HEADER HYDROLASE(CARBOXYLIC ESTER) 01-SEP-90 5P2P TITLE X-RAY STRUCTURE OF PHOSPHOLIPASE A2 COMPLEXED WITH A TITLE 2 SUBSTRATE-DERIVED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: PANCREAS KEYWDS HYDROLASE(CARBOXYLIC ESTER) EXPDTA X-RAY DIFFRACTION AUTHOR B.W.DIJKSTRA,M.M.G.M.THUNNISSEN,K.H.KALK,J.DRENTH REVDAT 4 24-FEB-09 5P2P 1 VERSN REVDAT 3 01-APR-03 5P2P 1 JRNL REVDAT 2 15-JUL-92 5P2P 1 FORMUL REVDAT 1 15-OCT-91 5P2P 0 JRNL AUTH M.M.THUNNISSEN,E.AB,K.H.KALK,J.DRENTH,B.W.DIJKSTRA, JRNL AUTH 2 O.P.KUIPERS,R.DIJKMAN,G.H.DE HAAS,H.M.VERHEIJ JRNL TITL X-RAY STRUCTURE OF PHOSPHOLIPASE A2 COMPLEXED WITH JRNL TITL 2 A SUBSTRATE-DERIVED INHIBITOR. JRNL REF NATURE V. 347 689 1990 JRNL REFN ISSN 0028-0836 JRNL PMID 2215698 JRNL DOI 10.1038/347689A0 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.M.G.M.THUNNISSEN,K.H.KALK,J.DRENTH,B.W.DIJKSTRA REMARK 1 TITL STRUCTURE OF AN ENGINEERED PORCINE PHOSPHOLIPASE REMARK 1 TITL 2 A2 WITH ENHANCED ACTIVITY AT 2.1 ANGSTROMS REMARK 1 TITL 3 RESOLUTION. COMPARISON WITH THE WILD-TYPE PORCINE REMARK 1 TITL 4 AND CROTALUS ATROX PHOSPHOLIPASEA2 REMARK 1 REF J.MOL.BIOL. V. 216 425 1990 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH O.P.KUIPERS,M.M.G.M.THUNNISSEN,P.DEGEUS, REMARK 1 AUTH 2 B.W.DIJKSTRA,J.DRENTH,H.M.VERHEIJ,G.H.DEHAAS REMARK 1 TITL ENHANCED ACTIVITY AND ALTERED SPECIFICITY OF REMARK 1 TITL 2 PHOSPHOLIPASE A2 BY DELETION OF A SURFACE LOOP REMARK 1 REF SCIENCE V. 244 82 1989 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 3 REMARK 1 AUTH B.W.DIJKSTRA,R.RENETSEDER,K.H.KALK,W.G.J.HOL, REMARK 1 AUTH 2 J.DRENTH REMARK 1 TITL STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2 REMARK 1 TITL 2 AT 2.6 ANGSTROMS RESOLUTION AND COMPARISON WITH REMARK 1 TITL 3 BOVINE PHOSPHOLIPASE A2 REMARK 1 REF J.MOL.BIOL. V. 168 163 1983 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH B.W.DIJKSTRA,G.J.H.VANNES,K.H.KALK,N.P.BRANDENBURG, REMARK 1 AUTH 2 W.G.J.HOL,J.DRENTH REMARK 1 TITL THE STRUCTURE OF BOVINE PANCREATIC REMARK 1 TITL 2 PROPHOSPHOLIPASE A2 AT 3.0 ANGSTROMS RESOLUTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.B V. 38 793 1982 REMARK 1 REFN ISSN 0108-7681 REMARK 1 REFERENCE 5 REMARK 1 AUTH B.W.DIJKSTRA,J.DRENTH,K.H.KALK REMARK 1 TITL ACTIVE SITE AND CATALYTIC MECHANISM OF REMARK 1 TITL 2 PHOSPHOLIPASE A2 REMARK 1 REF NATURE V. 289 604 1981 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1862 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.012 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5P2P COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.79000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.79000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: REMARK 300 THE ENZYME CRYSTALLIZES AS A DIMER IN THE ASYMMETRIC UNIT. REMARK 300 THE TRANSFORMATION GIVEN ON *MTRIX* RECORDS BELOW YIELDS REMARK 300 OPTIMAL CARBON-ALPHA COORDINATES FOR CHAIN *A* WHEN APPLIED REMARK 300 TO CHAIN *B*. THE RMS DIFFERENCE FOR ALL 119 CARBON-ALPHA REMARK 300 PAIRS IS 0.228 ANGSTROMS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 6 O HOH A 131 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 40 CD GLU A 40 OE2 0.085 REMARK 500 GLU A 81 CD GLU A 81 OE2 0.076 REMARK 500 GLU B 40 CD GLU B 40 OE2 0.084 REMARK 500 GLU B 71 CD GLU B 71 OE2 0.069 REMARK 500 GLU B 81 CD GLU B 81 OE2 0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 39 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 39 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 49 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 54 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 119 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 21 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ASP B 42 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP B 42 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 43 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 49 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 GLU B 81 N - CA - CB ANGL. DEV. = 11.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 -159.00 -165.03 REMARK 500 ASN A 57 -9.47 -160.91 REMARK 500 SER A 78 63.83 -102.66 REMARK 500 ASN A 79 109.35 48.89 REMARK 500 THR A 80 -18.86 68.59 REMARK 500 LYS B 56 23.87 -72.84 REMARK 500 SER B 78 38.84 -89.51 REMARK 500 ASN B 79 73.96 73.94 REMARK 500 THR B 80 -51.41 87.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 149 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH B 167 DISTANCE = 9.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 125 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 30 O REMARK 620 2 GLY A 32 O 77.2 REMARK 620 3 TYR A 28 O 81.1 82.0 REMARK 620 4 ASP A 49 OD1 145.4 137.3 102.6 REMARK 620 5 ASP A 49 OD2 160.2 83.3 93.0 54.3 REMARK 620 6 DHG A 126 O2P 81.7 93.8 162.8 91.8 103.1 REMARK 620 7 DHG A 126 O1 64.4 138.3 76.8 82.7 132.8 96.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 125 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DHG B 127 O2P REMARK 620 2 GLY B 30 O 82.3 REMARK 620 3 GLY B 32 O 86.1 76.4 REMARK 620 4 ASP B 49 OD1 82.1 144.0 134.3 REMARK 620 5 ASP B 49 OD2 95.2 159.6 83.3 54.4 REMARK 620 6 DHG B 127 O1 96.8 75.9 151.4 74.0 124.5 REMARK 620 7 TYR B 28 O 171.0 88.8 93.1 104.7 93.6 79.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 126 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 71 OE1 REMARK 620 2 SER A 72 O 93.7 REMARK 620 3 GLU A 92 OE1 95.8 89.8 REMARK 620 4 SER B 72 O 173.9 81.5 88.0 REMARK 620 5 GLU B 71 OE1 80.4 169.5 99.4 103.7 REMARK 620 6 GLU B 92 OE1 84.1 89.5 179.3 92.1 81.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 125 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 125 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 126 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHG A 126 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHG B 127 DBREF 5P2P A 1 124 UNP P00592 PA21B_PIG 23 146 DBREF 5P2P B 1 124 UNP P00592 PA21B_PIG 23 146 SEQADV 5P2P PHE A 3 UNP P00592 TRP 25 CONFLICT SEQADV 5P2P TRP A 31 UNP P00592 LEU 53 CONFLICT SEQADV 5P2P SER A 59 UNP P00592 ASP 81 CONFLICT SEQADV 5P2P GLY A 60 UNP P00592 SER 82 CONFLICT SEQADV 5P2P A UNP P00592 LYS 84 DELETION SEQADV 5P2P A UNP P00592 PHE 85 DELETION SEQADV 5P2P A UNP P00592 LEU 86 DELETION SEQADV 5P2P A UNP P00592 VAL 87 DELETION SEQADV 5P2P A UNP P00592 ASP 88 DELETION SEQADV 5P2P TYR A 67 UNP P00592 ASN 89 CONFLICT SEQADV 5P2P PHE B 3 UNP P00592 TRP 25 CONFLICT SEQADV 5P2P TRP B 31 UNP P00592 LEU 53 CONFLICT SEQADV 5P2P SER B 59 UNP P00592 ASP 81 CONFLICT SEQADV 5P2P GLY B 60 UNP P00592 SER 82 CONFLICT SEQADV 5P2P B UNP P00592 LYS 84 DELETION SEQADV 5P2P B UNP P00592 PHE 85 DELETION SEQADV 5P2P B UNP P00592 LEU 86 DELETION SEQADV 5P2P B UNP P00592 VAL 87 DELETION SEQADV 5P2P B UNP P00592 ASP 88 DELETION SEQADV 5P2P TYR B 67 UNP P00592 ASN 89 CONFLICT SEQRES 1 A 119 ALA LEU PHE GLN PHE ARG SER MET ILE LYS CYS ALA ILE SEQRES 2 A 119 PRO GLY SER HIS PRO LEU MET ASP PHE ASN ASN TYR GLY SEQRES 3 A 119 CYS TYR CYS GLY TRP GLY GLY SER GLY THR PRO VAL ASP SEQRES 4 A 119 GLU LEU ASP ARG CYS CYS GLU THR HIS ASP ASN CYS TYR SEQRES 5 A 119 ARG ASP ALA LYS ASN LEU SER GLY CYS TYR PRO TYR THR SEQRES 6 A 119 GLU SER TYR SER TYR SER CYS SER ASN THR GLU ILE THR SEQRES 7 A 119 CYS ASN SER LYS ASN ASN ALA CYS GLU ALA PHE ILE CYS SEQRES 8 A 119 ASN CYS ASP ARG ASN ALA ALA ILE CYS PHE SER LYS ALA SEQRES 9 A 119 PRO TYR ASN LYS GLU HIS LYS ASN LEU ASP THR LYS LYS SEQRES 10 A 119 TYR CYS SEQRES 1 B 119 ALA LEU PHE GLN PHE ARG SER MET ILE LYS CYS ALA ILE SEQRES 2 B 119 PRO GLY SER HIS PRO LEU MET ASP PHE ASN ASN TYR GLY SEQRES 3 B 119 CYS TYR CYS GLY TRP GLY GLY SER GLY THR PRO VAL ASP SEQRES 4 B 119 GLU LEU ASP ARG CYS CYS GLU THR HIS ASP ASN CYS TYR SEQRES 5 B 119 ARG ASP ALA LYS ASN LEU SER GLY CYS TYR PRO TYR THR SEQRES 6 B 119 GLU SER TYR SER TYR SER CYS SER ASN THR GLU ILE THR SEQRES 7 B 119 CYS ASN SER LYS ASN ASN ALA CYS GLU ALA PHE ILE CYS SEQRES 8 B 119 ASN CYS ASP ARG ASN ALA ALA ILE CYS PHE SER LYS ALA SEQRES 9 B 119 PRO TYR ASN LYS GLU HIS LYS ASN LEU ASP THR LYS LYS SEQRES 10 B 119 TYR CYS HET CA A 125 1 HET CA B 125 1 HET CA B 126 1 HET DHG A 126 28 HET DHG B 127 28 HETNAM CA CALCIUM ION HETNAM DHG PHOSPHONIC ACID 2-DODECANOYLAMINO-HEXYL ESTER PROPYL HETNAM 2 DHG ESTER FORMUL 3 CA 3(CA 2+) FORMUL 6 DHG 2(C20 H42 N O6 P) FORMUL 8 HOH *126(H2 O) HELIX 1 1 ALA A 1 ILE A 13 1 13 HELIX 2 2 HIS A 17 ASN A 23 1 7 HELIX 3 3 ASP A 39 LYS A 56 1 18 HELIX 4 4 ASN A 89 LYS A 108 1 20 HELIX 5 5 ASN A 112 HIS A 115 5 4 HELIX 6 6 ASP A 119 CYS A 124 1 6 HELIX 7 7 ALA B 1 ILE B 13 1 13 HELIX 8 8 HIS B 17 ASN B 23 1 7 HELIX 9 9 ASP B 39 LYS B 56 1 18 HELIX 10 10 ASN B 89 LYS B 108 1 20 HELIX 11 11 ASN B 112 HIS B 115 5 4 HELIX 12 12 ASP B 119 CYS B 124 1 6 SHEET 1 A 2 TYR A 75 CYS A 77 0 SHEET 2 A 2 ILE A 82 CYS A 84 -1 O THR A 83 N SER A 76 SHEET 1 B 2 TYR B 75 SER B 78 0 SHEET 2 B 2 GLU B 81 CYS B 84 -1 O GLU B 81 N SER B 78 SSBOND 1 CYS A 11 CYS A 77 1555 1555 2.01 SSBOND 2 CYS A 27 CYS A 124 1555 1555 2.04 SSBOND 3 CYS A 29 CYS A 45 1555 1555 2.04 SSBOND 4 CYS A 44 CYS A 105 1555 1555 2.02 SSBOND 5 CYS A 51 CYS A 98 1555 1555 2.05 SSBOND 6 CYS A 61 CYS A 91 1555 1555 2.06 SSBOND 7 CYS A 84 CYS A 96 1555 1555 2.01 SSBOND 8 CYS B 11 CYS B 77 1555 1555 2.03 SSBOND 9 CYS B 27 CYS B 124 1555 1555 2.01 SSBOND 10 CYS B 29 CYS B 45 1555 1555 2.02 SSBOND 11 CYS B 44 CYS B 105 1555 1555 1.98 SSBOND 12 CYS B 51 CYS B 98 1555 1555 2.03 SSBOND 13 CYS B 61 CYS B 91 1555 1555 2.06 SSBOND 14 CYS B 84 CYS B 96 1555 1555 2.00 LINK CA CA A 125 O GLY A 30 1555 1555 2.35 LINK CA CA A 125 O GLY A 32 1555 1555 2.32 LINK CA CA A 125 O TYR A 28 1555 1555 2.62 LINK CA CA A 125 OD1 ASP A 49 1555 1555 2.38 LINK CA CA A 125 OD2 ASP A 49 1555 1555 2.36 LINK CA CA A 125 O2P DHG A 126 1555 1555 2.35 LINK CA CA A 125 O1 DHG A 126 1555 1555 2.57 LINK CA CA B 125 O2P DHG B 127 1555 1555 2.39 LINK CA CA B 125 O GLY B 30 1555 1555 2.36 LINK CA CA B 125 O GLY B 32 1555 1555 2.36 LINK CA CA B 125 OD1 ASP B 49 1555 1555 2.41 LINK CA CA B 125 OD2 ASP B 49 1555 1555 2.37 LINK CA CA B 125 O1 DHG B 127 1555 1555 2.52 LINK CA CA B 125 O TYR B 28 1555 1555 2.50 LINK CA CA B 126 OE1 GLU A 71 1555 1555 2.38 LINK CA CA B 126 O SER A 72 1555 1555 2.47 LINK CA CA B 126 OE1 GLU A 92 1555 1555 2.39 LINK CA CA B 126 O SER B 72 1555 1555 2.37 LINK CA CA B 126 OE1 GLU B 71 1555 1555 2.80 LINK CA CA B 126 OE1 GLU B 92 1555 1555 2.50 SITE 1 AC1 5 TYR A 28 GLY A 30 GLY A 32 ASP A 49 SITE 2 AC1 5 DHG A 126 SITE 1 AC2 5 TYR B 28 GLY B 30 GLY B 32 ASP B 49 SITE 2 AC2 5 DHG B 127 SITE 1 AC3 6 GLU A 71 SER A 72 GLU A 92 GLU B 71 SITE 2 AC3 6 SER B 72 GLU B 92 SITE 1 AC4 16 LEU A 2 PRO A 18 PHE A 22 TYR A 28 SITE 2 AC4 16 GLY A 30 TRP A 31 GLY A 32 HIS A 48 SITE 3 AC4 16 ASP A 49 TYR A 52 TYR A 69 PHE A 106 SITE 4 AC4 16 CA A 125 HOH A 191 TRP B 31 GLY B 32 SITE 1 AC5 19 TRP A 31 GLY A 32 HOH A 191 LEU B 2 SITE 2 AC5 19 ARG B 6 PRO B 18 TYR B 28 GLY B 30 SITE 3 AC5 19 TRP B 31 GLY B 32 CYS B 45 HIS B 48 SITE 4 AC5 19 ASP B 49 TYR B 52 ARG B 53 TYR B 69 SITE 5 AC5 19 PHE B 106 CA B 125 HOH B 129 CRYST1 52.570 62.440 85.580 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019022 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016015 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011685 0.00000 MTRIX1 1 -0.999045 0.043367 0.005395 -18.55100 1 MTRIX2 1 -0.018846 -0.316160 -0.948519 -20.24300 1 MTRIX3 1 -0.039429 -0.947714 0.316676 -14.91400 1