HEADER HYDROLASE 11-JUL-17 5QAX TITLE OXA-48 IN COMPLEX WITH COMPOUND 28 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLA OXA-48, BLAOXA-48, KPE71T_00045; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXACILLINASE, INHIBITOR, COMPLEX, OXA, ANTIBIOTIC RESISTANCE, BETA- KEYWDS 2 LACTAMASE, FRAGMENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.A.LUND,H.K.S.LEIROS REVDAT 5 15-NOV-23 5QAX 1 REMARK REVDAT 4 17-NOV-21 5QAX 1 REMARK REVDAT 3 14-MAR-18 5QAX 1 JRNL REVDAT 2 21-FEB-18 5QAX 1 REMARK REVDAT 1 10-JAN-18 5QAX 0 JRNL AUTH S.AKHTER,B.A.LUND,A.ISMAEL,M.LANGER,J.ISAKSSON, JRNL AUTH 2 T.CHRISTOPEIT,H.S.LEIROS,A.BAYER JRNL TITL A FOCUSED FRAGMENT LIBRARY TARGETING THE ANTIBIOTIC JRNL TITL 2 RESISTANCE ENZYME - OXACILLINASE-48: SYNTHESIS, STRUCTURAL JRNL TITL 3 EVALUATION AND INHIBITOR DESIGN. JRNL REF EUR J MED CHEM V. 145 634 2018 JRNL REFN ISSN 1768-3254 JRNL PMID 29348071 JRNL DOI 10.1016/J.EJMECH.2017.12.085 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 48233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1759 - 5.9410 0.99 2775 143 0.1608 0.1818 REMARK 3 2 5.9410 - 4.7172 0.98 2731 152 0.1479 0.1684 REMARK 3 3 4.7172 - 4.1214 0.98 2703 147 0.1354 0.1762 REMARK 3 4 4.1214 - 3.7448 0.97 2654 147 0.1542 0.1921 REMARK 3 5 3.7448 - 3.4765 0.97 2682 128 0.1662 0.2207 REMARK 3 6 3.4765 - 3.2715 0.99 2713 157 0.1719 0.1920 REMARK 3 7 3.2715 - 3.1077 0.99 2727 145 0.1999 0.2288 REMARK 3 8 3.1077 - 2.9725 1.00 2759 133 0.1897 0.2289 REMARK 3 9 2.9725 - 2.8581 1.00 2744 123 0.1798 0.2130 REMARK 3 10 2.8581 - 2.7595 1.00 2735 143 0.1826 0.2276 REMARK 3 11 2.7595 - 2.6732 1.00 2755 123 0.1901 0.2168 REMARK 3 12 2.6732 - 2.5968 1.00 2763 135 0.2000 0.2719 REMARK 3 13 2.5968 - 2.5284 1.00 2770 144 0.1940 0.2557 REMARK 3 14 2.5284 - 2.4668 1.00 2716 133 0.2106 0.2691 REMARK 3 15 2.4668 - 2.4107 1.00 2749 152 0.2115 0.2736 REMARK 3 16 2.4107 - 2.3594 1.00 2729 154 0.2196 0.2372 REMARK 3 17 2.3594 - 2.3122 0.79 2159 111 0.2366 0.3032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 8264 REMARK 3 ANGLE : 0.596 11185 REMARK 3 CHIRALITY : 0.044 1161 REMARK 3 PLANARITY : 0.003 1522 REMARK 3 DIHEDRAL : 18.553 4892 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 24 THROUGH 265) REMARK 3 ORIGIN FOR THE GROUP (A): 136.8543-109.3174 20.9943 REMARK 3 T TENSOR REMARK 3 T11: 0.2850 T22: 0.3017 REMARK 3 T33: 0.1985 T12: -0.0542 REMARK 3 T13: 0.0104 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.0248 L22: 1.4739 REMARK 3 L33: 0.5243 L12: 0.2769 REMARK 3 L13: 0.2356 L23: -0.2020 REMARK 3 S TENSOR REMARK 3 S11: 0.0800 S12: -0.1603 S13: -0.0895 REMARK 3 S21: 0.0726 S22: -0.0662 S23: 0.0864 REMARK 3 S31: 0.0932 S32: -0.0762 S33: -0.0306 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 24 THROUGH 265) REMARK 3 ORIGIN FOR THE GROUP (A): 165.3176 -93.4884 22.1590 REMARK 3 T TENSOR REMARK 3 T11: 0.2335 T22: 0.2805 REMARK 3 T33: 0.3133 T12: -0.0353 REMARK 3 T13: 0.0023 T23: -0.0584 REMARK 3 L TENSOR REMARK 3 L11: 2.2867 L22: 1.4102 REMARK 3 L33: 0.8813 L12: 0.3093 REMARK 3 L13: 0.5590 L23: 0.0307 REMARK 3 S TENSOR REMARK 3 S11: -0.0379 S12: -0.1809 S13: 0.2459 REMARK 3 S21: 0.0462 S22: 0.0372 S23: -0.1881 REMARK 3 S31: -0.0652 S32: 0.0294 S33: -0.0181 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 24 THROUGH 265) REMARK 3 ORIGIN FOR THE GROUP (A): 139.3043-116.7422 -18.9677 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.2505 REMARK 3 T33: 0.3807 T12: 0.0399 REMARK 3 T13: -0.0247 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.3213 L22: 2.5603 REMARK 3 L33: 0.9582 L12: -0.7780 REMARK 3 L13: 0.5495 L23: -0.3021 REMARK 3 S TENSOR REMARK 3 S11: 0.1612 S12: -0.0860 S13: -0.6751 REMARK 3 S21: -0.0759 S22: 0.0418 S23: 0.1783 REMARK 3 S31: 0.1771 S32: -0.0555 S33: -0.1443 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 24 THROUGH 265) REMARK 3 ORIGIN FOR THE GROUP (A): 139.3409 -84.1907 -17.7464 REMARK 3 T TENSOR REMARK 3 T11: 0.2955 T22: 0.2390 REMARK 3 T33: 0.2949 T12: 0.0508 REMARK 3 T13: -0.0348 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.5413 L22: 2.4460 REMARK 3 L33: 1.5447 L12: -0.4507 REMARK 3 L13: 0.4346 L23: -0.0143 REMARK 3 S TENSOR REMARK 3 S11: -0.1882 S12: -0.0908 S13: 0.3227 REMARK 3 S21: 0.1114 S22: 0.0102 S23: -0.3180 REMARK 3 S31: -0.2430 S32: -0.0091 S33: 0.1315 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 SELECTION : (CHAIN B AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 ATOM PAIRS NUMBER : 6168 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 SELECTION : (CHAIN C AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 ATOM PAIRS NUMBER : 6168 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 SELECTION : (CHAIN D AND (RESID 24 THROUGH 114 OR REMARK 3 RESID 116 THROUGH 117 OR RESID 119 REMARK 3 THROUGH 265)) REMARK 3 ATOM PAIRS NUMBER : 6168 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5QAX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1001401718. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 44.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.11470 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.52450 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY: 5DTK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 8-11% PEG 8000 AND REMARK 280 4-8% 1-BUTANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.92400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 23 REMARK 465 LYS B 23 REMARK 465 LYS C 23 REMARK 465 LYS D 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C TYR D 117 H SER D 118 1.34 REMARK 500 C TYR D 117 H SER D 118 1.34 REMARK 500 O HOH C 455 O HOH C 482 1.95 REMARK 500 O HOH A 500 O HOH B 485 2.00 REMARK 500 O HOH A 468 O HOH A 479 2.01 REMARK 500 O HOH C 465 O HOH D 475 2.04 REMARK 500 O HOH C 490 O HOH D 461 2.08 REMARK 500 O HOH B 411 O HOH B 490 2.12 REMARK 500 O HOH C 478 O HOH C 488 2.15 REMARK 500 O ALA D 141 O HOH D 401 2.17 REMARK 500 NZ LYS B 39 O HOH B 401 2.18 REMARK 500 OE1 GLU D 256 O HOH D 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 69 -137.45 55.58 REMARK 500 SER A 155 8.95 -152.22 REMARK 500 ASP A 159 16.36 -146.64 REMARK 500 ALA B 69 -136.92 55.98 REMARK 500 ASN B 106 59.58 -93.33 REMARK 500 SER B 155 9.70 -156.41 REMARK 500 ASP B 159 18.44 -147.04 REMARK 500 ALA C 69 -136.19 54.65 REMARK 500 TYR C 117 48.51 -100.04 REMARK 500 SER C 118 81.98 -9.83 REMARK 500 SER C 155 7.32 -153.46 REMARK 500 ASP C 159 17.61 -146.02 REMARK 500 ALA D 69 -134.73 54.40 REMARK 500 SER D 118 58.34 38.51 REMARK 500 SER D 155 7.56 -153.48 REMARK 500 ASP D 159 18.61 -145.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q92 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q92 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q92 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q92 D 301 DBREF 5QAX A 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 DBREF 5QAX B 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 DBREF 5QAX C 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 DBREF 5QAX D 23 265 UNP Q6XEC0 Q6XEC0_KLEPN 23 265 SEQRES 1 A 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 A 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 A 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 A 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 A 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 A 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 A 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 A 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 A 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 A 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 A 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 A 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 A 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 A 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 A 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 A 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 A 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 A 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 A 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO SEQRES 1 B 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 B 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 B 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 B 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 B 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 B 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 B 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 B 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 B 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 B 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 B 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 B 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 B 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 B 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 B 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 B 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 B 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 B 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 B 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO SEQRES 1 C 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 C 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 C 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 C 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 C 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 C 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 C 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 C 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 C 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 C 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 C 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 C 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 C 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 C 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 C 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 C 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 C 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 C 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 C 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO SEQRES 1 D 243 LYS GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE SEQRES 2 D 243 THR GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN SEQRES 3 D 243 GLU ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG SEQRES 4 D 243 ALA ASN GLN ALA PHE LEU PRO ALA SER THR PHE KCX ILE SEQRES 5 D 243 PRO ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS SEQRES 6 D 243 ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG SEQRES 7 D 243 ASP ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR SEQRES 8 D 243 ALA MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE SEQRES 9 D 243 ALA ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU SEQRES 10 D 243 HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN SEQRES 11 D 243 VAL ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER SEQRES 12 D 243 ALA THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS SEQRES 13 D 243 ASN LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL SEQRES 14 D 243 LYS GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE SEQRES 15 D 243 ILE ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO SEQRES 16 D 243 LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP SEQRES 17 D 243 ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SEQRES 18 D 243 SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU SEQRES 19 D 243 VAL LEU LYS GLN GLU LYS ILE ILE PRO MODRES 5QAX KCX A 73 LYS MODIFIED RESIDUE MODRES 5QAX KCX B 73 LYS MODIFIED RESIDUE MODRES 5QAX KCX C 73 LYS MODIFIED RESIDUE MODRES 5QAX KCX D 73 LYS MODIFIED RESIDUE HET KCX A 73 12 HET KCX B 73 12 HET KCX C 73 12 HET KCX D 73 12 HET Q92 A 301 29 HET CL A 302 1 HET EDO A 303 10 HET EDO A 304 10 HET Q92 B 301 29 HET Q92 C 301 29 HET CL C 302 1 HET EDO C 303 10 HET Q92 D 301 29 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM Q92 3-QUINOLIN-6-YLBENZOIC ACID HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 KCX 4(C7 H14 N2 O4) FORMUL 5 Q92 4(C16 H11 N O2) FORMUL 6 CL 2(CL 1-) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 14 HOH *396(H2 O) HELIX 1 AA1 TRP A 31 GLU A 37 1 7 HELIX 2 AA2 ASN A 58 ASN A 63 1 6 HELIX 3 AA3 PRO A 68 THR A 71 5 4 HELIX 4 AA4 PHE A 72 LEU A 83 1 12 HELIX 5 AA5 ILE A 102 ASN A 106 5 5 HELIX 6 AA6 ASN A 110 TYR A 117 1 8 HELIX 7 AA7 VAL A 119 GLY A 131 1 13 HELIX 8 AA8 GLY A 131 ASP A 143 1 13 HELIX 9 AA9 SER A 155 GLY A 160 1 6 HELIX 10 AB1 SER A 165 HIS A 178 1 14 HELIX 11 AB2 SER A 184 MET A 195 1 12 HELIX 12 AB3 THR A 243 LEU A 247 5 5 HELIX 13 AB4 GLY A 248 GLU A 261 1 14 HELIX 14 AB5 TRP B 31 GLU B 37 1 7 HELIX 15 AB6 ASN B 58 ASN B 63 1 6 HELIX 16 AB7 PRO B 68 THR B 71 5 4 HELIX 17 AB8 PHE B 72 LEU B 83 1 12 HELIX 18 AB9 ILE B 102 ASN B 106 5 5 HELIX 19 AC1 ASN B 110 TYR B 117 1 8 HELIX 20 AC2 VAL B 119 GLY B 131 1 13 HELIX 21 AC3 GLY B 131 PHE B 142 1 12 HELIX 22 AC4 SER B 155 GLY B 160 1 6 HELIX 23 AC5 SER B 165 HIS B 178 1 14 HELIX 24 AC6 SER B 184 MET B 195 1 12 HELIX 25 AC7 THR B 243 LEU B 247 5 5 HELIX 26 AC8 GLY B 248 GLU B 261 1 14 HELIX 27 AC9 TRP C 31 GLU C 37 1 7 HELIX 28 AD1 ASN C 58 ASN C 63 1 6 HELIX 29 AD2 PRO C 68 THR C 71 5 4 HELIX 30 AD3 PHE C 72 LEU C 83 1 12 HELIX 31 AD4 ILE C 102 ASN C 106 5 5 HELIX 32 AD5 ASN C 110 TYR C 117 1 8 HELIX 33 AD6 VAL C 119 GLY C 131 1 13 HELIX 34 AD7 GLY C 131 PHE C 142 1 12 HELIX 35 AD8 SER C 155 GLY C 160 1 6 HELIX 36 AD9 ALA C 166 HIS C 178 1 13 HELIX 37 AE1 SER C 184 MET C 195 1 12 HELIX 38 AE2 THR C 243 LEU C 247 5 5 HELIX 39 AE3 GLY C 248 GLU C 261 1 14 HELIX 40 AE4 TRP D 31 GLU D 37 1 7 HELIX 41 AE5 ASN D 58 ASN D 63 1 6 HELIX 42 AE6 PRO D 68 THR D 71 5 4 HELIX 43 AE7 PHE D 72 LEU D 83 1 12 HELIX 44 AE8 ILE D 102 ASN D 106 5 5 HELIX 45 AE9 ASN D 110 TYR D 117 1 8 HELIX 46 AF1 VAL D 119 GLY D 131 1 13 HELIX 47 AF2 GLY D 131 PHE D 142 1 12 HELIX 48 AF3 SER D 155 GLY D 160 1 6 HELIX 49 AF4 ALA D 166 HIS D 178 1 13 HELIX 50 AF5 SER D 184 MET D 195 1 12 HELIX 51 AF6 THR D 243 LEU D 247 5 5 HELIX 52 AF7 GLY D 248 GLU D 261 1 14 SHEET 1 AA1 7 TRP A 25 GLU A 27 0 SHEET 2 AA1 7 GLN A 53 THR A 56 1 O GLY A 54 N GLN A 26 SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N LEU A 46 O PHE A 55 SHEET 4 AA1 7 VAL A 232 ASP A 240 -1 O ASN A 238 N VAL A 43 SHEET 5 AA1 7 ILE A 219 GLU A 227 -1 N VAL A 226 O TRP A 233 SHEET 6 AA1 7 ILE A 204 SER A 212 -1 N GLY A 210 O TRP A 221 SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205 SHEET 1 AA2 7 TRP B 25 GLU B 27 0 SHEET 2 AA2 7 GLN B 53 THR B 56 1 O GLY B 54 N GLN B 26 SHEET 3 AA2 7 GLY B 42 ASN B 48 -1 N LEU B 46 O PHE B 55 SHEET 4 AA2 7 VAL B 232 ASP B 240 -1 O ASN B 238 N VAL B 43 SHEET 5 AA2 7 ILE B 219 GLU B 227 -1 N VAL B 226 O TRP B 233 SHEET 6 AA2 7 ILE B 204 SER B 212 -1 N ILE B 204 O GLU B 227 SHEET 7 AA2 7 LEU B 196 ALA B 199 -1 N GLU B 198 O ILE B 205 SHEET 1 AA3 7 TRP C 25 GLU C 27 0 SHEET 2 AA3 7 GLN C 53 THR C 56 1 O THR C 56 N GLN C 26 SHEET 3 AA3 7 GLY C 42 ASN C 48 -1 N LEU C 46 O PHE C 55 SHEET 4 AA3 7 ASN C 231 ASP C 240 -1 O ASN C 238 N VAL C 43 SHEET 5 AA3 7 ILE C 219 LEU C 228 -1 N VAL C 226 O TRP C 233 SHEET 6 AA3 7 ILE C 204 SER C 212 -1 N ILE C 204 O GLU C 227 SHEET 7 AA3 7 LEU C 196 ALA C 199 -1 N GLU C 198 O ILE C 205 SHEET 1 AA4 2 ALA C 65 PHE C 66 0 SHEET 2 AA4 2 ILE C 164 SER C 165 -1 O ILE C 164 N PHE C 66 SHEET 1 AA5 7 TRP D 25 GLU D 27 0 SHEET 2 AA5 7 GLN D 53 THR D 56 1 O THR D 56 N GLN D 26 SHEET 3 AA5 7 GLY D 42 ASN D 48 -1 N ASN D 48 O GLN D 53 SHEET 4 AA5 7 ASN D 231 ASP D 240 -1 O ASN D 238 N VAL D 43 SHEET 5 AA5 7 ILE D 219 LEU D 228 -1 N VAL D 226 O TRP D 233 SHEET 6 AA5 7 ILE D 204 SER D 212 -1 N ILE D 204 O GLU D 227 SHEET 7 AA5 7 LEU D 196 ALA D 199 -1 N GLU D 198 O ILE D 205 SHEET 1 AA6 2 ALA D 65 PHE D 66 0 SHEET 2 AA6 2 ILE D 164 SER D 165 -1 O ILE D 164 N PHE D 66 LINK C PHE A 72 N KCX A 73 1555 1555 1.33 LINK C KCX A 73 N ILE A 74 1555 1555 1.33 LINK C PHE B 72 N KCX B 73 1555 1555 1.33 LINK C KCX B 73 N ILE B 74 1555 1555 1.33 LINK C PHE C 72 N KCX C 73 1555 1555 1.33 LINK C KCX C 73 N ILE C 74 1555 1555 1.33 LINK C PHE D 72 N KCX D 73 1555 1555 1.33 LINK C KCX D 73 N ILE D 74 1555 1555 1.33 CISPEP 1 GLU A 216 PRO A 217 0 -3.29 CISPEP 2 GLU B 216 PRO B 217 0 -2.49 CISPEP 3 GLU C 216 PRO C 217 0 -2.53 CISPEP 4 GLU D 216 PRO D 217 0 -1.54 SITE 1 AC1 8 SER A 70 SER A 118 THR A 209 GLY A 210 SITE 2 AC1 8 TYR A 211 SER A 244 LEU A 247 ARG A 250 SITE 1 AC2 2 ARG A 206 ARG B 206 SITE 1 AC3 4 ILE A 112 LYS A 116 LEU B 228 ASP B 229 SITE 1 AC4 5 TYR A 177 GLU A 227 HOH A 404 HIS B 90 SITE 2 AC4 5 HOH B 427 SITE 1 AC5 9 SER B 70 ILE B 102 SER B 118 THR B 209 SITE 2 AC5 9 GLY B 210 TYR B 211 SER B 244 LEU B 247 SITE 3 AC5 9 ARG B 250 SITE 1 AC6 6 SER C 70 SER C 118 THR C 209 GLY C 210 SITE 2 AC6 6 TYR C 211 ARG C 250 SITE 1 AC7 2 ARG C 206 ARG D 206 SITE 1 AC8 4 ASN C 200 ASP C 229 HOH C 437 LYS D 116 SITE 1 AC9 7 SER D 70 SER D 118 THR D 209 GLY D 210 SITE 2 AC9 7 TYR D 211 SER D 244 ARG D 250 CRYST1 64.196 107.848 85.150 90.00 103.82 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015577 0.000000 0.003833 0.00000 SCALE2 0.000000 0.009272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012094 0.00000