data_5RD8 # _entry.id 5RD8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.328 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5RD8 WWPDB D_1001403072 # _pdbx_database_status.entry_id 5RD8 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-03-24 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.pdbx_ordinal _audit_author.name 1 'Weiss, M.S.' 2 'Wollenhaupt, J.' 3 'Metz, A.' 4 'Barthel, T.' 5 'Lima, G.M.A.' 6 'Heine, A.' 7 'Mueller, U.' 8 'Klebe, G.' # _citation.id primary _citation.title 'F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.' _citation.journal_abbrev Structure _citation.journal_volume 28 _citation.page_first 694 _citation.page_last 706.e5 _citation.year 2020 _citation.pdbx_database_id_PubMed 32413289 _citation.pdbx_database_id_DOI 10.1016/j.str.2020.04.019 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wollenhaupt, J.' 1 ? primary 'Metz, A.' 2 ? primary 'Barthel, T.' 3 ? primary 'Lima, G.M.A.' 4 ? primary 'Heine, A.' 5 ? primary 'Mueller, U.' 6 ? primary 'Klebe, G.' 7 ? primary 'Weiss, M.S.' 8 ? # _cell.entry_id 5RD8 _cell.length_a 45.202 _cell.length_b 72.978 _cell.length_c 52.357 _cell.angle_alpha 90.000 _cell.angle_beta 109.170 _cell.angle_gamma 90.000 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RD8 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Endothiapepsin 43278.664 1 3.4.23.22 ? ? ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 5 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 8 water nat water 18.015 334 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Aspartate protease' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSSPLKNALVTAMLAGGALSSPTKQHVGIPVNASPEVGPGKYSFKQVRNPNYKFNGPLSVKKTYLKYGVPIPAWLEDAVQ NSTSGLAERSTGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLS GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV VSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALK AAFVVFNGATTPTLGFASK ; _entity_poly.pdbx_seq_one_letter_code_can ;MSSPLKNALVTAMLAGGALSSPTKQHVGIPVNASPEVGPGKYSFKQVRNPNYKFNGPLSVKKTYLKYGVPIPAWLEDAVQ NSTSGLAERSTGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLS GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV VSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALK AAFVVFNGATTPTLGFASK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 SER n 1 4 PRO n 1 5 LEU n 1 6 LYS n 1 7 ASN n 1 8 ALA n 1 9 LEU n 1 10 VAL n 1 11 THR n 1 12 ALA n 1 13 MET n 1 14 LEU n 1 15 ALA n 1 16 GLY n 1 17 GLY n 1 18 ALA n 1 19 LEU n 1 20 SER n 1 21 SER n 1 22 PRO n 1 23 THR n 1 24 LYS n 1 25 GLN n 1 26 HIS n 1 27 VAL n 1 28 GLY n 1 29 ILE n 1 30 PRO n 1 31 VAL n 1 32 ASN n 1 33 ALA n 1 34 SER n 1 35 PRO n 1 36 GLU n 1 37 VAL n 1 38 GLY n 1 39 PRO n 1 40 GLY n 1 41 LYS n 1 42 TYR n 1 43 SER n 1 44 PHE n 1 45 LYS n 1 46 GLN n 1 47 VAL n 1 48 ARG n 1 49 ASN n 1 50 PRO n 1 51 ASN n 1 52 TYR n 1 53 LYS n 1 54 PHE n 1 55 ASN n 1 56 GLY n 1 57 PRO n 1 58 LEU n 1 59 SER n 1 60 VAL n 1 61 LYS n 1 62 LYS n 1 63 THR n 1 64 TYR n 1 65 LEU n 1 66 LYS n 1 67 TYR n 1 68 GLY n 1 69 VAL n 1 70 PRO n 1 71 ILE n 1 72 PRO n 1 73 ALA n 1 74 TRP n 1 75 LEU n 1 76 GLU n 1 77 ASP n 1 78 ALA n 1 79 VAL n 1 80 GLN n 1 81 ASN n 1 82 SER n 1 83 THR n 1 84 SER n 1 85 GLY n 1 86 LEU n 1 87 ALA n 1 88 GLU n 1 89 ARG n 1 90 SER n 1 91 THR n 1 92 GLY n 1 93 SER n 1 94 ALA n 1 95 THR n 1 96 THR n 1 97 THR n 1 98 PRO n 1 99 ILE n 1 100 ASP n 1 101 SER n 1 102 LEU n 1 103 ASP n 1 104 ASP n 1 105 ALA n 1 106 TYR n 1 107 ILE n 1 108 THR n 1 109 PRO n 1 110 VAL n 1 111 GLN n 1 112 ILE n 1 113 GLY n 1 114 THR n 1 115 PRO n 1 116 ALA n 1 117 GLN n 1 118 THR n 1 119 LEU n 1 120 ASN n 1 121 LEU n 1 122 ASP n 1 123 PHE n 1 124 ASP n 1 125 THR n 1 126 GLY n 1 127 SER n 1 128 SER n 1 129 ASP n 1 130 LEU n 1 131 TRP n 1 132 VAL n 1 133 PHE n 1 134 SER n 1 135 SER n 1 136 GLU n 1 137 THR n 1 138 THR n 1 139 ALA n 1 140 SER n 1 141 GLU n 1 142 VAL n 1 143 ASP n 1 144 GLY n 1 145 GLN n 1 146 THR n 1 147 ILE n 1 148 TYR n 1 149 THR n 1 150 PRO n 1 151 SER n 1 152 LYS n 1 153 SER n 1 154 THR n 1 155 THR n 1 156 ALA n 1 157 LYS n 1 158 LEU n 1 159 LEU n 1 160 SER n 1 161 GLY n 1 162 ALA n 1 163 THR n 1 164 TRP n 1 165 SER n 1 166 ILE n 1 167 SER n 1 168 TYR n 1 169 GLY n 1 170 ASP n 1 171 GLY n 1 172 SER n 1 173 SER n 1 174 SER n 1 175 SER n 1 176 GLY n 1 177 ASP n 1 178 VAL n 1 179 TYR n 1 180 THR n 1 181 ASP n 1 182 THR n 1 183 VAL n 1 184 SER n 1 185 VAL n 1 186 GLY n 1 187 GLY n 1 188 LEU n 1 189 THR n 1 190 VAL n 1 191 THR n 1 192 GLY n 1 193 GLN n 1 194 ALA n 1 195 VAL n 1 196 GLU n 1 197 SER n 1 198 ALA n 1 199 LYS n 1 200 LYS n 1 201 VAL n 1 202 SER n 1 203 SER n 1 204 SER n 1 205 PHE n 1 206 THR n 1 207 GLU n 1 208 ASP n 1 209 SER n 1 210 THR n 1 211 ILE n 1 212 ASP n 1 213 GLY n 1 214 LEU n 1 215 LEU n 1 216 GLY n 1 217 LEU n 1 218 ALA n 1 219 PHE n 1 220 SER n 1 221 THR n 1 222 LEU n 1 223 ASN n 1 224 THR n 1 225 VAL n 1 226 SER n 1 227 PRO n 1 228 THR n 1 229 GLN n 1 230 GLN n 1 231 LYS n 1 232 THR n 1 233 PHE n 1 234 PHE n 1 235 ASP n 1 236 ASN n 1 237 ALA n 1 238 LYS n 1 239 ALA n 1 240 SER n 1 241 LEU n 1 242 ASP n 1 243 SER n 1 244 PRO n 1 245 VAL n 1 246 PHE n 1 247 THR n 1 248 ALA n 1 249 ASP n 1 250 LEU n 1 251 GLY n 1 252 TYR n 1 253 HIS n 1 254 ALA n 1 255 PRO n 1 256 GLY n 1 257 THR n 1 258 TYR n 1 259 ASN n 1 260 PHE n 1 261 GLY n 1 262 PHE n 1 263 ILE n 1 264 ASP n 1 265 THR n 1 266 THR n 1 267 ALA n 1 268 TYR n 1 269 THR n 1 270 GLY n 1 271 SER n 1 272 ILE n 1 273 THR n 1 274 TYR n 1 275 THR n 1 276 ALA n 1 277 VAL n 1 278 SER n 1 279 THR n 1 280 LYS n 1 281 GLN n 1 282 GLY n 1 283 PHE n 1 284 TRP n 1 285 GLU n 1 286 TRP n 1 287 THR n 1 288 SER n 1 289 THR n 1 290 GLY n 1 291 TYR n 1 292 ALA n 1 293 VAL n 1 294 GLY n 1 295 SER n 1 296 GLY n 1 297 THR n 1 298 PHE n 1 299 LYS n 1 300 SER n 1 301 THR n 1 302 SER n 1 303 ILE n 1 304 ASP n 1 305 GLY n 1 306 ILE n 1 307 ALA n 1 308 ASP n 1 309 THR n 1 310 GLY n 1 311 THR n 1 312 THR n 1 313 LEU n 1 314 LEU n 1 315 TYR n 1 316 LEU n 1 317 PRO n 1 318 ALA n 1 319 THR n 1 320 VAL n 1 321 VAL n 1 322 SER n 1 323 ALA n 1 324 TYR n 1 325 TRP n 1 326 ALA n 1 327 GLN n 1 328 VAL n 1 329 SER n 1 330 GLY n 1 331 ALA n 1 332 LYS n 1 333 SER n 1 334 SER n 1 335 SER n 1 336 SER n 1 337 VAL n 1 338 GLY n 1 339 GLY n 1 340 TYR n 1 341 VAL n 1 342 PHE n 1 343 PRO n 1 344 CYS n 1 345 SER n 1 346 ALA n 1 347 THR n 1 348 LEU n 1 349 PRO n 1 350 SER n 1 351 PHE n 1 352 THR n 1 353 PHE n 1 354 GLY n 1 355 VAL n 1 356 GLY n 1 357 SER n 1 358 ALA n 1 359 ARG n 1 360 ILE n 1 361 VAL n 1 362 ILE n 1 363 PRO n 1 364 GLY n 1 365 ASP n 1 366 TYR n 1 367 ILE n 1 368 ASP n 1 369 PHE n 1 370 GLY n 1 371 PRO n 1 372 ILE n 1 373 SER n 1 374 THR n 1 375 GLY n 1 376 SER n 1 377 SER n 1 378 SER n 1 379 CYS n 1 380 PHE n 1 381 GLY n 1 382 GLY n 1 383 ILE n 1 384 GLN n 1 385 SER n 1 386 SER n 1 387 ALA n 1 388 GLY n 1 389 ILE n 1 390 GLY n 1 391 ILE n 1 392 ASN n 1 393 ILE n 1 394 PHE n 1 395 GLY n 1 396 ASP n 1 397 VAL n 1 398 ALA n 1 399 LEU n 1 400 LYS n 1 401 ALA n 1 402 ALA n 1 403 PHE n 1 404 VAL n 1 405 VAL n 1 406 PHE n 1 407 ASN n 1 408 GLY n 1 409 ALA n 1 410 THR n 1 411 THR n 1 412 PRO n 1 413 THR n 1 414 LEU n 1 415 GLY n 1 416 PHE n 1 417 ALA n 1 418 SER n 1 419 LYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 419 _entity_src_nat.common_name 'Chestnut blight fungus' _entity_src_nat.pdbx_organism_scientific 'Cryphonectria parasitica' _entity_src_nat.pdbx_ncbi_taxonomy_id 5116 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CARP_CRYPA _struct_ref.pdbx_db_accession P11838 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSSPLKNALVTAMLAGGALSSPTKQHVGIPVNASPEVGPGKYSFKQVRNPNYKFNGPLSVKKTYLKYGVPIPAWLEDAVQ NSTSGLAERSTGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLS GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV VSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALK AAFVVFNGATTPTLGFASK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5RD8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 419 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11838 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 419 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -88 _struct_ref_seq.pdbx_auth_seq_align_end 330 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 5RD8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_percent_sol 34.74 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 290 _exptl_crystal_grow.pdbx_details '0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.pdbx_collection_date 2019-03-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.827 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX IV BEAMLINE BioMAX' _diffrn_source.pdbx_wavelength_list 0.827 _diffrn_source.pdbx_synchrotron_site 'MAX IV' _diffrn_source.pdbx_synchrotron_beamline BioMAX _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5RD8 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.360 _reflns.d_resolution_high 0.98 _reflns.number_obs 170022 _reflns.number_all ? _reflns.percent_possible_obs 96.700 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.780 _reflns.B_iso_Wilson_estimate 15.302 _reflns.pdbx_redundancy 6.519 _reflns.pdbx_Rrim_I_all 0.056 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_CC_half 0.999 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 1167541 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared 1.232 _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 0.98 1.04 123769 ? 24175 628 1.992 0.69 ? ? 4.14 ? ? ? 29883 ? ? ? ? 0.809 2.216 ? 0.294 1 2 1.04 1.11 186220 ? 28045 50 0.962 1.80 ? ? 6.63 ? ? ? 28076 ? ? ? ? 0.999 1.047 ? 0.712 1 3 1.11 1.20 176185 ? 26138 0 0.466 3.94 ? ? 6.74 ? ? ? 26159 ? ? ? ? 0.999 0.506 ? 0.915 1 4 1.20 1.31 164567 ? 23997 0 0.291 6.39 ? ? 6.85 ? ? ? 24011 ? ? ? ? 0.999 0.315 ? 0.965 1 5 1.31 1.47 148341 ? 21792 0 0.167 11.17 ? ? 6.80 ? ? ? 21818 ? ? ? ? 0.999 0.181 ? 0.988 1 6 1.47 1.69 127448 ? 19226 20 0.092 20.02 ? ? 6.62 ? ? ? 19247 ? ? ? ? 0.999 0.100 ? 0.995 1 7 1.69 2.07 109961 ? 16231 7 0.050 34.85 ? ? 6.76 ? ? ? 16259 ? ? ? ? 0.998 0.054 ? 0.998 1 8 2.07 2.93 85203 ? 12601 0 0.036 46.65 ? ? 6.74 ? ? ? 12633 ? ? ? ? 0.997 0.039 ? 0.999 1 9 2.93 50.00 45847 ? 6907 73 0.031 52.50 ? ? 6.50 ? ? ? 7055 ? ? ? ? 0.979 0.034 ? 0.999 # _refine.entry_id 5RD8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 0.9800 _refine.ls_d_res_low 39.3600 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.8200 _refine.ls_number_reflns_obs 170022 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1515 _refine.ls_R_factor_R_work 0.15120 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.15152 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 9090 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 13.2000 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0500 _refine.aniso_B[2][2] 0.0600 _refine.aniso_B[3][3] 0.1900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.3400 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9810 _refine.correlation_coeff_Fo_to_Fc_free 0.9810 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0200 _refine.pdbx_overall_ESU_R_Free 0.0210 _refine.overall_SU_ML 0.0180 _refine.overall_SU_B 0.3720 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 78.070 _refine.B_iso_min 8.060 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 0.9800 _refine_hist.d_res_low 39.3600 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 341 _refine_hist.number_atoms_total 2773 _refine_hist.pdbx_number_residues_total 330 _refine_hist.pdbx_B_iso_mean_ligand 39.36 _refine_hist.pdbx_B_iso_mean_solvent 28.59 _refine_hist.pdbx_number_atoms_protein 2369 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 2590 0.019 0.013 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 2260 0.001 0.017 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3557 1.953 1.636 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 5277 1.637 1.559 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 365 6.833 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 84 30.180 24.881 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 339 8.690 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 1 17.384 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 377 0.113 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2986 0.010 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 529 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1381 1.143 1.203 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1378 1.140 1.200 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1738 1.620 1.815 ? ? # _refine_ls_shell.d_res_high 0.977 _refine_ls_shell.d_res_low 1.002 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 71.5000 _refine_ls_shell.number_reflns_R_work 9299 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.15120 _refine_ls_shell.R_factor_R_free 0.15152 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 9090 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.number_reflns_all 18389 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5RD8 _struct.title 'PanDDA analysis group deposition -- Endothiapepsin ground state model 30' _struct.pdbx_descriptor 'Endothiapepsin (E.C.3.4.23.22)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5RD8 _struct_keywords.text 'FragMAX, FragMAXapp, fragment screening, hydrolase, inhibition, F2X-Entry' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 7 ? K N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 138 ? VAL A 142 ? THR A 49 VAL A 53 5 ? 5 HELX_P HELX_P2 AA2 THR A 149 ? SER A 153 ? THR A 60 SER A 64 5 ? 5 HELX_P HELX_P3 AA3 SER A 202 ? GLU A 207 ? SER A 113 GLU A 118 1 ? 6 HELX_P HELX_P4 AA4 PHE A 219 ? ASN A 223 ? PHE A 130 ASN A 134 5 ? 5 HELX_P HELX_P5 AA5 THR A 232 ? LYS A 238 ? THR A 143 LYS A 149 1 ? 7 HELX_P HELX_P6 AA6 PRO A 317 ? ALA A 326 ? PRO A 228 ALA A 237 1 ? 10 HELX_P HELX_P7 AA7 PRO A 363 ? TYR A 366 ? PRO A 274 TYR A 277 5 ? 4 HELX_P HELX_P8 AA8 GLY A 395 ? LYS A 400 ? GLY A 306 LYS A 311 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 344 SG ? ? ? 1_555 A CYS 379 SG ? ? A CYS 255 A CYS 290 1_555 ? ? ? ? ? ? ? 2.052 ? metalc1 metalc ? ? H PG4 . O2 ? ? ? 1_555 I NA . NA ? ? A PG4 407 A NA 408 1_555 ? ? ? ? ? ? ? 3.074 ? metalc2 metalc ? ? H PG4 . O4 ? ? ? 1_555 I NA . NA ? ? A PG4 407 A NA 408 1_555 ? ? ? ? ? ? ? 3.016 ? metalc3 metalc ? ? H PG4 . O5 ? ? ? 1_555 I NA . NA ? ? A PG4 407 A NA 408 1_555 ? ? ? ? ? ? ? 2.901 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 114 A . ? THR 25 A PRO 115 A ? PRO 26 A 1 -7.05 2 SER 226 A . ? SER 137 A PRO 227 A ? PRO 138 A 1 3.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 13 ? AA3 ? 7 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel AA2 9 10 ? anti-parallel AA2 10 11 ? anti-parallel AA2 11 12 ? anti-parallel AA2 12 13 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? parallel AA3 5 6 ? anti-parallel AA3 6 7 ? parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 157 ? SER A 167 ? LYS A 68 SER A 78 AA1 2 SER A 173 ? VAL A 185 ? SER A 84 VAL A 96 AA1 3 TYR A 106 ? ILE A 112 ? TYR A 17 ILE A 23 AA1 4 GLY A 92 ? PRO A 98 ? GLY A 3 PRO A 9 AA1 5 GLY A 256 ? PHE A 260 ? GLY A 167 PHE A 171 AA1 6 VAL A 245 ? ASP A 249 ? VAL A 156 ASP A 160 AA1 7 PHE A 403 ? ASN A 407 ? PHE A 314 ASN A 318 AA1 8 THR A 413 ? ALA A 417 ? THR A 324 ALA A 328 AA1 9 THR A 273 ? ALA A 276 ? THR A 184 ALA A 187 AA2 1 LYS A 157 ? SER A 167 ? LYS A 68 SER A 78 AA2 2 SER A 173 ? VAL A 185 ? SER A 84 VAL A 96 AA2 3 LEU A 188 ? VAL A 201 ? LEU A 99 VAL A 112 AA2 4 LEU A 130 ? VAL A 132 ? LEU A 41 VAL A 43 AA2 5 GLY A 213 ? GLY A 216 ? GLY A 124 GLY A 127 AA2 6 GLN A 117 ? ASP A 124 ? GLN A 28 ASP A 35 AA2 7 TYR A 106 ? ILE A 112 ? TYR A 17 ILE A 23 AA2 8 GLY A 92 ? PRO A 98 ? GLY A 3 PRO A 9 AA2 9 GLY A 256 ? PHE A 260 ? GLY A 167 PHE A 171 AA2 10 VAL A 245 ? ASP A 249 ? VAL A 156 ASP A 160 AA2 11 PHE A 403 ? ASN A 407 ? PHE A 314 ASN A 318 AA2 12 THR A 413 ? ALA A 417 ? THR A 324 ALA A 328 AA2 13 THR A 273 ? ALA A 276 ? THR A 184 ALA A 187 AA3 1 ALA A 358 ? ILE A 362 ? ALA A 269 ILE A 273 AA3 2 PHE A 351 ? VAL A 355 ? PHE A 262 VAL A 266 AA3 3 GLU A 285 ? VAL A 293 ? GLU A 196 VAL A 204 AA3 4 LYS A 299 ? ALA A 307 ? LYS A 210 ALA A 218 AA3 5 ASN A 392 ? PHE A 394 ? ASN A 303 PHE A 305 AA3 6 LEU A 314 ? LEU A 316 ? LEU A 225 LEU A 227 AA3 7 ILE A 383 ? SER A 385 ? ILE A 294 SER A 296 AA4 1 LYS A 332 ? SER A 334 ? LYS A 243 SER A 245 AA4 2 GLY A 339 ? PRO A 343 ? GLY A 250 PRO A 254 AA4 3 SER A 378 ? GLY A 381 ? SER A 289 GLY A 292 AA4 4 ASP A 368 ? PRO A 371 ? ASP A 279 PRO A 282 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 159 ? N LEU A 70 O VAL A 178 ? O VAL A 89 AA1 2 3 O SER A 184 ? O SER A 95 N GLN A 111 ? N GLN A 22 AA1 3 4 O ILE A 107 ? O ILE A 18 N THR A 97 ? N THR A 8 AA1 4 5 N GLY A 92 ? N GLY A 3 O PHE A 260 ? O PHE A 171 AA1 5 6 O ASN A 259 ? O ASN A 170 N THR A 247 ? N THR A 158 AA1 6 7 N PHE A 246 ? N PHE A 157 O PHE A 406 ? O PHE A 317 AA1 7 8 N VAL A 405 ? N VAL A 316 O GLY A 415 ? O GLY A 326 AA1 8 9 O LEU A 414 ? O LEU A 325 N THR A 275 ? N THR A 186 AA2 1 2 N LEU A 159 ? N LEU A 70 O VAL A 178 ? O VAL A 89 AA2 2 3 N TYR A 179 ? N TYR A 90 O VAL A 195 ? O VAL A 106 AA2 3 4 O GLU A 196 ? O GLU A 107 N LEU A 130 ? N LEU A 41 AA2 4 5 N TRP A 131 ? N TRP A 42 O LEU A 214 ? O LEU A 125 AA2 5 6 O LEU A 215 ? O LEU A 126 N ASP A 124 ? N ASP A 35 AA2 6 7 O GLN A 117 ? O GLN A 28 N ILE A 112 ? N ILE A 23 AA2 7 8 O ILE A 107 ? O ILE A 18 N THR A 97 ? N THR A 8 AA2 8 9 N GLY A 92 ? N GLY A 3 O PHE A 260 ? O PHE A 171 AA2 9 10 O ASN A 259 ? O ASN A 170 N THR A 247 ? N THR A 158 AA2 10 11 N PHE A 246 ? N PHE A 157 O PHE A 406 ? O PHE A 317 AA2 11 12 N VAL A 405 ? N VAL A 316 O GLY A 415 ? O GLY A 326 AA2 12 13 O LEU A 414 ? O LEU A 325 N THR A 275 ? N THR A 186 AA3 1 2 O ILE A 362 ? O ILE A 273 N PHE A 351 ? N PHE A 262 AA3 2 3 O THR A 352 ? O THR A 263 N ALA A 292 ? N ALA A 203 AA3 3 4 N TYR A 291 ? N TYR A 202 O LYS A 299 ? O LYS A 210 AA3 4 5 N ILE A 306 ? N ILE A 217 O PHE A 394 ? O PHE A 305 AA3 5 6 O ILE A 393 ? O ILE A 304 N TYR A 315 ? N TYR A 226 AA3 6 7 N LEU A 314 ? N LEU A 225 O GLN A 384 ? O GLN A 295 AA4 1 2 N SER A 334 ? N SER A 245 O GLY A 339 ? O GLY A 250 AA4 2 3 N PHE A 342 ? N PHE A 253 O CYS A 379 ? O CYS A 290 AA4 3 4 O PHE A 380 ? O PHE A 291 N GLY A 370 ? N GLY A 281 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 401 ? 8 'binding site for residue GOL A 401' AC2 Software A GOL 402 ? 8 'binding site for residue GOL A 402' AC3 Software A GOL 403 ? 7 'binding site for residue GOL A 403' AC4 Software A ACT 404 ? 8 'binding site for residue ACT A 404' AC5 Software A ACT 405 ? 6 'binding site for residue ACT A 405' AC6 Software A PGE 406 ? 7 'binding site for residue PGE A 406' AC7 Software A PG4 407 ? 4 'binding site for residue PG4 A 407' AC8 Software A NA 408 ? 1 'binding site for residue NA A 408' AC9 Software A PEG 409 ? 1 'binding site for residue PEG A 409' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 VAL A 361 ? VAL A 272 . ? 1_555 ? 2 AC1 8 PRO A 363 ? PRO A 274 . ? 1_555 ? 3 AC1 8 TYR A 366 ? TYR A 277 . ? 1_555 ? 4 AC1 8 ALA A 401 ? ALA A 312 . ? 1_555 ? 5 AC1 8 SER A 418 ? SER A 329 . ? 1_555 ? 6 AC1 8 LYS A 419 ? LYS A 330 . ? 1_555 ? 7 AC1 8 HOH K . ? HOH A 512 . ? 1_555 ? 8 AC1 8 HOH K . ? HOH A 643 . ? 1_555 ? 9 AC2 8 SER A 386 ? SER A 297 . ? 1_555 ? 10 AC2 8 ALA A 387 ? ALA A 298 . ? 1_555 ? 11 AC2 8 GLY A 390 ? GLY A 301 . ? 1_555 ? 12 AC2 8 ILE A 391 ? ILE A 302 . ? 1_555 ? 13 AC2 8 HOH K . ? HOH A 503 . ? 1_555 ? 14 AC2 8 HOH K . ? HOH A 524 . ? 1_555 ? 15 AC2 8 HOH K . ? HOH A 618 . ? 1_555 ? 16 AC2 8 HOH K . ? HOH A 684 . ? 1_555 ? 17 AC3 7 TRP A 325 ? TRP A 236 . ? 1_555 ? 18 AC3 7 VAL A 328 ? VAL A 239 . ? 1_555 ? 19 AC3 7 SER A 329 ? SER A 240 . ? 1_555 ? 20 AC3 7 GLY A 330 ? GLY A 241 . ? 1_555 ? 21 AC3 7 ALA A 331 ? ALA A 242 . ? 1_555 ? 22 AC3 7 HOH K . ? HOH A 511 . ? 1_555 ? 23 AC3 7 HOH K . ? HOH A 522 . ? 1_555 ? 24 AC4 8 SER A 322 ? SER A 233 . ? 1_555 ? 25 AC4 8 TYR A 340 ? TYR A 251 . ? 1_555 ? 26 AC4 8 HOH K . ? HOH A 501 . ? 1_555 ? 27 AC4 8 HOH K . ? HOH A 502 . ? 1_555 ? 28 AC4 8 HOH K . ? HOH A 511 . ? 1_555 ? 29 AC4 8 HOH K . ? HOH A 514 . ? 1_555 ? 30 AC4 8 HOH K . ? HOH A 714 . ? 1_555 ? 31 AC4 8 HOH K . ? HOH A 734 . ? 1_555 ? 32 AC5 6 CYS A 344 ? CYS A 255 . ? 1_555 ? 33 AC5 6 ASP A 368 ? ASP A 279 . ? 1_555 ? 34 AC5 6 GLY A 370 ? GLY A 281 . ? 1_555 ? 35 AC5 6 CYS A 379 ? CYS A 290 . ? 1_555 ? 36 AC5 6 HOH K . ? HOH A 509 . ? 1_555 ? 37 AC5 6 HOH K . ? HOH A 534 . ? 1_555 ? 38 AC6 7 ALA A 276 ? ALA A 187 . ? 1_555 ? 39 AC6 7 SER A 278 ? SER A 189 . ? 1_555 ? 40 AC6 7 GLU A 285 ? GLU A 196 . ? 1_555 ? 41 AC6 7 TRP A 286 ? TRP A 197 . ? 1_555 ? 42 AC6 7 THR A 287 ? THR A 198 . ? 1_555 ? 43 AC6 7 ASP A 304 ? ASP A 215 . ? 1_555 ? 44 AC6 7 HOH K . ? HOH A 753 . ? 1_555 ? 45 AC7 4 ASP A 104 ? ASP A 15 . ? 1_555 ? 46 AC7 4 PHE A 369 ? PHE A 280 . ? 1_555 ? 47 AC7 4 ILE A 372 ? ILE A 283 . ? 1_555 ? 48 AC7 4 NA I . ? NA A 408 . ? 1_555 ? 49 AC8 1 PG4 H . ? PG4 A 407 . ? 1_555 ? 50 AC9 1 SER A 335 ? SER A 246 . ? 1_555 ? # _atom_sites.entry_id 5RD8 _atom_sites.fract_transf_matrix[1][1] 0.022123 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007692 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013703 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020221 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -88 ? ? ? A . n A 1 2 SER 2 -87 ? ? ? A . n A 1 3 SER 3 -86 ? ? ? A . n A 1 4 PRO 4 -85 ? ? ? A . n A 1 5 LEU 5 -84 ? ? ? A . n A 1 6 LYS 6 -83 ? ? ? A . n A 1 7 ASN 7 -82 ? ? ? A . n A 1 8 ALA 8 -81 ? ? ? A . n A 1 9 LEU 9 -80 ? ? ? A . n A 1 10 VAL 10 -79 ? ? ? A . n A 1 11 THR 11 -78 ? ? ? A . n A 1 12 ALA 12 -77 ? ? ? A . n A 1 13 MET 13 -76 ? ? ? A . n A 1 14 LEU 14 -75 ? ? ? A . n A 1 15 ALA 15 -74 ? ? ? A . n A 1 16 GLY 16 -73 ? ? ? A . n A 1 17 GLY 17 -72 ? ? ? A . n A 1 18 ALA 18 -71 ? ? ? A . n A 1 19 LEU 19 -70 ? ? ? A . n A 1 20 SER 20 -69 ? ? ? A . n A 1 21 SER 21 -68 ? ? ? A . n A 1 22 PRO 22 -67 ? ? ? A . n A 1 23 THR 23 -66 ? ? ? A . n A 1 24 LYS 24 -65 ? ? ? A . n A 1 25 GLN 25 -64 ? ? ? A . n A 1 26 HIS 26 -63 ? ? ? A . n A 1 27 VAL 27 -62 ? ? ? A . n A 1 28 GLY 28 -61 ? ? ? A . n A 1 29 ILE 29 -60 ? ? ? A . n A 1 30 PRO 30 -59 ? ? ? A . n A 1 31 VAL 31 -58 ? ? ? A . n A 1 32 ASN 32 -57 ? ? ? A . n A 1 33 ALA 33 -56 ? ? ? A . n A 1 34 SER 34 -55 ? ? ? A . n A 1 35 PRO 35 -54 ? ? ? A . n A 1 36 GLU 36 -53 ? ? ? A . n A 1 37 VAL 37 -52 ? ? ? A . n A 1 38 GLY 38 -51 ? ? ? A . n A 1 39 PRO 39 -50 ? ? ? A . n A 1 40 GLY 40 -49 ? ? ? A . n A 1 41 LYS 41 -48 ? ? ? A . n A 1 42 TYR 42 -47 ? ? ? A . n A 1 43 SER 43 -46 ? ? ? A . n A 1 44 PHE 44 -45 ? ? ? A . n A 1 45 LYS 45 -44 ? ? ? A . n A 1 46 GLN 46 -43 ? ? ? A . n A 1 47 VAL 47 -42 ? ? ? A . n A 1 48 ARG 48 -41 ? ? ? A . n A 1 49 ASN 49 -40 ? ? ? A . n A 1 50 PRO 50 -39 ? ? ? A . n A 1 51 ASN 51 -38 ? ? ? A . n A 1 52 TYR 52 -37 ? ? ? A . n A 1 53 LYS 53 -36 ? ? ? A . n A 1 54 PHE 54 -35 ? ? ? A . n A 1 55 ASN 55 -34 ? ? ? A . n A 1 56 GLY 56 -33 ? ? ? A . n A 1 57 PRO 57 -32 ? ? ? A . n A 1 58 LEU 58 -31 ? ? ? A . n A 1 59 SER 59 -30 ? ? ? A . n A 1 60 VAL 60 -29 ? ? ? A . n A 1 61 LYS 61 -28 ? ? ? A . n A 1 62 LYS 62 -27 ? ? ? A . n A 1 63 THR 63 -26 ? ? ? A . n A 1 64 TYR 64 -25 ? ? ? A . n A 1 65 LEU 65 -24 ? ? ? A . n A 1 66 LYS 66 -23 ? ? ? A . n A 1 67 TYR 67 -22 ? ? ? A . n A 1 68 GLY 68 -21 ? ? ? A . n A 1 69 VAL 69 -20 ? ? ? A . n A 1 70 PRO 70 -19 ? ? ? A . n A 1 71 ILE 71 -18 ? ? ? A . n A 1 72 PRO 72 -17 ? ? ? A . n A 1 73 ALA 73 -16 ? ? ? A . n A 1 74 TRP 74 -15 ? ? ? A . n A 1 75 LEU 75 -14 ? ? ? A . n A 1 76 GLU 76 -13 ? ? ? A . n A 1 77 ASP 77 -12 ? ? ? A . n A 1 78 ALA 78 -11 ? ? ? A . n A 1 79 VAL 79 -10 ? ? ? A . n A 1 80 GLN 80 -9 ? ? ? A . n A 1 81 ASN 81 -8 ? ? ? A . n A 1 82 SER 82 -7 ? ? ? A . n A 1 83 THR 83 -6 ? ? ? A . n A 1 84 SER 84 -5 ? ? ? A . n A 1 85 GLY 85 -4 ? ? ? A . n A 1 86 LEU 86 -3 ? ? ? A . n A 1 87 ALA 87 -2 ? ? ? A . n A 1 88 GLU 88 -1 ? ? ? A . n A 1 89 ARG 89 0 ? ? ? A . n A 1 90 SER 90 1 1 SER SER A . n A 1 91 THR 91 2 2 THR THR A . n A 1 92 GLY 92 3 3 GLY GLY A . n A 1 93 SER 93 4 4 SER SER A . n A 1 94 ALA 94 5 5 ALA ALA A . n A 1 95 THR 95 6 6 THR THR A . n A 1 96 THR 96 7 7 THR THR A . n A 1 97 THR 97 8 8 THR THR A . n A 1 98 PRO 98 9 9 PRO PRO A . n A 1 99 ILE 99 10 10 ILE ILE A . n A 1 100 ASP 100 11 11 ASP ASP A . n A 1 101 SER 101 12 12 SER SER A . n A 1 102 LEU 102 13 13 LEU LEU A . n A 1 103 ASP 103 14 14 ASP ASP A . n A 1 104 ASP 104 15 15 ASP ASP A . n A 1 105 ALA 105 16 16 ALA ALA A . n A 1 106 TYR 106 17 17 TYR TYR A . n A 1 107 ILE 107 18 18 ILE ILE A . n A 1 108 THR 108 19 19 THR THR A . n A 1 109 PRO 109 20 20 PRO PRO A . n A 1 110 VAL 110 21 21 VAL VAL A . n A 1 111 GLN 111 22 22 GLN GLN A . n A 1 112 ILE 112 23 23 ILE ILE A . n A 1 113 GLY 113 24 24 GLY GLY A . n A 1 114 THR 114 25 25 THR THR A . n A 1 115 PRO 115 26 26 PRO PRO A . n A 1 116 ALA 116 27 27 ALA ALA A . n A 1 117 GLN 117 28 28 GLN GLN A . n A 1 118 THR 118 29 29 THR THR A . n A 1 119 LEU 119 30 30 LEU LEU A . n A 1 120 ASN 120 31 31 ASN ASN A . n A 1 121 LEU 121 32 32 LEU LEU A . n A 1 122 ASP 122 33 33 ASP ASP A . n A 1 123 PHE 123 34 34 PHE PHE A . n A 1 124 ASP 124 35 35 ASP ASP A . n A 1 125 THR 125 36 36 THR THR A . n A 1 126 GLY 126 37 37 GLY GLY A . n A 1 127 SER 127 38 38 SER SER A . n A 1 128 SER 128 39 39 SER SER A . n A 1 129 ASP 129 40 40 ASP ASP A . n A 1 130 LEU 130 41 41 LEU LEU A . n A 1 131 TRP 131 42 42 TRP TRP A . n A 1 132 VAL 132 43 43 VAL VAL A . n A 1 133 PHE 133 44 44 PHE PHE A . n A 1 134 SER 134 45 45 SER SER A . n A 1 135 SER 135 46 46 SER SER A . n A 1 136 GLU 136 47 47 GLU GLU A . n A 1 137 THR 137 48 48 THR THR A . n A 1 138 THR 138 49 49 THR THR A . n A 1 139 ALA 139 50 50 ALA ALA A . n A 1 140 SER 140 51 51 SER SER A . n A 1 141 GLU 141 52 52 GLU GLU A . n A 1 142 VAL 142 53 53 VAL VAL A . n A 1 143 ASP 143 54 54 ASP ASP A . n A 1 144 GLY 144 55 55 GLY GLY A . n A 1 145 GLN 145 56 56 GLN GLN A . n A 1 146 THR 146 57 57 THR THR A . n A 1 147 ILE 147 58 58 ILE ILE A . n A 1 148 TYR 148 59 59 TYR TYR A . n A 1 149 THR 149 60 60 THR THR A . n A 1 150 PRO 150 61 61 PRO PRO A . n A 1 151 SER 151 62 62 SER SER A . n A 1 152 LYS 152 63 63 LYS LYS A . n A 1 153 SER 153 64 64 SER SER A . n A 1 154 THR 154 65 65 THR THR A . n A 1 155 THR 155 66 66 THR THR A . n A 1 156 ALA 156 67 67 ALA ALA A . n A 1 157 LYS 157 68 68 LYS LYS A . n A 1 158 LEU 158 69 69 LEU LEU A . n A 1 159 LEU 159 70 70 LEU LEU A . n A 1 160 SER 160 71 71 SER SER A . n A 1 161 GLY 161 72 72 GLY GLY A . n A 1 162 ALA 162 73 73 ALA ALA A . n A 1 163 THR 163 74 74 THR THR A . n A 1 164 TRP 164 75 75 TRP TRP A . n A 1 165 SER 165 76 76 SER SER A . n A 1 166 ILE 166 77 77 ILE ILE A . n A 1 167 SER 167 78 78 SER SER A . n A 1 168 TYR 168 79 79 TYR TYR A . n A 1 169 GLY 169 80 80 GLY GLY A . n A 1 170 ASP 170 81 81 ASP ASP A . n A 1 171 GLY 171 82 82 GLY GLY A . n A 1 172 SER 172 83 83 SER SER A . n A 1 173 SER 173 84 84 SER SER A . n A 1 174 SER 174 85 85 SER SER A . n A 1 175 SER 175 86 86 SER SER A . n A 1 176 GLY 176 87 87 GLY GLY A . n A 1 177 ASP 177 88 88 ASP ASP A . n A 1 178 VAL 178 89 89 VAL VAL A . n A 1 179 TYR 179 90 90 TYR TYR A . n A 1 180 THR 180 91 91 THR THR A . n A 1 181 ASP 181 92 92 ASP ASP A . n A 1 182 THR 182 93 93 THR THR A . n A 1 183 VAL 183 94 94 VAL VAL A . n A 1 184 SER 184 95 95 SER SER A . n A 1 185 VAL 185 96 96 VAL VAL A . n A 1 186 GLY 186 97 97 GLY GLY A . n A 1 187 GLY 187 98 98 GLY GLY A . n A 1 188 LEU 188 99 99 LEU LEU A . n A 1 189 THR 189 100 100 THR THR A . n A 1 190 VAL 190 101 101 VAL VAL A . n A 1 191 THR 191 102 102 THR THR A . n A 1 192 GLY 192 103 103 GLY GLY A . n A 1 193 GLN 193 104 104 GLN GLN A . n A 1 194 ALA 194 105 105 ALA ALA A . n A 1 195 VAL 195 106 106 VAL VAL A . n A 1 196 GLU 196 107 107 GLU GLU A . n A 1 197 SER 197 108 108 SER SER A . n A 1 198 ALA 198 109 109 ALA ALA A . n A 1 199 LYS 199 110 110 LYS LYS A . n A 1 200 LYS 200 111 111 LYS LYS A . n A 1 201 VAL 201 112 112 VAL VAL A . n A 1 202 SER 202 113 113 SER SER A . n A 1 203 SER 203 114 114 SER SER A . n A 1 204 SER 204 115 115 SER SER A . n A 1 205 PHE 205 116 116 PHE PHE A . n A 1 206 THR 206 117 117 THR THR A . n A 1 207 GLU 207 118 118 GLU GLU A . n A 1 208 ASP 208 119 119 ASP ASP A . n A 1 209 SER 209 120 120 SER SER A . n A 1 210 THR 210 121 121 THR THR A . n A 1 211 ILE 211 122 122 ILE ILE A . n A 1 212 ASP 212 123 123 ASP ASP A . n A 1 213 GLY 213 124 124 GLY GLY A . n A 1 214 LEU 214 125 125 LEU LEU A . n A 1 215 LEU 215 126 126 LEU LEU A . n A 1 216 GLY 216 127 127 GLY GLY A . n A 1 217 LEU 217 128 128 LEU LEU A . n A 1 218 ALA 218 129 129 ALA ALA A . n A 1 219 PHE 219 130 130 PHE PHE A . n A 1 220 SER 220 131 131 SER SER A . n A 1 221 THR 221 132 132 THR THR A . n A 1 222 LEU 222 133 133 LEU LEU A . n A 1 223 ASN 223 134 134 ASN ASN A . n A 1 224 THR 224 135 135 THR THR A . n A 1 225 VAL 225 136 136 VAL VAL A . n A 1 226 SER 226 137 137 SER SER A . n A 1 227 PRO 227 138 138 PRO PRO A . n A 1 228 THR 228 139 139 THR THR A . n A 1 229 GLN 229 140 140 GLN GLN A . n A 1 230 GLN 230 141 141 GLN GLN A . n A 1 231 LYS 231 142 142 LYS LYS A . n A 1 232 THR 232 143 143 THR THR A . n A 1 233 PHE 233 144 144 PHE PHE A . n A 1 234 PHE 234 145 145 PHE PHE A . n A 1 235 ASP 235 146 146 ASP ASP A . n A 1 236 ASN 236 147 147 ASN ASN A . n A 1 237 ALA 237 148 148 ALA ALA A . n A 1 238 LYS 238 149 149 LYS LYS A . n A 1 239 ALA 239 150 150 ALA ALA A . n A 1 240 SER 240 151 151 SER SER A . n A 1 241 LEU 241 152 152 LEU LEU A . n A 1 242 ASP 242 153 153 ASP ASP A . n A 1 243 SER 243 154 154 SER SER A . n A 1 244 PRO 244 155 155 PRO PRO A . n A 1 245 VAL 245 156 156 VAL VAL A . n A 1 246 PHE 246 157 157 PHE PHE A . n A 1 247 THR 247 158 158 THR THR A . n A 1 248 ALA 248 159 159 ALA ALA A . n A 1 249 ASP 249 160 160 ASP ASP A . n A 1 250 LEU 250 161 161 LEU LEU A . n A 1 251 GLY 251 162 162 GLY GLY A . n A 1 252 TYR 252 163 163 TYR TYR A . n A 1 253 HIS 253 164 164 HIS HIS A . n A 1 254 ALA 254 165 165 ALA ALA A . n A 1 255 PRO 255 166 166 PRO PRO A . n A 1 256 GLY 256 167 167 GLY GLY A . n A 1 257 THR 257 168 168 THR THR A . n A 1 258 TYR 258 169 169 TYR TYR A . n A 1 259 ASN 259 170 170 ASN ASN A . n A 1 260 PHE 260 171 171 PHE PHE A . n A 1 261 GLY 261 172 172 GLY GLY A . n A 1 262 PHE 262 173 173 PHE PHE A . n A 1 263 ILE 263 174 174 ILE ILE A . n A 1 264 ASP 264 175 175 ASP ASP A . n A 1 265 THR 265 176 176 THR THR A . n A 1 266 THR 266 177 177 THR THR A . n A 1 267 ALA 267 178 178 ALA ALA A . n A 1 268 TYR 268 179 179 TYR TYR A . n A 1 269 THR 269 180 180 THR THR A . n A 1 270 GLY 270 181 181 GLY GLY A . n A 1 271 SER 271 182 182 SER SER A . n A 1 272 ILE 272 183 183 ILE ILE A . n A 1 273 THR 273 184 184 THR THR A . n A 1 274 TYR 274 185 185 TYR TYR A . n A 1 275 THR 275 186 186 THR THR A . n A 1 276 ALA 276 187 187 ALA ALA A . n A 1 277 VAL 277 188 188 VAL VAL A . n A 1 278 SER 278 189 189 SER SER A . n A 1 279 THR 279 190 190 THR THR A . n A 1 280 LYS 280 191 191 LYS LYS A . n A 1 281 GLN 281 192 192 GLN GLN A . n A 1 282 GLY 282 193 193 GLY GLY A . n A 1 283 PHE 283 194 194 PHE PHE A . n A 1 284 TRP 284 195 195 TRP TRP A . n A 1 285 GLU 285 196 196 GLU GLU A . n A 1 286 TRP 286 197 197 TRP TRP A . n A 1 287 THR 287 198 198 THR THR A . n A 1 288 SER 288 199 199 SER SER A . n A 1 289 THR 289 200 200 THR THR A . n A 1 290 GLY 290 201 201 GLY GLY A . n A 1 291 TYR 291 202 202 TYR TYR A . n A 1 292 ALA 292 203 203 ALA ALA A . n A 1 293 VAL 293 204 204 VAL VAL A . n A 1 294 GLY 294 205 205 GLY GLY A . n A 1 295 SER 295 206 206 SER SER A . n A 1 296 GLY 296 207 207 GLY GLY A . n A 1 297 THR 297 208 208 THR THR A . n A 1 298 PHE 298 209 209 PHE PHE A . n A 1 299 LYS 299 210 210 LYS LYS A . n A 1 300 SER 300 211 211 SER SER A . n A 1 301 THR 301 212 212 THR THR A . n A 1 302 SER 302 213 213 SER SER A . n A 1 303 ILE 303 214 214 ILE ILE A . n A 1 304 ASP 304 215 215 ASP ASP A . n A 1 305 GLY 305 216 216 GLY GLY A . n A 1 306 ILE 306 217 217 ILE ILE A . n A 1 307 ALA 307 218 218 ALA ALA A . n A 1 308 ASP 308 219 219 ASP ASP A . n A 1 309 THR 309 220 220 THR THR A . n A 1 310 GLY 310 221 221 GLY GLY A . n A 1 311 THR 311 222 222 THR THR A . n A 1 312 THR 312 223 223 THR THR A . n A 1 313 LEU 313 224 224 LEU LEU A . n A 1 314 LEU 314 225 225 LEU LEU A . n A 1 315 TYR 315 226 226 TYR TYR A . n A 1 316 LEU 316 227 227 LEU LEU A . n A 1 317 PRO 317 228 228 PRO PRO A . n A 1 318 ALA 318 229 229 ALA ALA A . n A 1 319 THR 319 230 230 THR THR A . n A 1 320 VAL 320 231 231 VAL VAL A . n A 1 321 VAL 321 232 232 VAL VAL A . n A 1 322 SER 322 233 233 SER SER A . n A 1 323 ALA 323 234 234 ALA ALA A . n A 1 324 TYR 324 235 235 TYR TYR A . n A 1 325 TRP 325 236 236 TRP TRP A . n A 1 326 ALA 326 237 237 ALA ALA A . n A 1 327 GLN 327 238 238 GLN GLN A . n A 1 328 VAL 328 239 239 VAL VAL A . n A 1 329 SER 329 240 240 SER SER A . n A 1 330 GLY 330 241 241 GLY GLY A . n A 1 331 ALA 331 242 242 ALA ALA A . n A 1 332 LYS 332 243 243 LYS LYS A . n A 1 333 SER 333 244 244 SER SER A . n A 1 334 SER 334 245 245 SER SER A . n A 1 335 SER 335 246 246 SER SER A . n A 1 336 SER 336 247 247 SER SER A . n A 1 337 VAL 337 248 248 VAL VAL A . n A 1 338 GLY 338 249 249 GLY GLY A . n A 1 339 GLY 339 250 250 GLY GLY A . n A 1 340 TYR 340 251 251 TYR TYR A . n A 1 341 VAL 341 252 252 VAL VAL A . n A 1 342 PHE 342 253 253 PHE PHE A . n A 1 343 PRO 343 254 254 PRO PRO A . n A 1 344 CYS 344 255 255 CYS CYS A . n A 1 345 SER 345 256 256 SER SER A . n A 1 346 ALA 346 257 257 ALA ALA A . n A 1 347 THR 347 258 258 THR THR A . n A 1 348 LEU 348 259 259 LEU LEU A . n A 1 349 PRO 349 260 260 PRO PRO A . n A 1 350 SER 350 261 261 SER SER A . n A 1 351 PHE 351 262 262 PHE PHE A . n A 1 352 THR 352 263 263 THR THR A . n A 1 353 PHE 353 264 264 PHE PHE A . n A 1 354 GLY 354 265 265 GLY GLY A . n A 1 355 VAL 355 266 266 VAL VAL A . n A 1 356 GLY 356 267 267 GLY GLY A . n A 1 357 SER 357 268 268 SER SER A . n A 1 358 ALA 358 269 269 ALA ALA A . n A 1 359 ARG 359 270 270 ARG ARG A . n A 1 360 ILE 360 271 271 ILE ILE A . n A 1 361 VAL 361 272 272 VAL VAL A . n A 1 362 ILE 362 273 273 ILE ILE A . n A 1 363 PRO 363 274 274 PRO PRO A . n A 1 364 GLY 364 275 275 GLY GLY A . n A 1 365 ASP 365 276 276 ASP ASP A . n A 1 366 TYR 366 277 277 TYR TYR A . n A 1 367 ILE 367 278 278 ILE ILE A . n A 1 368 ASP 368 279 279 ASP ASP A . n A 1 369 PHE 369 280 280 PHE PHE A . n A 1 370 GLY 370 281 281 GLY GLY A . n A 1 371 PRO 371 282 282 PRO PRO A . n A 1 372 ILE 372 283 283 ILE ILE A . n A 1 373 SER 373 284 284 SER SER A . n A 1 374 THR 374 285 285 THR THR A . n A 1 375 GLY 375 286 286 GLY GLY A . n A 1 376 SER 376 287 287 SER SER A . n A 1 377 SER 377 288 288 SER SER A . n A 1 378 SER 378 289 289 SER SER A . n A 1 379 CYS 379 290 290 CYS CYS A . n A 1 380 PHE 380 291 291 PHE PHE A . n A 1 381 GLY 381 292 292 GLY GLY A . n A 1 382 GLY 382 293 293 GLY GLY A . n A 1 383 ILE 383 294 294 ILE ILE A . n A 1 384 GLN 384 295 295 GLN GLN A . n A 1 385 SER 385 296 296 SER SER A . n A 1 386 SER 386 297 297 SER SER A . n A 1 387 ALA 387 298 298 ALA ALA A . n A 1 388 GLY 388 299 299 GLY GLY A . n A 1 389 ILE 389 300 300 ILE ILE A . n A 1 390 GLY 390 301 301 GLY GLY A . n A 1 391 ILE 391 302 302 ILE ILE A . n A 1 392 ASN 392 303 303 ASN ASN A . n A 1 393 ILE 393 304 304 ILE ILE A . n A 1 394 PHE 394 305 305 PHE PHE A . n A 1 395 GLY 395 306 306 GLY GLY A . n A 1 396 ASP 396 307 307 ASP ASP A . n A 1 397 VAL 397 308 308 VAL VAL A . n A 1 398 ALA 398 309 309 ALA ALA A . n A 1 399 LEU 399 310 310 LEU LEU A . n A 1 400 LYS 400 311 311 LYS LYS A . n A 1 401 ALA 401 312 312 ALA ALA A . n A 1 402 ALA 402 313 313 ALA ALA A . n A 1 403 PHE 403 314 314 PHE PHE A . n A 1 404 VAL 404 315 315 VAL VAL A . n A 1 405 VAL 405 316 316 VAL VAL A . n A 1 406 PHE 406 317 317 PHE PHE A . n A 1 407 ASN 407 318 318 ASN ASN A . n A 1 408 GLY 408 319 319 GLY GLY A . n A 1 409 ALA 409 320 320 ALA ALA A . n A 1 410 THR 410 321 321 THR THR A . n A 1 411 THR 411 322 322 THR THR A . n A 1 412 PRO 412 323 323 PRO PRO A . n A 1 413 THR 413 324 324 THR THR A . n A 1 414 LEU 414 325 325 LEU LEU A . n A 1 415 GLY 415 326 326 GLY GLY A . n A 1 416 PHE 416 327 327 PHE PHE A . n A 1 417 ALA 417 328 328 ALA ALA A . n A 1 418 SER 418 329 329 SER SER A . n A 1 419 LYS 419 330 330 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 401 401 GOL GOL A . C 2 GOL 1 402 402 GOL GOL A . D 2 GOL 1 403 403 GOL GOL A . E 3 ACT 1 404 404 ACT ACT A . F 3 ACT 1 405 405 ACT ACT A . G 4 PGE 1 406 406 PGE PGE A . H 5 PG4 1 407 407 PG4 PG4 A . I 6 NA 1 408 408 NA NA A . J 7 PEG 1 409 409 PEG PEG A . K 8 HOH 1 501 2143 HOH HOH A . K 8 HOH 2 502 1630 HOH HOH A . K 8 HOH 3 503 867 HOH HOH A . K 8 HOH 4 504 2151 HOH HOH A . K 8 HOH 5 505 897 HOH HOH A . K 8 HOH 6 506 1727 HOH HOH A . K 8 HOH 7 507 1595 HOH HOH A . K 8 HOH 8 508 2529 HOH HOH A . K 8 HOH 9 509 1325 HOH HOH A . K 8 HOH 10 510 2727 HOH HOH A . K 8 HOH 11 511 2114 HOH HOH A . K 8 HOH 12 512 1581 HOH HOH A . K 8 HOH 13 513 1894 HOH HOH A . K 8 HOH 14 514 1739 HOH HOH A . K 8 HOH 15 515 1503 HOH HOH A . K 8 HOH 16 516 1005 HOH HOH A . K 8 HOH 17 517 569 HOH HOH A . K 8 HOH 18 518 1369 HOH HOH A . K 8 HOH 19 519 1026 HOH HOH A . K 8 HOH 20 520 1979 HOH HOH A . K 8 HOH 21 521 1875 HOH HOH A . K 8 HOH 22 522 2533 HOH HOH A . K 8 HOH 23 523 1232 HOH HOH A . K 8 HOH 24 524 1091 HOH HOH A . K 8 HOH 25 525 1410 HOH HOH A . K 8 HOH 26 526 2540 HOH HOH A . K 8 HOH 27 527 2452 HOH HOH A . K 8 HOH 28 528 959 HOH HOH A . K 8 HOH 29 529 1459 HOH HOH A . K 8 HOH 30 530 1270 HOH HOH A . K 8 HOH 31 531 2679 HOH HOH A . K 8 HOH 32 532 995 HOH HOH A . K 8 HOH 33 533 883 HOH HOH A . K 8 HOH 34 534 2095 HOH HOH A . K 8 HOH 35 535 2331 HOH HOH A . K 8 HOH 36 536 2339 HOH HOH A . K 8 HOH 37 537 905 HOH HOH A . K 8 HOH 38 538 2290 HOH HOH A . K 8 HOH 39 539 1304 HOH HOH A . K 8 HOH 40 540 1958 HOH HOH A . K 8 HOH 41 541 955 HOH HOH A . K 8 HOH 42 542 733 HOH HOH A . K 8 HOH 43 543 804 HOH HOH A . K 8 HOH 44 544 1610 HOH HOH A . K 8 HOH 45 545 589 HOH HOH A . K 8 HOH 46 546 1441 HOH HOH A . K 8 HOH 47 547 1936 HOH HOH A . K 8 HOH 48 548 2057 HOH HOH A . K 8 HOH 49 549 992 HOH HOH A . K 8 HOH 50 550 1401 HOH HOH A . K 8 HOH 51 551 1210 HOH HOH A . K 8 HOH 52 552 1538 HOH HOH A . K 8 HOH 53 553 744 HOH HOH A . K 8 HOH 54 554 1594 HOH HOH A . K 8 HOH 55 555 2163 HOH HOH A . K 8 HOH 56 556 786 HOH HOH A . K 8 HOH 57 557 965 HOH HOH A . K 8 HOH 58 558 747 HOH HOH A . K 8 HOH 59 559 2102 HOH HOH A . K 8 HOH 60 560 2093 HOH HOH A . K 8 HOH 61 561 1220 HOH HOH A . K 8 HOH 62 562 1111 HOH HOH A . K 8 HOH 63 563 1014 HOH HOH A . K 8 HOH 64 564 1125 HOH HOH A . K 8 HOH 65 565 2307 HOH HOH A . K 8 HOH 66 566 1407 HOH HOH A . K 8 HOH 67 567 808 HOH HOH A . K 8 HOH 68 568 1448 HOH HOH A . K 8 HOH 69 569 835 HOH HOH A . K 8 HOH 70 570 1394 HOH HOH A . K 8 HOH 71 571 770 HOH HOH A . K 8 HOH 72 572 1282 HOH HOH A . K 8 HOH 73 573 1070 HOH HOH A . K 8 HOH 74 574 2357 HOH HOH A . K 8 HOH 75 575 1627 HOH HOH A . K 8 HOH 76 576 1124 HOH HOH A . K 8 HOH 77 577 1651 HOH HOH A . K 8 HOH 78 578 2283 HOH HOH A . K 8 HOH 79 579 1764 HOH HOH A . K 8 HOH 80 580 807 HOH HOH A . K 8 HOH 81 581 2625 HOH HOH A . K 8 HOH 82 582 1149 HOH HOH A . K 8 HOH 83 583 2085 HOH HOH A . K 8 HOH 84 584 638 HOH HOH A . K 8 HOH 85 585 896 HOH HOH A . K 8 HOH 86 586 2657 HOH HOH A . K 8 HOH 87 587 925 HOH HOH A . K 8 HOH 88 588 538 HOH HOH A . K 8 HOH 89 589 686 HOH HOH A . K 8 HOH 90 590 1782 HOH HOH A . K 8 HOH 91 591 1851 HOH HOH A . K 8 HOH 92 592 1180 HOH HOH A . K 8 HOH 93 593 612 HOH HOH A . K 8 HOH 94 594 1329 HOH HOH A . K 8 HOH 95 595 2167 HOH HOH A . K 8 HOH 96 596 971 HOH HOH A . K 8 HOH 97 597 1731 HOH HOH A . K 8 HOH 98 598 1236 HOH HOH A . K 8 HOH 99 599 877 HOH HOH A . K 8 HOH 100 600 1572 HOH HOH A . K 8 HOH 101 601 988 HOH HOH A . K 8 HOH 102 602 1593 HOH HOH A . K 8 HOH 103 603 1286 HOH HOH A . K 8 HOH 104 604 2227 HOH HOH A . K 8 HOH 105 605 1115 HOH HOH A . K 8 HOH 106 606 2354 HOH HOH A . K 8 HOH 107 607 819 HOH HOH A . K 8 HOH 108 608 1820 HOH HOH A . K 8 HOH 109 609 1244 HOH HOH A . K 8 HOH 110 610 582 HOH HOH A . K 8 HOH 111 611 2110 HOH HOH A . K 8 HOH 112 612 1107 HOH HOH A . K 8 HOH 113 613 1151 HOH HOH A . K 8 HOH 114 614 1806 HOH HOH A . K 8 HOH 115 615 826 HOH HOH A . K 8 HOH 116 616 1167 HOH HOH A . K 8 HOH 117 617 1417 HOH HOH A . K 8 HOH 118 618 1071 HOH HOH A . K 8 HOH 119 619 690 HOH HOH A . K 8 HOH 120 620 1010 HOH HOH A . K 8 HOH 121 621 2459 HOH HOH A . K 8 HOH 122 622 1463 HOH HOH A . K 8 HOH 123 623 2166 HOH HOH A . K 8 HOH 124 624 1823 HOH HOH A . K 8 HOH 125 625 1840 HOH HOH A . K 8 HOH 126 626 2660 HOH HOH A . K 8 HOH 127 627 1351 HOH HOH A . K 8 HOH 128 628 1475 HOH HOH A . K 8 HOH 129 629 2210 HOH HOH A . K 8 HOH 130 630 1081 HOH HOH A . K 8 HOH 131 631 1283 HOH HOH A . K 8 HOH 132 632 2308 HOH HOH A . K 8 HOH 133 633 775 HOH HOH A . K 8 HOH 134 634 978 HOH HOH A . K 8 HOH 135 635 2162 HOH HOH A . K 8 HOH 136 636 1226 HOH HOH A . K 8 HOH 137 637 798 HOH HOH A . K 8 HOH 138 638 1308 HOH HOH A . K 8 HOH 139 639 1290 HOH HOH A . K 8 HOH 140 640 1853 HOH HOH A . K 8 HOH 141 641 1999 HOH HOH A . K 8 HOH 142 642 2216 HOH HOH A . K 8 HOH 143 643 1340 HOH HOH A . K 8 HOH 144 644 501 HOH HOH A . K 8 HOH 145 645 1316 HOH HOH A . K 8 HOH 146 646 731 HOH HOH A . K 8 HOH 147 647 1384 HOH HOH A . K 8 HOH 148 648 1302 HOH HOH A . K 8 HOH 149 649 1969 HOH HOH A . K 8 HOH 150 650 1709 HOH HOH A . K 8 HOH 151 651 1461 HOH HOH A . K 8 HOH 152 652 1219 HOH HOH A . K 8 HOH 153 653 621 HOH HOH A . K 8 HOH 154 654 1638 HOH HOH A . K 8 HOH 155 655 1223 HOH HOH A . K 8 HOH 156 656 2602 HOH HOH A . K 8 HOH 157 657 813 HOH HOH A . K 8 HOH 158 658 1515 HOH HOH A . K 8 HOH 159 659 1631 HOH HOH A . K 8 HOH 160 660 588 HOH HOH A . K 8 HOH 161 661 1555 HOH HOH A . K 8 HOH 162 662 1092 HOH HOH A . K 8 HOH 163 663 509 HOH HOH A . K 8 HOH 164 664 1784 HOH HOH A . K 8 HOH 165 665 1832 HOH HOH A . K 8 HOH 166 666 2520 HOH HOH A . K 8 HOH 167 667 1095 HOH HOH A . K 8 HOH 168 668 2433 HOH HOH A . K 8 HOH 169 669 1173 HOH HOH A . K 8 HOH 170 670 1980 HOH HOH A . K 8 HOH 171 671 738 HOH HOH A . K 8 HOH 172 672 970 HOH HOH A . K 8 HOH 173 673 1365 HOH HOH A . K 8 HOH 174 674 1349 HOH HOH A . K 8 HOH 175 675 1221 HOH HOH A . K 8 HOH 176 676 1805 HOH HOH A . K 8 HOH 177 677 1237 HOH HOH A . K 8 HOH 178 678 1836 HOH HOH A . K 8 HOH 179 679 1850 HOH HOH A . K 8 HOH 180 680 1213 HOH HOH A . K 8 HOH 181 681 1883 HOH HOH A . K 8 HOH 182 682 629 HOH HOH A . K 8 HOH 183 683 1299 HOH HOH A . K 8 HOH 184 684 1038 HOH HOH A . K 8 HOH 185 685 2511 HOH HOH A . K 8 HOH 186 686 1718 HOH HOH A . K 8 HOH 187 687 1317 HOH HOH A . K 8 HOH 188 688 677 HOH HOH A . K 8 HOH 189 689 1776 HOH HOH A . K 8 HOH 190 690 1792 HOH HOH A . K 8 HOH 191 691 830 HOH HOH A . K 8 HOH 192 692 1096 HOH HOH A . K 8 HOH 193 693 1030 HOH HOH A . K 8 HOH 194 694 760 HOH HOH A . K 8 HOH 195 695 1089 HOH HOH A . K 8 HOH 196 696 2344 HOH HOH A . K 8 HOH 197 697 932 HOH HOH A . K 8 HOH 198 698 996 HOH HOH A . K 8 HOH 199 699 1689 HOH HOH A . K 8 HOH 200 700 1637 HOH HOH A . K 8 HOH 201 701 2535 HOH HOH A . K 8 HOH 202 702 2330 HOH HOH A . K 8 HOH 203 703 748 HOH HOH A . K 8 HOH 204 704 1699 HOH HOH A . K 8 HOH 205 705 1427 HOH HOH A . K 8 HOH 206 706 2159 HOH HOH A . K 8 HOH 207 707 2364 HOH HOH A . K 8 HOH 208 708 1207 HOH HOH A . K 8 HOH 209 709 1118 HOH HOH A . K 8 HOH 210 710 1684 HOH HOH A . K 8 HOH 211 711 1897 HOH HOH A . K 8 HOH 212 712 1110 HOH HOH A . K 8 HOH 213 713 938 HOH HOH A . K 8 HOH 214 714 1791 HOH HOH A . K 8 HOH 215 715 881 HOH HOH A . K 8 HOH 216 716 2451 HOH HOH A . K 8 HOH 217 717 2250 HOH HOH A . K 8 HOH 218 718 2137 HOH HOH A . K 8 HOH 219 719 2688 HOH HOH A . K 8 HOH 220 720 1658 HOH HOH A . K 8 HOH 221 721 1540 HOH HOH A . K 8 HOH 222 722 1612 HOH HOH A . K 8 HOH 223 723 1016 HOH HOH A . K 8 HOH 224 724 1502 HOH HOH A . K 8 HOH 225 725 575 HOH HOH A . K 8 HOH 226 726 1292 HOH HOH A . K 8 HOH 227 727 948 HOH HOH A . K 8 HOH 228 728 2125 HOH HOH A . K 8 HOH 229 729 2170 HOH HOH A . K 8 HOH 230 730 1359 HOH HOH A . K 8 HOH 231 731 2483 HOH HOH A . K 8 HOH 232 732 1309 HOH HOH A . K 8 HOH 233 733 2319 HOH HOH A . K 8 HOH 234 734 1799 HOH HOH A . K 8 HOH 235 735 2055 HOH HOH A . K 8 HOH 236 736 1391 HOH HOH A . K 8 HOH 237 737 2060 HOH HOH A . K 8 HOH 238 738 2352 HOH HOH A . K 8 HOH 239 739 678 HOH HOH A . K 8 HOH 240 740 1562 HOH HOH A . K 8 HOH 241 741 1488 HOH HOH A . K 8 HOH 242 742 2107 HOH HOH A . K 8 HOH 243 743 1535 HOH HOH A . K 8 HOH 244 744 1716 HOH HOH A . K 8 HOH 245 745 2073 HOH HOH A . K 8 HOH 246 746 2274 HOH HOH A . K 8 HOH 247 747 2611 HOH HOH A . K 8 HOH 248 748 1813 HOH HOH A . K 8 HOH 249 749 1977 HOH HOH A . K 8 HOH 250 750 2734 HOH HOH A . K 8 HOH 251 751 1565 HOH HOH A . K 8 HOH 252 752 2363 HOH HOH A . K 8 HOH 253 753 1174 HOH HOH A . K 8 HOH 254 754 2070 HOH HOH A . K 8 HOH 255 755 1757 HOH HOH A . K 8 HOH 256 756 1528 HOH HOH A . K 8 HOH 257 757 2518 HOH HOH A . K 8 HOH 258 758 1683 HOH HOH A . K 8 HOH 259 759 1700 HOH HOH A . K 8 HOH 260 760 2467 HOH HOH A . K 8 HOH 261 761 2161 HOH HOH A . K 8 HOH 262 762 1109 HOH HOH A . K 8 HOH 263 763 852 HOH HOH A . K 8 HOH 264 764 1677 HOH HOH A . K 8 HOH 265 765 1932 HOH HOH A . K 8 HOH 266 766 696 HOH HOH A . K 8 HOH 267 767 1566 HOH HOH A . K 8 HOH 268 768 969 HOH HOH A . K 8 HOH 269 769 2259 HOH HOH A . K 8 HOH 270 770 1573 HOH HOH A . K 8 HOH 271 771 1749 HOH HOH A . K 8 HOH 272 772 1434 HOH HOH A . K 8 HOH 273 773 2045 HOH HOH A . K 8 HOH 274 774 2650 HOH HOH A . K 8 HOH 275 775 2367 HOH HOH A . K 8 HOH 276 776 864 HOH HOH A . K 8 HOH 277 777 1722 HOH HOH A . K 8 HOH 278 778 1928 HOH HOH A . K 8 HOH 279 779 1433 HOH HOH A . K 8 HOH 280 780 1987 HOH HOH A . K 8 HOH 281 781 2278 HOH HOH A . K 8 HOH 282 782 1225 HOH HOH A . K 8 HOH 283 783 1386 HOH HOH A . K 8 HOH 284 784 2677 HOH HOH A . K 8 HOH 285 785 1161 HOH HOH A . K 8 HOH 286 786 2180 HOH HOH A . K 8 HOH 287 787 1397 HOH HOH A . K 8 HOH 288 788 1866 HOH HOH A . K 8 HOH 289 789 1954 HOH HOH A . K 8 HOH 290 790 2267 HOH HOH A . K 8 HOH 291 791 1857 HOH HOH A . K 8 HOH 292 792 1772 HOH HOH A . K 8 HOH 293 793 1387 HOH HOH A . K 8 HOH 294 794 1672 HOH HOH A . K 8 HOH 295 795 2289 HOH HOH A . K 8 HOH 296 796 1611 HOH HOH A . K 8 HOH 297 797 1079 HOH HOH A . K 8 HOH 298 798 1839 HOH HOH A . K 8 HOH 299 799 914 HOH HOH A . K 8 HOH 300 800 1190 HOH HOH A . K 8 HOH 301 801 950 HOH HOH A . K 8 HOH 302 802 958 HOH HOH A . K 8 HOH 303 803 2704 HOH HOH A . K 8 HOH 304 804 1690 HOH HOH A . K 8 HOH 305 805 1421 HOH HOH A . K 8 HOH 306 806 1015 HOH HOH A . K 8 HOH 307 807 1837 HOH HOH A . K 8 HOH 308 808 1567 HOH HOH A . K 8 HOH 309 809 1694 HOH HOH A . K 8 HOH 310 810 895 HOH HOH A . K 8 HOH 311 811 1706 HOH HOH A . K 8 HOH 312 812 2539 HOH HOH A . K 8 HOH 313 813 1260 HOH HOH A . K 8 HOH 314 814 1486 HOH HOH A . K 8 HOH 315 815 2386 HOH HOH A . K 8 HOH 316 816 2335 HOH HOH A . K 8 HOH 317 817 1991 HOH HOH A . K 8 HOH 318 818 2387 HOH HOH A . K 8 HOH 319 819 2404 HOH HOH A . K 8 HOH 320 820 1472 HOH HOH A . K 8 HOH 321 821 1781 HOH HOH A . K 8 HOH 322 822 2024 HOH HOH A . K 8 HOH 323 823 1361 HOH HOH A . K 8 HOH 324 824 1733 HOH HOH A . K 8 HOH 325 825 2168 HOH HOH A . K 8 HOH 326 826 2735 HOH HOH A . K 8 HOH 327 827 1624 HOH HOH A . K 8 HOH 328 828 1619 HOH HOH A . K 8 HOH 329 829 1306 HOH HOH A . K 8 HOH 330 830 2279 HOH HOH A . K 8 HOH 331 831 1625 HOH HOH A . K 8 HOH 332 832 2140 HOH HOH A . K 8 HOH 333 833 2643 HOH HOH A . K 8 HOH 334 834 645 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2 ? H PG4 . ? A PG4 407 ? 1_555 NA ? I NA . ? A NA 408 ? 1_555 O4 ? H PG4 . ? A PG4 407 ? 1_555 108.7 ? 2 O2 ? H PG4 . ? A PG4 407 ? 1_555 NA ? I NA . ? A NA 408 ? 1_555 O5 ? H PG4 . ? A PG4 407 ? 1_555 132.6 ? 3 O4 ? H PG4 . ? A PG4 407 ? 1_555 NA ? I NA . ? A NA 408 ? 1_555 O5 ? H PG4 . ? A PG4 407 ? 1_555 55.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-06-03 2 'Structure model' 1 1 2020-06-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 REFMAC 5.8.0238 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.25 'Apr. 1, 2019' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC 5.8.0238 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 6 PHENIX 1.16.3549 ? program ? ? refinement ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 724 ? ? O A HOH 779 ? ? 1.60 2 1 O A ACT 404 ? A O A HOH 501 ? ? 1.91 3 1 O A HOH 754 ? ? O A HOH 795 ? ? 1.94 4 1 O A HOH 507 ? ? O A HOH 674 ? ? 2.11 5 1 OXT A ACT 404 ? A O A HOH 502 ? ? 2.12 6 1 O A HOH 614 ? ? O A HOH 659 ? ? 2.16 7 1 O A HOH 717 ? ? O A HOH 778 ? ? 2.17 8 1 O A HOH 527 ? ? O A HOH 752 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 675 ? ? 1_555 O A HOH 750 ? ? 1_656 1.76 2 1 O A HOH 732 ? ? 1_555 O A HOH 787 ? ? 2_747 1.98 3 1 O A HOH 508 ? ? 1_555 O A HOH 769 ? ? 1_556 1.99 4 1 O A HOH 783 ? ? 1_555 O A HOH 787 ? ? 2_747 2.00 5 1 O A HOH 736 ? ? 1_555 O A HOH 779 ? ? 1_655 2.12 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 270 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 270 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 270 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.62 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 5.32 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 63 ? CE ? A LYS 152 CE 2 1 Y 1 A LYS 63 ? NZ ? A LYS 152 NZ 3 1 Y 1 A LYS 68 ? CD ? A LYS 157 CD 4 1 Y 1 A LYS 68 ? CE ? A LYS 157 CE 5 1 Y 1 A LYS 68 ? NZ ? A LYS 157 NZ 6 1 Y 1 A LYS 110 ? CE ? A LYS 199 CE 7 1 Y 1 A LYS 110 ? NZ ? A LYS 199 NZ 8 1 Y 1 A LYS 111 ? CD ? A LYS 200 CD 9 1 Y 1 A LYS 111 ? CE ? A LYS 200 CE 10 1 Y 1 A LYS 111 ? NZ ? A LYS 200 NZ 11 1 Y 1 A LYS 142 ? CE ? A LYS 231 CE 12 1 Y 1 A LYS 142 ? NZ ? A LYS 231 NZ 13 1 Y 1 A LYS 149 ? CE ? A LYS 238 CE 14 1 Y 1 A LYS 149 ? NZ ? A LYS 238 NZ 15 1 Y 1 A LYS 191 ? CG ? A LYS 280 CG 16 1 Y 1 A LYS 191 ? CD ? A LYS 280 CD 17 1 Y 1 A LYS 191 ? CE ? A LYS 280 CE 18 1 Y 1 A LYS 191 ? NZ ? A LYS 280 NZ 19 1 Y 1 A LYS 243 ? CE ? A LYS 332 CE 20 1 Y 1 A LYS 243 ? NZ ? A LYS 332 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -88 ? A MET 1 2 1 Y 1 A SER -87 ? A SER 2 3 1 Y 1 A SER -86 ? A SER 3 4 1 Y 1 A PRO -85 ? A PRO 4 5 1 Y 1 A LEU -84 ? A LEU 5 6 1 Y 1 A LYS -83 ? A LYS 6 7 1 Y 1 A ASN -82 ? A ASN 7 8 1 Y 1 A ALA -81 ? A ALA 8 9 1 Y 1 A LEU -80 ? A LEU 9 10 1 Y 1 A VAL -79 ? A VAL 10 11 1 Y 1 A THR -78 ? A THR 11 12 1 Y 1 A ALA -77 ? A ALA 12 13 1 Y 1 A MET -76 ? A MET 13 14 1 Y 1 A LEU -75 ? A LEU 14 15 1 Y 1 A ALA -74 ? A ALA 15 16 1 Y 1 A GLY -73 ? A GLY 16 17 1 Y 1 A GLY -72 ? A GLY 17 18 1 Y 1 A ALA -71 ? A ALA 18 19 1 Y 1 A LEU -70 ? A LEU 19 20 1 Y 1 A SER -69 ? A SER 20 21 1 Y 1 A SER -68 ? A SER 21 22 1 Y 1 A PRO -67 ? A PRO 22 23 1 Y 1 A THR -66 ? A THR 23 24 1 Y 1 A LYS -65 ? A LYS 24 25 1 Y 1 A GLN -64 ? A GLN 25 26 1 Y 1 A HIS -63 ? A HIS 26 27 1 Y 1 A VAL -62 ? A VAL 27 28 1 Y 1 A GLY -61 ? A GLY 28 29 1 Y 1 A ILE -60 ? A ILE 29 30 1 Y 1 A PRO -59 ? A PRO 30 31 1 Y 1 A VAL -58 ? A VAL 31 32 1 Y 1 A ASN -57 ? A ASN 32 33 1 Y 1 A ALA -56 ? A ALA 33 34 1 Y 1 A SER -55 ? A SER 34 35 1 Y 1 A PRO -54 ? A PRO 35 36 1 Y 1 A GLU -53 ? A GLU 36 37 1 Y 1 A VAL -52 ? A VAL 37 38 1 Y 1 A GLY -51 ? A GLY 38 39 1 Y 1 A PRO -50 ? A PRO 39 40 1 Y 1 A GLY -49 ? A GLY 40 41 1 Y 1 A LYS -48 ? A LYS 41 42 1 Y 1 A TYR -47 ? A TYR 42 43 1 Y 1 A SER -46 ? A SER 43 44 1 Y 1 A PHE -45 ? A PHE 44 45 1 Y 1 A LYS -44 ? A LYS 45 46 1 Y 1 A GLN -43 ? A GLN 46 47 1 Y 1 A VAL -42 ? A VAL 47 48 1 Y 1 A ARG -41 ? A ARG 48 49 1 Y 1 A ASN -40 ? A ASN 49 50 1 Y 1 A PRO -39 ? A PRO 50 51 1 Y 1 A ASN -38 ? A ASN 51 52 1 Y 1 A TYR -37 ? A TYR 52 53 1 Y 1 A LYS -36 ? A LYS 53 54 1 Y 1 A PHE -35 ? A PHE 54 55 1 Y 1 A ASN -34 ? A ASN 55 56 1 Y 1 A GLY -33 ? A GLY 56 57 1 Y 1 A PRO -32 ? A PRO 57 58 1 Y 1 A LEU -31 ? A LEU 58 59 1 Y 1 A SER -30 ? A SER 59 60 1 Y 1 A VAL -29 ? A VAL 60 61 1 Y 1 A LYS -28 ? A LYS 61 62 1 Y 1 A LYS -27 ? A LYS 62 63 1 Y 1 A THR -26 ? A THR 63 64 1 Y 1 A TYR -25 ? A TYR 64 65 1 Y 1 A LEU -24 ? A LEU 65 66 1 Y 1 A LYS -23 ? A LYS 66 67 1 Y 1 A TYR -22 ? A TYR 67 68 1 Y 1 A GLY -21 ? A GLY 68 69 1 Y 1 A VAL -20 ? A VAL 69 70 1 Y 1 A PRO -19 ? A PRO 70 71 1 Y 1 A ILE -18 ? A ILE 71 72 1 Y 1 A PRO -17 ? A PRO 72 73 1 Y 1 A ALA -16 ? A ALA 73 74 1 Y 1 A TRP -15 ? A TRP 74 75 1 Y 1 A LEU -14 ? A LEU 75 76 1 Y 1 A GLU -13 ? A GLU 76 77 1 Y 1 A ASP -12 ? A ASP 77 78 1 Y 1 A ALA -11 ? A ALA 78 79 1 Y 1 A VAL -10 ? A VAL 79 80 1 Y 1 A GLN -9 ? A GLN 80 81 1 Y 1 A ASN -8 ? A ASN 81 82 1 Y 1 A SER -7 ? A SER 82 83 1 Y 1 A THR -6 ? A THR 83 84 1 Y 1 A SER -5 ? A SER 84 85 1 Y 1 A GLY -4 ? A GLY 85 86 1 Y 1 A LEU -3 ? A LEU 86 87 1 Y 1 A ALA -2 ? A ALA 87 88 1 Y 1 A GLU -1 ? A GLU 88 89 1 Y 1 A ARG 0 ? A ARG 89 # _pdbx_deposit_group.group_id G_1002147 _pdbx_deposit_group.group_description ;PanDDA analysis of F2X-Entry vs. Endothiapepsin, including auto-refined models with ligands placed according to PanDDA-map and automatically refined models necessary to reproduce ground state model ; _pdbx_deposit_group.group_title 'PanDDA analysis of F2X-Entry vs. Endothiapepsin' _pdbx_deposit_group.group_type undefined # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'ACETATE ION' ACT 4 'TRIETHYLENE GLYCOL' PGE 5 'TETRAETHYLENE GLYCOL' PG4 6 'SODIUM ION' NA 7 'DI(HYDROXYETHYL)ETHER' PEG 8 water HOH #