HEADER HYDROLASE 01-DEC-17 5QD0 TITLE CRYSTAL STRUCTURE OF BACE COMPLEX WITHBMC006 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-SECRETASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ASPARTYL PROTEASE 2,ASP 2,BETA-SITE AMYLOID PRECURSOR COMPND 5 PROTEIN CLEAVING ENZYME 1,BETA-SITE APP CLEAVING ENZYME 1,MEMAPSIN-2, COMPND 6 MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2; COMPND 7 EC: 3.4.23.46; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BACE1, BACE, KIAA1149; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLOASE, D3R, BACE, LIGAND DOCKING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.RONDEAU,C.SHAO,H.YANG,S.K.BURLEY REVDAT 3 10-FEB-21 5QD0 1 JRNL REVDAT 2 30-DEC-20 5QD0 1 AUTHOR REVDAT 1 03-JUN-20 5QD0 0 JRNL AUTH C.D.PARKS,Z.GAIEB,M.CHIU,H.YANG,C.SHAO,W.P.WALTERS, JRNL AUTH 2 J.M.JANSEN,G.MCGAUGHEY,R.A.LEWIS,S.D.BEMBENEK,M.K.AMERIKS, JRNL AUTH 3 T.MIRZADEGAN,S.K.BURLEY,R.E.AMARO,M.K.GILSON JRNL TITL D3R GRAND CHALLENGE 4: BLIND PREDICTION OF PROTEIN-LIGAND JRNL TITL 2 POSES, AFFINITY RANKINGS, AND RELATIVE BINDING FREE JRNL TITL 3 ENERGIES. JRNL REF J.COMPUT.AIDED MOL.DES. V. 34 99 2020 JRNL REFN ESSN 1573-4951 JRNL PMID 31974851 JRNL DOI 10.1007/S10822-020-00289-Y REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 47152 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1757 - 6.6791 0.99 2708 144 0.1692 0.2120 REMARK 3 2 6.6791 - 5.3038 1.00 2659 157 0.1732 0.1942 REMARK 3 3 5.3038 - 4.6341 1.00 2653 143 0.1394 0.1706 REMARK 3 4 4.6341 - 4.2107 1.00 2625 162 0.1333 0.1722 REMARK 3 5 4.2107 - 3.9091 1.00 2684 137 0.1459 0.1979 REMARK 3 6 3.9091 - 3.6787 1.00 2628 135 0.1509 0.1759 REMARK 3 7 3.6787 - 3.4946 1.00 2632 150 0.1622 0.2142 REMARK 3 8 3.4946 - 3.3425 1.00 2639 147 0.1748 0.2190 REMARK 3 9 3.3425 - 3.2138 1.00 2658 133 0.1871 0.2340 REMARK 3 10 3.2138 - 3.1030 1.00 2648 115 0.1889 0.2406 REMARK 3 11 3.1030 - 3.0060 1.00 2648 125 0.1824 0.2157 REMARK 3 12 3.0060 - 2.9200 1.00 2648 135 0.1858 0.2667 REMARK 3 13 2.9200 - 2.8432 1.00 2618 143 0.1898 0.2870 REMARK 3 14 2.8432 - 2.7738 1.00 2646 130 0.1981 0.2485 REMARK 3 15 2.7738 - 2.7108 1.00 2655 135 0.2045 0.2504 REMARK 3 16 2.7108 - 2.6531 1.00 2632 158 0.2254 0.2847 REMARK 3 17 2.6531 - 2.6000 0.92 2411 111 0.2327 0.3149 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9162 REMARK 3 ANGLE : 0.924 12444 REMARK 3 CHIRALITY : 0.059 1349 REMARK 3 PLANARITY : 0.006 1594 REMARK 3 DIHEDRAL : 14.920 5358 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7984 9.4630 27.2278 REMARK 3 T TENSOR REMARK 3 T11: 0.6201 T22: 0.5759 REMARK 3 T33: 0.5625 T12: 0.0437 REMARK 3 T13: -0.0454 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.3177 L22: 0.5641 REMARK 3 L33: 0.5324 L12: -0.0242 REMARK 3 L13: -0.4183 L23: -0.0478 REMARK 3 S TENSOR REMARK 3 S11: -0.2018 S12: -0.4979 S13: 0.4346 REMARK 3 S21: 0.3100 S22: 0.1848 S23: -0.2825 REMARK 3 S31: -0.2523 S32: 0.0802 S33: 0.0015 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.1709 18.3403 14.4700 REMARK 3 T TENSOR REMARK 3 T11: 0.7113 T22: 0.4629 REMARK 3 T33: 0.5630 T12: -0.0610 REMARK 3 T13: 0.0175 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8468 L22: 0.5181 REMARK 3 L33: 0.7040 L12: -0.3398 REMARK 3 L13: 0.3041 L23: -0.1152 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: 0.0767 S13: 0.4008 REMARK 3 S21: -0.0969 S22: -0.0092 S23: -0.1099 REMARK 3 S31: -0.0927 S32: -0.0578 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5698 7.4828 16.2335 REMARK 3 T TENSOR REMARK 3 T11: 0.5532 T22: 0.4467 REMARK 3 T33: 0.4084 T12: -0.0335 REMARK 3 T13: 0.0015 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.4767 L22: 2.0931 REMARK 3 L33: 1.7196 L12: -0.4342 REMARK 3 L13: 0.4597 L23: -0.8041 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: 0.1841 S13: 0.3167 REMARK 3 S21: -0.1164 S22: -0.0372 S23: -0.1400 REMARK 3 S31: -0.1486 S32: 0.1043 S33: -0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0073 -10.2682 17.7735 REMARK 3 T TENSOR REMARK 3 T11: 0.4055 T22: 0.3963 REMARK 3 T33: 0.3519 T12: -0.0186 REMARK 3 T13: -0.0857 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.9071 L22: 1.3350 REMARK 3 L33: 0.9950 L12: -0.0660 REMARK 3 L13: -0.6558 L23: 0.1010 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.1780 S13: -0.0377 REMARK 3 S21: -0.1705 S22: 0.0131 S23: 0.2241 REMARK 3 S31: 0.0314 S32: 0.0348 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 252 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5569 -5.2761 28.8785 REMARK 3 T TENSOR REMARK 3 T11: 0.5108 T22: 0.4289 REMARK 3 T33: 0.4146 T12: 0.0770 REMARK 3 T13: 0.0814 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.2108 L22: 1.1590 REMARK 3 L33: 1.0570 L12: 0.0797 REMARK 3 L13: -0.2186 L23: -0.8890 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.0143 S13: 0.0436 REMARK 3 S21: 0.3486 S22: 0.2902 S23: 0.2503 REMARK 3 S31: -0.1424 S32: -0.0769 S33: 0.0004 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1717 -0.8223 27.4206 REMARK 3 T TENSOR REMARK 3 T11: 0.5831 T22: 0.4932 REMARK 3 T33: 0.5239 T12: 0.0684 REMARK 3 T13: 0.0405 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.4476 L22: 0.6070 REMARK 3 L33: 0.3863 L12: 0.2201 REMARK 3 L13: 0.0011 L23: -0.4348 REMARK 3 S TENSOR REMARK 3 S11: -0.0587 S12: 0.1630 S13: 0.0232 REMARK 3 S21: 0.1262 S22: 0.0194 S23: 0.2039 REMARK 3 S31: -0.1072 S32: -0.0649 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 335 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4323 -11.7599 25.1136 REMARK 3 T TENSOR REMARK 3 T11: 0.4552 T22: 0.4713 REMARK 3 T33: 0.3826 T12: 0.0105 REMARK 3 T13: 0.0411 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 0.8151 L22: 1.8792 REMARK 3 L33: 0.6809 L12: -0.5505 REMARK 3 L13: 0.2230 L23: -1.1405 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0559 S13: 0.1124 REMARK 3 S21: 0.0119 S22: 0.0933 S23: 0.1218 REMARK 3 S31: -0.1219 S32: -0.0119 S33: -0.0003 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6697 11.5128 -0.1762 REMARK 3 T TENSOR REMARK 3 T11: 0.5162 T22: 0.6489 REMARK 3 T33: 0.4577 T12: -0.0343 REMARK 3 T13: -0.0447 T23: 0.0700 REMARK 3 L TENSOR REMARK 3 L11: 0.9009 L22: 0.1670 REMARK 3 L33: 0.1365 L12: -0.1756 REMARK 3 L13: -0.2213 L23: -0.0482 REMARK 3 S TENSOR REMARK 3 S11: 0.2061 S12: -0.7403 S13: -0.4088 REMARK 3 S21: 0.5928 S22: -0.2365 S23: 0.0445 REMARK 3 S31: 0.0304 S32: -0.6105 S33: 0.0008 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7843 11.0479 -4.6144 REMARK 3 T TENSOR REMARK 3 T11: 0.4223 T22: 0.7821 REMARK 3 T33: 0.5978 T12: -0.0696 REMARK 3 T13: 0.0167 T23: 0.1190 REMARK 3 L TENSOR REMARK 3 L11: 0.6327 L22: 0.6475 REMARK 3 L33: 1.0568 L12: 0.2418 REMARK 3 L13: 0.7479 L23: 0.5859 REMARK 3 S TENSOR REMARK 3 S11: 0.1188 S12: -0.3941 S13: -0.3241 REMARK 3 S21: 0.0375 S22: -0.1763 S23: 0.2152 REMARK 3 S31: 0.2548 S32: -0.4311 S33: 0.0004 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8868 13.2510 -10.8021 REMARK 3 T TENSOR REMARK 3 T11: 0.4297 T22: 0.5960 REMARK 3 T33: 0.5290 T12: 0.0425 REMARK 3 T13: -0.0224 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 1.8238 L22: 1.1296 REMARK 3 L33: 1.0516 L12: 0.4992 REMARK 3 L13: 0.6059 L23: 0.2442 REMARK 3 S TENSOR REMARK 3 S11: 0.0304 S12: -0.2148 S13: -0.1563 REMARK 3 S21: 0.0215 S22: 0.0455 S23: 0.3317 REMARK 3 S31: 0.0538 S32: -0.4394 S33: 0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7201 19.8076 -5.4099 REMARK 3 T TENSOR REMARK 3 T11: 0.5340 T22: 0.5076 REMARK 3 T33: 0.4328 T12: 0.0368 REMARK 3 T13: -0.0195 T23: 0.0585 REMARK 3 L TENSOR REMARK 3 L11: 0.8401 L22: 0.5706 REMARK 3 L33: 0.7592 L12: 0.7094 REMARK 3 L13: -0.0608 L23: -0.1255 REMARK 3 S TENSOR REMARK 3 S11: 0.2543 S12: -0.4937 S13: -0.1165 REMARK 3 S21: 0.3865 S22: -0.1698 S23: 0.0694 REMARK 3 S31: -0.1650 S32: -0.0788 S33: 0.0001 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3861 10.8776 -26.2988 REMARK 3 T TENSOR REMARK 3 T11: 0.4279 T22: 0.3636 REMARK 3 T33: 0.3729 T12: -0.0267 REMARK 3 T13: 0.0437 T23: -0.0655 REMARK 3 L TENSOR REMARK 3 L11: 1.5216 L22: 1.6903 REMARK 3 L33: 1.7690 L12: 0.8444 REMARK 3 L13: 0.1964 L23: -0.4707 REMARK 3 S TENSOR REMARK 3 S11: -0.1589 S12: 0.2426 S13: -0.2906 REMARK 3 S21: -0.4810 S22: 0.1361 S23: -0.0906 REMARK 3 S31: -0.0539 S32: -0.1257 S33: 0.0001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 252 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7621 -2.1720 -21.8505 REMARK 3 T TENSOR REMARK 3 T11: 0.4035 T22: 0.2462 REMARK 3 T33: 0.7297 T12: 0.0881 REMARK 3 T13: 0.0197 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.8425 L22: 0.1822 REMARK 3 L33: 1.5002 L12: -0.0218 REMARK 3 L13: 0.2069 L23: -0.5642 REMARK 3 S TENSOR REMARK 3 S11: 0.1893 S12: 0.0522 S13: -0.5413 REMARK 3 S21: -0.1969 S22: -0.3180 S23: -0.1458 REMARK 3 S31: 0.3541 S32: 0.3620 S33: -0.0274 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 295 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0207 0.4514 -18.5924 REMARK 3 T TENSOR REMARK 3 T11: 0.5065 T22: 0.3061 REMARK 3 T33: 0.6220 T12: -0.0202 REMARK 3 T13: -0.0108 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.6498 L22: 0.3340 REMARK 3 L33: 0.6943 L12: -0.1131 REMARK 3 L13: -0.3063 L23: 0.2318 REMARK 3 S TENSOR REMARK 3 S11: -0.0609 S12: 0.3028 S13: -0.3916 REMARK 3 S21: -0.3941 S22: -0.0604 S23: -0.3414 REMARK 3 S31: 0.2049 S32: 0.0718 S33: 0.0006 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 335 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8899 14.9786 -18.0081 REMARK 3 T TENSOR REMARK 3 T11: 0.4235 T22: 0.3807 REMARK 3 T33: 0.5065 T12: 0.0201 REMARK 3 T13: 0.0076 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 1.5289 L22: 1.2227 REMARK 3 L33: 0.6204 L12: 1.3755 REMARK 3 L13: -0.0030 L23: 0.0293 REMARK 3 S TENSOR REMARK 3 S11: 0.0943 S12: 0.0559 S13: -0.5552 REMARK 3 S21: -0.0418 S22: -0.0476 S23: -0.0225 REMARK 3 S31: -0.0548 S32: -0.0033 S33: -0.0004 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -2 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8022 -53.6455 40.7647 REMARK 3 T TENSOR REMARK 3 T11: 0.4269 T22: 0.6232 REMARK 3 T33: 0.6242 T12: -0.0702 REMARK 3 T13: -0.0138 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 0.7136 L22: 1.4914 REMARK 3 L33: 1.5273 L12: -0.2448 REMARK 3 L13: -0.4058 L23: 0.6619 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.0590 S13: -0.2035 REMARK 3 S21: 0.1901 S22: -0.1215 S23: 0.3877 REMARK 3 S31: 0.1288 S32: -0.4788 S33: -0.0008 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 66 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8950 -43.9959 39.4326 REMARK 3 T TENSOR REMARK 3 T11: 0.3215 T22: 0.4011 REMARK 3 T33: 0.4001 T12: 0.0113 REMARK 3 T13: -0.0593 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 0.8825 L22: 1.9741 REMARK 3 L33: 1.2182 L12: 0.3722 REMARK 3 L13: -0.5424 L23: -0.2471 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: -0.1068 S13: -0.0719 REMARK 3 S21: 0.0289 S22: -0.0344 S23: -0.0402 REMARK 3 S31: 0.1225 S32: -0.0906 S33: -0.0001 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 252 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2757 -21.6748 39.2989 REMARK 3 T TENSOR REMARK 3 T11: 0.5393 T22: 0.5018 REMARK 3 T33: 0.4996 T12: 0.1331 REMARK 3 T13: 0.0975 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.4106 L22: 1.1316 REMARK 3 L33: 1.0298 L12: 0.3537 REMARK 3 L13: -0.5528 L23: -1.0365 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: 0.0799 S13: 0.1433 REMARK 3 S21: 0.2341 S22: 0.2596 S23: 0.2404 REMARK 3 S31: -0.4226 S32: -0.0712 S33: 0.0094 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 296 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3766 -27.0092 40.6123 REMARK 3 T TENSOR REMARK 3 T11: 0.4531 T22: 0.5806 REMARK 3 T33: 0.5046 T12: 0.0452 REMARK 3 T13: 0.0723 T23: 0.0577 REMARK 3 L TENSOR REMARK 3 L11: 0.5074 L22: 0.6302 REMARK 3 L33: 0.5538 L12: 0.3752 REMARK 3 L13: -0.1954 L23: 0.0867 REMARK 3 S TENSOR REMARK 3 S11: 0.2186 S12: -0.1936 S13: 0.1483 REMARK 3 S21: 0.3833 S22: 0.0406 S23: 0.3304 REMARK 3 S31: 0.0394 S32: -0.2887 S33: 0.0003 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 335 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9763 -34.7044 30.0339 REMARK 3 T TENSOR REMARK 3 T11: 0.4137 T22: 0.4395 REMARK 3 T33: 0.4503 T12: 0.0433 REMARK 3 T13: 0.0099 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.7006 L22: 1.1475 REMARK 3 L33: 1.2463 L12: 0.8170 REMARK 3 L13: -0.5348 L23: -0.2496 REMARK 3 S TENSOR REMARK 3 S11: 0.1295 S12: -0.1257 S13: 0.0238 REMARK 3 S21: 0.0176 S22: 0.0772 S23: -0.0919 REMARK 3 S31: -0.0862 S32: -0.1686 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID -2 THROUGH 309 OR REMARK 3 RESID 315 THROUGH 383 OR (RESID 384 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD1 OR NAME REMARK 3 CD2 OR NAME CE1 OR NAME CE2 OR NAME CZ OR REMARK 3 NAME OH )))) REMARK 3 SELECTION : (CHAIN B AND RESID -2 THROUGH 384) REMARK 3 ATOM PAIRS NUMBER : 5356 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID -2 THROUGH 309 OR REMARK 3 RESID 315 THROUGH 383 OR (RESID 384 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD1 OR NAME REMARK 3 CD2 OR NAME CE1 OR NAME CE2 OR NAME CZ OR REMARK 3 NAME OH )))) REMARK 3 SELECTION : (CHAIN C AND (RESID -2 THROUGH 309 OR REMARK 3 RESID 315 THROUGH 384)) REMARK 3 ATOM PAIRS NUMBER : 5356 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5QD0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1001401793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97885 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47152 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 46.168 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN AT 19C BY VAPOUR REMARK 280 DIFFUSION IN HANGING DROPS, FROM 1.0M AMMONIUM PHOSPHATE, 0.1M REMARK 280 SODIUM CITRATE, PH 5.0. PROTEIN STOCK WAS BACE MUT46B BATCH XIV REMARK 280 6.3MG/ML IN 10MM TRIS-HCL PH 7.4, 25MM NACL, WITH A 7-FOLD REMARK 280 EXCESS OF BMC006 ADDED FROM A 50MM STOCK SOLUTION IN 90% DMSO-D6 REMARK 280 (2.0% DMSO IN DROP). A SOLUTION CONTAINING 1.2M AMMONIUM REMARK 280 PHOSPHATE, 0.1M SODIUM CITRATE PH 5.0, 25% GLYCEROL, 1MM BMC006 REMARK 280 AND 2.0% DMSO WAS USED AS CRYO-PROTECTANT., TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.18700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -15 REMARK 465 PRO A -14 REMARK 465 ASP A -13 REMARK 465 GLU A -12 REMARK 465 GLU A -11 REMARK 465 PRO A -10 REMARK 465 GLU A -9 REMARK 465 GLU A -8 REMARK 465 PRO A -7 REMARK 465 GLY A -6 REMARK 465 ARG A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 GLY A 158 REMARK 465 PHE A 159 REMARK 465 PRO A 160 REMARK 465 LEU A 161 REMARK 465 ASN A 162 REMARK 465 GLN A 163 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 VAL A 166 REMARK 465 LEU A 167 REMARK 465 ALA A 168 REMARK 465 VAL A 312 REMARK 465 ALA A 313 REMARK 465 THR A 314 REMARK 465 ASN A 385 REMARK 465 ILE A 386 REMARK 465 GLY B -15 REMARK 465 PRO B -14 REMARK 465 ASP B -13 REMARK 465 GLU B -12 REMARK 465 GLU B -11 REMARK 465 PRO B -10 REMARK 465 GLU B -9 REMARK 465 GLU B -8 REMARK 465 PRO B -7 REMARK 465 GLY B -6 REMARK 465 ARG B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 GLY B 158 REMARK 465 PHE B 159 REMARK 465 PRO B 160 REMARK 465 LEU B 161 REMARK 465 ASN B 162 REMARK 465 GLN B 163 REMARK 465 SER B 164 REMARK 465 GLU B 165 REMARK 465 VAL B 166 REMARK 465 LEU B 167 REMARK 465 ALA B 168 REMARK 465 GLU B 310 REMARK 465 ASP B 311 REMARK 465 VAL B 312 REMARK 465 ALA B 313 REMARK 465 THR B 314 REMARK 465 ILE B 386 REMARK 465 GLY C -15 REMARK 465 PRO C -14 REMARK 465 ASP C -13 REMARK 465 GLU C -12 REMARK 465 GLU C -11 REMARK 465 PRO C -10 REMARK 465 GLU C -9 REMARK 465 GLU C -8 REMARK 465 PRO C -7 REMARK 465 GLY C -6 REMARK 465 ARG C -5 REMARK 465 ARG C -4 REMARK 465 GLY C -3 REMARK 465 GLY C 158 REMARK 465 PHE C 159 REMARK 465 PRO C 160 REMARK 465 LEU C 161 REMARK 465 ASN C 162 REMARK 465 GLN C 163 REMARK 465 SER C 164 REMARK 465 GLU C 165 REMARK 465 VAL C 166 REMARK 465 LEU C 167 REMARK 465 ALA C 168 REMARK 465 ALA C 313 REMARK 465 THR C 314 REMARK 465 ILE C 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 515 O HOH C 523 2655 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 89 51.81 -96.52 REMARK 500 ASN A 114 3.99 82.71 REMARK 500 TRP A 197 -80.88 -136.87 REMARK 500 CYS A 359 50.38 -109.75 REMARK 500 HIS B 89 52.67 -96.17 REMARK 500 ASN B 114 5.48 80.13 REMARK 500 ALA B 122 -169.33 -79.45 REMARK 500 TRP B 197 -79.43 -136.10 REMARK 500 CYS B 359 50.87 -109.35 REMARK 500 HIS C 89 51.21 -96.39 REMARK 500 ASN C 114 6.61 81.07 REMARK 500 TRP C 197 -80.21 -135.83 REMARK 500 CYS C 359 52.76 -112.28 REMARK 500 ASP C 378 -167.49 -103.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E5Y A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E5Y B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E5Y C 401 DBREF 5QD0 A -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD0 B -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD0 C -13 386 UNP P56817 BACE1_HUMAN 48 447 SEQADV 5QD0 GLY A -15 UNP P56817 EXPRESSION TAG SEQADV 5QD0 PRO A -14 UNP P56817 EXPRESSION TAG SEQADV 5QD0 GLY B -15 UNP P56817 EXPRESSION TAG SEQADV 5QD0 PRO B -14 UNP P56817 EXPRESSION TAG SEQADV 5QD0 GLY C -15 UNP P56817 EXPRESSION TAG SEQADV 5QD0 PRO C -14 UNP P56817 EXPRESSION TAG SEQRES 1 A 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 A 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 A 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 A 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 A 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 A 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 A 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 A 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 A 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 A 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 A 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 A 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 A 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 A 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 A 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 A 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 A 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 A 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 A 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 A 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 A 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 A 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 A 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 A 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 A 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 A 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 A 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 A 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 A 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 A 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 A 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 B 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 B 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 B 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 B 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 B 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 B 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 B 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 B 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 B 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 B 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 B 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 B 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 B 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 B 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 B 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 B 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 B 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 B 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 B 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 B 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 B 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 B 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 B 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 B 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 B 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 B 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 B 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 B 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 B 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 B 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 B 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 C 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 C 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 C 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 C 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 C 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 C 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 C 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 C 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 C 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 C 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 C 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 C 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 C 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 C 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 C 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 C 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 C 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 C 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 C 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 C 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 C 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 C 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 C 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 C 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 C 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 C 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 C 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 C 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 C 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 C 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 C 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE HET E5Y A 401 34 HET E5Y B 401 34 HET E5Y C 401 34 HETNAM E5Y (5S,8S,10R)-8-[(1R)-1-HYDROXY-2-{[(5-PROPYL-1H-PYRAZOL- HETNAM 2 E5Y 3-YL)METHYL]AMINO}ETHYL]-4,5,10-TRIMETHYL-1-OXA-4,7- HETNAM 3 E5Y DIAZACYCLOHEXADECANE-3,6-DIONE FORMUL 4 E5Y 3(C25 H45 N5 O4) FORMUL 7 HOH *56(H2 O) HELIX 1 AA1 SER A -2 VAL A 3 5 6 HELIX 2 AA2 GLN A 53 SER A 57 5 5 HELIX 3 AA3 TYR A 123 ALA A 127 5 5 HELIX 4 AA4 PRO A 135 THR A 144 1 10 HELIX 5 AA5 ASP A 180 SER A 182 5 3 HELIX 6 AA6 ASP A 216 TYR A 222 5 7 HELIX 7 AA7 LYS A 238 SER A 252 1 15 HELIX 8 AA8 PRO A 276 PHE A 280 5 5 HELIX 9 AA9 LEU A 301 TYR A 305 1 5 HELIX 10 AB1 GLY A 334 GLU A 339 1 6 HELIX 11 AB2 ARG A 347 ARG A 349 5 3 HELIX 12 AB3 ASP A 378 GLY A 383 5 6 HELIX 13 AB4 SER B -2 VAL B 3 5 6 HELIX 14 AB5 GLN B 53 SER B 57 5 5 HELIX 15 AB6 TYR B 123 ALA B 127 5 5 HELIX 16 AB7 PRO B 135 THR B 144 1 10 HELIX 17 AB8 ASP B 180 SER B 182 5 3 HELIX 18 AB9 ASP B 216 TYR B 222 5 7 HELIX 19 AC1 LYS B 238 SER B 252 1 15 HELIX 20 AC2 PRO B 276 PHE B 280 5 5 HELIX 21 AC3 LEU B 301 TYR B 305 1 5 HELIX 22 AC4 GLY B 334 GLU B 339 1 6 HELIX 23 AC5 ARG B 347 ARG B 349 5 3 HELIX 24 AC6 ASP B 378 GLY B 383 5 6 HELIX 25 AC7 SER C -2 VAL C 3 5 6 HELIX 26 AC8 GLN C 53 SER C 57 5 5 HELIX 27 AC9 TYR C 123 ALA C 127 5 5 HELIX 28 AD1 PRO C 135 THR C 144 1 10 HELIX 29 AD2 ASP C 180 SER C 182 5 3 HELIX 30 AD3 ASP C 216 TYR C 222 5 7 HELIX 31 AD4 LYS C 238 SER C 252 1 15 HELIX 32 AD5 PRO C 276 PHE C 280 5 5 HELIX 33 AD6 LEU C 301 TYR C 305 1 5 HELIX 34 AD7 GLY C 334 GLU C 339 1 6 HELIX 35 AD8 ARG C 347 ARG C 349 5 3 HELIX 36 AD9 ASP C 378 GLY C 383 1 6 SHEET 1 AA1 9 ARG A 61 PRO A 70 0 SHEET 2 AA1 9 LYS A 75 SER A 86 -1 O GLY A 78 N VAL A 67 SHEET 3 AA1 9 TYR A 14 VAL A 20 -1 N THR A 19 O SER A 86 SHEET 4 AA1 9 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 5 AA1 9 VAL A 170 ILE A 176 -1 O GLY A 172 N LEU A 6 SHEET 6 AA1 9 PHE A 150 LEU A 154 -1 N GLN A 153 O SER A 173 SHEET 7 AA1 9 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 8 AA1 9 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 9 AA1 9 TYR A 184 PRO A 192 -1 N TRP A 189 O PHE A 354 SHEET 1 AA213 ARG A 61 PRO A 70 0 SHEET 2 AA213 LYS A 75 SER A 86 -1 O GLY A 78 N VAL A 67 SHEET 3 AA213 VAL A 95 ASP A 106 -1 O ILE A 99 N GLY A 81 SHEET 4 AA213 PHE A 38 GLY A 41 1 N VAL A 40 O ILE A 102 SHEET 5 AA213 GLY A 117 GLY A 120 -1 O ILE A 118 N ALA A 39 SHEET 6 AA213 GLN A 25 ASP A 32 1 N LEU A 30 O LEU A 119 SHEET 7 AA213 TYR A 14 VAL A 20 -1 N VAL A 16 O ILE A 29 SHEET 8 AA213 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 9 AA213 VAL A 170 ILE A 176 -1 O GLY A 172 N LEU A 6 SHEET 10 AA213 PHE A 150 LEU A 154 -1 N GLN A 153 O SER A 173 SHEET 11 AA213 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 12 AA213 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 13 AA213 TYR A 184 PRO A 192 -1 N TRP A 189 O PHE A 354 SHEET 1 AA3 5 GLU A 200 VAL A 201 0 SHEET 2 AA3 5 SER A 225 VAL A 227 -1 O SER A 225 N VAL A 201 SHEET 3 AA3 5 THR A 331 MET A 333 1 O MET A 333 N ILE A 226 SHEET 4 AA3 5 LEU A 234 PRO A 237 -1 N ARG A 235 O VAL A 332 SHEET 5 AA3 5 ILE A 324 SER A 327 1 O SER A 327 N LEU A 236 SHEET 1 AA4 5 GLN A 211 ASP A 212 0 SHEET 2 AA4 5 ILE A 203 ILE A 208 -1 N ILE A 208 O GLN A 211 SHEET 3 AA4 5 ILE A 283 MET A 288 -1 O SER A 284 N GLU A 207 SHEET 4 AA4 5 GLN A 294 ILE A 300 -1 O ILE A 300 N ILE A 283 SHEET 5 AA4 5 ALA A 369 VAL A 375 -1 O PHE A 374 N SER A 295 SHEET 1 AA5 3 VAL A 268 GLN A 271 0 SHEET 2 AA5 3 ASP A 317 PHE A 322 -1 O ASP A 318 N TRP A 270 SHEET 3 AA5 3 LEU A 306 VAL A 309 -1 N ARG A 307 O LYS A 321 SHEET 1 AA6 9 ARG B 61 PRO B 70 0 SHEET 2 AA6 9 LYS B 75 SER B 86 -1 O GLY B 78 N VAL B 67 SHEET 3 AA6 9 TYR B 15 VAL B 20 -1 N THR B 19 O SER B 86 SHEET 4 AA6 9 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 5 AA6 9 VAL B 170 ILE B 176 -1 O GLY B 172 N LEU B 6 SHEET 6 AA6 9 PHE B 150 LEU B 154 -1 N GLN B 153 O SER B 173 SHEET 7 AA6 9 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 8 AA6 9 ARG B 351 SER B 357 -1 O ALA B 355 N TYR B 342 SHEET 9 AA6 9 TYR B 184 PRO B 192 -1 N THR B 191 O ILE B 352 SHEET 1 AA713 ARG B 61 PRO B 70 0 SHEET 2 AA713 LYS B 75 SER B 86 -1 O GLY B 78 N VAL B 67 SHEET 3 AA713 THR B 94 ASP B 106 -1 O ALA B 101 N GLU B 79 SHEET 4 AA713 PHE B 38 GLY B 41 1 N VAL B 40 O ILE B 102 SHEET 5 AA713 GLY B 117 GLY B 120 -1 O ILE B 118 N ALA B 39 SHEET 6 AA713 GLN B 25 ASP B 32 1 N LEU B 30 O LEU B 119 SHEET 7 AA713 TYR B 15 VAL B 20 -1 N VAL B 16 O ILE B 29 SHEET 8 AA713 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 9 AA713 VAL B 170 ILE B 176 -1 O GLY B 172 N LEU B 6 SHEET 10 AA713 PHE B 150 LEU B 154 -1 N GLN B 153 O SER B 173 SHEET 11 AA713 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 12 AA713 ARG B 351 SER B 357 -1 O ALA B 355 N TYR B 342 SHEET 13 AA713 TYR B 184 PRO B 192 -1 N THR B 191 O ILE B 352 SHEET 1 AA8 5 GLN B 211 ASP B 212 0 SHEET 2 AA8 5 ILE B 203 ILE B 208 -1 N ILE B 208 O GLN B 211 SHEET 3 AA8 5 ILE B 283 MET B 288 -1 O SER B 284 N GLU B 207 SHEET 4 AA8 5 GLN B 294 ILE B 300 -1 O ILE B 300 N ILE B 283 SHEET 5 AA8 5 ALA B 369 VAL B 375 -1 O GLU B 371 N ARG B 297 SHEET 1 AA9 4 SER B 225 VAL B 227 0 SHEET 2 AA9 4 THR B 331 MET B 333 1 O MET B 333 N ILE B 226 SHEET 3 AA9 4 LEU B 234 PRO B 237 -1 N ARG B 235 O VAL B 332 SHEET 4 AA9 4 ILE B 324 SER B 327 1 O SER B 327 N LEU B 236 SHEET 1 AB1 3 VAL B 268 GLN B 271 0 SHEET 2 AB1 3 ASP B 317 PHE B 322 -1 O TYR B 320 N VAL B 268 SHEET 3 AB1 3 LEU B 306 PRO B 308 -1 N ARG B 307 O LYS B 321 SHEET 1 AB2 9 ARG C 61 PRO C 70 0 SHEET 2 AB2 9 LYS C 75 SER C 86 -1 O GLY C 78 N VAL C 67 SHEET 3 AB2 9 TYR C 15 VAL C 20 -1 N THR C 19 O SER C 86 SHEET 4 AB2 9 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 5 AB2 9 VAL C 170 ILE C 176 -1 O VAL C 170 N GLY C 8 SHEET 6 AB2 9 PHE C 150 LEU C 154 -1 N GLN C 153 O SER C 173 SHEET 7 AB2 9 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 8 AB2 9 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 9 AB2 9 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB313 ARG C 61 PRO C 70 0 SHEET 2 AB313 LYS C 75 SER C 86 -1 O GLY C 78 N VAL C 67 SHEET 3 AB313 VAL C 95 ASP C 106 -1 O ALA C 101 N GLU C 79 SHEET 4 AB313 PHE C 38 GLY C 41 1 N VAL C 40 O ILE C 102 SHEET 5 AB313 GLY C 117 GLY C 120 -1 O ILE C 118 N ALA C 39 SHEET 6 AB313 GLN C 25 ASP C 32 1 N LEU C 30 O LEU C 119 SHEET 7 AB313 TYR C 15 VAL C 20 -1 N VAL C 16 O ILE C 29 SHEET 8 AB313 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 9 AB313 VAL C 170 ILE C 176 -1 O VAL C 170 N GLY C 8 SHEET 10 AB313 PHE C 150 LEU C 154 -1 N GLN C 153 O SER C 173 SHEET 11 AB313 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 12 AB313 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 13 AB313 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB4 5 GLU C 200 VAL C 201 0 SHEET 2 AB4 5 SER C 225 VAL C 227 -1 O SER C 225 N VAL C 201 SHEET 3 AB4 5 THR C 331 MET C 333 1 O MET C 333 N ILE C 226 SHEET 4 AB4 5 LEU C 234 PRO C 237 -1 N ARG C 235 O VAL C 332 SHEET 5 AB4 5 ILE C 324 SER C 327 1 O SER C 327 N LEU C 236 SHEET 1 AB5 5 GLN C 211 ASP C 212 0 SHEET 2 AB5 5 ILE C 203 ILE C 208 -1 N ILE C 208 O GLN C 211 SHEET 3 AB5 5 ILE C 283 LEU C 287 -1 O SER C 284 N GLU C 207 SHEET 4 AB5 5 SER C 295 ILE C 300 -1 O ILE C 300 N ILE C 283 SHEET 5 AB5 5 ALA C 369 PHE C 374 -1 O PHE C 374 N SER C 295 SHEET 1 AB6 3 VAL C 268 GLN C 271 0 SHEET 2 AB6 3 ASP C 317 PHE C 322 -1 O ASP C 318 N TRP C 270 SHEET 3 AB6 3 LEU C 306 VAL C 309 -1 N ARG C 307 O LYS C 321 SSBOND 1 CYS A 155 CYS A 359 1555 1555 2.06 SSBOND 2 CYS A 217 CYS A 382 1555 1555 2.06 SSBOND 3 CYS A 269 CYS A 319 1555 1555 2.04 SSBOND 4 CYS B 155 CYS B 359 1555 1555 2.05 SSBOND 5 CYS B 217 CYS B 382 1555 1555 2.08 SSBOND 6 CYS B 269 CYS B 319 1555 1555 2.04 SSBOND 7 CYS C 155 CYS C 359 1555 1555 2.05 SSBOND 8 CYS C 217 CYS C 382 1555 1555 2.05 SSBOND 9 CYS C 269 CYS C 319 1555 1555 2.05 CISPEP 1 SER A 22 PRO A 23 0 -2.81 CISPEP 2 ARG A 128 PRO A 129 0 -0.93 CISPEP 3 TYR A 222 ASP A 223 0 3.13 CISPEP 4 GLY A 372 PRO A 373 0 1.10 CISPEP 5 SER B 22 PRO B 23 0 -2.08 CISPEP 6 ARG B 128 PRO B 129 0 -0.48 CISPEP 7 TYR B 222 ASP B 223 0 2.72 CISPEP 8 GLY B 372 PRO B 373 0 -1.74 CISPEP 9 SER C 22 PRO C 23 0 -3.28 CISPEP 10 ARG C 128 PRO C 129 0 -0.07 CISPEP 11 TYR C 222 ASP C 223 0 3.73 CISPEP 12 GLY C 372 PRO C 373 0 1.43 SITE 1 AC1 15 GLY A 11 LEU A 30 ASP A 32 GLY A 34 SITE 2 AC1 15 VAL A 69 PRO A 70 TYR A 71 THR A 72 SITE 3 AC1 15 GLN A 73 ILE A 126 ASP A 228 GLY A 230 SITE 4 AC1 15 THR A 231 THR A 232 HOH A 515 SITE 1 AC2 15 LEU B 30 ASP B 32 GLY B 34 PRO B 70 SITE 2 AC2 15 TYR B 71 THR B 72 GLN B 73 TRP B 115 SITE 3 AC2 15 ILE B 126 ARG B 128 TYR B 198 ASP B 228 SITE 4 AC2 15 GLY B 230 THR B 231 THR B 232 SITE 1 AC3 13 LEU C 30 ASP C 32 GLY C 34 SER C 35 SITE 2 AC3 13 TYR C 71 THR C 72 GLN C 73 ILE C 126 SITE 3 AC3 13 TYR C 198 ASP C 228 GLY C 230 THR C 231 SITE 4 AC3 13 THR C 232 CRYST1 79.919 102.374 98.643 90.00 104.69 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012513 0.000000 0.003280 0.00000 SCALE2 0.000000 0.009768 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010480 0.00000