR LEU HIS SEQRES 18 A 490 PRO ILE GLU ILE ALA ARG GLN LEU THR LEU LEU GLU SER SEQRES 19 A 490 ASP LEU TYR ARG ALA VAL GLN PRO SER GLU LEU VAL GLY SEQRES 20 A 490 SER VAL TRP THR LYS GLU ASP LYS GLU ILE ASN SER PRO SEQRES 21 A 490 ASN LEU LEU LYS MET ILE ARG HIS THR THR ASN LEU THR SEQRES 22 A 490 LEU TRP PHE GLU LYS CYS ILE VAL GLU THR GLU ASN LEU SEQRES 23 A 490 GLU GLU ARG VAL ALA VAL VAL SER ARG ILE ILE GLU ILE SEQRES 24 A 490 LEU GLN VAL PHE GLN GLU LEU ASN ASN PHE ASN GLY VAL SEQRES 25 A 490 LEU GLU VAL VAL SER ALA MET ASN SER SER PRO VAL TYR SEQRES 26 A 490 ARG LEU ASP HIS THR PHE GLU GLN ILE PRO SER ARG GLN SEQRES 27 A 490 LYS LYS ILE LEU GLU GLU ALA HIS GLU LEU SER GLU ASP SEQRES 28 A 490 HIS TYR LYS LYS TYR LEU ALA LYS LEU ARG SER ILE ASN SEQRES 29 A 490 PRO PRO CYS VAL PRO PHE PHE GLY ILE TYR LEU THR ASN SEQRES 30 A 490 ILE LEU LYS THR GLU GLU GLY ASN PRO GLU VAL LEU LYS SEQRES 31 A 490 ARG HIS GLY LYS GLU LEU ILE ASN PHE SER LYS ARG ARG SEQRES 32 A 490 LYS VAL ALA GLU ILE THR GLY GLU ILE GLN GLN TYR GLN SEQRES 33 A 490 ASN GLN PRO TYR CYS LEU ARG VAL GLU SER ASP ILE LYS SEQRES 34 A 490 ARG PHE PHE GLU ASN LEU ASN PRO MET GLY ASN SER MET SEQRES 35 A 490 GLU LYS GLU PHE THR ASP TYR LEU PHE ASN LYS SER LEU SEQRES 36 A 490 GLU ILE GLU PRO ARG ASN PRO LYS PRO LEU PRO ARG PHE SEQRES 37 A 490 PRO LYS LYS TYR SER TYR PRO LEU LYS SER PRO GLY VAL SEQRES 38 A 490 ARG PRO SER ASN PRO ARG PRO GLY THR HET EDO A1101 4 HET EDO A1102 4 HET EDO A1103 4 HET EDO A1104 4 HET EDO A1105 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 HOH *344(H2 O) HELIX 1 AA1 GLY A 560 LEU A 569 1 10 HELIX 2 AA2 THR A 605 THR A 614 1 10 HELIX 3 AA3 ASP A 620 TYR A 631 1 12 HELIX 4 AA4 ARG A 632 PHE A 634 5 3 HELIX 5 AA5 LYS A 636 GLU A 649 1 14 HELIX 6 AA6 THR A 656 ALA A 662 1 7 HELIX 7 AA7 SER A 671 TYR A 681 1 11 HELIX 8 AA8 TYR A 681 HIS A 700 1 20 HELIX 9 AA9 PHE A 701 ASP A 707 1 7 HELIX 10 AB1 ASP A 707 VAL A 721 1 15 HELIX 11 AB2 MET A 726 ARG A 744 1 19 HELIX 12 AB3 HIS A 770 PHE A 774 5 5 HELIX 13 AB4 HIS A 780 VAL A 799 1 20 HELIX 14 AB5 GLN A 800 LYS A 811 5 12 HELIX 15 AB6 ASP A 813 SER A 818 1 6 HELIX 16 AB7 SER A 818 GLU A 841 1 24 HELIX 17 AB8 ASN A 844 LEU A 865 1 22 HELIX 18 AB9 ASN A 867 SER A 880 1 14 HELIX 19 AC1 SER A 880 ARG A 885 1 6 HELIX 20 AC2 LEU A 886 ILE A 893 1 8 HELIX 21 AC3 PRO A 894 LEU A 907 1 14 HELIX 22 AC4 SER A 908 ILE A 922 1 15 HELIX 23 AC5 PHE A 930 ASN A 944 1 15 HELIX 24 AC6 PHE A 958 TYR A 974 1 17 HELIX 25 AC7 GLU A 984 ASN A 993 1 10 HELIX 26 AC8 MET A 1001 GLU A 1017 1 17 SHEET 1 AA1 4 ILE A 586 GLU A 589 0 SHEET 2 AA1 4 ILE A 600 GLY A 604 -1 O ILE A 600 N GLU A 589 SHEET 3 AA1 4 LYS A 953 ASN A 957 -1 O ILE A 956 N GLY A 604 SHEET 4 AA1 4 VAL A 947 ARG A 950 -1 N LEU A 948 O LEU A 955 CISPEP 1 PRO A 924 PRO A 925 0 1.60 CISPEP 2 ASN A 1020 PRO A 1021 0 7.53 SITE 1 AC1 6 ILE A 782 ARG A 786 GLU A 864 HOH A1217 SITE 2 AC1 6 HOH A1230 HOH A1335 SITE 1 AC2 4 ASP A 775 CYS A 838 TYR A1031 HOH A1364 SITE 1 AC3 5 LEU A 872 SER A 876 HOH A1327 HOH A1430 SITE 2 AC3 5 HOH A1440 SITE 1 AC4 6 PHE A 890 LYS A 898 GLU A 902 HOH A1213 SITE 2 AC4 6 HOH A1387 HOH A1467 SITE 1 AC5 4 TYR A 933 ASN A 936 GLU A 970 HOH A1228 CRYST1 40.941 85.372 176.100 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024425 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011713 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005679 0.00000