data_5QC5 # _entry.id 5QC5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.352 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5QC5 pdb_00005qc5 10.2210/pdb5qc5/pdb WWPDB D_1001401762 ? ? # _pdbx_database_status.entry_id 5QC5 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2017-08-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bembenek, S.D.' 1 ? 'Ameriks, M.K.' 2 ? 'Mirzadegan, T.' 3 ? 'Yang, H.' 4 ? 'Shao, C.' 5 0000-0001-6817-7476 'Burley, S.K.' 6 0000-0002-2487-9713 # _citation.id primary _citation.journal_abbrev 'To be published' _citation.title 'Crystal structure of human Cathepsin-S with bound ligand' _citation.year ? _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bembenek, S.D.' 1 ? primary 'Ameriks, M.K.' 2 ? primary 'Mirzadegan, T.' 3 ? primary 'Yang, H.' 4 ? primary 'Shao, C.' 5 0000-0001-6817-7476 primary 'Burley, S.K.' 6 0000-0002-2487-9713 # _cell.entry_id 5QC5 _cell.length_a 113.030 _cell.length_b 37.000 _cell.length_c 105.170 _cell.angle_alpha 90.00 _cell.angle_beta 107.94 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QC5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cathepsin S' 24516.471 2 3.4.22.27 C139S ? ? 2 non-polymer syn ;1-[5-{1-[3-(4-tert-butylpiperidin-1-yl)propyl]-5-(methylsulfonyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}-2-(trifluoromethyl)phenyl]-N-[(4-fluorophenyl)methyl]methanamine ; 663.812 2 ? ? ? ? 3 water nat water 18.015 219 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ILPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII DNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEILQGGG ; _entity_poly.pdbx_seq_one_letter_code_can ;ILPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII DNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEILQGGG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 LEU n 1 3 PRO n 1 4 ASP n 1 5 SER n 1 6 VAL n 1 7 ASP n 1 8 TRP n 1 9 ARG n 1 10 GLU n 1 11 LYS n 1 12 GLY n 1 13 CYS n 1 14 VAL n 1 15 THR n 1 16 GLU n 1 17 VAL n 1 18 LYS n 1 19 TYR n 1 20 GLN n 1 21 GLY n 1 22 SER n 1 23 CYS n 1 24 GLY n 1 25 ALA n 1 26 SER n 1 27 TRP n 1 28 ALA n 1 29 PHE n 1 30 SER n 1 31 ALA n 1 32 VAL n 1 33 GLY n 1 34 ALA n 1 35 LEU n 1 36 GLU n 1 37 ALA n 1 38 GLN n 1 39 LEU n 1 40 LYS n 1 41 LEU n 1 42 LYS n 1 43 THR n 1 44 GLY n 1 45 LYS n 1 46 LEU n 1 47 VAL n 1 48 SER n 1 49 LEU n 1 50 SER n 1 51 ALA n 1 52 GLN n 1 53 ASN n 1 54 LEU n 1 55 VAL n 1 56 ASP n 1 57 CYS n 1 58 SER n 1 59 THR n 1 60 GLU n 1 61 LYS n 1 62 TYR n 1 63 GLY n 1 64 ASN n 1 65 LYS n 1 66 GLY n 1 67 CYS n 1 68 ASN n 1 69 GLY n 1 70 GLY n 1 71 PHE n 1 72 MET n 1 73 THR n 1 74 THR n 1 75 ALA n 1 76 PHE n 1 77 GLN n 1 78 TYR n 1 79 ILE n 1 80 ILE n 1 81 ASP n 1 82 ASN n 1 83 LYS n 1 84 GLY n 1 85 ILE n 1 86 ASP n 1 87 SER n 1 88 ASP n 1 89 ALA n 1 90 SER n 1 91 TYR n 1 92 PRO n 1 93 TYR n 1 94 LYS n 1 95 ALA n 1 96 MET n 1 97 ASP n 1 98 GLN n 1 99 LYS n 1 100 CYS n 1 101 GLN n 1 102 TYR n 1 103 ASP n 1 104 SER n 1 105 LYS n 1 106 TYR n 1 107 ARG n 1 108 ALA n 1 109 ALA n 1 110 THR n 1 111 CYS n 1 112 SER n 1 113 LYS n 1 114 TYR n 1 115 THR n 1 116 GLU n 1 117 LEU n 1 118 PRO n 1 119 TYR n 1 120 GLY n 1 121 ARG n 1 122 GLU n 1 123 ASP n 1 124 VAL n 1 125 LEU n 1 126 LYS n 1 127 GLU n 1 128 ALA n 1 129 VAL n 1 130 ALA n 1 131 ASN n 1 132 LYS n 1 133 GLY n 1 134 PRO n 1 135 VAL n 1 136 SER n 1 137 VAL n 1 138 GLY n 1 139 VAL n 1 140 ASP n 1 141 ALA n 1 142 ARG n 1 143 HIS n 1 144 PRO n 1 145 SER n 1 146 PHE n 1 147 PHE n 1 148 LEU n 1 149 TYR n 1 150 ARG n 1 151 SER n 1 152 GLY n 1 153 VAL n 1 154 TYR n 1 155 TYR n 1 156 GLU n 1 157 PRO n 1 158 SER n 1 159 CYS n 1 160 THR n 1 161 GLN n 1 162 ASN n 1 163 VAL n 1 164 ASN n 1 165 HIS n 1 166 GLY n 1 167 VAL n 1 168 LEU n 1 169 VAL n 1 170 VAL n 1 171 GLY n 1 172 TYR n 1 173 GLY n 1 174 ASP n 1 175 LEU n 1 176 ASN n 1 177 GLY n 1 178 LYS n 1 179 GLU n 1 180 TYR n 1 181 TRP n 1 182 LEU n 1 183 VAL n 1 184 LYS n 1 185 ASN n 1 186 SER n 1 187 TRP n 1 188 GLY n 1 189 HIS n 1 190 ASN n 1 191 PHE n 1 192 GLY n 1 193 GLU n 1 194 GLU n 1 195 GLY n 1 196 TYR n 1 197 ILE n 1 198 ARG n 1 199 MET n 1 200 ALA n 1 201 ARG n 1 202 ASN n 1 203 LYS n 1 204 GLY n 1 205 ASN n 1 206 HIS n 1 207 CYS n 1 208 GLY n 1 209 ILE n 1 210 ALA n 1 211 SER n 1 212 PHE n 1 213 PRO n 1 214 SER n 1 215 TYR n 1 216 PRO n 1 217 GLU n 1 218 ILE n 1 219 LEU n 1 220 GLN n 1 221 GLY n 1 222 GLY n 1 223 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 223 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTSS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CATS_HUMAN _struct_ref.pdbx_db_accession P25774 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYII DNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI ; _struct_ref.pdbx_align_begin 114 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5QC5 A 1 ? 218 ? P25774 114 ? 331 ? 0 217 2 1 5QC5 B 1 ? 218 ? P25774 114 ? 331 ? 0 217 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5QC5 SER A 26 ? UNP P25774 CYS 139 'engineered mutation' 25 1 1 5QC5 LEU A 219 ? UNP P25774 ? ? 'expression tag' 218 2 1 5QC5 GLN A 220 ? UNP P25774 ? ? 'expression tag' 219 3 1 5QC5 GLY A 221 ? UNP P25774 ? ? 'expression tag' 220 4 1 5QC5 GLY A 222 ? UNP P25774 ? ? 'expression tag' 221 5 1 5QC5 GLY A 223 ? UNP P25774 ? ? 'expression tag' 222 6 2 5QC5 SER B 26 ? UNP P25774 CYS 139 'engineered mutation' 25 7 2 5QC5 LEU B 219 ? UNP P25774 ? ? 'expression tag' 218 8 2 5QC5 GLN B 220 ? UNP P25774 ? ? 'expression tag' 219 9 2 5QC5 GLY B 221 ? UNP P25774 ? ? 'expression tag' 220 10 2 5QC5 GLY B 222 ? UNP P25774 ? ? 'expression tag' 221 11 2 5QC5 GLY B 223 ? UNP P25774 ? ? 'expression tag' 222 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BAJ non-polymer . ;1-[5-{1-[3-(4-tert-butylpiperidin-1-yl)propyl]-5-(methylsulfonyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}-2-(trifluoromethyl)phenyl]-N-[(4-fluorophenyl)methyl]methanamine ; ? 'C34 H45 F4 N5 O2 S' 663.812 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 5QC5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.87 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.50 _exptl_crystal_grow.pdbx_details ;100MM SODIUM ACETATE PH 4.5, 200MM AMMONIUM ACETATE, 25% PEG 8000. PROTEIN CONCENTRATION 7 MG/ML, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2006-05-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5QC5 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.233 _reflns.d_resolution_high 2.400 _reflns.number_obs 16512 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5QC5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16512 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.460 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.23 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.256 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.020 _refine.ls_number_reflns_R_free 829 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.340 _refine.pdbx_overall_phase_error 26.010 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3400 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 92 _refine_hist.number_atoms_solvent 219 _refine_hist.number_atoms_total 3711 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 28.23 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 3590 'X-RAY DIFFRACTION' ? f_angle_d 1.111 ? ? 4877 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.415 ? ? 2079 'X-RAY DIFFRACTION' ? f_chiral_restr 0.061 ? ? 485 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 622 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.4001 2.5504 2561 0.2439 99.00 0.3349 . . 147 . . 'X-RAY DIFFRACTION' . 2.5504 2.7471 2570 0.2429 100.00 0.3939 . . 144 . . 'X-RAY DIFFRACTION' . 2.7471 3.0233 2595 0.2246 99.00 0.3135 . . 133 . . 'X-RAY DIFFRACTION' . 3.0233 3.4601 2633 0.1879 100.00 0.2812 . . 122 . . 'X-RAY DIFFRACTION' . 3.4601 4.3568 2624 0.1525 99.00 0.2269 . . 127 . . 'X-RAY DIFFRACTION' . 4.3568 28.2353 2700 0.1404 100.00 0.1860 . . 156 . . # _struct.entry_id 5QC5 _struct.title 'Crystal structure of human Cathepsin-S with bound ligand' _struct.pdbx_model_details 'Structures re-refined for D3R docking challenge' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5QC5 _struct_keywords.text 'D3R, Cathepsin S, Ligand Docking, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 9 ? GLY A 12 ? ARG A 8 GLY A 11 5 ? 4 HELX_P HELX_P2 AA2 ALA A 25 ? GLY A 44 ? ALA A 24 GLY A 43 1 ? 20 HELX_P HELX_P3 AA3 SER A 50 ? SER A 58 ? SER A 49 SER A 57 1 ? 9 HELX_P HELX_P4 AA4 THR A 59 ? GLY A 63 ? THR A 58 GLY A 62 5 ? 5 HELX_P HELX_P5 AA5 LYS A 65 ? GLY A 69 ? LYS A 64 GLY A 68 5 ? 5 HELX_P HELX_P6 AA6 PHE A 71 ? LYS A 83 ? PHE A 70 LYS A 82 1 ? 13 HELX_P HELX_P7 AA7 ASP A 103 ? LYS A 105 ? ASP A 102 LYS A 104 5 ? 3 HELX_P HELX_P8 AA8 ARG A 121 ? LYS A 132 ? ARG A 120 LYS A 131 1 ? 12 HELX_P HELX_P9 AA9 HIS A 143 ? LEU A 148 ? HIS A 142 LEU A 147 1 ? 6 HELX_P HELX_P10 AB1 ASN A 205 ? ILE A 209 ? ASN A 204 ILE A 208 5 ? 5 HELX_P HELX_P11 AB2 ARG B 9 ? GLY B 12 ? ARG B 8 GLY B 11 5 ? 4 HELX_P HELX_P12 AB3 ALA B 25 ? GLY B 44 ? ALA B 24 GLY B 43 1 ? 20 HELX_P HELX_P13 AB4 SER B 50 ? SER B 58 ? SER B 49 SER B 57 1 ? 9 HELX_P HELX_P14 AB5 THR B 59 ? GLY B 63 ? THR B 58 GLY B 62 5 ? 5 HELX_P HELX_P15 AB6 LYS B 65 ? GLY B 69 ? LYS B 64 GLY B 68 5 ? 5 HELX_P HELX_P16 AB7 PHE B 71 ? LYS B 83 ? PHE B 70 LYS B 82 1 ? 13 HELX_P HELX_P17 AB8 ASP B 103 ? LYS B 105 ? ASP B 102 LYS B 104 5 ? 3 HELX_P HELX_P18 AB9 ARG B 121 ? LYS B 132 ? ARG B 120 LYS B 131 1 ? 12 HELX_P HELX_P19 AC1 HIS B 143 ? LEU B 148 ? HIS B 142 LEU B 147 1 ? 6 HELX_P HELX_P20 AC2 ASN B 205 ? ILE B 209 ? ASN B 204 ILE B 208 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 67 SG ? ? A CYS 22 A CYS 66 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf2 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 56 A CYS 99 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 159 SG ? ? ? 1_555 A CYS 207 SG ? ? A CYS 158 A CYS 206 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 67 SG ? ? B CYS 22 B CYS 66 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf5 disulf ? ? B CYS 57 SG ? ? ? 1_555 B CYS 100 SG ? ? B CYS 56 B CYS 99 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf6 disulf ? ? B CYS 159 SG ? ? ? 1_555 B CYS 207 SG ? ? B CYS 158 B CYS 206 1_555 ? ? ? ? ? ? ? 2.017 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 3 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 6 ? ASP A 7 ? VAL A 5 ASP A 6 AA1 2 HIS A 165 ? LEU A 175 ? HIS A 164 LEU A 174 AA1 3 VAL A 135 ? VAL A 139 ? VAL A 134 VAL A 138 AA2 1 VAL A 6 ? ASP A 7 ? VAL A 5 ASP A 6 AA2 2 HIS A 165 ? LEU A 175 ? HIS A 164 LEU A 174 AA2 3 LYS A 178 ? LYS A 184 ? LYS A 177 LYS A 183 AA2 4 TYR A 196 ? ALA A 200 ? TYR A 195 ALA A 199 AA2 5 VAL A 153 ? TYR A 154 ? VAL A 152 TYR A 153 AA3 1 ILE A 85 ? ASP A 86 ? ILE A 84 ASP A 85 AA3 2 ARG A 107 ? ALA A 109 ? ARG A 106 ALA A 108 AA4 1 LYS A 113 ? GLU A 116 ? LYS A 112 GLU A 115 AA4 2 SER A 214 ? GLU A 217 ? SER A 213 GLU A 216 AA5 1 VAL B 6 ? ASP B 7 ? VAL B 5 ASP B 6 AA5 2 HIS B 165 ? LEU B 175 ? HIS B 164 LEU B 174 AA5 3 VAL B 135 ? VAL B 139 ? VAL B 134 VAL B 138 AA6 1 VAL B 6 ? ASP B 7 ? VAL B 5 ASP B 6 AA6 2 HIS B 165 ? LEU B 175 ? HIS B 164 LEU B 174 AA6 3 LYS B 178 ? LYS B 184 ? LYS B 177 LYS B 183 AA6 4 TYR B 196 ? ALA B 200 ? TYR B 195 ALA B 199 AA6 5 VAL B 153 ? TYR B 154 ? VAL B 152 TYR B 153 AA7 1 ILE B 85 ? ASP B 86 ? ILE B 84 ASP B 85 AA7 2 ARG B 107 ? ALA B 109 ? ARG B 106 ALA B 108 AA8 1 LYS B 113 ? GLU B 116 ? LYS B 112 GLU B 115 AA8 2 SER B 214 ? GLU B 217 ? SER B 213 GLU B 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 6 ? N VAL A 5 O TYR A 172 ? O TYR A 171 AA1 2 3 O VAL A 167 ? O VAL A 166 N VAL A 137 ? N VAL A 136 AA2 1 2 N VAL A 6 ? N VAL A 5 O TYR A 172 ? O TYR A 171 AA2 2 3 N LEU A 168 ? N LEU A 167 O LYS A 184 ? O LYS A 183 AA2 3 4 N TRP A 181 ? N TRP A 180 O MET A 199 ? O MET A 198 AA2 4 5 O ARG A 198 ? O ARG A 197 N TYR A 154 ? N TYR A 153 AA3 1 2 N ILE A 85 ? N ILE A 84 O ALA A 108 ? O ALA A 107 AA4 1 2 N LYS A 113 ? N LYS A 112 O GLU A 217 ? O GLU A 216 AA5 1 2 N VAL B 6 ? N VAL B 5 O TYR B 172 ? O TYR B 171 AA5 2 3 O VAL B 167 ? O VAL B 166 N VAL B 137 ? N VAL B 136 AA6 1 2 N VAL B 6 ? N VAL B 5 O TYR B 172 ? O TYR B 171 AA6 2 3 N LEU B 168 ? N LEU B 167 O LYS B 184 ? O LYS B 183 AA6 3 4 N VAL B 183 ? N VAL B 182 O ILE B 197 ? O ILE B 196 AA6 4 5 O ARG B 198 ? O ARG B 197 N TYR B 154 ? N TYR B 153 AA7 1 2 N ILE B 85 ? N ILE B 84 O ALA B 108 ? O ALA B 107 AA8 1 2 N LYS B 113 ? N LYS B 112 O GLU B 217 ? O GLU B 216 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BAJ 901 ? 18 'binding site for residue BAJ A 901' AC2 Software B BAJ 901 ? 20 'binding site for residue BAJ B 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 TRP A 27 ? TRP A 26 . ? 1_555 ? 2 AC1 18 GLY A 63 ? GLY A 62 . ? 1_555 ? 3 AC1 18 LYS A 65 ? LYS A 64 . ? 1_555 ? 4 AC1 18 ASN A 68 ? ASN A 67 . ? 1_555 ? 5 AC1 18 GLY A 69 ? GLY A 68 . ? 1_555 ? 6 AC1 18 GLY A 70 ? GLY A 69 . ? 1_555 ? 7 AC1 18 PHE A 71 ? PHE A 70 . ? 1_555 ? 8 AC1 18 MET A 72 ? MET A 71 . ? 1_555 ? 9 AC1 18 TYR A 119 ? TYR A 118 . ? 2_656 ? 10 AC1 18 ASN A 162 ? ASN A 161 . ? 1_555 ? 11 AC1 18 VAL A 163 ? VAL A 162 . ? 1_555 ? 12 AC1 18 ASN A 164 ? ASN A 163 . ? 1_555 ? 13 AC1 18 HIS A 165 ? HIS A 164 . ? 1_555 ? 14 AC1 18 GLY A 166 ? GLY A 165 . ? 1_555 ? 15 AC1 18 PHE A 212 ? PHE A 211 . ? 1_555 ? 16 AC1 18 HOH E . ? HOH A 1006 . ? 1_555 ? 17 AC1 18 HOH E . ? HOH A 1007 . ? 1_555 ? 18 AC1 18 HOH E . ? HOH A 1032 . ? 1_555 ? 19 AC2 20 TRP B 27 ? TRP B 26 . ? 1_555 ? 20 AC2 20 GLY B 63 ? GLY B 62 . ? 1_555 ? 21 AC2 20 LYS B 65 ? LYS B 64 . ? 1_555 ? 22 AC2 20 ASN B 68 ? ASN B 67 . ? 1_555 ? 23 AC2 20 GLY B 69 ? GLY B 68 . ? 1_555 ? 24 AC2 20 GLY B 70 ? GLY B 69 . ? 1_555 ? 25 AC2 20 PHE B 71 ? PHE B 70 . ? 1_555 ? 26 AC2 20 MET B 72 ? MET B 71 . ? 1_555 ? 27 AC2 20 TYR B 119 ? TYR B 118 . ? 2_555 ? 28 AC2 20 GLY B 138 ? GLY B 137 . ? 1_555 ? 29 AC2 20 ASN B 162 ? ASN B 161 . ? 1_555 ? 30 AC2 20 VAL B 163 ? VAL B 162 . ? 1_555 ? 31 AC2 20 ASN B 164 ? ASN B 163 . ? 1_555 ? 32 AC2 20 HIS B 165 ? HIS B 164 . ? 1_555 ? 33 AC2 20 GLY B 166 ? GLY B 165 . ? 1_555 ? 34 AC2 20 PHE B 212 ? PHE B 211 . ? 1_555 ? 35 AC2 20 HOH F . ? HOH B 1022 . ? 1_555 ? 36 AC2 20 HOH F . ? HOH B 1024 . ? 1_555 ? 37 AC2 20 HOH F . ? HOH B 1047 . ? 2_555 ? 38 AC2 20 HOH F . ? HOH B 1069 . ? 1_555 ? # _atom_sites.entry_id 5QC5 _atom_sites.fract_transf_matrix[1][1] 0.008847 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002864 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027027 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009994 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 0 0 ILE ILE A . n A 1 2 LEU 2 1 1 LEU LEU A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 TRP 8 7 7 TRP TRP A . n A 1 9 ARG 9 8 8 ARG ARG A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 CYS 13 12 12 CYS CYS A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 THR 15 14 14 THR THR A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 TYR 19 18 18 TYR TYR A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 CYS 23 22 22 CYS CYS A . n A 1 24 GLY 24 23 23 GLY GLY A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 TRP 27 26 26 TRP TRP A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 ALA 31 30 30 ALA ALA A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 GLN 38 37 37 GLN GLN A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 THR 43 42 42 THR THR A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 ASP 56 55 55 ASP ASP A . n A 1 57 CYS 57 56 56 CYS CYS A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 LYS 61 60 60 LYS LYS A . n A 1 62 TYR 62 61 61 TYR TYR A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 ASN 64 63 63 ASN ASN A . n A 1 65 LYS 65 64 64 LYS LYS A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 CYS 67 66 66 CYS CYS A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 GLY 70 69 69 GLY GLY A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 MET 72 71 71 MET MET A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 PHE 76 75 75 PHE PHE A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 TYR 78 77 77 TYR TYR A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 ASN 82 81 81 ASN ASN A . n A 1 83 LYS 83 82 82 LYS LYS A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 TYR 91 90 90 TYR TYR A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 TYR 93 92 92 TYR TYR A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 MET 96 95 95 MET MET A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 GLN 98 97 97 GLN GLN A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 CYS 100 99 99 CYS CYS A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 TYR 102 101 101 TYR TYR A . n A 1 103 ASP 103 102 102 ASP ASP A . n A 1 104 SER 104 103 103 SER SER A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 TYR 106 105 105 TYR TYR A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 CYS 111 110 110 CYS CYS A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 LYS 113 112 112 LYS LYS A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 TYR 119 118 118 TYR TYR A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 ASP 123 122 122 ASP ASP A . n A 1 124 VAL 124 123 123 VAL VAL A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 ALA 130 129 129 ALA ALA A . n A 1 131 ASN 131 130 130 ASN ASN A . n A 1 132 LYS 132 131 131 LYS LYS A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 PRO 134 133 133 PRO PRO A . n A 1 135 VAL 135 134 134 VAL VAL A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 ASP 140 139 139 ASP ASP A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 HIS 143 142 142 HIS HIS A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 PHE 146 145 145 PHE PHE A . n A 1 147 PHE 147 146 146 PHE PHE A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 TYR 149 148 148 TYR TYR A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 SER 151 150 150 SER SER A . n A 1 152 GLY 152 151 151 GLY GLY A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 TYR 154 153 153 TYR TYR A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 PRO 157 156 156 PRO PRO A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 CYS 159 158 158 CYS CYS A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 ASN 162 161 161 ASN ASN A . n A 1 163 VAL 163 162 162 VAL VAL A . n A 1 164 ASN 164 163 163 ASN ASN A . n A 1 165 HIS 165 164 164 HIS HIS A . n A 1 166 GLY 166 165 165 GLY GLY A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 LEU 168 167 167 LEU LEU A . n A 1 169 VAL 169 168 168 VAL VAL A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 TYR 172 171 171 TYR TYR A . n A 1 173 GLY 173 172 172 GLY GLY A . n A 1 174 ASP 174 173 173 ASP ASP A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 ASN 176 175 175 ASN ASN A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 GLU 179 178 178 GLU GLU A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 TRP 181 180 180 TRP TRP A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 LYS 184 183 183 LYS LYS A . n A 1 185 ASN 185 184 184 ASN ASN A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 TRP 187 186 186 TRP TRP A . n A 1 188 GLY 188 187 187 GLY GLY A . n A 1 189 HIS 189 188 188 HIS HIS A . n A 1 190 ASN 190 189 189 ASN ASN A . n A 1 191 PHE 191 190 190 PHE PHE A . n A 1 192 GLY 192 191 191 GLY GLY A . n A 1 193 GLU 193 192 192 GLU GLU A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 GLY 195 194 194 GLY GLY A . n A 1 196 TYR 196 195 195 TYR TYR A . n A 1 197 ILE 197 196 196 ILE ILE A . n A 1 198 ARG 198 197 197 ARG ARG A . n A 1 199 MET 199 198 198 MET MET A . n A 1 200 ALA 200 199 199 ALA ALA A . n A 1 201 ARG 201 200 200 ARG ARG A . n A 1 202 ASN 202 201 201 ASN ASN A . n A 1 203 LYS 203 202 202 LYS LYS A . n A 1 204 GLY 204 203 203 GLY GLY A . n A 1 205 ASN 205 204 204 ASN ASN A . n A 1 206 HIS 206 205 205 HIS HIS A . n A 1 207 CYS 207 206 206 CYS CYS A . n A 1 208 GLY 208 207 207 GLY GLY A . n A 1 209 ILE 209 208 208 ILE ILE A . n A 1 210 ALA 210 209 209 ALA ALA A . n A 1 211 SER 211 210 210 SER SER A . n A 1 212 PHE 212 211 211 PHE PHE A . n A 1 213 PRO 213 212 212 PRO PRO A . n A 1 214 SER 214 213 213 SER SER A . n A 1 215 TYR 215 214 214 TYR TYR A . n A 1 216 PRO 216 215 215 PRO PRO A . n A 1 217 GLU 217 216 216 GLU GLU A . n A 1 218 ILE 218 217 217 ILE ILE A . n A 1 219 LEU 219 218 218 LEU LEU A . n A 1 220 GLN 220 219 219 GLN GLN A . n A 1 221 GLY 221 220 ? ? ? A . n A 1 222 GLY 222 221 ? ? ? A . n A 1 223 GLY 223 222 ? ? ? A . n B 1 1 ILE 1 0 ? ? ? B . n B 1 2 LEU 2 1 1 LEU LEU B . n B 1 3 PRO 3 2 2 PRO PRO B . n B 1 4 ASP 4 3 3 ASP ASP B . n B 1 5 SER 5 4 4 SER SER B . n B 1 6 VAL 6 5 5 VAL VAL B . n B 1 7 ASP 7 6 6 ASP ASP B . n B 1 8 TRP 8 7 7 TRP TRP B . n B 1 9 ARG 9 8 8 ARG ARG B . n B 1 10 GLU 10 9 9 GLU GLU B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 CYS 13 12 12 CYS CYS B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 THR 15 14 14 THR THR B . n B 1 16 GLU 16 15 15 GLU GLU B . n B 1 17 VAL 17 16 16 VAL VAL B . n B 1 18 LYS 18 17 17 LYS LYS B . n B 1 19 TYR 19 18 18 TYR TYR B . n B 1 20 GLN 20 19 19 GLN GLN B . n B 1 21 GLY 21 20 20 GLY GLY B . n B 1 22 SER 22 21 21 SER SER B . n B 1 23 CYS 23 22 22 CYS CYS B . n B 1 24 GLY 24 23 23 GLY GLY B . n B 1 25 ALA 25 24 24 ALA ALA B . n B 1 26 SER 26 25 25 SER SER B . n B 1 27 TRP 27 26 26 TRP TRP B . n B 1 28 ALA 28 27 27 ALA ALA B . n B 1 29 PHE 29 28 28 PHE PHE B . n B 1 30 SER 30 29 29 SER SER B . n B 1 31 ALA 31 30 30 ALA ALA B . n B 1 32 VAL 32 31 31 VAL VAL B . n B 1 33 GLY 33 32 32 GLY GLY B . n B 1 34 ALA 34 33 33 ALA ALA B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 GLU 36 35 35 GLU GLU B . n B 1 37 ALA 37 36 36 ALA ALA B . n B 1 38 GLN 38 37 37 GLN GLN B . n B 1 39 LEU 39 38 38 LEU LEU B . n B 1 40 LYS 40 39 39 LYS LYS B . n B 1 41 LEU 41 40 40 LEU LEU B . n B 1 42 LYS 42 41 41 LYS LYS B . n B 1 43 THR 43 42 42 THR THR B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 LYS 45 44 44 LYS LYS B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 VAL 47 46 46 VAL VAL B . n B 1 48 SER 48 47 47 SER SER B . n B 1 49 LEU 49 48 48 LEU LEU B . n B 1 50 SER 50 49 49 SER SER B . n B 1 51 ALA 51 50 50 ALA ALA B . n B 1 52 GLN 52 51 51 GLN GLN B . n B 1 53 ASN 53 52 52 ASN ASN B . n B 1 54 LEU 54 53 53 LEU LEU B . n B 1 55 VAL 55 54 54 VAL VAL B . n B 1 56 ASP 56 55 55 ASP ASP B . n B 1 57 CYS 57 56 56 CYS CYS B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 THR 59 58 58 THR THR B . n B 1 60 GLU 60 59 59 GLU GLU B . n B 1 61 LYS 61 60 60 LYS LYS B . n B 1 62 TYR 62 61 61 TYR TYR B . n B 1 63 GLY 63 62 62 GLY GLY B . n B 1 64 ASN 64 63 63 ASN ASN B . n B 1 65 LYS 65 64 64 LYS LYS B . n B 1 66 GLY 66 65 65 GLY GLY B . n B 1 67 CYS 67 66 66 CYS CYS B . n B 1 68 ASN 68 67 67 ASN ASN B . n B 1 69 GLY 69 68 68 GLY GLY B . n B 1 70 GLY 70 69 69 GLY GLY B . n B 1 71 PHE 71 70 70 PHE PHE B . n B 1 72 MET 72 71 71 MET MET B . n B 1 73 THR 73 72 72 THR THR B . n B 1 74 THR 74 73 73 THR THR B . n B 1 75 ALA 75 74 74 ALA ALA B . n B 1 76 PHE 76 75 75 PHE PHE B . n B 1 77 GLN 77 76 76 GLN GLN B . n B 1 78 TYR 78 77 77 TYR TYR B . n B 1 79 ILE 79 78 78 ILE ILE B . n B 1 80 ILE 80 79 79 ILE ILE B . n B 1 81 ASP 81 80 80 ASP ASP B . n B 1 82 ASN 82 81 81 ASN ASN B . n B 1 83 LYS 83 82 82 LYS LYS B . n B 1 84 GLY 84 83 83 GLY GLY B . n B 1 85 ILE 85 84 84 ILE ILE B . n B 1 86 ASP 86 85 85 ASP ASP B . n B 1 87 SER 87 86 86 SER SER B . n B 1 88 ASP 88 87 87 ASP ASP B . n B 1 89 ALA 89 88 88 ALA ALA B . n B 1 90 SER 90 89 89 SER SER B . n B 1 91 TYR 91 90 90 TYR TYR B . n B 1 92 PRO 92 91 91 PRO PRO B . n B 1 93 TYR 93 92 92 TYR TYR B . n B 1 94 LYS 94 93 93 LYS LYS B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 MET 96 95 95 MET MET B . n B 1 97 ASP 97 96 96 ASP ASP B . n B 1 98 GLN 98 97 97 GLN GLN B . n B 1 99 LYS 99 98 98 LYS LYS B . n B 1 100 CYS 100 99 99 CYS CYS B . n B 1 101 GLN 101 100 100 GLN GLN B . n B 1 102 TYR 102 101 101 TYR TYR B . n B 1 103 ASP 103 102 102 ASP ASP B . n B 1 104 SER 104 103 103 SER SER B . n B 1 105 LYS 105 104 104 LYS LYS B . n B 1 106 TYR 106 105 105 TYR TYR B . n B 1 107 ARG 107 106 106 ARG ARG B . n B 1 108 ALA 108 107 107 ALA ALA B . n B 1 109 ALA 109 108 108 ALA ALA B . n B 1 110 THR 110 109 109 THR THR B . n B 1 111 CYS 111 110 110 CYS CYS B . n B 1 112 SER 112 111 111 SER SER B . n B 1 113 LYS 113 112 112 LYS LYS B . n B 1 114 TYR 114 113 113 TYR TYR B . n B 1 115 THR 115 114 114 THR THR B . n B 1 116 GLU 116 115 115 GLU GLU B . n B 1 117 LEU 117 116 116 LEU LEU B . n B 1 118 PRO 118 117 117 PRO PRO B . n B 1 119 TYR 119 118 118 TYR TYR B . n B 1 120 GLY 120 119 119 GLY GLY B . n B 1 121 ARG 121 120 120 ARG ARG B . n B 1 122 GLU 122 121 121 GLU GLU B . n B 1 123 ASP 123 122 122 ASP ASP B . n B 1 124 VAL 124 123 123 VAL VAL B . n B 1 125 LEU 125 124 124 LEU LEU B . n B 1 126 LYS 126 125 125 LYS LYS B . n B 1 127 GLU 127 126 126 GLU GLU B . n B 1 128 ALA 128 127 127 ALA ALA B . n B 1 129 VAL 129 128 128 VAL VAL B . n B 1 130 ALA 130 129 129 ALA ALA B . n B 1 131 ASN 131 130 130 ASN ASN B . n B 1 132 LYS 132 131 131 LYS LYS B . n B 1 133 GLY 133 132 132 GLY GLY B . n B 1 134 PRO 134 133 133 PRO PRO B . n B 1 135 VAL 135 134 134 VAL VAL B . n B 1 136 SER 136 135 135 SER SER B . n B 1 137 VAL 137 136 136 VAL VAL B . n B 1 138 GLY 138 137 137 GLY GLY B . n B 1 139 VAL 139 138 138 VAL VAL B . n B 1 140 ASP 140 139 139 ASP ASP B . n B 1 141 ALA 141 140 140 ALA ALA B . n B 1 142 ARG 142 141 141 ARG ARG B . n B 1 143 HIS 143 142 142 HIS HIS B . n B 1 144 PRO 144 143 143 PRO PRO B . n B 1 145 SER 145 144 144 SER SER B . n B 1 146 PHE 146 145 145 PHE PHE B . n B 1 147 PHE 147 146 146 PHE PHE B . n B 1 148 LEU 148 147 147 LEU LEU B . n B 1 149 TYR 149 148 148 TYR TYR B . n B 1 150 ARG 150 149 149 ARG ARG B . n B 1 151 SER 151 150 150 SER SER B . n B 1 152 GLY 152 151 151 GLY GLY B . n B 1 153 VAL 153 152 152 VAL VAL B . n B 1 154 TYR 154 153 153 TYR TYR B . n B 1 155 TYR 155 154 154 TYR TYR B . n B 1 156 GLU 156 155 155 GLU GLU B . n B 1 157 PRO 157 156 156 PRO PRO B . n B 1 158 SER 158 157 157 SER SER B . n B 1 159 CYS 159 158 158 CYS CYS B . n B 1 160 THR 160 159 159 THR THR B . n B 1 161 GLN 161 160 160 GLN GLN B . n B 1 162 ASN 162 161 161 ASN ASN B . n B 1 163 VAL 163 162 162 VAL VAL B . n B 1 164 ASN 164 163 163 ASN ASN B . n B 1 165 HIS 165 164 164 HIS HIS B . n B 1 166 GLY 166 165 165 GLY GLY B . n B 1 167 VAL 167 166 166 VAL VAL B . n B 1 168 LEU 168 167 167 LEU LEU B . n B 1 169 VAL 169 168 168 VAL VAL B . n B 1 170 VAL 170 169 169 VAL VAL B . n B 1 171 GLY 171 170 170 GLY GLY B . n B 1 172 TYR 172 171 171 TYR TYR B . n B 1 173 GLY 173 172 172 GLY GLY B . n B 1 174 ASP 174 173 173 ASP ASP B . n B 1 175 LEU 175 174 174 LEU LEU B . n B 1 176 ASN 176 175 175 ASN ASN B . n B 1 177 GLY 177 176 176 GLY GLY B . n B 1 178 LYS 178 177 177 LYS LYS B . n B 1 179 GLU 179 178 178 GLU GLU B . n B 1 180 TYR 180 179 179 TYR TYR B . n B 1 181 TRP 181 180 180 TRP TRP B . n B 1 182 LEU 182 181 181 LEU LEU B . n B 1 183 VAL 183 182 182 VAL VAL B . n B 1 184 LYS 184 183 183 LYS LYS B . n B 1 185 ASN 185 184 184 ASN ASN B . n B 1 186 SER 186 185 185 SER SER B . n B 1 187 TRP 187 186 186 TRP TRP B . n B 1 188 GLY 188 187 187 GLY GLY B . n B 1 189 HIS 189 188 188 HIS HIS B . n B 1 190 ASN 190 189 189 ASN ASN B . n B 1 191 PHE 191 190 190 PHE PHE B . n B 1 192 GLY 192 191 191 GLY GLY B . n B 1 193 GLU 193 192 192 GLU GLU B . n B 1 194 GLU 194 193 193 GLU GLU B . n B 1 195 GLY 195 194 194 GLY GLY B . n B 1 196 TYR 196 195 195 TYR TYR B . n B 1 197 ILE 197 196 196 ILE ILE B . n B 1 198 ARG 198 197 197 ARG ARG B . n B 1 199 MET 199 198 198 MET MET B . n B 1 200 ALA 200 199 199 ALA ALA B . n B 1 201 ARG 201 200 200 ARG ARG B . n B 1 202 ASN 202 201 201 ASN ASN B . n B 1 203 LYS 203 202 202 LYS LYS B . n B 1 204 GLY 204 203 203 GLY GLY B . n B 1 205 ASN 205 204 204 ASN ASN B . n B 1 206 HIS 206 205 205 HIS HIS B . n B 1 207 CYS 207 206 206 CYS CYS B . n B 1 208 GLY 208 207 207 GLY GLY B . n B 1 209 ILE 209 208 208 ILE ILE B . n B 1 210 ALA 210 209 209 ALA ALA B . n B 1 211 SER 211 210 210 SER SER B . n B 1 212 PHE 212 211 211 PHE PHE B . n B 1 213 PRO 213 212 212 PRO PRO B . n B 1 214 SER 214 213 213 SER SER B . n B 1 215 TYR 215 214 214 TYR TYR B . n B 1 216 PRO 216 215 215 PRO PRO B . n B 1 217 GLU 217 216 216 GLU GLU B . n B 1 218 ILE 218 217 217 ILE ILE B . n B 1 219 LEU 219 218 218 LEU LEU B . n B 1 220 GLN 220 219 219 GLN GLN B . n B 1 221 GLY 221 220 220 GLY GLY B . n B 1 222 GLY 222 221 ? ? ? B . n B 1 223 GLY 223 222 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BAJ 1 901 901 BAJ BAJ A . D 2 BAJ 1 901 901 BAJ BAJ B . E 3 HOH 1 1001 1001 HOH HOH A . E 3 HOH 2 1002 1002 HOH HOH A . E 3 HOH 3 1003 1003 HOH HOH A . E 3 HOH 4 1004 1004 HOH HOH A . E 3 HOH 5 1005 1005 HOH HOH A . E 3 HOH 6 1006 1006 HOH HOH A . E 3 HOH 7 1007 1007 HOH HOH A . E 3 HOH 8 1008 1008 HOH HOH A . E 3 HOH 9 1009 1009 HOH HOH A . E 3 HOH 10 1010 1010 HOH HOH A . E 3 HOH 11 1011 1011 HOH HOH A . E 3 HOH 12 1012 1012 HOH HOH A . E 3 HOH 13 1013 1013 HOH HOH A . E 3 HOH 14 1014 1014 HOH HOH A . E 3 HOH 15 1015 1015 HOH HOH A . E 3 HOH 16 1016 1016 HOH HOH A . E 3 HOH 17 1017 1017 HOH HOH A . E 3 HOH 18 1018 1018 HOH HOH A . E 3 HOH 19 1019 1019 HOH HOH A . E 3 HOH 20 1020 1020 HOH HOH A . E 3 HOH 21 1021 1021 HOH HOH A . E 3 HOH 22 1022 1022 HOH HOH A . E 3 HOH 23 1023 1023 HOH HOH A . E 3 HOH 24 1024 1024 HOH HOH A . E 3 HOH 25 1025 1025 HOH HOH A . E 3 HOH 26 1026 1026 HOH HOH A . E 3 HOH 27 1027 1027 HOH HOH A . E 3 HOH 28 1028 1028 HOH HOH A . E 3 HOH 29 1029 1029 HOH HOH A . E 3 HOH 30 1030 1030 HOH HOH A . E 3 HOH 31 1031 1031 HOH HOH A . E 3 HOH 32 1032 1032 HOH HOH A . E 3 HOH 33 1033 1033 HOH HOH A . E 3 HOH 34 1034 1034 HOH HOH A . E 3 HOH 35 1035 1035 HOH HOH A . E 3 HOH 36 1036 1036 HOH HOH A . E 3 HOH 37 1037 1037 HOH HOH A . E 3 HOH 38 1038 1038 HOH HOH A . E 3 HOH 39 1039 1039 HOH HOH A . E 3 HOH 40 1040 1040 HOH HOH A . E 3 HOH 41 1041 1041 HOH HOH A . E 3 HOH 42 1042 1042 HOH HOH A . E 3 HOH 43 1043 1043 HOH HOH A . E 3 HOH 44 1044 1044 HOH HOH A . E 3 HOH 45 1045 1045 HOH HOH A . E 3 HOH 46 1046 1046 HOH HOH A . E 3 HOH 47 1047 1047 HOH HOH A . E 3 HOH 48 1048 1048 HOH HOH A . E 3 HOH 49 1049 1049 HOH HOH A . E 3 HOH 50 1050 1050 HOH HOH A . E 3 HOH 51 1051 1051 HOH HOH A . E 3 HOH 52 1052 1052 HOH HOH A . E 3 HOH 53 1053 1053 HOH HOH A . E 3 HOH 54 1054 1054 HOH HOH A . E 3 HOH 55 1055 1055 HOH HOH A . E 3 HOH 56 1056 1056 HOH HOH A . E 3 HOH 57 1057 1057 HOH HOH A . E 3 HOH 58 1058 1058 HOH HOH A . E 3 HOH 59 1059 1059 HOH HOH A . E 3 HOH 60 1060 1060 HOH HOH A . E 3 HOH 61 1061 1061 HOH HOH A . E 3 HOH 62 1062 1062 HOH HOH A . E 3 HOH 63 1063 1063 HOH HOH A . E 3 HOH 64 1064 1064 HOH HOH A . E 3 HOH 65 1065 1065 HOH HOH A . E 3 HOH 66 1066 1066 HOH HOH A . E 3 HOH 67 1067 1067 HOH HOH A . E 3 HOH 68 1068 1068 HOH HOH A . E 3 HOH 69 1069 1069 HOH HOH A . E 3 HOH 70 1070 1070 HOH HOH A . E 3 HOH 71 1071 1071 HOH HOH A . E 3 HOH 72 1072 1072 HOH HOH A . E 3 HOH 73 1073 1073 HOH HOH A . E 3 HOH 74 1074 1074 HOH HOH A . E 3 HOH 75 1075 1075 HOH HOH A . E 3 HOH 76 1076 1076 HOH HOH A . E 3 HOH 77 1077 1077 HOH HOH A . E 3 HOH 78 1078 1078 HOH HOH A . E 3 HOH 79 1079 1079 HOH HOH A . E 3 HOH 80 1080 1080 HOH HOH A . E 3 HOH 81 1081 1081 HOH HOH A . E 3 HOH 82 1082 1082 HOH HOH A . E 3 HOH 83 1083 1083 HOH HOH A . E 3 HOH 84 1084 1084 HOH HOH A . E 3 HOH 85 1085 1085 HOH HOH A . E 3 HOH 86 1086 1086 HOH HOH A . E 3 HOH 87 1087 1087 HOH HOH A . E 3 HOH 88 1088 1088 HOH HOH A . E 3 HOH 89 1089 1089 HOH HOH A . E 3 HOH 90 1090 1090 HOH HOH A . E 3 HOH 91 1091 1091 HOH HOH A . E 3 HOH 92 1092 1092 HOH HOH A . E 3 HOH 93 1093 1093 HOH HOH A . E 3 HOH 94 1094 1094 HOH HOH A . E 3 HOH 95 1095 1095 HOH HOH A . E 3 HOH 96 1096 1096 HOH HOH A . E 3 HOH 97 1097 1097 HOH HOH A . E 3 HOH 98 1098 1098 HOH HOH A . E 3 HOH 99 1099 1099 HOH HOH A . E 3 HOH 100 1100 1100 HOH HOH A . E 3 HOH 101 1101 1101 HOH HOH A . E 3 HOH 102 1102 1102 HOH HOH A . E 3 HOH 103 1103 1103 HOH HOH A . E 3 HOH 104 1104 1104 HOH HOH A . E 3 HOH 105 1105 1105 HOH HOH A . E 3 HOH 106 1106 1106 HOH HOH A . E 3 HOH 107 1107 1107 HOH HOH A . F 3 HOH 1 1001 1001 HOH HOH B . F 3 HOH 2 1002 1002 HOH HOH B . F 3 HOH 3 1003 1003 HOH HOH B . F 3 HOH 4 1004 1004 HOH HOH B . F 3 HOH 5 1005 1005 HOH HOH B . F 3 HOH 6 1006 1006 HOH HOH B . F 3 HOH 7 1007 1007 HOH HOH B . F 3 HOH 8 1008 1008 HOH HOH B . F 3 HOH 9 1009 1009 HOH HOH B . F 3 HOH 10 1010 1010 HOH HOH B . F 3 HOH 11 1011 1011 HOH HOH B . F 3 HOH 12 1012 1012 HOH HOH B . F 3 HOH 13 1013 1013 HOH HOH B . F 3 HOH 14 1014 1014 HOH HOH B . F 3 HOH 15 1015 1015 HOH HOH B . F 3 HOH 16 1016 1016 HOH HOH B . F 3 HOH 17 1017 1017 HOH HOH B . F 3 HOH 18 1018 1018 HOH HOH B . F 3 HOH 19 1019 1019 HOH HOH B . F 3 HOH 20 1020 1020 HOH HOH B . F 3 HOH 21 1021 1021 HOH HOH B . F 3 HOH 22 1022 1022 HOH HOH B . F 3 HOH 23 1023 1023 HOH HOH B . F 3 HOH 24 1024 1024 HOH HOH B . F 3 HOH 25 1025 1025 HOH HOH B . F 3 HOH 26 1026 1026 HOH HOH B . F 3 HOH 27 1027 1027 HOH HOH B . F 3 HOH 28 1028 1028 HOH HOH B . F 3 HOH 29 1029 1029 HOH HOH B . F 3 HOH 30 1030 1030 HOH HOH B . F 3 HOH 31 1031 1031 HOH HOH B . F 3 HOH 32 1032 1032 HOH HOH B . F 3 HOH 33 1033 1033 HOH HOH B . F 3 HOH 34 1034 1034 HOH HOH B . F 3 HOH 35 1035 1035 HOH HOH B . F 3 HOH 36 1036 1036 HOH HOH B . F 3 HOH 37 1037 1037 HOH HOH B . F 3 HOH 38 1038 1038 HOH HOH B . F 3 HOH 39 1039 1039 HOH HOH B . F 3 HOH 40 1040 1040 HOH HOH B . F 3 HOH 41 1041 1041 HOH HOH B . F 3 HOH 42 1042 1042 HOH HOH B . F 3 HOH 43 1043 1043 HOH HOH B . F 3 HOH 44 1044 1044 HOH HOH B . F 3 HOH 45 1045 1045 HOH HOH B . F 3 HOH 46 1046 1046 HOH HOH B . F 3 HOH 47 1047 1047 HOH HOH B . F 3 HOH 48 1048 1048 HOH HOH B . F 3 HOH 49 1049 1049 HOH HOH B . F 3 HOH 50 1050 1050 HOH HOH B . F 3 HOH 51 1051 1051 HOH HOH B . F 3 HOH 52 1052 1052 HOH HOH B . F 3 HOH 53 1053 1053 HOH HOH B . F 3 HOH 54 1054 1054 HOH HOH B . F 3 HOH 55 1055 1055 HOH HOH B . F 3 HOH 56 1056 1056 HOH HOH B . F 3 HOH 57 1057 1057 HOH HOH B . F 3 HOH 58 1058 1058 HOH HOH B . F 3 HOH 59 1059 1059 HOH HOH B . F 3 HOH 60 1060 1060 HOH HOH B . F 3 HOH 61 1061 1061 HOH HOH B . F 3 HOH 62 1062 1062 HOH HOH B . F 3 HOH 63 1063 1063 HOH HOH B . F 3 HOH 64 1064 1064 HOH HOH B . F 3 HOH 65 1065 1065 HOH HOH B . F 3 HOH 66 1066 1066 HOH HOH B . F 3 HOH 67 1067 1067 HOH HOH B . F 3 HOH 68 1068 1068 HOH HOH B . F 3 HOH 69 1069 1069 HOH HOH B . F 3 HOH 70 1070 1070 HOH HOH B . F 3 HOH 71 1071 1071 HOH HOH B . F 3 HOH 72 1072 1072 HOH HOH B . F 3 HOH 73 1073 1073 HOH HOH B . F 3 HOH 74 1074 1074 HOH HOH B . F 3 HOH 75 1075 1075 HOH HOH B . F 3 HOH 76 1076 1076 HOH HOH B . F 3 HOH 77 1077 1077 HOH HOH B . F 3 HOH 78 1078 1078 HOH HOH B . F 3 HOH 79 1079 1079 HOH HOH B . F 3 HOH 80 1080 1080 HOH HOH B . F 3 HOH 81 1081 1081 HOH HOH B . F 3 HOH 82 1082 1082 HOH HOH B . F 3 HOH 83 1083 1083 HOH HOH B . F 3 HOH 84 1084 1084 HOH HOH B . F 3 HOH 85 1085 1085 HOH HOH B . F 3 HOH 86 1086 1086 HOH HOH B . F 3 HOH 87 1087 1087 HOH HOH B . F 3 HOH 88 1088 1088 HOH HOH B . F 3 HOH 89 1089 1089 HOH HOH B . F 3 HOH 90 1090 1090 HOH HOH B . F 3 HOH 91 1091 1091 HOH HOH B . F 3 HOH 92 1092 1092 HOH HOH B . F 3 HOH 93 1093 1093 HOH HOH B . F 3 HOH 94 1094 1094 HOH HOH B . F 3 HOH 95 1095 1095 HOH HOH B . F 3 HOH 96 1096 1096 HOH HOH B . F 3 HOH 97 1097 1097 HOH HOH B . F 3 HOH 98 1098 1098 HOH HOH B . F 3 HOH 99 1099 1099 HOH HOH B . F 3 HOH 100 1100 1100 HOH HOH B . F 3 HOH 101 1101 1101 HOH HOH B . F 3 HOH 102 1102 1102 HOH HOH B . F 3 HOH 103 1103 1103 HOH HOH B . F 3 HOH 104 1104 1104 HOH HOH B . F 3 HOH 105 1105 1105 HOH HOH B . F 3 HOH 106 1106 1106 HOH HOH B . F 3 HOH 107 1107 1107 HOH HOH B . F 3 HOH 108 1108 1108 HOH HOH B . F 3 HOH 109 1109 1109 HOH HOH B . F 3 HOH 110 1110 1110 HOH HOH B . F 3 HOH 111 1111 1111 HOH HOH B . F 3 HOH 112 1112 1112 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-12-20 2 'Structure model' 1 1 2018-02-21 3 'Structure model' 2 0 2018-06-06 4 'Structure model' 2 1 2021-02-10 5 'Structure model' 2 2 2021-11-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_deposit_group 2 3 'Structure model' atom_site 3 3 'Structure model' pdbx_nonpoly_scheme 4 3 'Structure model' pdbx_poly_seq_scheme 5 3 'Structure model' refine 6 3 'Structure model' refine_hist 7 3 'Structure model' reflns 8 4 'Structure model' audit_author 9 4 'Structure model' citation_author 10 5 'Structure model' database_2 11 5 'Structure model' pdbx_deposit_group # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_deposit_group.group_type' 2 3 'Structure model' '_atom_site.Cartn_z' 3 3 'Structure model' '_atom_site.occupancy' 4 3 'Structure model' '_pdbx_nonpoly_scheme.auth_mon_id' 5 3 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num' 6 3 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 7 3 'Structure model' '_refine.ls_R_factor_R_free' 8 3 'Structure model' '_refine.ls_R_factor_R_work' 9 3 'Structure model' '_refine.ls_R_factor_obs' 10 3 'Structure model' '_refine.ls_d_res_low' 11 3 'Structure model' '_refine.ls_percent_reflns_obs' 12 3 'Structure model' '_refine_hist.d_res_low' 13 3 'Structure model' '_reflns.percent_possible_obs' 14 4 'Structure model' '_audit_author.identifier_ORCID' 15 4 'Structure model' '_citation_author.identifier_ORCID' 16 5 'Structure model' '_database_2.pdbx_DOI' 17 5 'Structure model' '_database_2.pdbx_database_accession' 18 5 'Structure model' '_pdbx_deposit_group.group_description' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX '(1.12_2829: ???)' ? ? ? ? refinement ? ? ? 2 PDB_EXTRACT 3.23 'Dec. 13, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 SCALA . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 58 ? ? -118.05 -124.22 2 1 ASN A 163 ? ? -143.00 -0.89 3 1 ASN A 175 ? ? 45.77 70.71 4 1 THR B 58 ? ? -115.05 -126.35 5 1 ASN B 163 ? ? -145.07 -0.55 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 0 ? CG1 ? A ILE 1 CG1 2 1 Y 1 A ILE 0 ? CG2 ? A ILE 1 CG2 3 1 Y 1 A ILE 0 ? CD1 ? A ILE 1 CD1 4 1 Y 1 A LYS 60 ? CD ? A LYS 61 CD 5 1 Y 1 A LYS 60 ? CE ? A LYS 61 CE 6 1 Y 1 A LYS 60 ? NZ ? A LYS 61 NZ 7 1 Y 1 A LYS 98 ? CG ? A LYS 99 CG 8 1 Y 1 A LYS 98 ? CD ? A LYS 99 CD 9 1 Y 1 A LYS 98 ? CE ? A LYS 99 CE 10 1 Y 1 A LYS 98 ? NZ ? A LYS 99 NZ 11 1 Y 1 B LYS 82 ? CE ? B LYS 83 CE 12 1 Y 1 B LYS 82 ? NZ ? B LYS 83 NZ 13 1 Y 1 B LYS 98 ? CG ? B LYS 99 CG 14 1 Y 1 B LYS 98 ? CD ? B LYS 99 CD 15 1 Y 1 B LYS 98 ? CE ? B LYS 99 CE 16 1 Y 1 B LYS 98 ? NZ ? B LYS 99 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 220 ? A GLY 221 2 1 Y 1 A GLY 221 ? A GLY 222 3 1 Y 1 A GLY 222 ? A GLY 223 4 1 Y 1 B ILE 0 ? B ILE 1 5 1 Y 1 B GLY 221 ? B GLY 222 6 1 Y 1 B GLY 222 ? B GLY 223 # _pdbx_deposit_group.group_id G_1002040 _pdbx_deposit_group.group_description 'Ligand binding to Cathepsin S' _pdbx_deposit_group.group_title 'Ligand binding to Cathepsin S' _pdbx_deposit_group.group_type undefined # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;1-[5-{1-[3-(4-tert-butylpiperidin-1-yl)propyl]-5-(methylsulfonyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}-2-(trifluoromethyl)phenyl]-N-[(4-fluorophenyl)methyl]methanamine ; BAJ 3 water HOH #