HEADER TRANSCRIPTION 31-MAY-17 5Q0V TITLE LIGAND BINDING TO FARNESOID-X-RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: BILE ACID RECEPTOR; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: FARNESOID X-ACTIVATED RECEPTOR,FARNESOL RECEPTOR HRR-1, COMPND 5 NUCLEAR RECEPTOR SUBFAMILY 1 GROUP H MEMBER 4,RETINOID X RECEPTOR- COMPND 6 INTERACTING PROTEIN 14,RXR-INTERACTING PROTEIN 14; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: COACTIVATOR PEPTIDE SRC-1 HD3; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES 744-757; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NR1H4, BAR, FXR, HRR1, RIP14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS D3R, FXR, DOCKING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.G.RUDOLPH,J.BENZ,D.BURGER,R.THOMA,A.RUF,C.JOSEPH,B.KUHN,C.SHAO, AUTHOR 2 H.YANG,S.K.BURLEY REVDAT 7 17-NOV-21 5Q0V 1 REMARK REVDAT 6 10-FEB-21 5Q0V 1 AUTHOR JRNL REVDAT 5 21-FEB-18 5Q0V 1 REMARK REVDAT 4 31-JAN-18 5Q0V 1 JRNL REVDAT 3 20-DEC-17 5Q0V 1 JRNL REVDAT 2 19-JUL-17 5Q0V 1 AUTHOR JRNL REVDAT 1 05-JUL-17 5Q0V 0 JRNL AUTH Z.GAIEB,S.LIU,S.GATHIAKA,M.CHIU,H.YANG,C.SHAO,V.A.FEHER, JRNL AUTH 2 W.P.WALTERS,B.KUHN,M.G.RUDOLPH,S.K.BURLEY,M.K.GILSON, JRNL AUTH 3 R.E.AMARO JRNL TITL D3R GRAND CHALLENGE 2: BLIND PREDICTION OF PROTEIN-LIGAND JRNL TITL 2 POSES, AFFINITY RANKINGS, AND RELATIVE BINDING FREE JRNL TITL 3 ENERGIES. JRNL REF J. COMPUT. AIDED MOL. DES. V. 32 1 2018 JRNL REFN ESSN 1573-4951 JRNL PMID 29204945 JRNL DOI 10.1007/S10822-017-0088-4 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 47432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2420 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.92 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2999 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.6379 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2848 REMARK 3 BIN R VALUE (WORKING SET) : 0.6346 REMARK 3 BIN FREE R VALUE : 0.6986 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.04 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 151 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3977 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 471 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83710 REMARK 3 B22 (A**2) : -3.81470 REMARK 3 B33 (A**2) : 4.65180 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.300 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.171 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.143 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.160 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.138 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4181 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5659 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1517 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 120 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 585 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4181 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 536 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5275 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.90 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.16 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.30 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 24.1647 21.6818 -6.5707 REMARK 3 T TENSOR REMARK 3 T11: -0.0883 T22: -0.1081 REMARK 3 T33: -0.0344 T12: -0.0312 REMARK 3 T13: -0.0207 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.1010 L22: 1.6773 REMARK 3 L33: 2.6854 L12: -0.0981 REMARK 3 L13: -0.2824 L23: -0.1405 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0572 S13: -0.0808 REMARK 3 S21: -0.0367 S22: -0.0159 S23: -0.0521 REMARK 3 S31: 0.0801 S32: 0.0230 S33: 0.0451 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.9014 41.2227 -5.8338 REMARK 3 T TENSOR REMARK 3 T11: 0.0751 T22: -0.1045 REMARK 3 T33: 0.0389 T12: 0.0087 REMARK 3 T13: -0.0061 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 1.3695 L22: 1.1112 REMARK 3 L33: 2.2252 L12: -0.8640 REMARK 3 L13: 1.0429 L23: -0.6982 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: 0.0071 S13: -0.0421 REMARK 3 S21: -0.0037 S22: 0.0488 S23: 0.0663 REMARK 3 S31: -0.1455 S32: -0.0050 S33: -0.0514 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.2829 -10.9238 34.6402 REMARK 3 T TENSOR REMARK 3 T11: -0.0800 T22: -0.0324 REMARK 3 T33: -0.0878 T12: 0.0521 REMARK 3 T13: -0.0312 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 1.7764 L22: 1.6573 REMARK 3 L33: 1.5042 L12: -0.5661 REMARK 3 L13: 0.2087 L23: -0.2818 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: -0.2056 S13: 0.0453 REMARK 3 S21: 0.0716 S22: 0.0558 S23: -0.0457 REMARK 3 S31: -0.0246 S32: -0.0477 S33: 0.0244 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Q0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1001401357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47479 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 37.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.910 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.81 REMARK 200 R MERGE FOR SHELL (I) : 0.42770 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 25% W/V PEG REMARK 280 3350, EVAPORATION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.78350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.78350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.41600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.41600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 94.78350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.41600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 94.78350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.02300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.41600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 725 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 244 REMARK 465 SER A 245 REMARK 465 HIS A 246 REMARK 465 GLU B 757 REMARK 465 GLY C 244 REMARK 465 SER C 245 REMARK 465 HIS C 246 REMARK 465 LYS D 744 REMARK 465 ASP D 745 REMARK 465 GLU D 757 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 395 45.96 -89.29 REMARK 500 LEU C 395 46.54 -89.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 821 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A 822 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH C 816 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH C 817 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH C 818 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH C 819 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH C 820 DISTANCE = 6.76 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9LS A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9LS C 501 DBREF 5Q0V A 248 476 UNP Q96RI1 NR1H4_HUMAN 258 486 DBREF 5Q0V B 744 757 UNP A8K1V4 A8K1V4_HUMAN 744 757 DBREF 5Q0V C 248 476 UNP Q96RI1 NR1H4_HUMAN 258 486 DBREF 5Q0V D 744 757 UNP A8K1V4 A8K1V4_HUMAN 744 757 SEQADV 5Q0V GLY A 244 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V SER A 245 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V HIS A 246 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V MET A 247 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V ALA A 281 UNP Q96RI1 GLU 291 CONFLICT SEQADV 5Q0V ALA A 354 UNP Q96RI1 GLU 364 CONFLICT SEQADV 5Q0V GLY C 244 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V SER C 245 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V HIS C 246 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V MET C 247 UNP Q96RI1 EXPRESSION TAG SEQADV 5Q0V ALA C 281 UNP Q96RI1 GLU 291 CONFLICT SEQADV 5Q0V ALA C 354 UNP Q96RI1 GLU 364 CONFLICT SEQRES 1 A 233 GLY SER HIS MET GLU LEU THR PRO ASP GLN GLN THR LEU SEQRES 2 A 233 LEU HIS PHE ILE MET ASP SER TYR ASN LYS GLN ARG MET SEQRES 3 A 233 PRO GLN GLU ILE THR ASN LYS ILE LEU LYS GLU ALA PHE SEQRES 4 A 233 SER ALA GLU GLU ASN PHE LEU ILE LEU THR GLU MET ALA SEQRES 5 A 233 THR ASN HIS VAL GLN VAL LEU VAL GLU PHE THR LYS LYS SEQRES 6 A 233 LEU PRO GLY PHE GLN THR LEU ASP HIS GLU ASP GLN ILE SEQRES 7 A 233 ALA LEU LEU LYS GLY SER ALA VAL GLU ALA MET PHE LEU SEQRES 8 A 233 ARG SER ALA GLU ILE PHE ASN LYS LYS LEU PRO SER GLY SEQRES 9 A 233 HIS SER ASP LEU LEU GLU ALA ARG ILE ARG ASN SER GLY SEQRES 10 A 233 ILE SER ASP GLU TYR ILE THR PRO MET PHE SER PHE TYR SEQRES 11 A 233 LYS SER ILE GLY GLU LEU LYS MET THR GLN GLU GLU TYR SEQRES 12 A 233 ALA LEU LEU THR ALA ILE VAL ILE LEU SER PRO ASP ARG SEQRES 13 A 233 GLN TYR ILE LYS ASP ARG GLU ALA VAL GLU LYS LEU GLN SEQRES 14 A 233 GLU PRO LEU LEU ASP VAL LEU GLN LYS LEU CYS LYS ILE SEQRES 15 A 233 HIS GLN PRO GLU ASN PRO GLN HIS PHE ALA CYS LEU LEU SEQRES 16 A 233 GLY ARG LEU THR GLU LEU ARG THR PHE ASN HIS HIS HIS SEQRES 17 A 233 ALA GLU MET LEU MET SER TRP ARG VAL ASN ASP HIS LYS SEQRES 18 A 233 PHE THR PRO LEU LEU CYS GLU ILE TRP ASP VAL GLN SEQRES 1 B 14 LYS ASP HIS GLN LEU LEU ARG TYR LEU LEU ASP LYS ASP SEQRES 2 B 14 GLU SEQRES 1 C 233 GLY SER HIS MET GLU LEU THR PRO ASP GLN GLN THR LEU SEQRES 2 C 233 LEU HIS PHE ILE MET ASP SER TYR ASN LYS GLN ARG MET SEQRES 3 C 233 PRO GLN GLU ILE THR ASN LYS ILE LEU LYS GLU ALA PHE SEQRES 4 C 233 SER ALA GLU GLU ASN PHE LEU ILE LEU THR GLU MET ALA SEQRES 5 C 233 THR ASN HIS VAL GLN VAL LEU VAL GLU PHE THR LYS LYS SEQRES 6 C 233 LEU PRO GLY PHE GLN THR LEU ASP HIS GLU ASP GLN ILE SEQRES 7 C 233 ALA LEU LEU LYS GLY SER ALA VAL GLU ALA MET PHE LEU SEQRES 8 C 233 ARG SER ALA GLU ILE PHE ASN LYS LYS LEU PRO SER GLY SEQRES 9 C 233 HIS SER ASP LEU LEU GLU ALA ARG ILE ARG ASN SER GLY SEQRES 10 C 233 ILE SER ASP GLU TYR ILE THR PRO MET PHE SER PHE TYR SEQRES 11 C 233 LYS SER ILE GLY GLU LEU LYS MET THR GLN GLU GLU TYR SEQRES 12 C 233 ALA LEU LEU THR ALA ILE VAL ILE LEU SER PRO ASP ARG SEQRES 13 C 233 GLN TYR ILE LYS ASP ARG GLU ALA VAL GLU LYS LEU GLN SEQRES 14 C 233 GLU PRO LEU LEU ASP VAL LEU GLN LYS LEU CYS LYS ILE SEQRES 15 C 233 HIS GLN PRO GLU ASN PRO GLN HIS PHE ALA CYS LEU LEU SEQRES 16 C 233 GLY ARG LEU THR GLU LEU ARG THR PHE ASN HIS HIS HIS SEQRES 17 C 233 ALA GLU MET LEU MET SER TRP ARG VAL ASN ASP HIS LYS SEQRES 18 C 233 PHE THR PRO LEU LEU CYS GLU ILE TRP ASP VAL GLN SEQRES 1 D 14 LYS ASP HIS GLN LEU LEU ARG TYR LEU LEU ASP LYS ASP SEQRES 2 D 14 GLU HET 9LS A 501 35 HET 9LS C 501 35 HETNAM 9LS (2S)-2-[2-(4-CHLOROPHENYL)-5,6-DIFLUORO-1H- HETNAM 2 9LS BENZIMIDAZOL-1-YL]-2-CYCLOHEXYL-N-(2-FLUOROPHENYL) HETNAM 3 9LS ACETAMIDE FORMUL 5 9LS 2(C27 H23 CL F3 N3 O) FORMUL 7 HOH *471(H2 O) HELIX 1 AA1 THR A 250 ASN A 265 1 16 HELIX 2 AA2 MET A 269 GLU A 280 1 12 HELIX 3 AA3 SER A 283 LEU A 309 1 27 HELIX 4 AA4 GLY A 311 LEU A 315 5 5 HELIX 5 AA5 ASP A 316 LYS A 342 1 27 HELIX 6 AA6 GLY A 347 ASN A 358 1 12 HELIX 7 AA7 SER A 362 LEU A 379 1 18 HELIX 8 AA8 THR A 382 LEU A 395 1 14 HELIX 9 AA9 ASP A 404 GLN A 427 1 24 HELIX 10 AB1 GLN A 432 THR A 446 1 15 HELIX 11 AB2 THR A 446 SER A 457 1 12 HELIX 12 AB3 THR A 466 TRP A 473 1 8 HELIX 13 AB4 HIS B 746 LYS B 755 1 10 HELIX 14 AB5 THR C 250 ASN C 265 1 16 HELIX 15 AB6 MET C 269 GLU C 280 1 12 HELIX 16 AB7 SER C 283 LEU C 309 1 27 HELIX 17 AB8 GLY C 311 LEU C 315 5 5 HELIX 18 AB9 ASP C 316 LYS C 342 1 27 HELIX 19 AC1 GLY C 347 ASN C 358 1 12 HELIX 20 AC2 SER C 362 LEU C 379 1 18 HELIX 21 AC3 THR C 382 LEU C 395 1 14 HELIX 22 AC4 ASP C 404 GLN C 427 1 24 HELIX 23 AC5 GLN C 432 HIS C 450 1 19 HELIX 24 AC6 HIS C 450 SER C 457 1 8 HELIX 25 AC7 THR C 466 TRP C 473 1 8 HELIX 26 AC8 GLN D 747 LYS D 755 1 9 SSBOND 1 CYS A 436 CYS C 436 1555 4555 2.73 SITE 1 AC1 12 ILE A 273 ILE A 277 ASN A 287 MET A 294 SITE 2 AC1 12 HIS A 298 PHE A 333 SER A 336 ILE A 339 SITE 3 AC1 12 PHE A 340 ILE A 356 SER A 359 TYR A 373 SITE 1 AC2 15 ILE C 273 THR C 274 ILE C 277 ASN C 287 SITE 2 AC2 15 MET C 294 HIS C 298 MET C 332 PHE C 333 SITE 3 AC2 15 SER C 336 ILE C 339 PHE C 340 LEU C 352 SITE 4 AC2 15 ILE C 356 MET C 369 TYR C 373 CRYST1 72.046 84.832 189.567 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013880 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005275 0.00000