HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 16-MAR-20 5RAI TITLE PANDDA ANALYSIS GROUP DEPOSITION -- CRYSTAL STRUCTURE OF JMJD1B IN TITLE 2 COMPLEX WITH XS040404C COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 3B; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 2B, COMPND 5 JUMONJI DOMAIN-CONTAINING PROTEIN 1B,NUCLEAR PROTEIN 5QNCA; COMPND 6 EC: 1.14.11.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KDM3B, C5ORF7, JHDM2B, JMJD1B, KIAA1082; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SGC - DIAMOND I04-1 FRAGMENT SCREENING, PANDDA, XCHEMEXPLORER, KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.SNEE,R.NOWAK,C.JOHANSSON,N.A.BURGESS-BROWN,C.H.ARROWSMITH, AUTHOR 2 C.BOUNTRA,A.M.EDWARDS,U.OPPERMANN REVDAT 2 06-MAR-24 5RAI 1 REMARK REVDAT 1 22-APR-20 5RAI 0 JRNL AUTH M.SNEE,R.NOWAK,C.JOHANSSON,N.A.BURGESS-BROWN,C.H.ARROWSMITH, JRNL AUTH 2 C.BOUNTRA,A.M.EDWARDS,U.OPPERMANN JRNL TITL PANDDA ANALYSIS GROUP DEPOSITION OF HUMAN JMJD1B SCREENED JRNL TITL 2 AGAINST THE DSPL FRAGMENT LIBRARY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 130815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6877 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9665 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 483 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5510 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 684 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.36000 REMARK 3 B22 (A**2) : -1.53000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.29000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.078 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.232 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6851 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5714 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8712 ; 1.751 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13310 ; 1.339 ; 1.590 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 801 ; 7.429 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 378 ;29.130 ;22.063 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1088 ;15.433 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;18.430 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 772 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7570 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1413 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3322 ; 2.918 ; 3.600 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3295 ; 2.928 ; 3.574 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3927 ; 4.608 ; 5.118 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5RAI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1001402975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 137721 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 89.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 1.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6RBJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 5.5 21% PEG3350 0.3M REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.77000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1357 REMARK 465 HIS A 1358 REMARK 465 HIS A 1359 REMARK 465 HIS A 1360 REMARK 465 HIS A 1361 REMARK 465 HIS A 1362 REMARK 465 HIS A 1363 REMARK 465 SER A 1364 REMARK 465 SER A 1365 REMARK 465 GLY A 1366 REMARK 465 VAL A 1367 REMARK 465 ASP A 1368 REMARK 465 LEU A 1369 REMARK 465 GLY A 1370 REMARK 465 THR A 1371 REMARK 465 GLU A 1372 REMARK 465 ASN A 1373 REMARK 465 LEU A 1374 REMARK 465 TYR A 1375 REMARK 465 PHE A 1376 REMARK 465 GLN A 1377 REMARK 465 GLN A 1718 REMARK 465 GLU A 1719 REMARK 465 PHE A 1720 REMARK 465 ARG A 1721 REMARK 465 HIS A 1722 REMARK 465 LEU A 1723 REMARK 465 SER A 1724 REMARK 465 ASN A 1725 REMARK 465 THR A 1726 REMARK 465 HIS A 1727 REMARK 465 THR A 1728 REMARK 465 MET B 1357 REMARK 465 HIS B 1358 REMARK 465 HIS B 1359 REMARK 465 HIS B 1360 REMARK 465 HIS B 1361 REMARK 465 HIS B 1362 REMARK 465 HIS B 1363 REMARK 465 SER B 1364 REMARK 465 SER B 1365 REMARK 465 GLY B 1366 REMARK 465 VAL B 1367 REMARK 465 ASP B 1368 REMARK 465 LEU B 1369 REMARK 465 GLY B 1370 REMARK 465 THR B 1371 REMARK 465 GLU B 1372 REMARK 465 ASN B 1373 REMARK 465 LEU B 1374 REMARK 465 TYR B 1375 REMARK 465 PHE B 1376 REMARK 465 GLN B 1377 REMARK 465 SER B 1378 REMARK 465 GLY B 1578 REMARK 465 GLU B 1579 REMARK 465 GLY B 1580 REMARK 465 THR B 1726 REMARK 465 HIS B 1727 REMARK 465 THR B 1728 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1399 CG CD CE NZ REMARK 470 LYS A1425 CG CD CE NZ REMARK 470 GLN A1436 CG CD OE1 NE2 REMARK 470 ARG A1520 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1533 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1711 CG CD CE NZ REMARK 470 LYS B1399 CG CD CE NZ REMARK 470 ARG B1406 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1471 CG CD CE NZ REMARK 470 GLU B1507 CG CD OE1 OE2 REMARK 470 GLU B1513 CG CD OE1 OE2 REMARK 470 ARG B1533 CG CD NE CZ NH1 NH2 REMARK 470 ASP B1583 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2183 O HOH B 2154 1.40 REMARK 500 O HOH A 2183 O HOH A 2187 1.51 REMARK 500 O HOH A 1917 O HOH A 2227 1.56 REMARK 500 O HOH A 2201 O HOH B 2084 1.81 REMARK 500 O HOH A 2187 O HOH B 2154 1.83 REMARK 500 O HOH A 1906 O HOH A 2050 1.84 REMARK 500 O HOH A 2075 O HOH A 2092 1.91 REMARK 500 O HOH B 1925 O HOH B 2126 1.92 REMARK 500 O HOH A 2109 O HOH A 2111 1.93 REMARK 500 NH1 ARG A 1406 O HOH A 1901 1.94 REMARK 500 O HOH B 2026 O HOH B 2188 2.02 REMARK 500 O HOH A 2082 O HOH A 2184 2.07 REMARK 500 O HOH B 2179 O HOH B 2182 2.07 REMARK 500 OD1 ASN B 1400 O HOH B 1901 2.09 REMARK 500 NH2 ARG A 1474 O HOH A 1902 2.10 REMARK 500 O HOH B 2143 O HOH B 2177 2.10 REMARK 500 O HOH B 2158 O HOH B 2186 2.13 REMARK 500 O HOH A 2113 O HOH A 2239 2.13 REMARK 500 OE2 GLU B 1492 O HOH B 1902 2.15 REMARK 500 O HOH B 2040 O HOH B 2169 2.16 REMARK 500 OD1 ASP B 1518 O HOH B 1903 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2193 O HOH A 2246 2648 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A1562 CG ASP A1562 OD2 0.163 REMARK 500 GLU B1708 CD GLU B1708 OE2 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A1470 N - CA - CB ANGL. DEV. = 9.2 DEGREES REMARK 500 ASP A1562 CB - CA - C ANGL. DEV. = 13.2 DEGREES REMARK 500 ASP A1562 CB - CG - OD2 ANGL. DEV. = 8.4 DEGREES REMARK 500 TYR A1617 CB - CG - CD2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A1661 CG - CD - NE ANGL. DEV. = -14.0 DEGREES REMARK 500 TYR B1544 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A1579 45.16 -102.33 REMARK 500 ALA A1581 16.60 134.41 REMARK 500 HIS A1582 47.91 -87.86 REMARK 500 ILE B1547 -52.44 -125.22 REMARK 500 ASP B1605 -87.56 -61.98 REMARK 500 HIS B1606 -175.75 -60.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2269 DISTANCE = 6.13 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1806 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1560 NE2 REMARK 620 2 ASP A1562 OD2 99.7 REMARK 620 3 HIS A1689 NE2 92.0 89.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1802 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1560 NE2 REMARK 620 2 ASP B1562 OD2 104.3 REMARK 620 3 HIS B1689 NE2 90.9 91.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue S3M A 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 1806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 1802 DBREF 5RAI A 1380 1728 UNP Q7LBC6 KDM3B_HUMAN 1380 1728 DBREF 5RAI B 1380 1728 UNP Q7LBC6 KDM3B_HUMAN 1380 1728 SEQADV 5RAI MET A 1357 UNP Q7LBC6 INITIATING METHIONINE SEQADV 5RAI HIS A 1358 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS A 1359 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS A 1360 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS A 1361 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS A 1362 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS A 1363 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER A 1364 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER A 1365 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLY A 1366 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI VAL A 1367 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI ASP A 1368 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI LEU A 1369 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLY A 1370 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI THR A 1371 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLU A 1372 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI ASN A 1373 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI LEU A 1374 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI TYR A 1375 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI PHE A 1376 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLN A 1377 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER A 1378 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI MET A 1379 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLU A 1601 UNP Q7LBC6 GLN 1601 CONFLICT SEQADV 5RAI HIS A 1606 UNP Q7LBC6 GLY 1606 CONFLICT SEQADV 5RAI MET B 1357 UNP Q7LBC6 INITIATING METHIONINE SEQADV 5RAI HIS B 1358 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS B 1359 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS B 1360 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS B 1361 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS B 1362 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI HIS B 1363 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER B 1364 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER B 1365 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLY B 1366 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI VAL B 1367 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI ASP B 1368 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI LEU B 1369 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLY B 1370 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI THR B 1371 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLU B 1372 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI ASN B 1373 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI LEU B 1374 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI TYR B 1375 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI PHE B 1376 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLN B 1377 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI SER B 1378 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI MET B 1379 UNP Q7LBC6 EXPRESSION TAG SEQADV 5RAI GLU B 1601 UNP Q7LBC6 GLN 1601 CONFLICT SEQADV 5RAI HIS B 1606 UNP Q7LBC6 GLY 1606 CONFLICT SEQRES 1 A 372 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 372 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER HIS SEQRES 3 A 372 SER TRP LEU CYS ASP GLY ARG LEU LEU CYS LEU HIS ASP SEQRES 4 A 372 PRO SER ASN LYS ASN ASN TRP LYS ILE PHE ARG GLU CYS SEQRES 5 A 372 TRP LYS GLN GLY GLN PRO VAL LEU VAL SER GLY VAL HIS SEQRES 6 A 372 LYS LYS LEU LYS SER GLU LEU TRP LYS PRO GLU ALA PHE SEQRES 7 A 372 SER GLN GLU PHE GLY ASP GLN ASP VAL ASP LEU VAL ASN SEQRES 8 A 372 CYS ARG ASN CYS ALA ILE ILE SER ASP VAL LYS VAL ARG SEQRES 9 A 372 ASP PHE TRP ASP GLY PHE GLU ILE ILE CYS LYS ARG LEU SEQRES 10 A 372 ARG SER GLU ASP GLY GLN PRO MET VAL LEU LYS LEU LYS SEQRES 11 A 372 ASP TRP PRO PRO GLY GLU ASP PHE ARG ASP MET MET PRO SEQRES 12 A 372 THR ARG PHE GLU ASP LEU MET GLU ASN LEU PRO LEU PRO SEQRES 13 A 372 GLU TYR THR LYS ARG ASP GLY ARG LEU ASN LEU ALA SER SEQRES 14 A 372 ARG LEU PRO SER TYR PHE VAL ARG PRO ASP LEU GLY PRO SEQRES 15 A 372 LYS MET TYR ASN ALA TYR GLY LEU ILE THR ALA GLU ASP SEQRES 16 A 372 ARG ARG VAL GLY THR THR ASN LEU HIS LEU ASP VAL SER SEQRES 17 A 372 ASP ALA VAL ASN VAL MET VAL TYR VAL GLY ILE PRO ILE SEQRES 18 A 372 GLY GLU GLY ALA HIS ASP GLU GLU VAL LEU LYS THR ILE SEQRES 19 A 372 ASP GLU GLY ASP ALA ASP GLU VAL THR LYS GLU ARG ILE SEQRES 20 A 372 HIS ASP HIS LYS GLU LYS PRO GLY ALA LEU TRP HIS ILE SEQRES 21 A 372 TYR ALA ALA LYS ASP ALA GLU LYS ILE ARG GLU LEU LEU SEQRES 22 A 372 ARG LYS VAL GLY GLU GLU GLN GLY GLN GLU ASN PRO PRO SEQRES 23 A 372 ASP HIS ASP PRO ILE HIS ASP GLN SER TRP TYR LEU ASP SEQRES 24 A 372 GLN THR LEU ARG LYS ARG LEU TYR GLU GLU TYR GLY VAL SEQRES 25 A 372 GLN GLY TRP ALA ILE VAL GLN PHE LEU GLY ASP ALA VAL SEQRES 26 A 372 PHE ILE PRO ALA GLY ALA PRO HIS GLN VAL HIS ASN LEU SEQRES 27 A 372 TYR SER CYS ILE LYS VAL ALA GLU ASP PHE VAL SER PRO SEQRES 28 A 372 GLU HIS VAL LYS HIS CYS PHE ARG LEU THR GLN GLU PHE SEQRES 29 A 372 ARG HIS LEU SER ASN THR HIS THR SEQRES 1 B 372 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 372 GLY THR GLU ASN LEU TYR PHE GLN SER MET THR SER HIS SEQRES 3 B 372 SER TRP LEU CYS ASP GLY ARG LEU LEU CYS LEU HIS ASP SEQRES 4 B 372 PRO SER ASN LYS ASN ASN TRP LYS ILE PHE ARG GLU CYS SEQRES 5 B 372 TRP LYS GLN GLY GLN PRO VAL LEU VAL SER GLY VAL HIS SEQRES 6 B 372 LYS LYS LEU LYS SER GLU LEU TRP LYS PRO GLU ALA PHE SEQRES 7 B 372 SER GLN GLU PHE GLY ASP GLN ASP VAL ASP LEU VAL ASN SEQRES 8 B 372 CYS ARG ASN CYS ALA ILE ILE SER ASP VAL LYS VAL ARG SEQRES 9 B 372 ASP PHE TRP ASP GLY PHE GLU ILE ILE CYS LYS ARG LEU SEQRES 10 B 372 ARG SER GLU ASP GLY GLN PRO MET VAL LEU LYS LEU LYS SEQRES 11 B 372 ASP TRP PRO PRO GLY GLU ASP PHE ARG ASP MET MET PRO SEQRES 12 B 372 THR ARG PHE GLU ASP LEU MET GLU ASN LEU PRO LEU PRO SEQRES 13 B 372 GLU TYR THR LYS ARG ASP GLY ARG LEU ASN LEU ALA SER SEQRES 14 B 372 ARG LEU PRO SER TYR PHE VAL ARG PRO ASP LEU GLY PRO SEQRES 15 B 372 LYS MET TYR ASN ALA TYR GLY LEU ILE THR ALA GLU ASP SEQRES 16 B 372 ARG ARG VAL GLY THR THR ASN LEU HIS LEU ASP VAL SER SEQRES 17 B 372 ASP ALA VAL ASN VAL MET VAL TYR VAL GLY ILE PRO ILE SEQRES 18 B 372 GLY GLU GLY ALA HIS ASP GLU GLU VAL LEU LYS THR ILE SEQRES 19 B 372 ASP GLU GLY ASP ALA ASP GLU VAL THR LYS GLU ARG ILE SEQRES 20 B 372 HIS ASP HIS LYS GLU LYS PRO GLY ALA LEU TRP HIS ILE SEQRES 21 B 372 TYR ALA ALA LYS ASP ALA GLU LYS ILE ARG GLU LEU LEU SEQRES 22 B 372 ARG LYS VAL GLY GLU GLU GLN GLY GLN GLU ASN PRO PRO SEQRES 23 B 372 ASP HIS ASP PRO ILE HIS ASP GLN SER TRP TYR LEU ASP SEQRES 24 B 372 GLN THR LEU ARG LYS ARG LEU TYR GLU GLU TYR GLY VAL SEQRES 25 B 372 GLN GLY TRP ALA ILE VAL GLN PHE LEU GLY ASP ALA VAL SEQRES 26 B 372 PHE ILE PRO ALA GLY ALA PRO HIS GLN VAL HIS ASN LEU SEQRES 27 B 372 TYR SER CYS ILE LYS VAL ALA GLU ASP PHE VAL SER PRO SEQRES 28 B 372 GLU HIS VAL LYS HIS CYS PHE ARG LEU THR GLN GLU PHE SEQRES 29 B 372 ARG HIS LEU SER ASN THR HIS THR HET S3M A1801 14 HET CL A1802 1 HET CL A1803 1 HET CL A1804 1 HET CL A1805 1 HET MN A1806 1 HET CL B1801 1 HET MN B1802 1 HETNAM S3M (1-METHYL-5-PHENYL-PYRAZOL-3-YL)METHANOL HETNAM CL CHLORIDE ION HETNAM MN MANGANESE (II) ION FORMUL 3 S3M C11 H12 N2 O FORMUL 4 CL 5(CL 1-) FORMUL 8 MN 2(MN 2+) FORMUL 11 HOH *684(H2 O) HELIX 1 AA1 CYS A 1386 ARG A 1389 5 4 HELIX 2 AA2 ASN A 1400 GLN A 1411 1 12 HELIX 3 AA3 GLY A 1419 LEU A 1424 5 6 HELIX 4 AA4 LYS A 1425 TRP A 1429 5 5 HELIX 5 AA5 LYS A 1430 GLY A 1439 1 10 HELIX 6 AA6 VAL A 1459 ASP A 1464 1 6 HELIX 7 AA7 ILE A 1468 ARG A 1472 5 5 HELIX 8 AA8 ASP A 1493 MET A 1498 1 6 HELIX 9 AA9 MET A 1498 GLU A 1507 1 10 HELIX 10 AB1 LEU A 1511 LYS A 1516 1 6 HELIX 11 AB2 LEU A 1523 LEU A 1527 5 5 HELIX 12 AB3 ALA A 1549 VAL A 1554 5 6 HELIX 13 AB4 ASP A 1583 GLY A 1593 1 11 HELIX 14 AB5 ASP A 1596 ASP A 1605 1 10 HELIX 15 AB6 ALA A 1618 LYS A 1620 5 3 HELIX 16 AB7 ASP A 1621 GLN A 1636 1 16 HELIX 17 AB8 ASP A 1655 GLY A 1667 1 13 HELIX 18 AB9 SER A 1706 PHE A 1714 5 9 HELIX 19 AC1 ASN B 1401 GLN B 1411 1 11 HELIX 20 AC2 GLY B 1419 LEU B 1424 5 6 HELIX 21 AC3 LYS B 1425 TRP B 1429 5 5 HELIX 22 AC4 LYS B 1430 GLY B 1439 1 10 HELIX 23 AC5 VAL B 1459 GLY B 1465 1 7 HELIX 24 AC6 ILE B 1468 ARG B 1472 5 5 HELIX 25 AC7 ASP B 1493 MET B 1498 1 6 HELIX 26 AC8 MET B 1498 GLU B 1507 1 10 HELIX 27 AC9 LEU B 1511 LYS B 1516 1 6 HELIX 28 AD1 ALA B 1549 VAL B 1554 5 6 HELIX 29 AD2 ASP B 1583 GLY B 1593 1 11 HELIX 30 AD3 ASP B 1596 HIS B 1606 1 11 HELIX 31 AD4 ALA B 1618 LYS B 1620 5 3 HELIX 32 AD5 ASP B 1621 GLN B 1636 1 16 HELIX 33 AD6 ASP B 1655 GLY B 1667 1 13 HELIX 34 AD7 SER B 1706 GLU B 1708 5 3 HELIX 35 AD8 HIS B 1709 ASN B 1725 1 17 SHEET 1 AA110 HIS A1382 LEU A1385 0 SHEET 2 AA110 LEU A1390 LEU A1393 -1 O CYS A1392 N SER A1383 SHEET 3 AA110 VAL A1415 VAL A1417 1 O LEU A1416 N LEU A1391 SHEET 4 AA110 ALA A1680 ILE A1683 -1 O PHE A1682 N VAL A1415 SHEET 5 AA110 ASP A1565 GLY A1574 -1 N ALA A1566 O ILE A1683 SHEET 6 AA110 SER A1696 PHE A1704 -1 O SER A1696 N GLY A1574 SHEET 7 AA110 LYS A1539 ALA A1543 -1 N LYS A1539 O ALA A1701 SHEET 8 AA110 LEU A1483 LEU A1485 -1 N LEU A1485 O ASN A1542 SHEET 9 AA110 ASP A1442 ASN A1447 -1 N VAL A1446 O LYS A1484 SHEET 10 AA110 ILE A1453 LYS A1458 -1 O VAL A1457 N VAL A1443 SHEET 1 AA2 4 THR A1557 HIS A1560 0 SHEET 2 AA2 4 HIS A1689 ASN A1693 -1 O HIS A1689 N HIS A1560 SHEET 3 AA2 4 PRO A1610 ILE A1616 -1 N LEU A1613 O HIS A1692 SHEET 4 AA2 4 TRP A1671 PHE A1676 -1 O ILE A1673 N TRP A1614 SHEET 1 AA3 7 HIS B1382 LEU B1385 0 SHEET 2 AA3 7 LEU B1390 LEU B1393 -1 O CYS B1392 N SER B1383 SHEET 3 AA3 7 VAL B1415 VAL B1417 1 O LEU B1416 N LEU B1393 SHEET 4 AA3 7 ALA B1680 ILE B1683 -1 O ALA B1680 N VAL B1417 SHEET 5 AA3 7 ASP B1565 GLY B1574 -1 N ASN B1568 O VAL B1681 SHEET 6 AA3 7 SER B1696 PHE B1704 -1 O VAL B1700 N VAL B1569 SHEET 7 AA3 7 LYS B1539 ALA B1543 -1 N LYS B1539 O ALA B1701 SHEET 1 AA4 3 ILE B1453 LYS B1458 0 SHEET 2 AA4 3 ASP B1442 ASN B1447 -1 N LEU B1445 O ILE B1454 SHEET 3 AA4 3 LEU B1483 LEU B1485 -1 O LYS B1484 N VAL B1446 SHEET 1 AA5 4 THR B1557 HIS B1560 0 SHEET 2 AA5 4 HIS B1689 ASN B1693 -1 O VAL B1691 N THR B1557 SHEET 3 AA5 4 PRO B1610 ILE B1616 -1 N LEU B1613 O HIS B1692 SHEET 4 AA5 4 TRP B1671 PHE B1676 -1 O ILE B1673 N TRP B1614 LINK NE2 HIS A1560 MN MN A1806 1555 1555 2.03 LINK OD2 ASP A1562 MN MN A1806 1555 1555 2.18 LINK NE2 HIS A1689 MN MN A1806 1555 1555 2.14 LINK NE2 HIS B1560 MN MN B1802 1555 1555 2.10 LINK OD2 ASP B1562 MN MN B1802 1555 1555 2.08 LINK NE2 HIS B1689 MN MN B1802 1555 1555 2.09 CISPEP 1 TRP A 1488 PRO A 1489 0 -16.15 CISPEP 2 GLY A 1537 PRO A 1538 0 -9.98 CISPEP 3 TRP B 1488 PRO B 1489 0 -11.74 SITE 1 AC1 5 THR A1380 SER A1381 HIS A1394 ASP A1395 SITE 2 AC1 5 HOH A1989 SITE 1 AC2 2 LEU A1511 GLU A1513 SITE 1 AC3 3 MET A1498 THR A1500 ARG A1501 SITE 1 AC4 3 LYS A1484 ASN A1558 GLN A1650 SITE 1 AC5 3 HIS A1712 HOH A2134 HOH A2233 SITE 1 AC6 3 HIS A1560 ASP A1562 HIS A1689 SITE 1 AC7 4 MET B1498 PRO B1499 THR B1500 ARG B1501 SITE 1 AC8 3 HIS B1560 ASP B1562 HIS B1689 CRYST1 57.520 93.540 93.681 90.00 108.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017385 0.000000 0.005707 0.00000 SCALE2 0.000000 0.010691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011235 0.00000