HEADER HYDROLASE 01-DEC-17 5QD2 TITLE CRYSTAL STRUCTURE OF BACE COMPLEX WITH BMC017 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-SECRETASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ASPARTYL PROTEASE 2,ASP 2,BETA-SITE AMYLOID PRECURSOR COMPND 5 PROTEIN CLEAVING ENZYME 1,BETA-SITE APP CLEAVING ENZYME 1,MEMAPSIN-2, COMPND 6 MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2; COMPND 7 EC: 3.4.23.46; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BACE1, BACE, KIAA1149; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLOASE, D3R, BACE, LIGAND DOCKING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.RONDEAU,C.SHAO,H.YANG,S.K.BURLEY REVDAT 3 10-FEB-21 5QD2 1 JRNL REVDAT 2 30-DEC-20 5QD2 1 AUTHOR REVDAT 1 03-JUN-20 5QD2 0 JRNL AUTH C.D.PARKS,Z.GAIEB,M.CHIU,H.YANG,C.SHAO,W.P.WALTERS, JRNL AUTH 2 J.M.JANSEN,G.MCGAUGHEY,R.A.LEWIS,S.D.BEMBENEK,M.K.AMERIKS, JRNL AUTH 3 T.MIRZADEGAN,S.K.BURLEY,R.E.AMARO,M.K.GILSON JRNL TITL D3R GRAND CHALLENGE 4: BLIND PREDICTION OF PROTEIN-LIGAND JRNL TITL 2 POSES, AFFINITY RANKINGS, AND RELATIVE BINDING FREE JRNL TITL 3 ENERGIES. JRNL REF J.COMPUT.AIDED MOL.DES. V. 34 99 2020 JRNL REFN ESSN 1573-4951 JRNL PMID 31974851 JRNL DOI 10.1007/S10822-020-00289-Y REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 55796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9020 - 6.7796 0.94 2588 134 0.1766 0.1874 REMARK 3 2 6.7796 - 5.3837 0.99 2648 150 0.1697 0.2091 REMARK 3 3 5.3837 - 4.7039 0.99 2668 124 0.1393 0.1459 REMARK 3 4 4.7039 - 4.2741 1.00 2673 139 0.1200 0.1757 REMARK 3 5 4.2741 - 3.9680 1.00 2667 137 0.1348 0.1750 REMARK 3 6 3.9680 - 3.7341 1.00 2675 128 0.1390 0.1844 REMARK 3 7 3.7341 - 3.5472 1.00 2655 137 0.1565 0.2135 REMARK 3 8 3.5472 - 3.3928 1.00 2684 157 0.1599 0.2088 REMARK 3 9 3.3928 - 3.2622 1.00 2617 160 0.1633 0.2325 REMARK 3 10 3.2622 - 3.1497 1.00 2657 138 0.1660 0.2274 REMARK 3 11 3.1497 - 3.0512 1.00 2638 152 0.1679 0.2430 REMARK 3 12 3.0512 - 2.9640 1.00 2698 140 0.1658 0.2553 REMARK 3 13 2.9640 - 2.8860 1.00 2640 141 0.1727 0.2183 REMARK 3 14 2.8860 - 2.8156 1.00 2641 162 0.1730 0.2168 REMARK 3 15 2.8156 - 2.7516 1.00 2688 126 0.1747 0.2324 REMARK 3 16 2.7516 - 2.6930 1.00 2639 136 0.1754 0.2209 REMARK 3 17 2.6930 - 2.6392 1.00 2623 145 0.1797 0.2508 REMARK 3 18 2.6392 - 2.5894 1.00 2687 140 0.1866 0.2616 REMARK 3 19 2.5894 - 2.5431 1.00 2662 150 0.1851 0.2299 REMARK 3 20 2.5431 - 2.5000 0.95 2532 120 0.1934 0.2562 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9269 REMARK 3 ANGLE : 0.916 12601 REMARK 3 CHIRALITY : 0.057 1360 REMARK 3 PLANARITY : 0.005 1615 REMARK 3 DIHEDRAL : 15.305 5412 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8823 7.9349 27.7610 REMARK 3 T TENSOR REMARK 3 T11: 0.3970 T22: 0.2963 REMARK 3 T33: 0.2004 T12: -0.0116 REMARK 3 T13: -0.0809 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.1565 L22: 0.4516 REMARK 3 L33: 0.1346 L12: -0.2613 REMARK 3 L13: 0.0542 L23: -0.0887 REMARK 3 S TENSOR REMARK 3 S11: -0.1422 S12: -0.2686 S13: 0.3206 REMARK 3 S21: 0.3521 S22: 0.0084 S23: -0.2769 REMARK 3 S31: -0.2052 S32: 0.0035 S33: 0.0025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2996 10.3899 15.0759 REMARK 3 T TENSOR REMARK 3 T11: 0.3750 T22: 0.2933 REMARK 3 T33: 0.2388 T12: -0.0457 REMARK 3 T13: -0.0303 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 0.6715 L22: 0.9672 REMARK 3 L33: 0.7035 L12: -0.0466 REMARK 3 L13: 0.0273 L23: -0.1379 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.1743 S13: 0.1946 REMARK 3 S21: -0.0020 S22: -0.0270 S23: -0.1353 REMARK 3 S31: -0.2398 S32: 0.0838 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2456 -8.4252 20.0307 REMARK 3 T TENSOR REMARK 3 T11: 0.2299 T22: 0.2521 REMARK 3 T33: 0.2693 T12: 0.0397 REMARK 3 T13: -0.0041 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 0.4424 L22: 0.9330 REMARK 3 L33: 0.6173 L12: 0.1113 REMARK 3 L13: -0.2946 L23: -0.1543 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: 0.1828 S13: -0.1169 REMARK 3 S21: -0.0155 S22: 0.1249 S23: 0.2612 REMARK 3 S31: -0.0768 S32: -0.0614 S33: 0.0486 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 268 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7704 -4.8628 31.2134 REMARK 3 T TENSOR REMARK 3 T11: 0.3929 T22: 0.1388 REMARK 3 T33: 0.2226 T12: 0.1186 REMARK 3 T13: 0.0927 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 0.8936 L22: 0.4040 REMARK 3 L33: 0.4934 L12: 0.0545 REMARK 3 L13: 0.3976 L23: -0.2985 REMARK 3 S TENSOR REMARK 3 S11: -0.0760 S12: 0.1470 S13: 0.1189 REMARK 3 S21: 0.3266 S22: 0.1501 S23: 0.1742 REMARK 3 S31: -0.2788 S32: -0.1338 S33: 0.0648 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 318 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7507 -0.7741 23.3651 REMARK 3 T TENSOR REMARK 3 T11: 0.3192 T22: 0.1662 REMARK 3 T33: 0.2745 T12: 0.0660 REMARK 3 T13: 0.0122 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.6938 L22: 0.1866 REMARK 3 L33: 0.6990 L12: 0.2107 REMARK 3 L13: 0.7777 L23: 0.3037 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: 0.3114 S13: 0.3481 REMARK 3 S21: 0.0736 S22: 0.0081 S23: 0.1225 REMARK 3 S31: -0.2850 S32: 0.0615 S33: -0.0405 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1127 -13.0122 24.6434 REMARK 3 T TENSOR REMARK 3 T11: 0.2587 T22: 0.2219 REMARK 3 T33: 0.1821 T12: 0.0384 REMARK 3 T13: 0.0466 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.2312 L22: 0.3164 REMARK 3 L33: 0.2262 L12: -0.2925 REMARK 3 L13: 0.2052 L23: -0.2163 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.1594 S13: -0.1621 REMARK 3 S21: 0.0122 S22: 0.0618 S23: 0.1225 REMARK 3 S31: -0.1918 S32: -0.2257 S33: 0.0020 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3294 11.2066 -1.7362 REMARK 3 T TENSOR REMARK 3 T11: 0.3582 T22: 0.4249 REMARK 3 T33: 0.2910 T12: -0.0549 REMARK 3 T13: -0.0283 T23: 0.1148 REMARK 3 L TENSOR REMARK 3 L11: 0.4394 L22: 0.8745 REMARK 3 L33: 0.0504 L12: 0.3940 REMARK 3 L13: -0.0356 L23: 0.1360 REMARK 3 S TENSOR REMARK 3 S11: 0.4813 S12: -0.5916 S13: -0.3576 REMARK 3 S21: 0.3183 S22: -0.1779 S23: -0.1980 REMARK 3 S31: 0.1250 S32: -0.2775 S33: 0.0825 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1792 12.1526 -8.6787 REMARK 3 T TENSOR REMARK 3 T11: 0.2081 T22: 0.5153 REMARK 3 T33: 0.3055 T12: -0.0522 REMARK 3 T13: -0.0057 T23: 0.0540 REMARK 3 L TENSOR REMARK 3 L11: 0.3409 L22: 0.2729 REMARK 3 L33: 0.3659 L12: -0.2578 REMARK 3 L13: 0.1646 L23: 0.0250 REMARK 3 S TENSOR REMARK 3 S11: 0.1471 S12: -0.2967 S13: -0.3902 REMARK 3 S21: -0.0238 S22: -0.1127 S23: 0.2172 REMARK 3 S31: 0.1610 S32: -0.4949 S33: 0.1470 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0307 16.0305 -10.5733 REMARK 3 T TENSOR REMARK 3 T11: 0.2652 T22: 0.3170 REMARK 3 T33: 0.2615 T12: -0.0022 REMARK 3 T13: -0.0409 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 0.4531 L22: 0.1920 REMARK 3 L33: 0.7767 L12: 0.2862 REMARK 3 L13: -0.2007 L23: -0.0350 REMARK 3 S TENSOR REMARK 3 S11: 0.1336 S12: -0.2792 S13: -0.0973 REMARK 3 S21: 0.0540 S22: -0.0994 S23: 0.1099 REMARK 3 S31: -0.0024 S32: -0.3559 S33: -0.0010 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4710 6.8220 -27.1502 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.2376 REMARK 3 T33: 0.3673 T12: -0.0183 REMARK 3 T13: -0.0014 T23: -0.1200 REMARK 3 L TENSOR REMARK 3 L11: 0.6522 L22: 0.5570 REMARK 3 L33: 0.7783 L12: 0.4009 REMARK 3 L13: 0.0862 L23: -0.1400 REMARK 3 S TENSOR REMARK 3 S11: -0.0568 S12: 0.2667 S13: -0.4469 REMARK 3 S21: -0.1429 S22: 0.1562 S23: -0.1618 REMARK 3 S31: 0.0316 S32: 0.1045 S33: 0.0090 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 268 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4970 0.4418 -18.6179 REMARK 3 T TENSOR REMARK 3 T11: 0.2538 T22: 0.1035 REMARK 3 T33: 0.5824 T12: 0.0513 REMARK 3 T13: -0.0888 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.3570 L22: 0.4614 REMARK 3 L33: 0.5369 L12: -0.1892 REMARK 3 L13: 0.3550 L23: 0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.1513 S12: 0.1822 S13: -0.6152 REMARK 3 S21: -0.2084 S22: -0.1185 S23: -0.3261 REMARK 3 S31: 0.1978 S32: 0.2495 S33: 0.2188 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 318 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4320 8.2307 -18.7085 REMARK 3 T TENSOR REMARK 3 T11: 0.2331 T22: 0.1496 REMARK 3 T33: 0.3510 T12: -0.0382 REMARK 3 T13: -0.0458 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 0.2448 L22: 0.0724 REMARK 3 L33: 0.3794 L12: -0.1027 REMARK 3 L13: -0.2325 L23: 0.0573 REMARK 3 S TENSOR REMARK 3 S11: 0.1179 S12: -0.0605 S13: -0.2418 REMARK 3 S21: 0.1894 S22: -0.1051 S23: -0.1650 REMARK 3 S31: 0.0389 S32: -0.1660 S33: 0.0175 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 350 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0171 14.2411 -21.0096 REMARK 3 T TENSOR REMARK 3 T11: 0.2585 T22: 0.2644 REMARK 3 T33: 0.3520 T12: 0.0290 REMARK 3 T13: -0.0295 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.4171 L22: 0.2969 REMARK 3 L33: 0.0799 L12: 0.3546 REMARK 3 L13: 0.1879 L23: 0.1571 REMARK 3 S TENSOR REMARK 3 S11: 0.0530 S12: 0.2284 S13: -0.3907 REMARK 3 S21: -0.0651 S22: 0.0309 S23: -0.0745 REMARK 3 S31: -0.0061 S32: 0.0928 S33: -0.0007 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6858 -48.1678 35.5418 REMARK 3 T TENSOR REMARK 3 T11: 0.2276 T22: 0.3199 REMARK 3 T33: 0.2371 T12: -0.0223 REMARK 3 T13: -0.0267 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.2723 L22: 0.1493 REMARK 3 L33: 0.3257 L12: -0.1738 REMARK 3 L13: -0.0867 L23: -0.0562 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: 0.1994 S13: -0.0434 REMARK 3 S21: 0.0757 S22: -0.0654 S23: -0.0524 REMARK 3 S31: -0.1166 S32: -0.5829 S33: -0.0517 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7655 -54.5985 47.8665 REMARK 3 T TENSOR REMARK 3 T11: 0.3156 T22: 0.2971 REMARK 3 T33: 0.2992 T12: -0.0344 REMARK 3 T13: -0.0221 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 0.4545 L22: 0.5549 REMARK 3 L33: 0.7140 L12: 0.0453 REMARK 3 L13: -0.0045 L23: -0.0429 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: -0.1357 S13: -0.1466 REMARK 3 S21: 0.1201 S22: -0.0616 S23: -0.0132 REMARK 3 S31: 0.3214 S32: -0.1775 S33: 0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 136 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5072 -49.0032 30.9437 REMARK 3 T TENSOR REMARK 3 T11: 0.2459 T22: 0.2246 REMARK 3 T33: 0.2396 T12: 0.0062 REMARK 3 T13: -0.0460 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.2053 L22: 0.0847 REMARK 3 L33: 0.2100 L12: 0.1384 REMARK 3 L13: -0.2210 L23: -0.1379 REMARK 3 S TENSOR REMARK 3 S11: -0.0726 S12: 0.2311 S13: -0.0903 REMARK 3 S21: -0.0447 S22: 0.0241 S23: 0.0581 REMARK 3 S31: 0.2629 S32: -0.3005 S33: 0.0033 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 184 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1190 -32.1045 40.3684 REMARK 3 T TENSOR REMARK 3 T11: 0.2281 T22: 0.2723 REMARK 3 T33: 0.2537 T12: 0.0104 REMARK 3 T13: 0.0116 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.5717 L22: 0.5148 REMARK 3 L33: 0.3742 L12: -0.0638 REMARK 3 L13: -0.3533 L23: -0.2337 REMARK 3 S TENSOR REMARK 3 S11: 0.1548 S12: -0.0622 S13: -0.0262 REMARK 3 S21: 0.0208 S22: -0.1026 S23: -0.0547 REMARK 3 S31: -0.0433 S32: 0.0354 S33: 0.0001 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 253 THROUGH 327 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6577 -22.8393 41.4008 REMARK 3 T TENSOR REMARK 3 T11: 0.2345 T22: 0.2891 REMARK 3 T33: 0.2238 T12: 0.1050 REMARK 3 T13: 0.1647 T23: 0.1120 REMARK 3 L TENSOR REMARK 3 L11: 0.5080 L22: 0.9922 REMARK 3 L33: 1.2972 L12: 0.3468 REMARK 3 L13: 0.0819 L23: -0.1207 REMARK 3 S TENSOR REMARK 3 S11: 0.2245 S12: 0.0727 S13: 0.1865 REMARK 3 S21: 0.3320 S22: 0.1630 S23: 0.0254 REMARK 3 S31: -0.1088 S32: -0.3544 S33: 1.0423 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 328 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3924 -34.8131 32.8706 REMARK 3 T TENSOR REMARK 3 T11: 0.2008 T22: 0.2391 REMARK 3 T33: 0.2442 T12: 0.0504 REMARK 3 T13: 0.0082 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.1933 L22: 0.2668 REMARK 3 L33: 0.3453 L12: 0.1140 REMARK 3 L13: -0.2242 L23: -0.0439 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: -0.0326 S13: -0.0138 REMARK 3 S21: 0.0502 S22: -0.0609 S23: -0.0381 REMARK 3 S31: -0.0398 S32: 0.0183 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 5429 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : (CHAIN C AND (RESID -2 THROUGH 157 OR REMARK 3 RESID 169 THROUGH 385)) REMARK 3 ATOM PAIRS NUMBER : 5429 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5QD2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1001401795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55796 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.894 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN AT 19C BY VAPOUR REMARK 280 DIFFUSION IN HANGING DROPS FROM 1.0M AMMONIUM SULFATE. PROTEIN REMARK 280 STOCK WAS BACE MUT46B BATCH XII 8.45MG/ML IN 10MM TRIS-HCL PH REMARK 280 7.4, 25MM NACL, WITH A 5-FOLD EXCESS OF BMC017 ADDED FROM A 50MM REMARK 280 STOCK SOLUTION IN DMSO (2.0% DMSO IN DROP). CRYO- PROTECTANT WAS REMARK 280 1.2M AMMONIUM SULFATE, 25%(V/V)GLYCEROL, 2.0% DMSO, 1MM BMC017., REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.54500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -15 REMARK 465 PRO A -14 REMARK 465 ASP A -13 REMARK 465 GLU A -12 REMARK 465 GLU A -11 REMARK 465 PRO A -10 REMARK 465 GLU A -9 REMARK 465 GLU A -8 REMARK 465 PRO A -7 REMARK 465 GLY A -6 REMARK 465 ARG A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 GLY A 158 REMARK 465 PHE A 159 REMARK 465 PRO A 160 REMARK 465 LEU A 161 REMARK 465 ASN A 162 REMARK 465 GLN A 163 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 VAL A 166 REMARK 465 LEU A 167 REMARK 465 ALA A 168 REMARK 465 ILE A 386 REMARK 465 GLY B -15 REMARK 465 PRO B -14 REMARK 465 ASP B -13 REMARK 465 GLU B -12 REMARK 465 GLU B -11 REMARK 465 PRO B -10 REMARK 465 GLU B -9 REMARK 465 GLU B -8 REMARK 465 PRO B -7 REMARK 465 GLY B -6 REMARK 465 ARG B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 GLY B 158 REMARK 465 PHE B 159 REMARK 465 PRO B 160 REMARK 465 LEU B 161 REMARK 465 ASN B 162 REMARK 465 GLN B 163 REMARK 465 SER B 164 REMARK 465 GLU B 165 REMARK 465 VAL B 166 REMARK 465 LEU B 167 REMARK 465 ALA B 168 REMARK 465 ILE B 386 REMARK 465 GLY C -15 REMARK 465 PRO C -14 REMARK 465 ASP C -13 REMARK 465 GLU C -12 REMARK 465 GLU C -11 REMARK 465 PRO C -10 REMARK 465 GLU C -9 REMARK 465 GLU C -8 REMARK 465 PRO C -7 REMARK 465 GLY C -6 REMARK 465 ARG C -5 REMARK 465 ARG C -4 REMARK 465 GLY C -3 REMARK 465 GLY C 158 REMARK 465 PHE C 159 REMARK 465 PRO C 160 REMARK 465 LEU C 161 REMARK 465 ASN C 162 REMARK 465 GLN C 163 REMARK 465 SER C 164 REMARK 465 GLU C 165 REMARK 465 VAL C 166 REMARK 465 LEU C 167 REMARK 465 ILE C 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 25 O HOH C 501 1.81 REMARK 500 OD1 ASN C 209 O HOH C 502 2.12 REMARK 500 OE2 GLU C 290 O HOH C 503 2.14 REMARK 500 O HOH C 592 O HOH C 595 2.17 REMARK 500 OH TYR B 190 O HOH B 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 89 45.26 -97.46 REMARK 500 PHE A 108 -64.88 -102.28 REMARK 500 TRP A 197 -86.40 -135.77 REMARK 500 CYS A 359 52.64 -99.34 REMARK 500 HIS B 89 44.93 -99.09 REMARK 500 PHE B 108 -64.68 -101.24 REMARK 500 TRP B 197 -85.90 -134.21 REMARK 500 CYS B 359 46.71 -102.48 REMARK 500 HIS C 89 42.61 -96.79 REMARK 500 PHE C 108 -63.05 -100.71 REMARK 500 SER C 169 -46.96 -175.28 REMARK 500 TRP C 197 -87.04 -137.04 REMARK 500 GLN C 316 72.97 -116.55 REMARK 500 CYS C 359 52.45 -100.73 REMARK 500 ASP C 378 -167.47 -108.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E6J A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E6J B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E6J C 401 DBREF 5QD2 A -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD2 B -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD2 C -13 386 UNP P56817 BACE1_HUMAN 48 447 SEQADV 5QD2 GLY A -15 UNP P56817 EXPRESSION TAG SEQADV 5QD2 PRO A -14 UNP P56817 EXPRESSION TAG SEQADV 5QD2 GLY B -15 UNP P56817 EXPRESSION TAG SEQADV 5QD2 PRO B -14 UNP P56817 EXPRESSION TAG SEQADV 5QD2 GLY C -15 UNP P56817 EXPRESSION TAG SEQADV 5QD2 PRO C -14 UNP P56817 EXPRESSION TAG SEQRES 1 A 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 A 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 A 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 A 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 A 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 A 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 A 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 A 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 A 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 A 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 A 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 A 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 A 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 A 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 A 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 A 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 A 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 A 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 A 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 A 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 A 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 A 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 A 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 A 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 A 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 A 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 A 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 A 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 A 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 A 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 A 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 B 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 B 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 B 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 B 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 B 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 B 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 B 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 B 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 B 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 B 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 B 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 B 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 B 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 B 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 B 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 B 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 B 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 B 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 B 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 B 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 B 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 B 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 B 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 B 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 B 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 B 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 B 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 B 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 B 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 B 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 B 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 C 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 C 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 C 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 C 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 C 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 C 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 C 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 C 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 C 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 C 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 C 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 C 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 C 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 C 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 C 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 C 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 C 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 C 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 C 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 C 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 C 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 C 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 C 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 C 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 C 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 C 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 C 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 C 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 C 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 C 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 C 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE HET E6J A 401 40 HET E6J B 401 40 HET E6J C 401 40 HETNAM E6J (4S)-4-[(1R)-1-HYDROXY-2-({[3-(PROPAN-2-YL) HETNAM 2 E6J PHENYL]METHYL}AMINO)ETHYL]-19-(METHOXYMETHYL)-11,16- HETNAM 3 E6J DIOXA-3-AZATRICYCLO[15.3.1.1~6,10~]DOCOSA-1(21),6(22), HETNAM 4 E6J 7,9,17,19-HEXAEN-2-ONE FORMUL 4 E6J 3(C33 H42 N2 O5) FORMUL 7 HOH *286(H2 O) HELIX 1 AA1 SER A -2 VAL A 3 5 6 HELIX 2 AA2 GLN A 53 SER A 57 5 5 HELIX 3 AA3 TYR A 123 ALA A 127 5 5 HELIX 4 AA4 PRO A 135 THR A 144 1 10 HELIX 5 AA5 ASP A 180 SER A 182 5 3 HELIX 6 AA6 ASP A 216 TYR A 222 5 7 HELIX 7 AA7 LYS A 238 SER A 252 1 15 HELIX 8 AA8 PRO A 276 PHE A 280 5 5 HELIX 9 AA9 LEU A 301 TYR A 305 1 5 HELIX 10 AB1 GLY A 334 GLU A 339 1 6 HELIX 11 AB2 ARG A 347 ARG A 349 5 3 HELIX 12 AB3 ASP A 378 GLY A 383 5 6 HELIX 13 AB4 SER B -2 VAL B 3 5 6 HELIX 14 AB5 GLN B 53 SER B 57 5 5 HELIX 15 AB6 TYR B 123 ALA B 127 5 5 HELIX 16 AB7 PRO B 135 THR B 144 1 10 HELIX 17 AB8 ASP B 180 SER B 182 5 3 HELIX 18 AB9 ASP B 216 TYR B 222 5 7 HELIX 19 AC1 LYS B 238 SER B 252 1 15 HELIX 20 AC2 PRO B 276 PHE B 280 5 5 HELIX 21 AC3 LEU B 301 TYR B 305 1 5 HELIX 22 AC4 GLY B 334 GLU B 339 1 6 HELIX 23 AC5 ARG B 347 ARG B 349 5 3 HELIX 24 AC6 ASP B 378 GLY B 383 5 6 HELIX 25 AC7 SER C -2 VAL C 3 5 6 HELIX 26 AC8 GLN C 53 SER C 57 5 5 HELIX 27 AC9 TYR C 123 ALA C 127 5 5 HELIX 28 AD1 PRO C 135 THR C 144 1 10 HELIX 29 AD2 ASP C 180 SER C 182 5 3 HELIX 30 AD3 ASP C 216 ASN C 221 1 6 HELIX 31 AD4 LYS C 238 SER C 252 1 15 HELIX 32 AD5 PRO C 276 PHE C 280 5 5 HELIX 33 AD6 LEU C 301 TYR C 305 1 5 HELIX 34 AD7 GLY C 334 GLU C 339 1 6 HELIX 35 AD8 ARG C 347 ARG C 349 5 3 HELIX 36 AD9 ASP C 378 GLY C 383 1 6 SHEET 1 AA1 9 ARG A 61 PRO A 70 0 SHEET 2 AA1 9 LYS A 75 SER A 86 -1 O GLY A 78 N VAL A 67 SHEET 3 AA1 9 TYR A 14 VAL A 20 -1 N THR A 19 O SER A 86 SHEET 4 AA1 9 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 5 AA1 9 VAL A 170 ILE A 176 -1 O VAL A 170 N GLY A 8 SHEET 6 AA1 9 PHE A 150 CYS A 155 -1 N GLN A 153 O SER A 173 SHEET 7 AA1 9 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 8 AA1 9 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 9 AA1 9 TYR A 184 PRO A 192 -1 N THR A 191 O ILE A 352 SHEET 1 AA213 ARG A 61 PRO A 70 0 SHEET 2 AA213 LYS A 75 SER A 86 -1 O GLY A 78 N VAL A 67 SHEET 3 AA213 THR A 94 ASP A 106 -1 O ASP A 106 N LYS A 75 SHEET 4 AA213 PHE A 38 GLY A 41 1 N VAL A 40 O ILE A 102 SHEET 5 AA213 GLY A 117 GLY A 120 -1 O ILE A 118 N ALA A 39 SHEET 6 AA213 GLN A 25 ASP A 32 1 N LEU A 30 O GLY A 117 SHEET 7 AA213 TYR A 14 VAL A 20 -1 N VAL A 16 O ILE A 29 SHEET 8 AA213 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 9 AA213 VAL A 170 ILE A 176 -1 O VAL A 170 N GLY A 8 SHEET 10 AA213 PHE A 150 CYS A 155 -1 N GLN A 153 O SER A 173 SHEET 11 AA213 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 12 AA213 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 13 AA213 TYR A 184 PRO A 192 -1 N THR A 191 O ILE A 352 SHEET 1 AA3 5 GLN A 211 ASP A 212 0 SHEET 2 AA3 5 ILE A 203 ILE A 208 -1 N ILE A 208 O GLN A 211 SHEET 3 AA3 5 ILE A 283 MET A 288 -1 O SER A 284 N GLU A 207 SHEET 4 AA3 5 GLN A 294 ILE A 300 -1 O ILE A 300 N ILE A 283 SHEET 5 AA3 5 ALA A 369 VAL A 375 -1 O GLU A 371 N ARG A 297 SHEET 1 AA4 4 SER A 225 VAL A 227 0 SHEET 2 AA4 4 THR A 331 MET A 333 1 O MET A 333 N ILE A 226 SHEET 3 AA4 4 LEU A 234 PRO A 237 -1 N ARG A 235 O VAL A 332 SHEET 4 AA4 4 ILE A 324 SER A 327 1 O SER A 325 N LEU A 236 SHEET 1 AA5 3 VAL A 268 TRP A 270 0 SHEET 2 AA5 3 ASP A 318 PHE A 322 -1 O ASP A 318 N TRP A 270 SHEET 3 AA5 3 LEU A 306 VAL A 309 -1 N ARG A 307 O LYS A 321 SHEET 1 AA6 9 ARG B 61 PRO B 70 0 SHEET 2 AA6 9 LYS B 75 SER B 86 -1 O LEU B 80 N LYS B 65 SHEET 3 AA6 9 TYR B 14 VAL B 20 -1 N THR B 19 O SER B 86 SHEET 4 AA6 9 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 5 AA6 9 VAL B 170 ILE B 176 -1 O VAL B 170 N GLY B 8 SHEET 6 AA6 9 PHE B 150 CYS B 155 -1 N GLN B 153 O SER B 173 SHEET 7 AA6 9 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 8 AA6 9 ARG B 351 SER B 357 -1 O GLY B 353 N VAL B 344 SHEET 9 AA6 9 TYR B 184 PRO B 192 -1 N THR B 191 O ILE B 352 SHEET 1 AA713 ARG B 61 PRO B 70 0 SHEET 2 AA713 LYS B 75 SER B 86 -1 O LEU B 80 N LYS B 65 SHEET 3 AA713 VAL B 95 ASP B 106 -1 O ILE B 99 N GLY B 81 SHEET 4 AA713 PHE B 38 GLY B 41 1 N VAL B 40 O ILE B 102 SHEET 5 AA713 GLY B 117 GLY B 120 -1 O ILE B 118 N ALA B 39 SHEET 6 AA713 GLN B 25 ASP B 32 1 N LEU B 30 O LEU B 119 SHEET 7 AA713 TYR B 14 VAL B 20 -1 N VAL B 16 O ILE B 29 SHEET 8 AA713 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 9 AA713 VAL B 170 ILE B 176 -1 O VAL B 170 N GLY B 8 SHEET 10 AA713 PHE B 150 CYS B 155 -1 N GLN B 153 O SER B 173 SHEET 11 AA713 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 12 AA713 ARG B 351 SER B 357 -1 O GLY B 353 N VAL B 344 SHEET 13 AA713 TYR B 184 PRO B 192 -1 N THR B 191 O ILE B 352 SHEET 1 AA8 5 GLN B 211 ASP B 212 0 SHEET 2 AA8 5 ILE B 203 ILE B 208 -1 N ILE B 208 O GLN B 211 SHEET 3 AA8 5 ILE B 283 MET B 288 -1 O TYR B 286 N ARG B 205 SHEET 4 AA8 5 GLN B 294 ILE B 300 -1 O PHE B 296 N LEU B 287 SHEET 5 AA8 5 ALA B 369 VAL B 375 -1 O GLU B 371 N ARG B 297 SHEET 1 AA9 4 SER B 225 VAL B 227 0 SHEET 2 AA9 4 THR B 331 MET B 333 1 O MET B 333 N ILE B 226 SHEET 3 AA9 4 LEU B 234 PRO B 237 -1 N ARG B 235 O VAL B 332 SHEET 4 AA9 4 ILE B 324 SER B 327 1 O SER B 325 N LEU B 236 SHEET 1 AB1 3 VAL B 268 TRP B 270 0 SHEET 2 AB1 3 ASP B 318 PHE B 322 -1 O ASP B 318 N TRP B 270 SHEET 3 AB1 3 LEU B 306 VAL B 309 -1 N ARG B 307 O LYS B 321 SHEET 1 AB2 9 ARG C 61 PRO C 70 0 SHEET 2 AB2 9 LYS C 75 SER C 86 -1 O LEU C 80 N LYS C 65 SHEET 3 AB2 9 TYR C 14 VAL C 20 -1 N THR C 19 O SER C 86 SHEET 4 AB2 9 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 5 AB2 9 VAL C 170 ILE C 176 -1 O VAL C 170 N GLY C 8 SHEET 6 AB2 9 PHE C 150 CYS C 155 -1 N GLN C 153 O SER C 173 SHEET 7 AB2 9 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 8 AB2 9 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 9 AB2 9 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB313 ARG C 61 PRO C 70 0 SHEET 2 AB313 LYS C 75 SER C 86 -1 O LEU C 80 N LYS C 65 SHEET 3 AB313 VAL C 95 ASP C 106 -1 O ALA C 101 N GLU C 79 SHEET 4 AB313 PHE C 38 GLY C 41 1 N VAL C 40 O ILE C 102 SHEET 5 AB313 GLY C 117 GLY C 120 -1 O ILE C 118 N ALA C 39 SHEET 6 AB313 GLN C 25 ASP C 32 1 N LEU C 30 O LEU C 119 SHEET 7 AB313 TYR C 14 VAL C 20 -1 N VAL C 20 O GLN C 25 SHEET 8 AB313 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 9 AB313 VAL C 170 ILE C 176 -1 O VAL C 170 N GLY C 8 SHEET 10 AB313 PHE C 150 CYS C 155 -1 N GLN C 153 O SER C 173 SHEET 11 AB313 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 12 AB313 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 13 AB313 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB4 5 GLN C 211 ASP C 212 0 SHEET 2 AB4 5 ILE C 203 ILE C 208 -1 N ILE C 208 O GLN C 211 SHEET 3 AB4 5 ILE C 283 LEU C 287 -1 O SER C 284 N GLU C 207 SHEET 4 AB4 5 SER C 295 ILE C 300 -1 O ILE C 300 N ILE C 283 SHEET 5 AB4 5 ALA C 369 PHE C 374 -1 O PHE C 374 N SER C 295 SHEET 1 AB5 4 SER C 225 VAL C 227 0 SHEET 2 AB5 4 THR C 331 MET C 333 1 O MET C 333 N ILE C 226 SHEET 3 AB5 4 LEU C 234 PRO C 237 -1 N ARG C 235 O VAL C 332 SHEET 4 AB5 4 ILE C 324 SER C 327 1 O SER C 327 N LEU C 236 SHEET 1 AB6 3 VAL C 268 GLN C 271 0 SHEET 2 AB6 3 ASP C 317 PHE C 322 -1 O TYR C 320 N VAL C 268 SHEET 3 AB6 3 LEU C 306 VAL C 309 -1 N ARG C 307 O LYS C 321 SSBOND 1 CYS A 155 CYS A 359 1555 1555 2.07 SSBOND 2 CYS A 217 CYS A 382 1555 1555 2.06 SSBOND 3 CYS A 269 CYS A 319 1555 1555 2.06 SSBOND 4 CYS B 155 CYS B 359 1555 1555 2.07 SSBOND 5 CYS B 217 CYS B 382 1555 1555 2.08 SSBOND 6 CYS B 269 CYS B 319 1555 1555 2.04 SSBOND 7 CYS C 155 CYS C 359 1555 1555 2.06 SSBOND 8 CYS C 217 CYS C 382 1555 1555 2.06 SSBOND 9 CYS C 269 CYS C 319 1555 1555 2.05 CISPEP 1 SER A 22 PRO A 23 0 -2.64 CISPEP 2 ARG A 128 PRO A 129 0 0.34 CISPEP 3 TYR A 222 ASP A 223 0 2.80 CISPEP 4 GLY A 372 PRO A 373 0 -1.88 CISPEP 5 SER B 22 PRO B 23 0 -3.58 CISPEP 6 ARG B 128 PRO B 129 0 -0.44 CISPEP 7 TYR B 222 ASP B 223 0 4.57 CISPEP 8 GLY B 372 PRO B 373 0 -2.75 CISPEP 9 SER C 22 PRO C 23 0 -4.23 CISPEP 10 ARG C 128 PRO C 129 0 -1.40 CISPEP 11 TYR C 222 ASP C 223 0 4.17 CISPEP 12 GLY C 372 PRO C 373 0 1.56 SITE 1 AC1 19 GLN A 12 GLY A 13 LEU A 30 ASP A 32 SITE 2 AC1 19 GLY A 34 VAL A 69 PRO A 70 TYR A 71 SITE 3 AC1 19 THR A 72 GLN A 73 PHE A 108 ILE A 110 SITE 4 AC1 19 TRP A 115 ASP A 228 GLY A 230 THR A 232 SITE 5 AC1 19 ARG A 235 HOH A 511 HOH A 554 SITE 1 AC2 20 GLN B 12 GLY B 13 LEU B 30 ASP B 32 SITE 2 AC2 20 GLY B 34 SER B 35 PRO B 70 TYR B 71 SITE 3 AC2 20 THR B 72 GLN B 73 PHE B 108 ILE B 110 SITE 4 AC2 20 TRP B 115 TYR B 198 ASP B 228 GLY B 230 SITE 5 AC2 20 THR B 232 ARG B 235 SER B 325 HOH B 518 SITE 1 AC3 20 GLY C 11 GLN C 12 GLY C 13 LEU C 30 SITE 2 AC3 20 ASP C 32 GLY C 34 SER C 35 VAL C 69 SITE 3 AC3 20 PRO C 70 TYR C 71 THR C 72 GLN C 73 SITE 4 AC3 20 ILE C 110 TRP C 115 ILE C 126 ASP C 228 SITE 5 AC3 20 GLY C 230 THR C 232 ARG C 235 HOH C 555 CRYST1 82.077 103.090 100.342 90.00 104.02 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012184 0.000000 0.003042 0.00000 SCALE2 0.000000 0.009700 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010272 0.00000