HEADER ELECTRON TRANSPORT 30-AUG-17 5OW0 TITLE CRYSTAL STRUCTURE OF AN ELECTRON TRANSFER FLAVOPROTEIN FROM GEOBACTER TITLE 2 METALLIREDUCENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELECTRON TRANSFER FLAVOPROTEIN, BETA SUBUNIT; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ELECTRON TRANSFER FLAVOPROTEIN, ALPHA SUBUNIT; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER METALLIREDUCENS (STRAIN GS-15 / ATCC SOURCE 3 53774 / DSM 7210); SOURCE 4 ORGANISM_TAXID: 269799; SOURCE 5 STRAIN: GS-15 / ATCC 53774 / DSM 7210; SOURCE 6 GENE: ETFB-5, GMET_1525; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: GEOBACTER METALLIREDUCENS (STRAIN GS-15 / ATCC SOURCE 11 53774 / DSM 7210); SOURCE 12 ORGANISM_TAXID: 269799; SOURCE 13 STRAIN: GS-15 / ATCC 53774 / DSM 7210; SOURCE 14 GENE: ETFA-5, GMET_1526; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ELECTRON TRANSPORT, ANAEROBIC, TOLUENE METABOLISM, FAD, AMP, KEYWDS 2 FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.-O.ESSEN,M.S.VOGT,J.HEIDER,S.KOELZER,P.PESCHKE,N.P.CHOWDHURY, AUTHOR 2 K.SCHUEHLE,D.KLEINSORGE REVDAT 2 11-SEP-19 5OW0 1 TITLE COMPND JRNL REVDAT 1 10-OCT-18 5OW0 0 JRNL AUTH M.S.VOGT,K.SCHUHLE,S.KOLZER,P.PESCHKE,N.P.CHOWDHURY, JRNL AUTH 2 D.KLEINSORGE,W.BUCKEL,L.O.ESSEN,J.HEIDER JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF AN ELECTRON JRNL TITL 2 TRANSFER FLAVOPROTEIN INVOLVED IN TOLUENE DEGRADATION IN JRNL TITL 3 STRICTLY ANAEROBIC BACTERIA. JRNL REF J.BACTERIOL. 2019 JRNL REFN ESSN 1098-5530 JRNL PMID 31405915 JRNL DOI 10.1128/JB.00326-19 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 59434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.7501 - 4.6884 1.00 2883 182 0.1367 0.1545 REMARK 3 2 4.6884 - 3.7219 1.00 2784 133 0.1108 0.1288 REMARK 3 3 3.7219 - 3.2516 1.00 2718 153 0.1247 0.1572 REMARK 3 4 3.2516 - 2.9544 1.00 2735 139 0.1385 0.1622 REMARK 3 5 2.9544 - 2.7427 1.00 2712 125 0.1440 0.1921 REMARK 3 6 2.7427 - 2.5810 1.00 2689 164 0.1393 0.1949 REMARK 3 7 2.5810 - 2.4517 1.00 2702 143 0.1405 0.1858 REMARK 3 8 2.4517 - 2.3450 1.00 2683 127 0.1323 0.1531 REMARK 3 9 2.3450 - 2.2548 1.00 2668 157 0.1294 0.1799 REMARK 3 10 2.2548 - 2.1770 1.00 2682 127 0.1308 0.1632 REMARK 3 11 2.1770 - 2.1089 1.00 2676 137 0.1354 0.1535 REMARK 3 12 2.1089 - 2.0486 1.00 2692 134 0.1347 0.1656 REMARK 3 13 2.0486 - 1.9947 1.00 2641 155 0.1400 0.1857 REMARK 3 14 1.9947 - 1.9460 0.99 2645 128 0.1428 0.1892 REMARK 3 15 1.9460 - 1.9018 1.00 2655 134 0.1449 0.1528 REMARK 3 16 1.9018 - 1.8613 0.99 2627 161 0.1551 0.1941 REMARK 3 17 1.8613 - 1.8241 1.00 2645 141 0.1569 0.1897 REMARK 3 18 1.8241 - 1.7896 0.99 2684 122 0.1666 0.1912 REMARK 3 19 1.7896 - 1.7577 0.99 2636 139 0.1708 0.1989 REMARK 3 20 1.7577 - 1.7279 0.99 2676 107 0.1763 0.2483 REMARK 3 21 1.7279 - 1.7000 0.99 2624 162 0.1960 0.2134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 4252 REMARK 3 ANGLE : 1.539 5790 REMARK 3 CHIRALITY : 0.066 690 REMARK 3 PLANARITY : 0.008 736 REMARK 3 DIHEDRAL : 14.524 1606 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8199 30.9963 74.5179 REMARK 3 T TENSOR REMARK 3 T11: 0.1250 T22: 0.1289 REMARK 3 T33: 0.0849 T12: -0.0187 REMARK 3 T13: -0.0305 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 1.3551 L22: 4.6060 REMARK 3 L33: 1.1213 L12: -1.9859 REMARK 3 L13: 0.0455 L23: -0.2842 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: 0.1048 S13: 0.0206 REMARK 3 S21: -0.3331 S22: -0.0513 S23: 0.0623 REMARK 3 S31: -0.0414 S32: -0.1116 S33: 0.0016 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.0584 24.6161 76.2034 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1599 REMARK 3 T33: 0.1758 T12: -0.0166 REMARK 3 T13: 0.0310 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 4.6039 L22: 8.2894 REMARK 3 L33: 3.3563 L12: -6.0522 REMARK 3 L13: -3.1204 L23: 3.6166 REMARK 3 S TENSOR REMARK 3 S11: 0.1221 S12: -0.1540 S13: 0.2708 REMARK 3 S21: -0.3536 S22: 0.0743 S23: -0.4339 REMARK 3 S31: -0.0914 S32: 0.2333 S33: -0.1703 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4602 19.8182 81.4183 REMARK 3 T TENSOR REMARK 3 T11: 0.1273 T22: 0.1089 REMARK 3 T33: 0.1326 T12: 0.0034 REMARK 3 T13: 0.0135 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.0447 L22: 1.3964 REMARK 3 L33: 1.2547 L12: 0.1288 REMARK 3 L13: 0.0236 L23: 0.1509 REMARK 3 S TENSOR REMARK 3 S11: -0.0254 S12: 0.0224 S13: -0.0983 REMARK 3 S21: -0.0474 S22: 0.0160 S23: -0.0273 REMARK 3 S31: 0.1102 S32: 0.0552 S33: 0.0065 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 158 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.4879 26.0950 91.7234 REMARK 3 T TENSOR REMARK 3 T11: 0.0966 T22: 0.1829 REMARK 3 T33: 0.0980 T12: -0.0031 REMARK 3 T13: 0.0206 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.6094 L22: 8.4613 REMARK 3 L33: 4.1467 L12: -0.4656 REMARK 3 L13: 1.4468 L23: 2.4240 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: -0.1116 S13: 0.0155 REMARK 3 S21: 0.2662 S22: 0.1435 S23: -0.3250 REMARK 3 S31: -0.0028 S32: 0.2134 S33: -0.0274 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 176 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5790 22.9609 67.9239 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1657 REMARK 3 T33: 0.1955 T12: 0.0571 REMARK 3 T13: 0.0019 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.4887 L22: 0.5397 REMARK 3 L33: 2.3870 L12: 0.3046 REMARK 3 L13: -1.6250 L23: -0.7629 REMARK 3 S TENSOR REMARK 3 S11: -0.0898 S12: 0.3419 S13: -0.0361 REMARK 3 S21: -0.3086 S22: 0.1232 S23: -0.0954 REMARK 3 S31: 0.1228 S32: -0.0823 S33: -0.0508 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 204 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2061 53.3631 81.9087 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.1524 REMARK 3 T33: 0.1142 T12: 0.0081 REMARK 3 T13: 0.0079 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.0298 L22: 4.6344 REMARK 3 L33: 0.4239 L12: 1.4205 REMARK 3 L13: -0.2019 L23: -0.6226 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: 0.0389 S13: 0.1265 REMARK 3 S21: -0.1590 S22: 0.0607 S23: 0.1394 REMARK 3 S31: -0.0244 S32: -0.0610 S33: -0.0369 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0405 30.5555 103.8824 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.1434 REMARK 3 T33: 0.1239 T12: 0.0085 REMARK 3 T13: 0.0076 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.2548 L22: 0.9782 REMARK 3 L33: 1.9217 L12: -0.5661 REMARK 3 L13: 0.4352 L23: -0.5325 REMARK 3 S TENSOR REMARK 3 S11: -0.1387 S12: -0.1842 S13: -0.0296 REMARK 3 S21: 0.1825 S22: 0.1180 S23: -0.0005 REMARK 3 S31: -0.0382 S32: -0.0035 S33: 0.0209 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.4555 41.7870 95.4413 REMARK 3 T TENSOR REMARK 3 T11: 0.2956 T22: 0.2627 REMARK 3 T33: 0.2833 T12: -0.0206 REMARK 3 T13: -0.0778 T23: -0.0504 REMARK 3 L TENSOR REMARK 3 L11: 1.5873 L22: 5.1518 REMARK 3 L33: 0.6883 L12: -2.5592 REMARK 3 L13: 1.0113 L23: -1.8331 REMARK 3 S TENSOR REMARK 3 S11: -0.3411 S12: -0.0639 S13: 0.3956 REMARK 3 S21: 0.7105 S22: 0.2312 S23: -1.0697 REMARK 3 S31: -0.3664 S32: 0.1470 S33: 0.0937 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6568 53.2794 80.5803 REMARK 3 T TENSOR REMARK 3 T11: 0.1072 T22: 0.0979 REMARK 3 T33: 0.0919 T12: -0.0126 REMARK 3 T13: 0.0060 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.5988 L22: 2.4951 REMARK 3 L33: 1.1678 L12: 0.1109 REMARK 3 L13: -0.0983 L23: -0.5105 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: 0.0047 S13: 0.0735 REMARK 3 S21: -0.0462 S22: 0.0261 S23: -0.1872 REMARK 3 S31: -0.0636 S32: 0.0972 S33: -0.0400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006226. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 44.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.58400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOTHER LIQUOR: 15% (W/V) PEG 3350, 0.1 REMARK 280 M HEPES, PH 7.5 MIXED EQUAL VOLUMES OF 10 MG/ML ETFAB IN 300 MM REMARK 280 NACL, 20 MM HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.94050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.94050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 293 REMARK 465 ASN A 294 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 404 O HOH A 662 1.93 REMARK 500 O HOH B 595 O HOH A 662 1.97 REMARK 500 O HOH A 412 O HOH A 667 1.97 REMARK 500 O HOH A 412 O HOH A 469 1.99 REMARK 500 O HOH A 682 O HOH A 758 2.04 REMARK 500 O HOH B 603 O HOH B 652 2.05 REMARK 500 O HOH B 646 O HOH B 731 2.06 REMARK 500 O HOH B 477 O HOH B 733 2.08 REMARK 500 O HOH B 559 O HOH B 679 2.10 REMARK 500 OG1 THR A 76 O HOH A 401 2.10 REMARK 500 O HOH B 418 O HOH A 533 2.11 REMARK 500 O HOH B 578 O HOH B 624 2.11 REMARK 500 O HOH B 758 O HOH A 680 2.11 REMARK 500 O HOH B 439 O HOH B 706 2.13 REMARK 500 O HOH A 497 O HOH A 633 2.13 REMARK 500 O HOH B 427 O HOH A 467 2.14 REMARK 500 O HOH A 465 O HOH A 665 2.16 REMARK 500 O HOH B 427 O HOH A 413 2.17 REMARK 500 O HOH A 669 O HOH A 679 2.17 REMARK 500 O HOH A 684 O HOH A 735 2.18 REMARK 500 O HOH B 645 O HOH B 714 2.19 REMARK 500 O HOH A 676 O HOH A 728 2.19 REMARK 500 O HOH A 670 O HOH A 672 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 660 O HOH B 723 4556 2.15 REMARK 500 O HOH B 578 O HOH A 422 3656 2.16 REMARK 500 O HOH B 596 O HOH B 606 4556 2.19 REMARK 500 O HOH B 624 O HOH A 684 3656 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 12 115.09 -33.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 763 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 764 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A 765 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A 766 DISTANCE = 6.29 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 301 DBREF 5OW0 B 2 251 UNP Q39VG5 Q39VG5_GEOMG 2 251 DBREF 5OW0 A 2 294 UNP Q39VG4 Q39VG4_GEOMG 2 294 SEQADV 5OW0 MSE B 1 UNP Q39VG5 INITIATING METHIONINE SEQADV 5OW0 MSE A 1 UNP Q39VG4 INITIATING METHIONINE SEQRES 1 B 251 MSE GLN ILE VAL VAL LEU ALA LYS VAL VAL PRO ASP TYR SEQRES 2 B 251 GLU VAL PRO SER ALA ASP PHE GLU LEU VAL GLY ASN ARG SEQRES 3 B 251 ALA HIS PRO ARG TYR THR ARG MSE ILE GLY LEU TYR ASP SEQRES 4 B 251 GLU ASN ALA VAL GLU LEU GLY VAL GLN LEU LYS GLU LYS SEQRES 5 B 251 LEU GLY ALA ASP LEU THR VAL VAL SER TYR GLY ARG ASN SEQRES 6 B 251 ASP ASP VAL GLN PHE LEU ARG LYS ALA LEU ALA MSE GLY SEQRES 7 B 251 ALA ASP LYS VAL VAL LEU VAL GLU GLY ASP SER ASP ASP SEQRES 8 B 251 PRO TYR VAL ILE ALA ALA ASN LEU LYS ASP ALA ILE ASP SEQRES 9 B 251 ARG GLN GLY THR VAL ASP LEU ILE LEU ALA GLY ARG GLN SEQRES 10 B 251 SER SER ASP MSE ASP ARG GLY VAL VAL PRO GLY VAL LEU SEQRES 11 B 251 ALA GLY MSE LEU ASP LEU PRO PHE VAL PRO GLN ALA CYS SEQRES 12 B 251 SER VAL GLU SER VAL ASP GLY GLY TRP LYS ILE SER GLN SEQRES 13 B 251 ILE THR GLU THR GLY LYS ARG LEU LEU LYS LEU SER GLY SEQRES 14 B 251 LYS GLY VAL LEU SER ILE THR SER VAL PRO GLU ASN VAL SEQRES 15 B 251 PRO ARG ILE PRO ALA VAL LYS ALA ILE PHE ALA ALA LYS SEQRES 16 B 251 LYS LYS PRO VAL GLU LYS LEU PRO GLU ILE GLY THR GLY SEQRES 17 B 251 LYS MSE ALA VAL SER GLU LEU SER VAL SER ILE PRO LYS SEQRES 18 B 251 VAL GLU SER ASN CYS GLU LEU ILE PRO ALA GLU ASP MSE SEQRES 19 B 251 ASP ASP ALA VAL ARG VAL LEU LEU ARG ARG LEU LYS GLU SEQRES 20 B 251 GLU ARG TYR LEU SEQRES 1 A 294 MSE LYS THR LEU ILE ILE GLU THR ALA ASN ALA LYS ILE SEQRES 2 A 294 LEU GLY GLU LEU VAL THR VAL SER ARG LEU PHE GLY GLN SEQRES 3 A 294 ALA PRO ASP VAL VAL VAL LEU GLY SER GLY GLU LEU GLN SEQRES 4 A 294 GLY SER TYR GLY LYS ALA TYR ARG LEU SER ASP THR LEU SEQRES 5 A 294 GLY ALA ASN LEU GLY SER SER LEU SER ASP LEU ILE LYS SEQRES 6 A 294 ARG GLU ARG TYR GLU LEU ILE LEU LEU SER THR THR ALA SEQRES 7 A 294 ILE GLY SER GLY LEU ALA GLY PRO LEU ALA VAL SER LEU SEQRES 8 A 294 GLY ALA PRO ILE LEU SER GLU VAL THR ALA ILE SER PRO SEQRES 9 A 294 ASP LEU THR ILE GLU ARG SER LEU TYR GLY SER LYS ALA SEQRES 10 A 294 VAL ALA ARG TYR LYS LEU GLU SER GLY PRO LEU VAL LEU SEQRES 11 A 294 THR ILE LYS ARG LYS TYR PHE GLU ALA ALA THR LEU GLU SEQRES 12 A 294 GLY THR THR ALA THR GLU GLU LEU PRO VAL GLY PRO GLN SEQRES 13 A 294 LYS ILE THR LEU LEU GLU GLU ILE GLU GLU GLU ARG THR SEQRES 14 A 294 GLY ILE PRO LEU GLU ASP ALA GLU VAL VAL VAL THR GLY SEQRES 15 A 294 GLY ARG GLY ILE GLY SER GLY ASP ASN PHE SER ILE LEU SEQRES 16 A 294 LYS GLU ILE ALA GLY MSE LEU ASN GLY ALA VAL GLY ALA SEQRES 17 A 294 SER ARG GLY ALA VAL ASP GLU GLY TRP MSE PRO PRO GLY SEQRES 18 A 294 ALA GLN ILE GLY GLN THR GLY LYS ILE VAL ALA PRO THR SEQRES 19 A 294 VAL TYR PHE ALA VAL GLY VAL SER GLY ALA SER GLN HIS SEQRES 20 A 294 LEU ALA GLY ILE SER ASN ALA LYS CYS VAL ILE ALA ILE SEQRES 21 A 294 ASN LYS ASP ASN GLU ALA ASN ILE PHE LYS ARG ALA ARG SEQRES 22 A 294 PHE GLY ILE VAL GLY ASP TYR LYS LYS ALA VAL PRO ALA SEQRES 23 A 294 LEU ILE ASN ALA LEU LYS GLU ASN MODRES 5OW0 MSE B 34 MET MODIFIED RESIDUE MODRES 5OW0 MSE B 77 MET MODIFIED RESIDUE MODRES 5OW0 MSE B 121 MET MODIFIED RESIDUE MODRES 5OW0 MSE B 133 MET MODIFIED RESIDUE MODRES 5OW0 MSE B 210 MET MODIFIED RESIDUE MODRES 5OW0 MSE B 234 MET MODIFIED RESIDUE MODRES 5OW0 MSE A 201 MET MODIFIED RESIDUE MODRES 5OW0 MSE A 218 MET MODIFIED RESIDUE HET MSE B 1 19 HET MSE B 34 17 HET MSE B 77 17 HET MSE B 121 17 HET MSE B 133 17 HET MSE B 210 17 HET MSE B 234 17 HET MSE A 1 19 HET MSE A 201 17 HET MSE A 218 17 HET AMP B 301 29 HET FAD A 301 84 HETNAM MSE SELENOMETHIONINE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 4 FAD C27 H33 N9 O15 P2 FORMUL 5 HOH *738(H2 O) HELIX 1 AA1 PRO B 16 PHE B 20 5 5 HELIX 2 AA2 GLY B 36 GLY B 54 1 19 HELIX 3 AA3 ARG B 64 ASP B 66 5 3 HELIX 4 AA4 ASP B 67 GLY B 78 1 12 HELIX 5 AA5 ASP B 91 ARG B 105 1 15 HELIX 6 AA6 VAL B 125 ASP B 135 1 11 HELIX 7 AA7 VAL B 178 VAL B 182 5 5 HELIX 8 AA8 ALA B 187 LYS B 195 1 9 HELIX 9 AA9 ASP B 233 GLU B 248 1 16 HELIX 10 AB1 ASN A 10 GLY A 25 1 16 HELIX 11 AB2 LEU A 52 LEU A 56 5 5 HELIX 12 AB3 SER A 58 ARG A 68 1 11 HELIX 13 AB4 THR A 77 GLY A 92 1 16 HELIX 14 AB5 PRO A 172 ALA A 176 5 5 HELIX 15 AB6 ARG A 184 GLY A 187 5 4 HELIX 16 AB7 GLY A 189 ASN A 191 5 3 HELIX 17 AB8 PHE A 192 LEU A 202 1 11 HELIX 18 AB9 SER A 209 GLU A 215 1 7 HELIX 19 AC1 PRO A 219 GLN A 223 5 5 HELIX 20 AC2 ALA A 244 ALA A 249 1 6 HELIX 21 AC3 ALA A 266 ARG A 271 5 6 HELIX 22 AC4 ASP A 279 LYS A 292 1 14 SHEET 1 AA110 VAL B 199 LEU B 202 0 SHEET 2 AA110 LYS B 81 GLU B 86 1 N LEU B 84 O GLU B 200 SHEET 3 AA110 ASP B 56 GLY B 63 1 N VAL B 59 O LYS B 81 SHEET 4 AA110 GLN B 2 LEU B 6 1 N ILE B 3 O ASP B 56 SHEET 5 AA110 LEU B 111 GLY B 115 1 O LEU B 113 N LEU B 6 SHEET 6 AA110 VAL B 172 ILE B 175 1 O LEU B 173 N ILE B 112 SHEET 7 AA110 PHE B 138 VAL B 148 1 N ALA B 142 O SER B 174 SHEET 8 AA110 GLY B 151 ILE B 157 -1 O LYS B 153 N GLU B 146 SHEET 9 AA110 GLY B 161 SER B 168 -1 O LEU B 165 N ILE B 154 SHEET 10 AA110 ILE A 158 GLU A 165 -1 O ILE A 164 N LYS B 162 SHEET 1 AA2 2 VAL B 9 PRO B 11 0 SHEET 2 AA2 2 ARG B 33 ILE B 35 -1 O MSE B 34 N VAL B 10 SHEET 1 AA3 2 LEU B 22 VAL B 23 0 SHEET 2 AA3 2 ARG B 26 ALA B 27 -1 O ARG B 26 N VAL B 23 SHEET 1 AA4 4 VAL B 212 SER B 218 0 SHEET 2 AA4 4 ALA A 117 LEU A 123 -1 O LYS A 122 N SER B 213 SHEET 3 AA4 4 ILE A 108 LEU A 112 -1 N ARG A 110 O ALA A 119 SHEET 4 AA4 4 ALA A 101 ILE A 102 -1 N ALA A 101 O GLU A 109 SHEET 1 AA5 6 GLU B 227 LEU B 228 0 SHEET 2 AA5 6 PHE A 274 VAL A 277 1 O GLY A 275 N GLU B 227 SHEET 3 AA5 6 CYS A 256 ASN A 261 1 N ALA A 259 O ILE A 276 SHEET 4 AA5 6 VAL A 235 VAL A 239 1 N ALA A 238 O ILE A 258 SHEET 5 AA5 6 VAL A 178 GLY A 182 1 N VAL A 179 O PHE A 237 SHEET 6 AA5 6 ALA A 205 ALA A 208 1 O ALA A 205 N VAL A 180 SHEET 1 AA6 7 ILE A 95 VAL A 99 0 SHEET 2 AA6 7 LEU A 128 ILE A 132 1 O THR A 131 N VAL A 99 SHEET 3 AA6 7 LEU A 71 SER A 75 1 N ILE A 72 O LEU A 130 SHEET 4 AA6 7 THR A 3 GLU A 7 1 N LEU A 4 O LEU A 71 SHEET 5 AA6 7 ASP A 29 LEU A 33 1 O ASP A 29 N ILE A 5 SHEET 6 AA6 7 ALA A 45 LEU A 48 1 O TYR A 46 N VAL A 32 SHEET 7 AA6 7 GLU A 149 GLU A 150 1 O GLU A 149 N ALA A 45 LINK C MSE B 1 N GLN B 2 1555 1555 1.34 LINK C ARG B 33 N MSE B 34 1555 1555 1.33 LINK C MSE B 34 N ILE B 35 1555 1555 1.32 LINK C ALA B 76 N MSE B 77 1555 1555 1.33 LINK C MSE B 77 N GLY B 78 1555 1555 1.33 LINK C ASP B 120 N MSE B 121 1555 1555 1.32 LINK C MSE B 121 N AASP B 122 1555 1555 1.33 LINK C MSE B 121 N BASP B 122 1555 1555 1.34 LINK C GLY B 132 N MSE B 133 1555 1555 1.33 LINK C MSE B 133 N LEU B 134 1555 1555 1.33 LINK C LYS B 209 N MSE B 210 1555 1555 1.32 LINK C MSE B 210 N ALA B 211 1555 1555 1.33 LINK C ASP B 233 N MSE B 234 1555 1555 1.33 LINK C MSE B 234 N ASP B 235 1555 1555 1.32 LINK C MSE A 1 N LYS A 2 1555 1555 1.32 LINK C GLY A 200 N MSE A 201 1555 1555 1.33 LINK C MSE A 201 N LEU A 202 1555 1555 1.34 LINK C TRP A 217 N MSE A 218 1555 1555 1.33 LINK C MSE A 218 N PRO A 219 1555 1555 1.34 CISPEP 1 GLY A 126 PRO A 127 0 1.48 SITE 1 AC1 15 LEU B 6 ALA B 7 ASP B 39 TYR B 62 SITE 2 AC1 15 ILE B 95 ALA B 114 GLY B 115 GLN B 117 SITE 3 AC1 15 SER B 118 ARG B 123 GLY B 124 VAL B 125 SITE 4 AC1 15 VAL B 126 PRO B 127 HOH B 442 SITE 1 AC2 38 GLY A 183 ARG A 184 GLY A 185 SER A 209 SITE 2 AC2 38 ARG A 210 GLN A 223 ILE A 224 GLY A 225 SITE 3 AC2 38 GLN A 226 THR A 227 GLY A 228 GLY A 240 SITE 4 AC2 38 VAL A 241 SER A 242 ALA A 244 GLN A 246 SITE 5 AC2 38 HIS A 247 ASN A 261 LYS A 262 ASP A 263 SITE 6 AC2 38 GLY A 278 ASP A 279 TYR A 280 HOH A 413 SITE 7 AC2 38 HOH A 429 HOH A 444 HOH A 449 HOH A 467 SITE 8 AC2 38 HOH A 488 HOH A 516 HOH A 608 HOH A 611 SITE 9 AC2 38 HOH A 637 LEU B 37 TYR B 38 SER B 119 SITE 10 AC2 38 ASP B 122 HOH B 427 CRYST1 54.730 72.750 133.881 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018272 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013746 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007469 0.00000 HETATM 1 N MSE B 1 54.014 8.820 78.104 1.00 25.09 N ANISOU 1 N MSE B 1 2935 2706 3893 832 507 -96 N HETATM 2 CA MSE B 1 53.513 9.987 78.983 1.00 26.64 C ANISOU 2 CA MSE B 1 3049 2940 4134 744 320 -141 C HETATM 3 C MSE B 1 52.379 10.790 78.378 1.00 22.63 C ANISOU 3 C MSE B 1 2626 2478 3494 628 376 -129 C HETATM 4 O MSE B 1 52.431 11.125 77.195 1.00 25.26 O ANISOU 4 O MSE B 1 2956 2800 3840 614 555 -71 O HETATM 5 CB MSE B 1 54.650 10.930 79.271 1.00 33.43 C ANISOU 5 CB MSE B 1 3620 3755 5327 762 253 -136 C HETATM 6 CG MSE B 1 54.273 11.950 80.245 1.00 33.63 C ANISOU 6 CG MSE B 1 3590 3797 5392 705 33 -200 C HETATM 7 SE MSE B 1 55.732 13.139 80.792 0.64 88.01 SE ANISOU 7 SE MSE B 1 10095 10586 12758 726 -141 -227 SE HETATM 8 CE MSE B 1 55.674 12.765 82.673 1.00 22.03 C ANISOU 8 CE MSE B 1 1849 2226 4294 831 -526 -362 C HETATM 9 H1 MSE B 1 54.676 8.397 78.522 1.00 30.11 H HETATM 10 H2 MSE B 1 53.345 8.251 77.956 1.00 30.11 H HETATM 11 H3 MSE B 1 54.309 9.139 77.327 1.00 30.11 H HETATM 12 HA MSE B 1 53.214 9.623 79.830 1.00 31.97 H HETATM 13 HB2 MSE B 1 55.409 10.434 79.616 1.00 40.12 H HETATM 14 HB3 MSE B 1 54.881 11.381 78.447 1.00 40.12 H HETATM 15 HG2 MSE B 1 53.579 12.512 79.868 1.00 40.36 H HETATM 16 HG3 MSE B 1 53.939 11.509 81.042 1.00 40.36 H HETATM 17 HE1 MSE B 1 56.320 13.328 83.127 1.00 26.43 H HETATM 18 HE2 MSE B 1 54.782 12.951 83.004 1.00 26.43 H HETATM 19 HE3 MSE B 1 55.892 11.831 82.813 1.00 26.43 H