HEADER LIPID BINDING PROTEIN 31-AUG-17 5OWC TITLE INDOLE-2 CARBOXAMIDES AS SELECTIVE SECRETED PHOSPHOLIPASE A2 TYPE X TITLE 2 (SPLA2-X) INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROUP 10 SECRETORY PHOSPHOLIPASE A2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GROUP X SECRETORY PHOSPHOLIPASE A2,SPLA2-X, COMPND 5 PHOSPHATIDYLCHOLINE 2-ACYLHYDROLASE 10; COMPND 6 EC: 3.1.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLA2G10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET24 KEYWDS INHIBITOR, SECRETED, PHOSPHOLIPASE, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.S.SANDMARK,R.G.ROTH,L.KNERR,C.BODIN,D.PETTERSEN REVDAT 3 20-NOV-24 5OWC 1 REMARK REVDAT 2 05-MAY-21 5OWC 1 JRNL REMARK LINK REVDAT 1 01-AUG-18 5OWC 0 JRNL AUTH L.KNERR,F.GIORDANETTO,P.NORDBERG,D.PETTERSEN,N.SELMI, JRNL AUTH 2 H.G.BEISEL,H.DE LA MOTTE,T.OLSSON,T.D.J.PERKINS,M.HERSLOF, JRNL AUTH 3 A.MANSSON,M.DAHLSTROM,I.STARKE,J.BRODDEFALK,G.SAARINEN, JRNL AUTH 4 F.KLINGEGARD,E.HURT-CAMEJO,B.ROSENGREN,J.BRENGDAHL,F.JANSEN, JRNL AUTH 5 M.ROHMAN,J.SANDMARK,K.HALLBERG,T.AKERUD,R.G.ROTH,M.AHLQVIST JRNL TITL DISCOVERY OF A SERIES OF INDOLE-2 CARBOXAMIDES AS SELECTIVE JRNL TITL 2 SECRETED PHOSPHOLIPASE A2TYPE X (SPLA2-X) INHIBITORS. JRNL REF ACS MED.CHEM.LETT. V. 9 594 2018 JRNL REFN ISSN 1948-5875 JRNL PMID 30034585 JRNL DOI 10.1021/ACSMEDCHEMLETT.7B00505 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 23362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1244 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1430 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1874 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 116 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.375 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2094 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1846 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2843 ; 1.283 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4296 ; 0.918 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 4.791 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;33.722 ;24.831 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 319 ;16.462 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;12.881 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 282 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2355 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 445 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5OWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6-5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRIRS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25650 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 25.186 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.65100 REMARK 200 R SYM FOR SHELL (I) : 0.65100 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37-45% PEG400 0.1M BIS-TRIS PH 5.6 REMARK 280 -5.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 13.92500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.72000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.25500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.72000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 13.92500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.25500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 37 -169.63 -162.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 26 O REMARK 620 2 GLY A 28 O 91.0 REMARK 620 3 GLY A 30 O 90.1 79.0 REMARK 620 4 ASP A 47 OD1 107.9 145.8 127.7 REMARK 620 5 ASP A 47 OD2 92.8 158.3 79.7 51.5 REMARK 620 6 AYZ A 202 O12 79.7 76.8 153.5 78.9 124.9 REMARK 620 7 AYZ A 202 O27 176.7 85.7 89.1 75.1 90.2 99.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 26 O REMARK 620 2 GLY B 28 O 90.9 REMARK 620 3 GLY B 30 O 90.4 80.2 REMARK 620 4 ASP B 47 OD1 105.4 147.3 126.7 REMARK 620 5 ASP B 47 OD2 90.4 159.1 79.0 51.1 REMARK 620 6 AYZ B 202 O28 172.4 83.8 94.1 76.7 96.5 REMARK 620 7 AYZ B 202 O12 77.8 75.7 152.8 80.3 124.8 95.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AYZ A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AYZ B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OW8 RELATED DB: PDB REMARK 900 5OW8 CONTAINS THE SAME PROTEIN IN COMPLEX WITH ADIFFERENT SMALL REMARK 900 MOLECULE INHIBITOR DBREF 5OWC A 1 122 UNP O15496 PA2GX_HUMAN 43 164 DBREF 5OWC B 1 122 UNP O15496 PA2GX_HUMAN 43 164 SEQRES 1 A 122 GLY ILE LEU GLU LEU ALA GLY THR VAL GLY CYS VAL GLY SEQRES 2 A 122 PRO ARG THR PRO ILE ALA TYR MET LYS TYR GLY CYS PHE SEQRES 3 A 122 CYS GLY LEU GLY GLY HIS GLY GLN PRO ARG ASP ALA ILE SEQRES 4 A 122 ASP TRP CYS CYS HIS GLY HIS ASP CYS CYS TYR THR ARG SEQRES 5 A 122 ALA GLU GLU ALA GLY CYS SER PRO LYS THR GLU ARG TYR SEQRES 6 A 122 SER TRP GLN CYS VAL ASN GLN SER VAL LEU CYS GLY PRO SEQRES 7 A 122 ALA GLU ASN LYS CYS GLN GLU LEU LEU CYS LYS CYS ASP SEQRES 8 A 122 GLN GLU ILE ALA ASN CYS LEU ALA GLN THR GLU TYR ASN SEQRES 9 A 122 LEU LYS TYR LEU PHE TYR PRO GLN PHE LEU CYS GLU PRO SEQRES 10 A 122 ASP SER PRO LYS CYS SEQRES 1 B 122 GLY ILE LEU GLU LEU ALA GLY THR VAL GLY CYS VAL GLY SEQRES 2 B 122 PRO ARG THR PRO ILE ALA TYR MET LYS TYR GLY CYS PHE SEQRES 3 B 122 CYS GLY LEU GLY GLY HIS GLY GLN PRO ARG ASP ALA ILE SEQRES 4 B 122 ASP TRP CYS CYS HIS GLY HIS ASP CYS CYS TYR THR ARG SEQRES 5 B 122 ALA GLU GLU ALA GLY CYS SER PRO LYS THR GLU ARG TYR SEQRES 6 B 122 SER TRP GLN CYS VAL ASN GLN SER VAL LEU CYS GLY PRO SEQRES 7 B 122 ALA GLU ASN LYS CYS GLN GLU LEU LEU CYS LYS CYS ASP SEQRES 8 B 122 GLN GLU ILE ALA ASN CYS LEU ALA GLN THR GLU TYR ASN SEQRES 9 B 122 LEU LYS TYR LEU PHE TYR PRO GLN PHE LEU CYS GLU PRO SEQRES 10 B 122 ASP SER PRO LYS CYS HET CA A 201 1 HET AYZ A 202 28 HET DMS A 203 4 HET DMS A 204 4 HET PEG A 205 7 HET PEG A 206 7 HET PEG A 207 7 HET PEG A 208 7 HET CA B 201 1 HET AYZ B 202 28 HET DMS B 203 4 HET DMS B 204 4 HET PEG B 205 7 HET PEG B 206 7 HETNAM CA CALCIUM ION HETNAM AYZ 3-[3-[2-AMINOCARBONYL-6-(TRIFLUOROMETHYLOXY)INDOL-1- HETNAM 2 AYZ YL]PHENYL]PROPANOIC ACID HETNAM DMS DIMETHYL SULFOXIDE HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 CA 2(CA 2+) FORMUL 4 AYZ 2(C19 H15 F3 N2 O4) FORMUL 5 DMS 4(C2 H6 O S) FORMUL 7 PEG 6(C4 H10 O3) FORMUL 17 HOH *89(H2 O) HELIX 1 AA1 GLY A 1 GLY A 13 1 13 HELIX 2 AA2 THR A 16 MET A 21 5 6 HELIX 3 AA3 ASP A 37 ALA A 56 1 20 HELIX 4 AA4 ASN A 81 GLN A 100 1 20 HELIX 5 AA5 ASN A 104 LEU A 108 5 5 HELIX 6 AA6 PRO A 111 CYS A 115 5 5 HELIX 7 AA7 ILE B 2 GLY B 13 1 12 HELIX 8 AA8 THR B 16 MET B 21 5 6 HELIX 9 AA9 ASP B 37 ALA B 56 1 20 HELIX 10 AB1 ASN B 81 GLN B 100 1 20 HELIX 11 AB2 ASN B 104 LEU B 108 5 5 HELIX 12 AB3 PRO B 111 CYS B 115 5 5 SHEET 1 AA1 2 TRP A 67 VAL A 70 0 SHEET 2 AA1 2 SER A 73 CYS A 76 -1 O LEU A 75 N GLN A 68 SHEET 1 AA2 2 TRP B 67 VAL B 70 0 SHEET 2 AA2 2 SER B 73 CYS B 76 -1 O SER B 73 N VAL B 70 SSBOND 1 CYS A 11 CYS A 69 1555 1555 2.01 SSBOND 2 CYS A 25 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 27 CYS A 43 1555 1555 2.04 SSBOND 4 CYS A 42 CYS A 97 1555 1555 2.04 SSBOND 5 CYS A 48 CYS A 122 1555 1555 2.03 SSBOND 6 CYS A 49 CYS A 90 1555 1555 2.04 SSBOND 7 CYS A 58 CYS A 83 1555 1555 2.02 SSBOND 8 CYS A 76 CYS A 88 1555 1555 2.03 SSBOND 9 CYS B 11 CYS B 69 1555 1555 2.03 SSBOND 10 CYS B 25 CYS B 115 1555 1555 2.01 SSBOND 11 CYS B 27 CYS B 43 1555 1555 2.05 SSBOND 12 CYS B 42 CYS B 97 1555 1555 2.03 SSBOND 13 CYS B 48 CYS B 122 1555 1555 2.02 SSBOND 14 CYS B 49 CYS B 90 1555 1555 2.03 SSBOND 15 CYS B 58 CYS B 83 1555 1555 2.02 SSBOND 16 CYS B 76 CYS B 88 1555 1555 2.03 LINK O PHE A 26 CA CA A 201 1555 1555 2.28 LINK O GLY A 28 CA CA A 201 1555 1555 2.34 LINK O GLY A 30 CA CA A 201 1555 1555 2.38 LINK OD1 ASP A 47 CA CA A 201 1555 1555 2.52 LINK OD2 ASP A 47 CA CA A 201 1555 1555 2.50 LINK CA CA A 201 O12 AYZ A 202 1555 1555 2.46 LINK CA CA A 201 O27 AYZ A 202 1555 1555 2.34 LINK O PHE B 26 CA CA B 201 1555 1555 2.31 LINK O GLY B 28 CA CA B 201 1555 1555 2.33 LINK O GLY B 30 CA CA B 201 1555 1555 2.31 LINK OD1 ASP B 47 CA CA B 201 1555 1555 2.53 LINK OD2 ASP B 47 CA CA B 201 1555 1555 2.51 LINK CA CA B 201 O28 AYZ B 202 1555 1555 2.27 LINK CA CA B 201 O12 AYZ B 202 1555 1555 2.45 CISPEP 1 GLY A 77 PRO A 78 0 -0.69 CISPEP 2 GLY B 13 PRO B 14 0 8.20 CISPEP 3 GLY B 77 PRO B 78 0 -3.35 SITE 1 AC1 5 PHE A 26 GLY A 28 GLY A 30 ASP A 47 SITE 2 AC1 5 AYZ A 202 SITE 1 AC2 15 ILE A 2 LEU A 5 PRO A 17 TYR A 20 SITE 2 AC2 15 MET A 21 PHE A 26 GLY A 28 LEU A 29 SITE 3 AC2 15 GLY A 30 CYS A 43 HIS A 46 ASP A 47 SITE 4 AC2 15 ILE A 94 CA A 201 LEU B 114 SITE 1 AC3 3 GLY A 24 CYS A 27 LEU A 29 SITE 1 AC4 4 LEU A 75 CYS A 76 GLN A 92 ALA B 79 SITE 1 AC5 1 ALA A 19 SITE 1 AC6 4 TYR A 65 SER A 66 GLU A 80 LEU B 75 SITE 1 AC7 4 ILE A 2 ASN A 71 GLN A 72 HOH A 342 SITE 1 AC8 4 ARG A 15 THR A 16 LEU B 105 LEU B 108 SITE 1 AC9 5 PHE B 26 GLY B 28 GLY B 30 ASP B 47 SITE 2 AC9 5 AYZ B 202 SITE 1 AD1 19 PHE A 113 ILE B 2 LEU B 5 ALA B 6 SITE 2 AD1 19 PRO B 17 ILE B 18 TYR B 20 MET B 21 SITE 3 AD1 19 PHE B 26 CYS B 27 GLY B 28 LEU B 29 SITE 4 AD1 19 GLY B 30 CYS B 43 HIS B 46 ASP B 47 SITE 5 AD1 19 TYR B 50 ILE B 94 CA B 201 SITE 1 AD2 5 GLY B 24 CYS B 27 GLY B 28 LEU B 29 SITE 2 AD2 5 GLY B 30 SITE 1 AD3 3 ALA A 79 CYS B 76 GLN B 92 SITE 1 AD4 2 TRP A 67 HOH B 304 SITE 1 AD5 4 LEU A 75 TYR B 65 SER B 66 GLU B 80 CRYST1 27.850 86.510 103.440 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035907 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011559 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009667 0.00000 CONECT 75 540 CONECT 190 911 CONECT 194 1917 CONECT 207 323 CONECT 211 1917 CONECT 223 1917 CONECT 317 752 CONECT 323 207 CONECT 354 1917 CONECT 355 1917 CONECT 361 963 CONECT 367 699 CONECT 435 639 CONECT 540 75 CONECT 591 684 CONECT 639 435 CONECT 684 591 CONECT 699 367 CONECT 752 317 CONECT 911 190 CONECT 963 361 CONECT 1040 1496 CONECT 1152 1862 CONECT 1156 1982 CONECT 1169 1285 CONECT 1173 1982 CONECT 1185 1982 CONECT 1279 1703 CONECT 1285 1169 CONECT 1316 1982 CONECT 1317 1982 CONECT 1323 1914 CONECT 1329 1650 CONECT 1397 1595 CONECT 1496 1040 CONECT 1547 1635 CONECT 1595 1397 CONECT 1635 1547 CONECT 1650 1329 CONECT 1703 1279 CONECT 1862 1152 CONECT 1914 1323 CONECT 1917 194 211 223 354 CONECT 1917 355 1937 1945 CONECT 1918 1919 1933 CONECT 1919 1918 1920 CONECT 1920 1919 1932 1938 CONECT 1921 1922 1923 1935 CONECT 1922 1921 1933 CONECT 1923 1921 1936 1937 CONECT 1924 1926 1935 1942 CONECT 1925 1938 1939 1940 1941 CONECT 1926 1924 1927 CONECT 1927 1926 1928 CONECT 1928 1927 1929 CONECT 1929 1928 1930 1942 CONECT 1930 1929 1943 CONECT 1931 1944 CONECT 1932 1920 1934 CONECT 1933 1918 1922 1934 CONECT 1934 1932 1933 1935 CONECT 1935 1921 1924 1934 CONECT 1936 1923 CONECT 1937 1917 1923 CONECT 1938 1920 1925 CONECT 1939 1925 CONECT 1940 1925 CONECT 1941 1925 CONECT 1942 1924 1929 CONECT 1943 1930 1944 CONECT 1944 1931 1943 1945 CONECT 1945 1917 1944 CONECT 1946 1947 1948 1949 CONECT 1947 1946 CONECT 1948 1946 CONECT 1949 1946 CONECT 1950 1951 1952 1953 CONECT 1951 1950 CONECT 1952 1950 CONECT 1953 1950 CONECT 1954 1955 1956 CONECT 1955 1954 CONECT 1956 1954 1957 CONECT 1957 1956 1958 CONECT 1958 1957 1959 CONECT 1959 1958 1960 CONECT 1960 1959 CONECT 1961 1962 1963 CONECT 1962 1961 CONECT 1963 1961 1964 CONECT 1964 1963 1965 CONECT 1965 1964 1966 CONECT 1966 1965 1967 CONECT 1967 1966 CONECT 1968 1969 1970 CONECT 1969 1968 CONECT 1970 1968 1971 CONECT 1971 1970 1972 CONECT 1972 1971 1973 CONECT 1973 1972 1974 CONECT 1974 1973 CONECT 1975 1976 1977 CONECT 1976 1975 CONECT 1977 1975 1978 CONECT 1978 1977 1979 CONECT 1979 1978 1980 CONECT 1980 1979 1981 CONECT 1981 1980 CONECT 1982 1156 1173 1185 1316 CONECT 1982 1317 1996 2002 CONECT 1983 1984 1998 CONECT 1984 1983 1985 CONECT 1985 1984 1997 2003 CONECT 1986 1987 1988 2000 CONECT 1987 1986 1998 CONECT 1988 1986 2001 2002 CONECT 1989 1991 2000 2007 CONECT 1990 2003 2004 2005 2006 CONECT 1991 1989 1992 CONECT 1992 1991 1993 CONECT 1993 1992 1994 CONECT 1994 1993 1995 2007 CONECT 1995 1994 2008 CONECT 1996 1982 2009 CONECT 1997 1985 1999 CONECT 1998 1983 1987 1999 CONECT 1999 1997 1998 2000 CONECT 2000 1986 1989 1999 CONECT 2001 1988 CONECT 2002 1982 1988 CONECT 2003 1985 1990 CONECT 2004 1990 CONECT 2005 1990 CONECT 2006 1990 CONECT 2007 1989 1994 CONECT 2008 1995 2009 CONECT 2009 1996 2008 2010 CONECT 2010 2009 CONECT 2011 2012 2013 2014 CONECT 2012 2011 CONECT 2013 2011 CONECT 2014 2011 CONECT 2015 2016 2017 2018 CONECT 2016 2015 CONECT 2017 2015 CONECT 2018 2015 CONECT 2019 2020 2021 CONECT 2020 2019 CONECT 2021 2019 2022 CONECT 2022 2021 2023 CONECT 2023 2022 2024 CONECT 2024 2023 2025 CONECT 2025 2024 CONECT 2026 2027 2028 CONECT 2027 2026 CONECT 2028 2026 2029 CONECT 2029 2028 2030 CONECT 2030 2029 2031 CONECT 2031 2030 2032 CONECT 2032 2031 MASTER 349 0 14 12 4 0 24 6 2079 2 160 20 END