HEADER SIGNALING PROTEIN 03-MAR-20 5R86 TITLE PANDDA ANALYSIS GROUP DEPOSITION INTERLEUKIN-1 BETA -- FRAGMENT TITLE 2 Z943693514 IN COMPLEX WITH INTERLEUKIN-1 BETA COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-1 BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-1 BETA,CATABOLIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL1B, IL1F2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IL-1 BETA, SIGNALING PROTEIN, SGC - DIAMOND I04-1 FRAGMENT SCREENING, KEYWDS 2 PANDDA, XCHEMEXPLORER EXPDTA X-RAY DIFFRACTION AUTHOR G.F.DE NICOLA,C.E.NICHOLS REVDAT 4 06-MAR-24 5R86 1 REMARK REVDAT 3 05-AUG-20 5R86 1 JRNL REVDAT 2 22-JUL-20 5R86 1 JRNL REVDAT 1 22-APR-20 5R86 0 JRNL AUTH C.NICHOLS,J.NG,A.KESHU,G.KELLY,M.R.CONTE,M.S.MARBER, JRNL AUTH 2 F.FRATERNALI,G.F.DE NICOLA JRNL TITL MINING THE PDB FOR TRACTABLE CASES WHERE X-RAY JRNL TITL 2 CRYSTALLOGRAPHY COMBINED WITH FRAGMENT SCREENS CAN BE USED JRNL TITL 3 TO SYSTEMATICALLY DESIGN PROTEIN-PROTEIN INHIBITORS: TWO JRNL TITL 4 TEST CASES ILLUSTRATED BY IL1 BETA-IL1R AND P38 ALPHA-TAB1 JRNL TITL 5 COMPLEXES. JRNL REF J.MED.CHEM. V. 63 7559 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32543856 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00403 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1778 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2453 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1170 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : 0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.783 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2435 ; 0.013 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 1693 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2497 ; 1.808 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3968 ; 1.382 ; 1.602 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 251 ; 8.000 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;32.151 ;24.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 334 ;14.570 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 7.050 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 226 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2232 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 366 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1297 ; 2.840 ; 3.370 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1276 ; 2.863 ; 3.325 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1213 ; 5.231 ; 4.722 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5R86 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1001402891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.96871 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35360 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 37.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.44300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 2NVH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8M AMMONIUM SULPHATE, 0.1M TRIS REMARK 280 PH7.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.55500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.33250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.77750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 137 REMARK 465 LYS A 138 REMARK 465 GLY A 139 REMARK 465 SER A 153 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 1 CB REMARK 470 GLN A 34 CG CD OE1 NE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 55 CD CE NZ REMARK 470 LYS A 93 CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 GLN A 141 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB ASP A 76 O HOH A 301 1.70 REMARK 500 O ASP A 76 O HOH A 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 367 O HOH A 393 3654 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GT4 A 203 DBREF 5R86 A 1 153 UNP P01584 IL1B_HUMAN 117 269 SEQRES 1 A 153 ALA PRO VAL ARG SER LEU ASN CYS THR LEU ARG ASP SER SEQRES 2 A 153 GLN GLN LYS SER LEU VAL MET SER GLY PRO TYR GLU LEU SEQRES 3 A 153 LYS ALA LEU HIS LEU GLN GLY GLN ASP MET GLU GLN GLN SEQRES 4 A 153 VAL VAL PHE SER MET SER PHE VAL GLN GLY GLU GLU SER SEQRES 5 A 153 ASN ASP LYS ILE PRO VAL ALA LEU GLY LEU LYS GLU LYS SEQRES 6 A 153 ASN LEU TYR LEU SER CYS VAL LEU LYS ASP ASP LYS PRO SEQRES 7 A 153 THR LEU GLN LEU GLU SER VAL ASP PRO LYS ASN TYR PRO SEQRES 8 A 153 LYS LYS LYS MET GLU LYS ARG PHE VAL PHE ASN LYS ILE SEQRES 9 A 153 GLU ILE ASN ASN LYS LEU GLU PHE GLU SER ALA GLN PHE SEQRES 10 A 153 PRO ASN TRP TYR ILE SER THR SER GLN ALA GLU ASN MET SEQRES 11 A 153 PRO VAL PHE LEU GLY GLY THR LYS GLY GLY GLN ASP ILE SEQRES 12 A 153 THR ASP PHE THR MET GLN PHE VAL SER SER HET SO4 A 201 5 HET SO4 A 202 5 HET GT4 A 203 13 HETNAM SO4 SULFATE ION HETNAM GT4 ~{N}-(4-HYDROXYPHENYL)-2-METHOXY-ETHANAMIDE FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 GT4 C9 H11 N O3 FORMUL 5 HOH *109(H2 O) HELIX 1 AA1 GLN A 32 GLN A 39 5 8 HELIX 2 AA2 GLU A 96 ARG A 98 5 3 SHEET 1 AA1 7 ARG A 4 ASP A 12 0 SHEET 2 AA1 7 PHE A 42 PHE A 46 -1 O MET A 44 N LEU A 6 SHEET 3 AA1 7 LYS A 55 LEU A 62 -1 O GLY A 61 N SER A 43 SHEET 4 AA1 7 VAL A 100 ILE A 106 -1 O PHE A 101 N VAL A 58 SHEET 5 AA1 7 LYS A 109 SER A 114 -1 O GLU A 113 N ASN A 102 SHEET 6 AA1 7 PHE A 146 PHE A 150 -1 O PHE A 146 N LEU A 110 SHEET 7 AA1 7 ARG A 4 ASP A 12 -1 N ARG A 11 O THR A 147 SHEET 1 AA2 3 SER A 17 MET A 20 0 SHEET 2 AA2 3 LEU A 26 LEU A 29 -1 O LEU A 29 N SER A 17 SHEET 3 AA2 3 MET A 130 PRO A 131 -1 O MET A 130 N ALA A 28 SHEET 1 AA3 2 LEU A 67 LYS A 74 0 SHEET 2 AA3 2 LYS A 77 SER A 84 -1 O GLN A 81 N SER A 70 SHEET 1 AA4 2 TYR A 121 SER A 123 0 SHEET 2 AA4 2 PHE A 133 GLY A 135 -1 O PHE A 133 N SER A 123 CISPEP 1 TYR A 90 PRO A 91 0 -4.42 SITE 1 AC1 4 ALA A 1 VAL A 3 LYS A 92 LYS A 93 SITE 1 AC2 4 GLU A 96 ARG A 98 HOH A 312 HOH A 325 SITE 1 AC3 6 ASN A 119 TRP A 120 GLY A 136 THR A 147 SITE 2 AC3 6 MET A 148 HOH A 357 CRYST1 54.670 54.670 75.110 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018292 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013314 0.00000 TER 1222 SER A 152 HETATM 1223 S SO4 A 201 29.019 13.544 50.918 1.00 85.53 S HETATM 1224 O1 SO4 A 201 28.836 12.205 50.391 1.00 88.84 O HETATM 1225 O2 SO4 A 201 28.540 14.520 49.957 1.00101.17 O HETATM 1226 O3 SO4 A 201 28.274 13.675 52.139 1.00 75.66 O HETATM 1227 O4 SO4 A 201 30.417 13.779 51.163 1.00 90.55 O HETATM 1228 S SO4 A 202 24.014 3.574 60.805 1.00 55.18 S HETATM 1229 O1 SO4 A 202 25.420 3.714 60.477 1.00 46.17 O HETATM 1230 O2 SO4 A 202 23.231 3.831 59.623 1.00 56.30 O HETATM 1231 O3 SO4 A 202 23.794 2.233 61.272 1.00 61.62 O HETATM 1232 O4 SO4 A 202 23.604 4.511 61.825 1.00 45.29 O HETATM 1233 N1 GT4 A 203 41.350 27.193 65.850 0.43 22.56 N HETATM 1234 C4 GT4 A 203 42.405 26.692 66.616 0.43 22.13 C HETATM 1235 C5 GT4 A 203 43.338 25.867 66.018 0.43 22.38 C HETATM 1236 C6 GT4 A 203 44.385 25.323 66.727 0.43 21.83 C HETATM 1237 C7 GT4 A 203 44.528 25.611 68.093 0.43 21.48 C HETATM 1238 C8 GT4 A 203 43.610 26.482 68.740 0.43 20.72 C HETATM 1239 C1 GT4 A 203 38.511 28.033 62.999 0.43 22.23 C HETATM 1240 O1 GT4 A 203 39.467 27.720 63.972 0.43 25.25 O HETATM 1241 C2 GT4 A 203 39.998 28.907 64.609 0.43 24.42 C HETATM 1242 C3 GT4 A 203 41.204 28.544 65.490 0.43 24.94 C HETATM 1243 O2 GT4 A 203 41.986 29.460 65.869 0.43 24.37 O HETATM 1244 C9 GT4 A 203 42.530 27.027 67.993 0.43 22.50 C HETATM 1245 O3 GT4 A 203 45.558 25.021 68.859 0.43 20.41 O HETATM 1246 O HOH A 301 23.877 4.461 83.155 1.00 39.97 O HETATM 1247 O HOH A 302 37.612 22.264 78.811 1.00 44.48 O HETATM 1248 O HOH A 303 36.669 1.244 70.723 1.00 38.77 O HETATM 1249 O HOH A 304 46.139 2.121 56.892 1.00 45.71 O HETATM 1250 O HOH A 305 41.723 -1.787 70.842 1.00 45.39 O HETATM 1251 O HOH A 306 27.672 22.469 59.833 1.00 50.66 O HETATM 1252 O HOH A 307 41.121 10.039 84.794 1.00 39.84 O HETATM 1253 O HOH A 308 34.304 -0.277 67.758 1.00 51.97 O HETATM 1254 O HOH A 309 36.172 13.308 83.699 1.00 40.31 O HETATM 1255 O HOH A 310 49.903 5.263 67.202 1.00 43.51 O HETATM 1256 O HOH A 311 50.510 5.703 84.253 1.00 43.94 O HETATM 1257 O HOH A 312 21.736 6.220 61.302 1.00 56.03 O HETATM 1258 O HOH A 313 32.953 7.497 79.281 1.00 44.13 O HETATM 1259 O HOH A 314 46.983 9.140 79.706 1.00 26.90 O HETATM 1260 O HOH A 315 37.112 12.654 58.802 1.00 28.04 O HETATM 1261 O HOH A 316 26.947 5.542 54.599 1.00 46.91 O HETATM 1262 O HOH A 317 39.795 -5.468 63.480 1.00 32.82 O HETATM 1263 O HOH A 318 38.122 10.661 57.291 1.00 31.29 O HETATM 1264 O HOH A 319 28.793 8.324 51.260 1.00 38.17 O HETATM 1265 O HOH A 320 29.989 1.882 61.187 1.00 44.59 O HETATM 1266 O HOH A 321 52.411 9.975 63.185 1.00 38.80 O HETATM 1267 O HOH A 322 41.856 7.289 81.039 1.00 33.78 O HETATM 1268 O HOH A 323 53.398 16.933 66.320 1.00 45.57 O HETATM 1269 O HOH A 324 49.073 13.739 69.376 1.00 23.26 O HETATM 1270 O HOH A 325 22.964 6.259 58.388 1.00 46.32 O HETATM 1271 O HOH A 326 32.807 20.001 54.494 1.00 41.04 O HETATM 1272 O HOH A 327 34.214 11.079 64.324 1.00 20.03 O HETATM 1273 O HOH A 328 39.382 11.937 55.235 1.00 39.72 O HETATM 1274 O HOH A 329 53.665 14.921 73.489 1.00 28.34 O HETATM 1275 O HOH A 330 26.744 15.272 60.122 1.00 43.06 O HETATM 1276 O HOH A 331 37.352 15.103 52.432 1.00 47.89 O HETATM 1277 O HOH A 332 26.689 22.073 75.848 1.00 42.52 O HETATM 1278 O HOH A 333 46.867 13.388 67.551 1.00 21.63 O HETATM 1279 O HOH A 334 25.332 6.947 69.896 1.00 31.77 O HETATM 1280 O HOH A 335 38.009 5.414 50.560 1.00 37.12 O HETATM 1281 O HOH A 336 30.490 18.827 81.252 1.00 39.28 O HETATM 1282 O HOH A 337 38.123 4.944 76.769 1.00 37.21 O HETATM 1283 O HOH A 338 31.309 21.806 60.105 1.00 27.96 O HETATM 1284 O HOH A 339 42.087 15.150 55.571 1.00 36.40 O HETATM 1285 O HOH A 340 43.694 23.995 79.983 1.00 57.43 O HETATM 1286 O HOH A 341 37.274 18.012 74.878 1.00 21.77 O HETATM 1287 O HOH A 342 52.401 21.496 59.278 1.00 39.74 O HETATM 1288 O HOH A 343 28.497 12.414 69.154 1.00 24.55 O HETATM 1289 O HOH A 344 25.253 16.608 63.018 1.00 40.38 O HETATM 1290 O HOH A 345 26.357 20.217 66.019 1.00 33.21 O HETATM 1291 O HOH A 346 39.486 8.578 58.328 1.00 30.68 O HETATM 1292 O HOH A 347 51.851 17.374 64.488 1.00 36.70 O HETATM 1293 O HOH A 348 27.651 22.933 72.312 1.00 44.90 O HETATM 1294 O HOH A 349 29.470 21.500 79.699 1.00 40.55 O HETATM 1295 O HOH A 350 48.674 21.329 74.089 1.00 29.50 O HETATM 1296 O HOH A 351 35.764 4.470 76.233 1.00 42.29 O HETATM 1297 O HOH A 352 33.608 9.681 82.387 1.00 39.01 O HETATM 1298 O HOH A 353 36.032 25.591 66.784 1.00 31.32 O HETATM 1299 O HOH A 354 24.493 10.201 55.440 1.00 54.77 O HETATM 1300 O HOH A 355 28.169 2.795 54.947 1.00 38.95 O HETATM 1301 O HOH A 356 38.313 19.344 82.630 1.00 39.40 O HETATM 1302 O HOH A 357 40.595 24.478 64.570 1.00 29.92 O HETATM 1303 O HOH A 358 43.205 12.478 85.850 1.00 37.57 O HETATM 1304 O HOH A 359 42.061 10.154 55.465 1.00 42.84 O HETATM 1305 O HOH A 360 36.090 14.777 81.592 1.00 29.95 O HETATM 1306 O HOH A 361 44.298 9.672 79.127 1.00 25.67 O HETATM 1307 O HOH A 362 45.387 18.286 55.271 1.00 38.73 O HETATM 1308 O HOH A 363 29.897 16.492 86.230 1.00 44.12 O HETATM 1309 O HOH A 364 36.981 31.553 75.507 1.00 50.99 O HETATM 1310 O HOH A 365 54.035 19.925 66.633 1.00 49.65 O HETATM 1311 O HOH A 366 53.555 20.636 83.449 1.00 33.05 O HETATM 1312 O HOH A 367 37.788 24.703 61.993 1.00 28.92 O HETATM 1313 O HOH A 368 34.702 6.684 77.247 1.00 28.92 O HETATM 1314 O HOH A 369 51.614 12.425 82.598 1.00 43.29 O HETATM 1315 O HOH A 370 51.552 8.430 85.171 1.00 37.89 O HETATM 1316 O HOH A 371 49.014 -0.695 70.101 1.00 60.73 O HETATM 1317 O HOH A 372 28.741 0.732 68.399 1.00 58.84 O HETATM 1318 O HOH A 373 27.995 2.133 66.754 1.00 46.86 O HETATM 1319 O HOH A 374 63.468 14.721 73.168 1.00 41.39 O HETATM 1320 O HOH A 375 24.073 22.177 77.986 1.00 34.03 O HETATM 1321 O HOH A 376 37.784 8.159 51.378 1.00 43.65 O HETATM 1322 O HOH A 377 29.621 1.918 57.167 1.00 34.90 O HETATM 1323 O HOH A 378 38.180 4.051 72.158 1.00 49.92 O HETATM 1324 O HOH A 379 25.225 19.926 68.481 1.00 34.55 O HETATM 1325 O HOH A 380 45.779 20.727 57.663 1.00 39.46 O HETATM 1326 O HOH A 381 41.088 20.697 80.951 1.00 31.88 O HETATM 1327 O HOH A 382 31.778 -1.245 62.853 1.00 48.77 O HETATM 1328 O HOH A 383 28.858 3.317 59.460 1.00 36.05 O HETATM 1329 O HOH A 384 23.915 26.308 62.080 1.00 59.62 O HETATM 1330 O HOH A 385 24.580 7.666 65.243 1.00 28.53 O HETATM 1331 O HOH A 386 26.569 23.693 68.193 1.00 58.94 O HETATM 1332 O HOH A 387 39.895 5.685 73.020 1.00 30.71 O HETATM 1333 O HOH A 388 24.548 14.069 62.833 1.00 38.81 O HETATM 1334 O HOH A 389 19.454 2.207 81.769 1.00 41.18 O HETATM 1335 O HOH A 390 34.611 20.949 48.668 1.00 56.30 O HETATM 1336 O HOH A 391 24.334 4.852 71.649 1.00 39.24 O HETATM 1337 O HOH A 392 45.183 10.083 86.463 1.00 43.55 O HETATM 1338 O HOH A 393 24.684 15.047 80.707 1.00 28.90 O HETATM 1339 O HOH A 394 48.921 23.437 75.557 1.00 34.53 O HETATM 1340 O HOH A 395 32.527 23.825 56.587 1.00 44.00 O HETATM 1341 O HOH A 396 29.469 7.196 48.737 1.00 61.12 O HETATM 1342 O HOH A 397 35.987 28.288 66.646 1.00 37.95 O HETATM 1343 O HOH A 398 46.519 -0.566 66.123 1.00 56.99 O HETATM 1344 O HOH A 399 24.558 -0.205 76.407 1.00 52.62 O HETATM 1345 O HOH A 400 24.957 18.027 65.116 1.00 45.49 O HETATM 1346 O HOH A 401 24.374 5.460 67.858 1.00 42.69 O HETATM 1347 O HOH A 402 50.344 13.301 57.933 1.00 48.65 O HETATM 1348 O HOH A 403 34.886 1.868 77.208 1.00 51.37 O HETATM 1349 O HOH A 404 24.927 11.040 52.894 1.00 47.27 O HETATM 1350 O HOH A 405 39.868 5.310 81.194 1.00 54.77 O HETATM 1351 O HOH A 406 44.219 1.382 80.919 1.00 54.89 O HETATM 1352 O HOH A 407 43.688 12.951 88.596 1.00 56.83 O HETATM 1353 O HOH A 408 38.128 4.435 79.475 1.00 41.77 O HETATM 1354 O HOH A 409 42.386 2.065 82.167 1.00 50.10 O CONECT 1223 1224 1225 1226 1227 CONECT 1224 1223 CONECT 1225 1223 CONECT 1226 1223 CONECT 1227 1223 CONECT 1228 1229 1230 1231 1232 CONECT 1229 1228 CONECT 1230 1228 CONECT 1231 1228 CONECT 1232 1228 CONECT 1233 1234 1242 CONECT 1234 1233 1235 1244 CONECT 1235 1234 1236 CONECT 1236 1235 1237 CONECT 1237 1236 1238 1245 CONECT 1238 1237 1244 CONECT 1239 1240 CONECT 1240 1239 1241 CONECT 1241 1240 1242 CONECT 1242 1233 1241 1243 CONECT 1243 1242 CONECT 1244 1234 1238 CONECT 1245 1237 MASTER 303 0 3 2 14 0 4 6 1302 1 23 12 END