data_5QU2 # _entry.id 5QU2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5QU2 pdb_00005qu2 10.2210/pdb5qu2/pdb WWPDB D_1001402407 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-02-12 2 'Structure model' 2 0 2020-02-26 3 'Structure model' 2 1 2021-05-12 4 'Structure model' 2 2 2021-06-30 5 'Structure model' 2 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' 'Polymer sequence' 7 2 'Structure model' 'Source and taxonomy' 8 2 'Structure model' 'Structure summary' 9 3 'Structure model' 'Derived calculations' 10 3 'Structure model' 'Structure summary' 11 4 'Structure model' 'Database references' 12 5 'Structure model' 'Data collection' 13 5 'Structure model' 'Database references' 14 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' entity 4 2 'Structure model' entity_poly 5 2 'Structure model' entity_poly_seq 6 2 'Structure model' pdbx_entity_nonpoly 7 2 'Structure model' pdbx_entity_src_syn 8 2 'Structure model' pdbx_nonpoly_scheme 9 2 'Structure model' pdbx_poly_seq_scheme 10 2 'Structure model' pdbx_struct_assembly_gen 11 2 'Structure model' pdbx_struct_special_symmetry 12 2 'Structure model' pdbx_validate_close_contact 13 2 'Structure model' pdbx_validate_polymer_linkage 14 2 'Structure model' struct_asym 15 2 'Structure model' struct_conn 16 2 'Structure model' struct_ref_seq 17 2 'Structure model' struct_site 18 2 'Structure model' struct_site_gen 19 3 'Structure model' pdbx_deposit_group 20 3 'Structure model' struct_conn 21 4 'Structure model' citation 22 4 'Structure model' citation_author 23 5 'Structure model' chem_comp_atom 24 5 'Structure model' chem_comp_bond 25 5 'Structure model' citation 26 5 'Structure model' database_2 27 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.group_PDB' 10 2 'Structure model' '_atom_site.label_alt_id' 11 2 'Structure model' '_atom_site.label_asym_id' 12 2 'Structure model' '_atom_site.label_atom_id' 13 2 'Structure model' '_atom_site.label_comp_id' 14 2 'Structure model' '_atom_site.label_entity_id' 15 2 'Structure model' '_atom_site.label_seq_id' 16 2 'Structure model' '_atom_site.occupancy' 17 2 'Structure model' '_atom_site.type_symbol' 18 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 19 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 20 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 21 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 22 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 23 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 24 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 25 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 26 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 27 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 28 2 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id' 29 2 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 30 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 31 2 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 32 2 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 33 2 'Structure model' '_atom_site_anisotrop.type_symbol' 34 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 35 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 36 2 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 37 2 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 38 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 39 2 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 40 2 'Structure model' '_struct_ref_seq.db_align_end' 41 2 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 42 2 'Structure model' '_struct_ref_seq.seq_align_end' 43 3 'Structure model' '_pdbx_deposit_group.group_description' 44 3 'Structure model' '_pdbx_deposit_group.group_type' 45 3 'Structure model' '_struct_conn.pdbx_dist_value' 46 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 47 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 48 3 'Structure model' '_struct_conn.pdbx_value_order' 49 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 50 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 51 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 52 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 53 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 54 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 55 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 56 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 57 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 58 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 59 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 60 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 61 4 'Structure model' '_citation.country' 62 4 'Structure model' '_citation.journal_abbrev' 63 4 'Structure model' '_citation.journal_id_ASTM' 64 4 'Structure model' '_citation.journal_id_CSD' 65 4 'Structure model' '_citation.journal_id_ISSN' 66 4 'Structure model' '_citation.journal_volume' 67 4 'Structure model' '_citation.page_first' 68 4 'Structure model' '_citation.page_last' 69 4 'Structure model' '_citation.pdbx_database_id_DOI' 70 4 'Structure model' '_citation.pdbx_database_id_PubMed' 71 4 'Structure model' '_citation.title' 72 4 'Structure model' '_citation.year' 73 5 'Structure model' '_citation.title' 74 5 'Structure model' '_database_2.pdbx_DOI' 75 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 5QU2 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2019-12-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.pdbx_ordinal 1 _audit_author.name 'Rudolph, M.G.' # _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.title ;Small molecule AX-024 reduces T cell proliferation independently of CD3ε/Nck1 interaction, which is governed by a domain swap in the Nck1-SH3.1 domain. ; _citation.year 2020 _citation.journal_volume 295 _citation.page_first 7849 _citation.page_last 7864 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 1083-351X _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 32317279 _citation.pdbx_database_id_DOI 10.1074/jbc.RA120.012788 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Richter, K.' 1 ? primary 'Rufer, A.C.' 2 ? primary 'Muller, M.' 3 ? primary 'Burger, D.' 4 ? primary 'Casagrande, F.' 5 ? primary 'Grossenbacher, T.' 6 ? primary 'Huber, S.' 7 ? primary 'Hug, M.N.' 8 ? primary 'Koldewey, P.' 9 0000-0003-3945-1063 primary ;D'Osualdo, A. ; 10 ? primary 'Schlatter, D.' 11 ? primary 'Stoll, T.' 12 ? primary 'Rudolph, M.G.' 13 0000-0003-0447-1101 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytoplasmic protein NCK1' 7202.144 2 ? ? ? ? 2 polymer syn ACE-PRO-PRO-PRO-VAL-PRO-ASN-PRO-ASP-TYR-NH2 1019.130 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 173 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NCK adaptor protein 1,Nck-1,SH2/SH3 adaptor protein NCK-alpha' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no SMAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERK SMAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERK A,B ? 2 'polypeptide(L)' no yes '(ACE)PPPVPNPDY(NH2)' XPPPVPNPDYX D,E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 GLU n 1 5 GLU n 1 6 VAL n 1 7 VAL n 1 8 VAL n 1 9 VAL n 1 10 ALA n 1 11 LYS n 1 12 PHE n 1 13 ASP n 1 14 TYR n 1 15 VAL n 1 16 ALA n 1 17 GLN n 1 18 GLN n 1 19 GLU n 1 20 GLN n 1 21 GLU n 1 22 LEU n 1 23 ASP n 1 24 ILE n 1 25 LYS n 1 26 LYS n 1 27 ASN n 1 28 GLU n 1 29 ARG n 1 30 LEU n 1 31 TRP n 1 32 LEU n 1 33 LEU n 1 34 ASP n 1 35 ASP n 1 36 SER n 1 37 LYS n 1 38 SER n 1 39 TRP n 1 40 TRP n 1 41 ARG n 1 42 VAL n 1 43 ARG n 1 44 ASN n 1 45 SER n 1 46 MET n 1 47 ASN n 1 48 LYS n 1 49 THR n 1 50 GLY n 1 51 PHE n 1 52 VAL n 1 53 PRO n 1 54 SER n 1 55 ASN n 1 56 TYR n 1 57 VAL n 1 58 GLU n 1 59 ARG n 1 60 LYS n 2 1 ACE n 2 2 PRO n 2 3 PRO n 2 4 PRO n 2 5 VAL n 2 6 PRO n 2 7 ASN n 2 8 PRO n 2 9 ASP n 2 10 TYR n 2 11 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NCK1, NCK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET28a(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 11 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 MET 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 GLU 4 1 ? ? ? A . n A 1 5 GLU 5 2 2 GLU GLU A . n A 1 6 VAL 6 3 3 VAL VAL A . n A 1 7 VAL 7 4 4 VAL VAL A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 VAL 9 6 6 VAL VAL A . n A 1 10 ALA 10 7 7 ALA ALA A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 PHE 12 9 9 PHE PHE A . n A 1 13 ASP 13 10 10 ASP ASP A . n A 1 14 TYR 14 11 11 TYR TYR A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 GLN 18 15 15 GLN GLN A . n A 1 19 GLU 19 16 16 GLU GLU A . n A 1 20 GLN 20 17 17 GLN GLN A . n A 1 21 GLU 21 18 18 GLU GLU A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 ASP 23 20 20 ASP ASP A . n A 1 24 ILE 24 21 21 ILE ILE A . n A 1 25 LYS 25 22 22 LYS LYS A . n A 1 26 LYS 26 23 23 LYS LYS A . n A 1 27 ASN 27 24 24 ASN ASN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 TRP 31 28 28 TRP TRP A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 LEU 33 30 30 LEU LEU A . n A 1 34 ASP 34 31 31 ASP ASP A . n A 1 35 ASP 35 32 32 ASP ASP A . n A 1 36 SER 36 33 33 SER SER A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 SER 38 35 35 SER SER A . n A 1 39 TRP 39 36 36 TRP TRP A . n A 1 40 TRP 40 37 37 TRP TRP A . n A 1 41 ARG 41 38 38 ARG ARG A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 ARG 43 40 40 ARG ARG A . n A 1 44 ASN 44 41 41 ASN ASN A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 MET 46 43 43 MET MET A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 LYS 48 45 45 LYS LYS A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 GLY 50 47 47 GLY GLY A . n A 1 51 PHE 51 48 48 PHE PHE A . n A 1 52 VAL 52 49 49 VAL VAL A . n A 1 53 PRO 53 50 50 PRO PRO A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 ASN 55 52 52 ASN ASN A . n A 1 56 TYR 56 53 53 TYR TYR A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 ARG 59 56 56 ARG ARG A . n A 1 60 LYS 60 57 57 LYS LYS A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 MET 2 -1 ? ? ? B . n B 1 3 ALA 3 0 ? ? ? B . n B 1 4 GLU 4 1 1 GLU GLU B . n B 1 5 GLU 5 2 2 GLU GLU B . n B 1 6 VAL 6 3 3 VAL VAL B . n B 1 7 VAL 7 4 4 VAL VAL B . n B 1 8 VAL 8 5 5 VAL VAL B . n B 1 9 VAL 9 6 6 VAL VAL B . n B 1 10 ALA 10 7 7 ALA ALA B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 PHE 12 9 9 PHE PHE B . n B 1 13 ASP 13 10 10 ASP ASP B . n B 1 14 TYR 14 11 11 TYR TYR B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ALA 16 13 13 ALA ALA B . n B 1 17 GLN 17 14 14 GLN GLN B . n B 1 18 GLN 18 15 15 GLN GLN B . n B 1 19 GLU 19 16 16 GLU GLU B . n B 1 20 GLN 20 17 17 GLN GLN B . n B 1 21 GLU 21 18 18 GLU GLU B . n B 1 22 LEU 22 19 19 LEU LEU B . n B 1 23 ASP 23 20 20 ASP ASP B . n B 1 24 ILE 24 21 21 ILE ILE B . n B 1 25 LYS 25 22 22 LYS LYS B . n B 1 26 LYS 26 23 23 LYS LYS B . n B 1 27 ASN 27 24 24 ASN ASN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ARG 29 26 26 ARG ARG B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 TRP 31 28 28 TRP TRP B . n B 1 32 LEU 32 29 29 LEU LEU B . n B 1 33 LEU 33 30 30 LEU LEU B . n B 1 34 ASP 34 31 31 ASP ASP B . n B 1 35 ASP 35 32 32 ASP ASP B . n B 1 36 SER 36 33 33 SER SER B . n B 1 37 LYS 37 34 34 LYS LYS B . n B 1 38 SER 38 35 35 SER SER B . n B 1 39 TRP 39 36 36 TRP TRP B . n B 1 40 TRP 40 37 37 TRP TRP B . n B 1 41 ARG 41 38 38 ARG ARG B . n B 1 42 VAL 42 39 39 VAL VAL B . n B 1 43 ARG 43 40 40 ARG ARG B . n B 1 44 ASN 44 41 41 ASN ASN B . n B 1 45 SER 45 42 42 SER SER B . n B 1 46 MET 46 43 43 MET MET B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 LYS 48 45 45 LYS LYS B . n B 1 49 THR 49 46 46 THR THR B . n B 1 50 GLY 50 47 47 GLY GLY B . n B 1 51 PHE 51 48 48 PHE PHE B . n B 1 52 VAL 52 49 49 VAL VAL B . n B 1 53 PRO 53 50 50 PRO PRO B . n B 1 54 SER 54 51 51 SER SER B . n B 1 55 ASN 55 52 52 ASN ASN B . n B 1 56 TYR 56 53 53 TYR TYR B . n B 1 57 VAL 57 54 54 VAL VAL B . n B 1 58 GLU 58 55 55 GLU GLU B . n B 1 59 ARG 59 56 56 ARG ARG B . n B 1 60 LYS 60 57 ? ? ? B . n C 2 1 ACE 1 179 179 ACE ACE D . n C 2 2 PRO 2 180 180 PRO PRO D . n C 2 3 PRO 3 181 181 PRO PRO D . n C 2 4 PRO 4 182 182 PRO PRO D . n C 2 5 VAL 5 183 183 VAL VAL D . n C 2 6 PRO 6 184 184 PRO PRO D . n C 2 7 ASN 7 185 185 ASN ASN D . n C 2 8 PRO 8 186 186 PRO PRO D . n C 2 9 ASP 9 187 187 ASP ASP D . n C 2 10 TYR 10 188 188 TYR TYR D . n C 2 11 NH2 11 189 189 NH2 NH2 D . n D 2 1 ACE 1 179 179 ACE ACE E . n D 2 2 PRO 2 180 180 PRO PRO E . n D 2 3 PRO 3 181 181 PRO PRO E . n D 2 4 PRO 4 182 182 PRO PRO E . n D 2 5 VAL 5 183 183 VAL VAL E . n D 2 6 PRO 6 184 184 PRO PRO E . n D 2 7 ASN 7 185 185 ASN ASN E . n D 2 8 PRO 8 186 186 PRO PRO E . n D 2 9 ASP 9 187 187 ASP ASP E . n D 2 10 TYR 10 188 188 TYR TYR E . n D 2 11 NH2 11 189 189 NH2 NH2 E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 1 101 1 SO4 SO4 A . F 3 SO4 1 102 2 SO4 SO4 A . G 3 SO4 1 201 3 SO4 SO4 D . H 4 HOH 1 201 44 HOH HOH A . H 4 HOH 2 202 115 HOH HOH A . H 4 HOH 3 203 149 HOH HOH A . H 4 HOH 4 204 105 HOH HOH A . H 4 HOH 5 205 31 HOH HOH A . H 4 HOH 6 206 50 HOH HOH A . H 4 HOH 7 207 132 HOH HOH A . H 4 HOH 8 208 39 HOH HOH A . H 4 HOH 9 209 17 HOH HOH A . H 4 HOH 10 210 140 HOH HOH A . H 4 HOH 11 211 5 HOH HOH A . H 4 HOH 12 212 151 HOH HOH A . H 4 HOH 13 213 153 HOH HOH A . H 4 HOH 14 214 7 HOH HOH A . H 4 HOH 15 215 159 HOH HOH A . H 4 HOH 16 216 130 HOH HOH A . H 4 HOH 17 217 79 HOH HOH A . H 4 HOH 18 218 2 HOH HOH A . H 4 HOH 19 219 20 HOH HOH A . H 4 HOH 20 220 1 HOH HOH A . H 4 HOH 21 221 27 HOH HOH A . H 4 HOH 22 222 145 HOH HOH A . H 4 HOH 23 223 86 HOH HOH A . H 4 HOH 24 224 22 HOH HOH A . H 4 HOH 25 225 84 HOH HOH A . H 4 HOH 26 226 3 HOH HOH A . H 4 HOH 27 227 10 HOH HOH A . H 4 HOH 28 228 14 HOH HOH A . H 4 HOH 29 229 42 HOH HOH A . H 4 HOH 30 230 34 HOH HOH A . H 4 HOH 31 231 96 HOH HOH A . H 4 HOH 32 232 119 HOH HOH A . H 4 HOH 33 233 77 HOH HOH A . H 4 HOH 34 234 83 HOH HOH A . H 4 HOH 35 235 41 HOH HOH A . H 4 HOH 36 236 66 HOH HOH A . H 4 HOH 37 237 160 HOH HOH A . H 4 HOH 38 238 108 HOH HOH A . H 4 HOH 39 239 148 HOH HOH A . H 4 HOH 40 240 109 HOH HOH A . H 4 HOH 41 241 63 HOH HOH A . H 4 HOH 42 242 28 HOH HOH A . H 4 HOH 43 243 21 HOH HOH A . H 4 HOH 44 244 144 HOH HOH A . H 4 HOH 45 245 37 HOH HOH A . H 4 HOH 46 246 36 HOH HOH A . H 4 HOH 47 247 165 HOH HOH A . H 4 HOH 48 248 138 HOH HOH A . H 4 HOH 49 249 104 HOH HOH A . H 4 HOH 50 250 94 HOH HOH A . H 4 HOH 51 251 76 HOH HOH A . H 4 HOH 52 252 67 HOH HOH A . H 4 HOH 53 253 152 HOH HOH A . H 4 HOH 54 254 26 HOH HOH A . H 4 HOH 55 255 154 HOH HOH A . H 4 HOH 56 256 64 HOH HOH A . H 4 HOH 57 257 173 HOH HOH A . H 4 HOH 58 258 12 HOH HOH A . H 4 HOH 59 259 158 HOH HOH A . H 4 HOH 60 260 110 HOH HOH A . H 4 HOH 61 261 69 HOH HOH A . H 4 HOH 62 262 40 HOH HOH A . H 4 HOH 63 263 161 HOH HOH A . H 4 HOH 64 264 89 HOH HOH A . H 4 HOH 65 265 136 HOH HOH A . H 4 HOH 66 266 135 HOH HOH A . H 4 HOH 67 267 103 HOH HOH A . H 4 HOH 68 268 68 HOH HOH A . H 4 HOH 69 269 107 HOH HOH A . H 4 HOH 70 270 58 HOH HOH A . H 4 HOH 71 271 99 HOH HOH A . H 4 HOH 72 272 122 HOH HOH A . H 4 HOH 73 273 93 HOH HOH A . H 4 HOH 74 274 91 HOH HOH A . H 4 HOH 75 275 123 HOH HOH A . H 4 HOH 76 276 134 HOH HOH A . H 4 HOH 77 277 61 HOH HOH A . H 4 HOH 78 278 95 HOH HOH A . H 4 HOH 79 279 87 HOH HOH A . I 4 HOH 1 101 168 HOH HOH B . I 4 HOH 2 102 106 HOH HOH B . I 4 HOH 3 103 163 HOH HOH B . I 4 HOH 4 104 112 HOH HOH B . I 4 HOH 5 105 78 HOH HOH B . I 4 HOH 6 106 19 HOH HOH B . I 4 HOH 7 107 155 HOH HOH B . I 4 HOH 8 108 45 HOH HOH B . I 4 HOH 9 109 56 HOH HOH B . I 4 HOH 10 110 120 HOH HOH B . I 4 HOH 11 111 38 HOH HOH B . I 4 HOH 12 112 116 HOH HOH B . I 4 HOH 13 113 16 HOH HOH B . I 4 HOH 14 114 128 HOH HOH B . I 4 HOH 15 115 143 HOH HOH B . I 4 HOH 16 116 8 HOH HOH B . I 4 HOH 17 117 162 HOH HOH B . I 4 HOH 18 118 30 HOH HOH B . I 4 HOH 19 119 51 HOH HOH B . I 4 HOH 20 120 80 HOH HOH B . I 4 HOH 21 121 4 HOH HOH B . I 4 HOH 22 122 43 HOH HOH B . I 4 HOH 23 123 147 HOH HOH B . I 4 HOH 24 124 32 HOH HOH B . I 4 HOH 25 125 81 HOH HOH B . I 4 HOH 26 126 13 HOH HOH B . I 4 HOH 27 127 65 HOH HOH B . I 4 HOH 28 128 72 HOH HOH B . I 4 HOH 29 129 169 HOH HOH B . I 4 HOH 30 130 29 HOH HOH B . I 4 HOH 31 131 25 HOH HOH B . I 4 HOH 32 132 53 HOH HOH B . I 4 HOH 33 133 73 HOH HOH B . I 4 HOH 34 134 11 HOH HOH B . I 4 HOH 35 135 75 HOH HOH B . I 4 HOH 36 136 52 HOH HOH B . I 4 HOH 37 137 48 HOH HOH B . I 4 HOH 38 138 6 HOH HOH B . I 4 HOH 39 139 35 HOH HOH B . I 4 HOH 40 140 15 HOH HOH B . I 4 HOH 41 141 170 HOH HOH B . I 4 HOH 42 142 125 HOH HOH B . I 4 HOH 43 143 54 HOH HOH B . I 4 HOH 44 144 60 HOH HOH B . I 4 HOH 45 145 70 HOH HOH B . I 4 HOH 46 146 126 HOH HOH B . I 4 HOH 47 147 33 HOH HOH B . I 4 HOH 48 148 46 HOH HOH B . I 4 HOH 49 149 131 HOH HOH B . I 4 HOH 50 150 62 HOH HOH B . I 4 HOH 51 151 171 HOH HOH B . I 4 HOH 52 152 57 HOH HOH B . I 4 HOH 53 153 124 HOH HOH B . I 4 HOH 54 154 111 HOH HOH B . I 4 HOH 55 155 102 HOH HOH B . I 4 HOH 56 156 24 HOH HOH B . I 4 HOH 57 157 71 HOH HOH B . I 4 HOH 58 158 121 HOH HOH B . I 4 HOH 59 159 47 HOH HOH B . I 4 HOH 60 160 127 HOH HOH B . I 4 HOH 61 161 118 HOH HOH B . I 4 HOH 62 162 92 HOH HOH B . I 4 HOH 63 163 55 HOH HOH B . I 4 HOH 64 164 167 HOH HOH B . I 4 HOH 65 165 18 HOH HOH B . I 4 HOH 66 166 137 HOH HOH B . I 4 HOH 67 167 117 HOH HOH B . I 4 HOH 68 168 157 HOH HOH B . I 4 HOH 69 169 88 HOH HOH B . I 4 HOH 70 170 156 HOH HOH B . I 4 HOH 71 171 97 HOH HOH B . I 4 HOH 72 172 85 HOH HOH B . I 4 HOH 73 173 113 HOH HOH B . I 4 HOH 74 174 142 HOH HOH B . I 4 HOH 75 175 164 HOH HOH B . I 4 HOH 76 176 82 HOH HOH B . J 4 HOH 1 301 101 HOH HOH D . J 4 HOH 2 302 139 HOH HOH D . J 4 HOH 3 303 172 HOH HOH D . J 4 HOH 4 304 49 HOH HOH D . J 4 HOH 5 305 146 HOH HOH D . J 4 HOH 6 306 90 HOH HOH D . J 4 HOH 7 307 74 HOH HOH D . J 4 HOH 8 308 98 HOH HOH D . J 4 HOH 9 309 114 HOH HOH D . J 4 HOH 10 310 59 HOH HOH D . J 4 HOH 11 311 100 HOH HOH D . K 4 HOH 1 301 9 HOH HOH E . K 4 HOH 2 302 23 HOH HOH E . K 4 HOH 3 303 141 HOH HOH E . K 4 HOH 4 304 133 HOH HOH E . K 4 HOH 5 305 166 HOH HOH E . K 4 HOH 6 306 150 HOH HOH E . K 4 HOH 7 307 129 HOH HOH E . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 REFMAC 5.8.0238 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.24 'Sep. 1, 2017' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 XSCALE . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _cell.entry_id 5QU2 _cell.length_a 50.650 _cell.length_b 63.340 _cell.length_c 99.680 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QU2 _symmetry.space_group_name_H-M 'I 21 21 21' _symmetry.Int_Tables_number 24 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.crystals_number 1 _exptl.entry_id 5QU2 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.39 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1 M Bis-Tris/HCl pH 6.5, 2 M (NH4)2SO4' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2019-05-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00005 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_wavelength_list 1.00005 _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5QU2 _reflns.pdbx_redundancy 6.57 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.890 _reflns.d_resolution_high 1.050 _reflns.number_obs 67794 _reflns.number_all ? _reflns.percent_possible_obs 90.500 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.610 _reflns.B_iso_Wilson_estimate 18.642 _reflns.pdbx_Rrim_I_all 0.075 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_CC_half 0.999 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 445579 _reflns.pdbx_scaling_rejects 407 _reflns.pdbx_chi_squared 0.792 _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.050 1.080 21739 ? 3679 ? 4.559 0.320 ? ? 5.909 ? ? 5486 ? ? ? ? ? 67.100 4.991 ? 0.225 1 2 1.080 1.110 29984 ? 4417 ? 7.161 0.270 ? ? 6.788 ? ? 5362 ? ? ? ? ? 82.400 7.750 ? 0.341 1 3 1.110 1.140 29641 ? 4384 ? 3.540 0.570 ? ? 6.761 ? ? 5167 ? ? ? ? ? 84.800 3.835 ? 0.488 1 4 1.140 1.170 27982 ? 4416 ? 2.465 0.800 ? ? 6.337 ? ? 5095 ? ? ? ? ? 86.700 2.685 ? 0.599 1 5 1.170 1.210 29172 ? 4281 ? 1.968 1.080 ? ? 6.814 ? ? 4894 ? ? ? ? ? 87.500 2.130 ? 0.702 1 6 1.210 1.260 28799 ? 4218 ? 1.470 1.430 ? ? 6.828 ? ? 4728 ? ? ? ? ? 89.200 1.590 ? 0.780 1 7 1.260 1.300 27745 ? 4190 ? 1.180 1.830 ? ? 6.622 ? ? 4597 ? ? ? ? ? 91.100 1.280 ? 0.826 1 8 1.300 1.360 26262 ? 4138 ? 0.963 2.080 ? ? 6.347 ? ? 4420 ? ? ? ? ? 93.600 1.049 ? 0.899 1 9 1.360 1.420 27702 ? 4020 ? 0.614 3.460 ? ? 6.891 ? ? 4239 ? ? ? ? ? 94.800 0.663 ? 0.952 1 10 1.420 1.480 26716 ? 3872 ? 0.451 4.620 ? ? 6.900 ? ? 4056 ? ? ? ? ? 95.500 0.487 ? 0.971 1 11 1.480 1.570 25272 ? 3731 ? 0.295 6.700 ? ? 6.774 ? ? 3879 ? ? ? ? ? 96.200 0.319 ? 0.985 1 12 1.570 1.660 22617 ? 3539 ? 0.197 9.160 ? ? 6.391 ? ? 3663 ? ? ? ? ? 96.600 0.215 ? 0.991 1 13 1.660 1.770 23687 ? 3351 ? 0.139 13.400 ? ? 7.069 ? ? 3449 ? ? ? ? ? 97.200 0.150 ? 0.995 1 14 1.770 1.920 21146 ? 3125 ? 0.094 18.540 ? ? 6.767 ? ? 3220 ? ? ? ? ? 97.000 0.102 ? 0.997 1 15 1.920 2.100 18628 ? 2896 ? 0.069 24.780 ? ? 6.432 ? ? 2967 ? ? ? ? ? 97.600 0.075 ? 0.997 1 16 2.100 2.350 15265 ? 2656 ? 0.053 29.190 ? ? 5.747 ? ? 2715 ? ? ? ? ? 97.800 0.059 ? 0.997 1 17 2.350 2.710 15583 ? 2353 ? 0.045 35.830 ? ? 6.623 ? ? 2392 ? ? ? ? ? 98.400 0.049 ? 0.998 1 18 2.710 3.320 12675 ? 2027 ? 0.037 40.640 ? ? 6.253 ? ? 2053 ? ? ? ? ? 98.700 0.040 ? 0.999 1 19 3.320 4.700 9028 ? 1578 ? 0.032 42.100 ? ? 5.721 ? ? 1607 ? ? ? ? ? 98.200 0.035 ? 0.998 1 20 4.700 49.890 5936 ? 923 ? 0.030 45.590 ? ? 6.431 ? ? 943 ? ? ? ? ? 97.900 0.032 ? 0.999 # _refine.entry_id 5QU2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.0400 _refine.ls_d_res_low 49.8900 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 57.8400 _refine.ls_number_reflns_obs 41808 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1679 _refine.ls_R_factor_R_work 0.1659 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2051 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 2156 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.7910 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.2000 _refine.aniso_B[2][2] -0.6900 _refine.aniso_B[3][3] 1.8900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9680 _refine.correlation_coeff_Fo_to_Fc_free 0.9550 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0450 _refine.pdbx_overall_ESU_R_Free 0.0470 _refine.overall_SU_ML 0.0330 _refine.overall_SU_B 1.5750 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'inhouse model' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 60.790 _refine.B_iso_min 7.110 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.0400 _refine_hist.d_res_low 49.8900 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 1309 _refine_hist.pdbx_number_residues_total 132 _refine_hist.pdbx_B_iso_mean_ligand 23.70 _refine_hist.pdbx_B_iso_mean_solvent 28.11 _refine_hist.pdbx_number_atoms_protein 1103 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1220 0.014 0.013 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1110 0.001 0.017 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1666 1.914 1.668 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2598 1.623 1.598 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 143 6.175 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 79 35.852 22.152 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 215 10.877 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10 23.854 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 142 0.100 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1341 0.014 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 261 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2328 4.910 3.000 ? ? # _refine_ls_shell.d_res_high 1.0450 _refine_ls_shell.d_res_low 1.0720 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 4.5700 _refine_ls_shell.number_reflns_R_work 239 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3840 _refine_ls_shell.R_factor_R_free 0.2880 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.number_reflns_all 254 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5QU2 _struct.title 'Crystal Structure of human Nck SH3.1 in complex with peptide PPPVPNPDY' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5QU2 _struct_keywords.text 'SH3 DOMAIN, ADAPTOR, PEPTIDE BINDING, SIGNALING PROTEIN, DOMAIN SWAP' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP NCK1_HUMAN P16333 ? 1 MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERK 1 2 PDB 5QU2 5QU2 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5QU2 A 2 ? 60 ? P16333 1 ? 59 ? -1 57 2 1 5QU2 B 2 ? 60 ? P16333 1 ? 59 ? -1 57 3 2 5QU2 D 1 ? 11 ? 5QU2 179 ? 189 ? 179 189 4 2 5QU2 E 1 ? 11 ? 5QU2 179 ? 189 ? 179 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5QU2 SER A 1 ? UNP P16333 ? ? 'expression tag' -2 1 2 5QU2 SER B 1 ? UNP P16333 ? ? 'expression tag' -2 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1600 ? 1 MORE -31 ? 1 'SSA (A^2)' 4620 ? 2 'ABSA (A^2)' 1270 ? 2 MORE -8 ? 2 'SSA (A^2)' 4360 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,H,J 2 1 B,D,I,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'elutes as a monomer' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C ACE 1 C ? ? ? 1_555 C PRO 2 N ? ? D ACE 179 D PRO 180 1_555 ? ? ? ? ? ? ? 1.369 ? ? covale2 covale both ? C TYR 10 C ? ? ? 1_555 C NH2 11 N ? ? D TYR 188 D NH2 189 1_555 ? ? ? ? ? ? ? 1.651 sing ? covale3 covale both ? D ACE 1 C ? ? ? 1_555 D PRO 2 N ? ? E ACE 179 E PRO 180 1_555 ? ? ? ? ? ? ? 1.368 ? ? covale4 covale both ? D TYR 10 C A ? ? 1_555 D NH2 11 N A ? E TYR 188 E NH2 189 1_555 ? ? ? ? ? ? ? 1.432 ? ? covale5 covale both ? D TYR 10 C B ? ? 1_555 D NH2 11 N B ? E TYR 188 E NH2 189 1_555 ? ? ? ? ? ? ? 1.366 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 49 ? PRO A 53 ? THR A 46 PRO A 50 AA1 2 TRP A 39 ? ARG A 43 ? TRP A 36 ARG A 40 AA1 3 ARG A 29 ? ASP A 34 ? ARG A 26 ASP A 31 AA1 4 VAL A 7 ? ALA A 10 ? VAL A 4 ALA A 7 AA1 5 VAL A 57 ? ARG A 59 ? VAL A 54 ARG A 56 AA2 1 THR B 49 ? PRO B 53 ? THR B 46 PRO B 50 AA2 2 TRP B 39 ? ARG B 43 ? TRP B 36 ARG B 40 AA2 3 ARG B 29 ? ASP B 34 ? ARG B 26 ASP B 31 AA2 4 VAL B 7 ? ALA B 10 ? VAL B 4 ALA B 7 AA2 5 VAL B 57 ? GLU B 58 ? VAL B 54 GLU B 55 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 50 ? O GLY A 47 N VAL A 42 ? N VAL A 39 AA1 2 3 O ARG A 43 ? O ARG A 40 N TRP A 31 ? N TRP A 28 AA1 3 4 O LEU A 30 ? O LEU A 27 N VAL A 8 ? N VAL A 5 AA1 4 5 N VAL A 9 ? N VAL A 6 O GLU A 58 ? O GLU A 55 AA2 1 2 O GLY B 50 ? O GLY B 47 N VAL B 42 ? N VAL B 39 AA2 2 3 O ARG B 43 ? O ARG B 40 N TRP B 31 ? N TRP B 28 AA2 3 4 O LEU B 30 ? O LEU B 27 N VAL B 8 ? N VAL B 5 AA2 4 5 N VAL B 9 ? N VAL B 6 O GLU B 58 ? O GLU B 55 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 101 ? 3 'binding site for residue SO4 A 101' AC2 Software A SO4 102 ? 3 'binding site for residue SO4 A 102' AC3 Software D SO4 201 ? 8 'binding site for residue SO4 D 201' AC4 Software D ACE 179 ? 2 'binding site for Di-peptide ACE D 179 and PRO D 180' AC5 Software E ACE 179 ? 3 'binding site for Di-peptide ACE E 179 and PRO E 180' AC6 Software E TYR 188 ? 10 'binding site for Di-peptide TYR E 188 and NH2 E 189' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ARG A 59 ? ARG A 56 . ? 1_555 ? 2 AC1 3 HOH H . ? HOH A 227 . ? 1_555 ? 3 AC1 3 HOH H . ? HOH A 247 . ? 1_555 ? 4 AC2 3 ARG A 29 ? ARG A 26 . ? 1_555 ? 5 AC2 3 ASN A 47 ? ASN A 44 . ? 8_555 ? 6 AC2 3 HOH H . ? HOH A 202 . ? 8_555 ? 7 AC3 8 HOH H . ? HOH A 210 . ? 1_555 ? 8 AC3 8 GLN B 17 ? GLN B 14 . ? 7_555 ? 9 AC3 8 HOH I . ? HOH B 130 . ? 7_555 ? 10 AC3 8 PRO C 6 ? PRO D 184 . ? 1_555 ? 11 AC3 8 ASN C 7 ? ASN D 185 . ? 1_555 ? 12 AC3 8 HOH J . ? HOH D 301 . ? 1_555 ? 13 AC3 8 HOH J . ? HOH D 303 . ? 1_555 ? 14 AC3 8 HOH J . ? HOH D 309 . ? 1_555 ? 15 AC4 2 PHE A 12 ? PHE A 9 . ? 1_555 ? 16 AC4 2 PRO C 3 ? PRO D 181 . ? 1_555 ? 17 AC5 3 PHE B 12 ? PHE B 9 . ? 1_555 ? 18 AC5 3 TYR B 56 ? TYR B 53 . ? 1_555 ? 19 AC5 3 PRO D 3 ? PRO E 181 . ? 1_555 ? 20 AC6 10 GLN B 18 ? GLN B 15 . ? 1_555 ? 21 AC6 10 GLU B 21 ? GLU B 18 . ? 1_555 ? 22 AC6 10 LYS B 37 ? LYS B 34 . ? 1_555 ? 23 AC6 10 PHE B 51 ? PHE B 48 . ? 1_555 ? 24 AC6 10 HOH I . ? HOH B 115 . ? 1_555 ? 25 AC6 10 PRO D 8 ? PRO E 186 . ? 1_555 ? 26 AC6 10 PRO D 8 ? PRO E 186 . ? 6_645 ? 27 AC6 10 ASP D 9 ? ASP E 187 . ? 1_555 ? 28 AC6 10 ASP D 9 ? ASP E 187 . ? 6_645 ? 29 AC6 10 HOH K . ? HOH E 302 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 160 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 162 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA D PRO 180 ? ? N D PRO 180 ? ? CD D PRO 180 ? ? 100.78 111.50 -10.72 1.40 N 2 1 C E ACE 179 ? ? N E PRO 180 ? ? CD E PRO 180 ? ? 103.88 120.60 -16.72 2.20 Y 3 1 CA E PRO 180 ? ? N E PRO 180 ? ? CD E PRO 180 ? ? 94.94 111.50 -16.56 1.40 N 4 1 O E ASP 187 ? B C E ASP 187 ? B N E TYR 188 ? B 133.64 122.70 10.94 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 24 ? ? 82.61 -2.87 2 1 ASN B 24 ? ? 81.14 -5.27 3 1 ASP D 187 ? ? -143.60 30.51 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 D _pdbx_validate_polymer_linkage.auth_comp_id_1 TYR _pdbx_validate_polymer_linkage.auth_seq_id_1 188 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 D _pdbx_validate_polymer_linkage.auth_comp_id_2 NH2 _pdbx_validate_polymer_linkage.auth_seq_id_2 189 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.65 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 246 ? H HOH . 2 1 A HOH 273 ? H HOH . 3 1 A HOH 276 ? H HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A MET -1 ? A MET 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A GLU 1 ? A GLU 4 5 1 Y 1 B SER -2 ? B SER 1 6 1 Y 1 B MET -1 ? B MET 2 7 1 Y 1 B ALA 0 ? B ALA 3 8 1 Y 1 B LYS 57 ? B LYS 60 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 GLN N N N N 81 GLN CA C N S 82 GLN C C N N 83 GLN O O N N 84 GLN CB C N N 85 GLN CG C N N 86 GLN CD C N N 87 GLN OE1 O N N 88 GLN NE2 N N N 89 GLN OXT O N N 90 GLN H H N N 91 GLN H2 H N N 92 GLN HA H N N 93 GLN HB2 H N N 94 GLN HB3 H N N 95 GLN HG2 H N N 96 GLN HG3 H N N 97 GLN HE21 H N N 98 GLN HE22 H N N 99 GLN HXT H N N 100 GLU N N N N 101 GLU CA C N S 102 GLU C C N N 103 GLU O O N N 104 GLU CB C N N 105 GLU CG C N N 106 GLU CD C N N 107 GLU OE1 O N N 108 GLU OE2 O N N 109 GLU OXT O N N 110 GLU H H N N 111 GLU H2 H N N 112 GLU HA H N N 113 GLU HB2 H N N 114 GLU HB3 H N N 115 GLU HG2 H N N 116 GLU HG3 H N N 117 GLU HE2 H N N 118 GLU HXT H N N 119 GLY N N N N 120 GLY CA C N N 121 GLY C C N N 122 GLY O O N N 123 GLY OXT O N N 124 GLY H H N N 125 GLY H2 H N N 126 GLY HA2 H N N 127 GLY HA3 H N N 128 GLY HXT H N N 129 HOH O O N N 130 HOH H1 H N N 131 HOH H2 H N N 132 ILE N N N N 133 ILE CA C N S 134 ILE C C N N 135 ILE O O N N 136 ILE CB C N S 137 ILE CG1 C N N 138 ILE CG2 C N N 139 ILE CD1 C N N 140 ILE OXT O N N 141 ILE H H N N 142 ILE H2 H N N 143 ILE HA H N N 144 ILE HB H N N 145 ILE HG12 H N N 146 ILE HG13 H N N 147 ILE HG21 H N N 148 ILE HG22 H N N 149 ILE HG23 H N N 150 ILE HD11 H N N 151 ILE HD12 H N N 152 ILE HD13 H N N 153 ILE HXT H N N 154 LEU N N N N 155 LEU CA C N S 156 LEU C C N N 157 LEU O O N N 158 LEU CB C N N 159 LEU CG C N N 160 LEU CD1 C N N 161 LEU CD2 C N N 162 LEU OXT O N N 163 LEU H H N N 164 LEU H2 H N N 165 LEU HA H N N 166 LEU HB2 H N N 167 LEU HB3 H N N 168 LEU HG H N N 169 LEU HD11 H N N 170 LEU HD12 H N N 171 LEU HD13 H N N 172 LEU HD21 H N N 173 LEU HD22 H N N 174 LEU HD23 H N N 175 LEU HXT H N N 176 LYS N N N N 177 LYS CA C N S 178 LYS C C N N 179 LYS O O N N 180 LYS CB C N N 181 LYS CG C N N 182 LYS CD C N N 183 LYS CE C N N 184 LYS NZ N N N 185 LYS OXT O N N 186 LYS H H N N 187 LYS H2 H N N 188 LYS HA H N N 189 LYS HB2 H N N 190 LYS HB3 H N N 191 LYS HG2 H N N 192 LYS HG3 H N N 193 LYS HD2 H N N 194 LYS HD3 H N N 195 LYS HE2 H N N 196 LYS HE3 H N N 197 LYS HZ1 H N N 198 LYS HZ2 H N N 199 LYS HZ3 H N N 200 LYS HXT H N N 201 MET N N N N 202 MET CA C N S 203 MET C C N N 204 MET O O N N 205 MET CB C N N 206 MET CG C N N 207 MET SD S N N 208 MET CE C N N 209 MET OXT O N N 210 MET H H N N 211 MET H2 H N N 212 MET HA H N N 213 MET HB2 H N N 214 MET HB3 H N N 215 MET HG2 H N N 216 MET HG3 H N N 217 MET HE1 H N N 218 MET HE2 H N N 219 MET HE3 H N N 220 MET HXT H N N 221 NH2 N N N N 222 NH2 HN1 H N N 223 NH2 HN2 H N N 224 PHE N N N N 225 PHE CA C N S 226 PHE C C N N 227 PHE O O N N 228 PHE CB C N N 229 PHE CG C Y N 230 PHE CD1 C Y N 231 PHE CD2 C Y N 232 PHE CE1 C Y N 233 PHE CE2 C Y N 234 PHE CZ C Y N 235 PHE OXT O N N 236 PHE H H N N 237 PHE H2 H N N 238 PHE HA H N N 239 PHE HB2 H N N 240 PHE HB3 H N N 241 PHE HD1 H N N 242 PHE HD2 H N N 243 PHE HE1 H N N 244 PHE HE2 H N N 245 PHE HZ H N N 246 PHE HXT H N N 247 PRO N N N N 248 PRO CA C N S 249 PRO C C N N 250 PRO O O N N 251 PRO CB C N N 252 PRO CG C N N 253 PRO CD C N N 254 PRO OXT O N N 255 PRO H H N N 256 PRO HA H N N 257 PRO HB2 H N N 258 PRO HB3 H N N 259 PRO HG2 H N N 260 PRO HG3 H N N 261 PRO HD2 H N N 262 PRO HD3 H N N 263 PRO HXT H N N 264 SER N N N N 265 SER CA C N S 266 SER C C N N 267 SER O O N N 268 SER CB C N N 269 SER OG O N N 270 SER OXT O N N 271 SER H H N N 272 SER H2 H N N 273 SER HA H N N 274 SER HB2 H N N 275 SER HB3 H N N 276 SER HG H N N 277 SER HXT H N N 278 SO4 S S N N 279 SO4 O1 O N N 280 SO4 O2 O N N 281 SO4 O3 O N N 282 SO4 O4 O N N 283 THR N N N N 284 THR CA C N S 285 THR C C N N 286 THR O O N N 287 THR CB C N R 288 THR OG1 O N N 289 THR CG2 C N N 290 THR OXT O N N 291 THR H H N N 292 THR H2 H N N 293 THR HA H N N 294 THR HB H N N 295 THR HG1 H N N 296 THR HG21 H N N 297 THR HG22 H N N 298 THR HG23 H N N 299 THR HXT H N N 300 TRP N N N N 301 TRP CA C N S 302 TRP C C N N 303 TRP O O N N 304 TRP CB C N N 305 TRP CG C Y N 306 TRP CD1 C Y N 307 TRP CD2 C Y N 308 TRP NE1 N Y N 309 TRP CE2 C Y N 310 TRP CE3 C Y N 311 TRP CZ2 C Y N 312 TRP CZ3 C Y N 313 TRP CH2 C Y N 314 TRP OXT O N N 315 TRP H H N N 316 TRP H2 H N N 317 TRP HA H N N 318 TRP HB2 H N N 319 TRP HB3 H N N 320 TRP HD1 H N N 321 TRP HE1 H N N 322 TRP HE3 H N N 323 TRP HZ2 H N N 324 TRP HZ3 H N N 325 TRP HH2 H N N 326 TRP HXT H N N 327 TYR N N N N 328 TYR CA C N S 329 TYR C C N N 330 TYR O O N N 331 TYR CB C N N 332 TYR CG C Y N 333 TYR CD1 C Y N 334 TYR CD2 C Y N 335 TYR CE1 C Y N 336 TYR CE2 C Y N 337 TYR CZ C Y N 338 TYR OH O N N 339 TYR OXT O N N 340 TYR H H N N 341 TYR H2 H N N 342 TYR HA H N N 343 TYR HB2 H N N 344 TYR HB3 H N N 345 TYR HD1 H N N 346 TYR HD2 H N N 347 TYR HE1 H N N 348 TYR HE2 H N N 349 TYR HH H N N 350 TYR HXT H N N 351 VAL N N N N 352 VAL CA C N S 353 VAL C C N N 354 VAL O O N N 355 VAL CB C N N 356 VAL CG1 C N N 357 VAL CG2 C N N 358 VAL OXT O N N 359 VAL H H N N 360 VAL H2 H N N 361 VAL HA H N N 362 VAL HB H N N 363 VAL HG11 H N N 364 VAL HG12 H N N 365 VAL HG13 H N N 366 VAL HG21 H N N 367 VAL HG22 H N N 368 VAL HG23 H N N 369 VAL HXT H N N 370 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HOH O H1 sing N N 122 HOH O H2 sing N N 123 ILE N CA sing N N 124 ILE N H sing N N 125 ILE N H2 sing N N 126 ILE CA C sing N N 127 ILE CA CB sing N N 128 ILE CA HA sing N N 129 ILE C O doub N N 130 ILE C OXT sing N N 131 ILE CB CG1 sing N N 132 ILE CB CG2 sing N N 133 ILE CB HB sing N N 134 ILE CG1 CD1 sing N N 135 ILE CG1 HG12 sing N N 136 ILE CG1 HG13 sing N N 137 ILE CG2 HG21 sing N N 138 ILE CG2 HG22 sing N N 139 ILE CG2 HG23 sing N N 140 ILE CD1 HD11 sing N N 141 ILE CD1 HD12 sing N N 142 ILE CD1 HD13 sing N N 143 ILE OXT HXT sing N N 144 LEU N CA sing N N 145 LEU N H sing N N 146 LEU N H2 sing N N 147 LEU CA C sing N N 148 LEU CA CB sing N N 149 LEU CA HA sing N N 150 LEU C O doub N N 151 LEU C OXT sing N N 152 LEU CB CG sing N N 153 LEU CB HB2 sing N N 154 LEU CB HB3 sing N N 155 LEU CG CD1 sing N N 156 LEU CG CD2 sing N N 157 LEU CG HG sing N N 158 LEU CD1 HD11 sing N N 159 LEU CD1 HD12 sing N N 160 LEU CD1 HD13 sing N N 161 LEU CD2 HD21 sing N N 162 LEU CD2 HD22 sing N N 163 LEU CD2 HD23 sing N N 164 LEU OXT HXT sing N N 165 LYS N CA sing N N 166 LYS N H sing N N 167 LYS N H2 sing N N 168 LYS CA C sing N N 169 LYS CA CB sing N N 170 LYS CA HA sing N N 171 LYS C O doub N N 172 LYS C OXT sing N N 173 LYS CB CG sing N N 174 LYS CB HB2 sing N N 175 LYS CB HB3 sing N N 176 LYS CG CD sing N N 177 LYS CG HG2 sing N N 178 LYS CG HG3 sing N N 179 LYS CD CE sing N N 180 LYS CD HD2 sing N N 181 LYS CD HD3 sing N N 182 LYS CE NZ sing N N 183 LYS CE HE2 sing N N 184 LYS CE HE3 sing N N 185 LYS NZ HZ1 sing N N 186 LYS NZ HZ2 sing N N 187 LYS NZ HZ3 sing N N 188 LYS OXT HXT sing N N 189 MET N CA sing N N 190 MET N H sing N N 191 MET N H2 sing N N 192 MET CA C sing N N 193 MET CA CB sing N N 194 MET CA HA sing N N 195 MET C O doub N N 196 MET C OXT sing N N 197 MET CB CG sing N N 198 MET CB HB2 sing N N 199 MET CB HB3 sing N N 200 MET CG SD sing N N 201 MET CG HG2 sing N N 202 MET CG HG3 sing N N 203 MET SD CE sing N N 204 MET CE HE1 sing N N 205 MET CE HE2 sing N N 206 MET CE HE3 sing N N 207 MET OXT HXT sing N N 208 NH2 N HN1 sing N N 209 NH2 N HN2 sing N N 210 PHE N CA sing N N 211 PHE N H sing N N 212 PHE N H2 sing N N 213 PHE CA C sing N N 214 PHE CA CB sing N N 215 PHE CA HA sing N N 216 PHE C O doub N N 217 PHE C OXT sing N N 218 PHE CB CG sing N N 219 PHE CB HB2 sing N N 220 PHE CB HB3 sing N N 221 PHE CG CD1 doub Y N 222 PHE CG CD2 sing Y N 223 PHE CD1 CE1 sing Y N 224 PHE CD1 HD1 sing N N 225 PHE CD2 CE2 doub Y N 226 PHE CD2 HD2 sing N N 227 PHE CE1 CZ doub Y N 228 PHE CE1 HE1 sing N N 229 PHE CE2 CZ sing Y N 230 PHE CE2 HE2 sing N N 231 PHE CZ HZ sing N N 232 PHE OXT HXT sing N N 233 PRO N CA sing N N 234 PRO N CD sing N N 235 PRO N H sing N N 236 PRO CA C sing N N 237 PRO CA CB sing N N 238 PRO CA HA sing N N 239 PRO C O doub N N 240 PRO C OXT sing N N 241 PRO CB CG sing N N 242 PRO CB HB2 sing N N 243 PRO CB HB3 sing N N 244 PRO CG CD sing N N 245 PRO CG HG2 sing N N 246 PRO CG HG3 sing N N 247 PRO CD HD2 sing N N 248 PRO CD HD3 sing N N 249 PRO OXT HXT sing N N 250 SER N CA sing N N 251 SER N H sing N N 252 SER N H2 sing N N 253 SER CA C sing N N 254 SER CA CB sing N N 255 SER CA HA sing N N 256 SER C O doub N N 257 SER C OXT sing N N 258 SER CB OG sing N N 259 SER CB HB2 sing N N 260 SER CB HB3 sing N N 261 SER OG HG sing N N 262 SER OXT HXT sing N N 263 SO4 S O1 doub N N 264 SO4 S O2 doub N N 265 SO4 S O3 sing N N 266 SO4 S O4 sing N N 267 THR N CA sing N N 268 THR N H sing N N 269 THR N H2 sing N N 270 THR CA C sing N N 271 THR CA CB sing N N 272 THR CA HA sing N N 273 THR C O doub N N 274 THR C OXT sing N N 275 THR CB OG1 sing N N 276 THR CB CG2 sing N N 277 THR CB HB sing N N 278 THR OG1 HG1 sing N N 279 THR CG2 HG21 sing N N 280 THR CG2 HG22 sing N N 281 THR CG2 HG23 sing N N 282 THR OXT HXT sing N N 283 TRP N CA sing N N 284 TRP N H sing N N 285 TRP N H2 sing N N 286 TRP CA C sing N N 287 TRP CA CB sing N N 288 TRP CA HA sing N N 289 TRP C O doub N N 290 TRP C OXT sing N N 291 TRP CB CG sing N N 292 TRP CB HB2 sing N N 293 TRP CB HB3 sing N N 294 TRP CG CD1 doub Y N 295 TRP CG CD2 sing Y N 296 TRP CD1 NE1 sing Y N 297 TRP CD1 HD1 sing N N 298 TRP CD2 CE2 doub Y N 299 TRP CD2 CE3 sing Y N 300 TRP NE1 CE2 sing Y N 301 TRP NE1 HE1 sing N N 302 TRP CE2 CZ2 sing Y N 303 TRP CE3 CZ3 doub Y N 304 TRP CE3 HE3 sing N N 305 TRP CZ2 CH2 doub Y N 306 TRP CZ2 HZ2 sing N N 307 TRP CZ3 CH2 sing Y N 308 TRP CZ3 HZ3 sing N N 309 TRP CH2 HH2 sing N N 310 TRP OXT HXT sing N N 311 TYR N CA sing N N 312 TYR N H sing N N 313 TYR N H2 sing N N 314 TYR CA C sing N N 315 TYR CA CB sing N N 316 TYR CA HA sing N N 317 TYR C O doub N N 318 TYR C OXT sing N N 319 TYR CB CG sing N N 320 TYR CB HB2 sing N N 321 TYR CB HB3 sing N N 322 TYR CG CD1 doub Y N 323 TYR CG CD2 sing Y N 324 TYR CD1 CE1 sing Y N 325 TYR CD1 HD1 sing N N 326 TYR CD2 CE2 doub Y N 327 TYR CD2 HD2 sing N N 328 TYR CE1 CZ doub Y N 329 TYR CE1 HE1 sing N N 330 TYR CE2 CZ sing Y N 331 TYR CE2 HE2 sing N N 332 TYR CZ OH sing N N 333 TYR OH HH sing N N 334 TYR OXT HXT sing N N 335 VAL N CA sing N N 336 VAL N H sing N N 337 VAL N H2 sing N N 338 VAL CA C sing N N 339 VAL CA CB sing N N 340 VAL CA HA sing N N 341 VAL C O doub N N 342 VAL C OXT sing N N 343 VAL CB CG1 sing N N 344 VAL CB CG2 sing N N 345 VAL CB HB sing N N 346 VAL CG1 HG11 sing N N 347 VAL CG1 HG12 sing N N 348 VAL CG1 HG13 sing N N 349 VAL CG2 HG21 sing N N 350 VAL CG2 HG22 sing N N 351 VAL CG2 HG23 sing N N 352 VAL OXT HXT sing N N 353 # _pdbx_deposit_group.group_id G_1002110 _pdbx_deposit_group.group_description ;Monomeric and dimeric, as well as peptide-bound structures of the first SH3 domain of the human adapter protein Nck1 were determined. ; _pdbx_deposit_group.group_title 'structural plasticity of the Nck1-SH3.1 domain' _pdbx_deposit_group.group_type undefined # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'inhouse model' # _atom_sites.entry_id 5QU2 _atom_sites.fract_transf_matrix[1][1] 0.019743 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015788 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010032 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_