data_5RXN # _entry.id 5RXN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5RXN pdb_00005rxn 10.2210/pdb5rxn/pdb WWPDB D_1000179771 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1985-04-01 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_ref_seq_dif.details' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 1985-04-01 _pdbx_database_PDB_obs_spr.pdb_id 5RXN _pdbx_database_PDB_obs_spr.replace_pdb_id 2RXN _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5RXN _pdbx_database_status.recvd_initial_deposition_date 1984-10-15 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Watenpaugh, K.D.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Combined Crystallographic Refinement and Energy Minimization of Rubredoxin at 1.2 Angstrom Resolution' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Crystallographic Refinement of Rubredoxin at 1.2 Angstroms Resolution' J.Mol.Biol. 138 615 ? 1980 JMOBAK UK 0022-2836 0070 ? ? ? 2 'The Structure of Rubredoxin at 1.2 Angstroms Resolution' J.Mol.Biol. 131 509 ? 1979 JMOBAK UK 0022-2836 0070 ? ? ? 3 'Water Structure in a Protein Crystal. Rubredoxin at 1.2 Angstroms Resolution.' J.Mol.Biol. 122 175 ? 1978 JMOBAK UK 0022-2836 0070 ? ? ? 4 'Refinement of the Model of a Protein. Rubredoxin at 1.5 Angstroms Resolution' 'Acta Crystallogr.,Sect.B' 29 943 ? 1973 ASBSDK DK 0108-7681 0622 ? ? ? 5 'Sequence of Rubredoxin by X-Ray Diffraction' J.Mol.Biol. 80 423 ? 1973 JMOBAK UK 0022-2836 0070 ? ? ? 6 'The Structure of a Non-Heme Iron Protein, Rubredoxin at 1.5 Angstroms Resolution' 'Cold Spring Harbor Symp.Quant.Biol.' 36 359 ? 1972 CSHSAZ US 0091-7451 0421 ? ? ? 7 'The Primary Structure of Clostridium Pasteurianum Rubredoxin' Thesis 33 1436 ? 1972 DABBBA US 0419-4217 0101 ? ? ? 8 'Structure of Rubredoxin. An X-Ray Study to 2.5 Angstroms Resolution' J.Mol.Biol. 50 391 ? 1970 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Watenpaugh, K.D.' 1 ? 1 'Watenpaugh, K.D.' 2 ? 1 'Sieker, L.C.' 3 ? 1 'Jensen, L.H.' 4 ? 2 'Watenpaugh, K.D.' 5 ? 2 'Sieker, L.C.' 6 ? 2 'Jensen, L.H.' 7 ? 3 'Watenpaugh, K.D.' 8 ? 3 'Margulis, T.N.' 9 ? 3 'Sieker, L.C.' 10 ? 3 'Jensen, L.H.' 11 ? 4 'Watenpaugh, K.D.' 12 ? 4 'Sieker, L.C.' 13 ? 4 'Herriott, J.R.' 14 ? 4 'Jensen, L.H.' 15 ? 5 'Herriott, J.R.' 16 ? 5 'Watenpaugh, K.D.' 17 ? 5 'Sieker, L.C.' 18 ? 5 'Jensen, L.H.' 19 ? 6 'Watenpaugh, K.D.' 20 ? 6 'Sieker, L.C.' 21 ? 6 'Herriott, J.R.' 22 ? 6 'Jensen, L.H.' 23 ? 7 'Mccarthy, K.F.' 24 ? 8 'Herriott, J.R.' 25 ? 8 'Sieker, L.C.' 26 ? 8 'Jensen, L.H.' 27 ? 8 'Lovenberg, W.' 28 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man RUBREDOXIN 6054.566 1 ? ? ? ? 2 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 3 water nat water 18.015 102 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MKKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGKDEFEEVEE _entity_poly.pdbx_seq_one_letter_code_can MKKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGKDEFEEVEE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 TYR n 1 5 THR n 1 6 CYS n 1 7 THR n 1 8 VAL n 1 9 CYS n 1 10 GLY n 1 11 TYR n 1 12 ILE n 1 13 TYR n 1 14 ASP n 1 15 PRO n 1 16 GLU n 1 17 ASP n 1 18 GLY n 1 19 ASP n 1 20 PRO n 1 21 ASP n 1 22 ASP n 1 23 GLY n 1 24 VAL n 1 25 ASN n 1 26 PRO n 1 27 GLY n 1 28 THR n 1 29 ASP n 1 30 PHE n 1 31 LYS n 1 32 ASP n 1 33 ILE n 1 34 PRO n 1 35 ASP n 1 36 ASP n 1 37 TRP n 1 38 VAL n 1 39 CYS n 1 40 PRO n 1 41 LEU n 1 42 CYS n 1 43 GLY n 1 44 VAL n 1 45 GLY n 1 46 LYS n 1 47 ASP n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLU n 1 52 VAL n 1 53 GLU n 1 54 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium pasteurianum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1501 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 TRP 37 37 37 TRP TRP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 GLU 54 54 54 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 55 1 FE FE A . C 3 HOH 1 56 2 HOH HOH A . C 3 HOH 2 57 3 HOH HOH A . C 3 HOH 3 58 4 HOH HOH A . C 3 HOH 4 59 5 HOH HOH A . C 3 HOH 5 60 6 HOH HOH A . C 3 HOH 6 61 7 HOH HOH A . C 3 HOH 7 62 8 HOH HOH A . C 3 HOH 8 63 9 HOH HOH A . C 3 HOH 9 64 10 HOH HOH A . C 3 HOH 10 65 11 HOH HOH A . C 3 HOH 11 66 12 HOH HOH A . C 3 HOH 12 67 13 HOH HOH A . C 3 HOH 13 68 14 HOH HOH A . C 3 HOH 14 69 15 HOH HOH A . C 3 HOH 15 70 16 HOH HOH A . C 3 HOH 16 71 17 HOH HOH A . C 3 HOH 17 72 18 HOH HOH A . C 3 HOH 18 73 19 HOH HOH A . C 3 HOH 19 74 20 HOH HOH A . C 3 HOH 20 75 21 HOH HOH A . C 3 HOH 21 76 22 HOH HOH A . C 3 HOH 22 77 23 HOH HOH A . C 3 HOH 23 78 24 HOH HOH A . C 3 HOH 24 79 25 HOH HOH A . C 3 HOH 25 80 26 HOH HOH A . C 3 HOH 26 81 27 HOH HOH A . C 3 HOH 27 82 28 HOH HOH A . C 3 HOH 28 83 29 HOH HOH A . C 3 HOH 29 84 30 HOH HOH A . C 3 HOH 30 85 31 HOH HOH A . C 3 HOH 31 86 32 HOH HOH A . C 3 HOH 32 87 33 HOH HOH A . C 3 HOH 33 88 34 HOH HOH A . C 3 HOH 34 89 35 HOH HOH A . C 3 HOH 35 90 36 HOH HOH A . C 3 HOH 36 91 37 HOH HOH A . C 3 HOH 37 92 38 HOH HOH A . C 3 HOH 38 93 39 HOH HOH A . C 3 HOH 39 94 40 HOH HOH A . C 3 HOH 40 95 41 HOH HOH A . C 3 HOH 41 96 42 HOH HOH A . C 3 HOH 42 97 43 HOH HOH A . C 3 HOH 43 98 44 HOH HOH A . C 3 HOH 44 99 45 HOH HOH A . C 3 HOH 45 100 46 HOH HOH A . C 3 HOH 46 101 47 HOH HOH A . C 3 HOH 47 102 48 HOH HOH A . C 3 HOH 48 103 49 HOH HOH A . C 3 HOH 49 104 50 HOH HOH A . C 3 HOH 50 105 51 HOH HOH A . C 3 HOH 51 106 52 HOH HOH A . C 3 HOH 52 107 53 HOH HOH A . C 3 HOH 53 108 54 HOH HOH A . C 3 HOH 54 109 55 HOH HOH A . C 3 HOH 55 110 2 HOH HOH A . C 3 HOH 56 111 57 HOH HOH A . C 3 HOH 57 112 58 HOH HOH A . C 3 HOH 58 113 59 HOH HOH A . C 3 HOH 59 114 60 HOH HOH A . C 3 HOH 60 115 61 HOH HOH A . C 3 HOH 61 116 62 HOH HOH A . C 3 HOH 62 117 63 HOH HOH A . C 3 HOH 63 118 64 HOH HOH A . C 3 HOH 64 119 65 HOH HOH A . C 3 HOH 65 120 66 HOH HOH A . C 3 HOH 66 121 67 HOH HOH A . C 3 HOH 67 122 68 HOH HOH A . C 3 HOH 68 123 69 HOH HOH A . C 3 HOH 69 124 70 HOH HOH A . C 3 HOH 70 125 71 HOH HOH A . C 3 HOH 71 126 72 HOH HOH A . C 3 HOH 72 127 73 HOH HOH A . C 3 HOH 73 128 74 HOH HOH A . C 3 HOH 74 129 75 HOH HOH A . C 3 HOH 75 130 76 HOH HOH A . C 3 HOH 76 131 77 HOH HOH A . C 3 HOH 77 132 78 HOH HOH A . C 3 HOH 78 133 79 HOH HOH A . C 3 HOH 79 134 80 HOH HOH A . C 3 HOH 80 135 81 HOH HOH A . C 3 HOH 81 136 82 HOH HOH A . C 3 HOH 82 137 83 HOH HOH A . C 3 HOH 83 138 84 HOH HOH A . C 3 HOH 84 139 85 HOH HOH A . C 3 HOH 85 140 86 HOH HOH A . C 3 HOH 86 141 87 HOH HOH A . C 3 HOH 87 142 88 HOH HOH A . C 3 HOH 88 143 89 HOH HOH A . C 3 HOH 89 144 90 HOH HOH A . C 3 HOH 90 145 91 HOH HOH A . C 3 HOH 91 146 92 HOH HOH A . C 3 HOH 92 147 93 HOH HOH A . C 3 HOH 93 148 94 HOH HOH A . C 3 HOH 94 149 95 HOH HOH A . C 3 HOH 95 150 96 HOH HOH A . C 3 HOH 96 151 97 HOH HOH A . C 3 HOH 97 152 98 HOH HOH A . C 3 HOH 98 153 99 HOH HOH A . C 3 HOH 99 154 100 HOH HOH A . C 3 HOH 100 155 101 HOH HOH A . C 3 HOH 101 156 102 HOH HOH A . C 3 HOH 102 157 103 HOH HOH A . # _software.name COMPUTER _software.classification refinement _software.version 'GRAPHICS SYSTEM.' _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 5RXN _cell.length_a 64.290 _cell.length_b 64.290 _cell.length_c 32.490 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RXN _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 # _exptl.entry_id 5RXN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.32 _exptl_crystal.description ? # _refine.entry_id 5RXN _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;EACH HYDROGEN ATOM POSITION HAS BEEN CALCULATED FROM THE COORDINATES OF THE ATOM IT IS BONDED TO. THE B-VALUE OF THE HEAVIER ATOM WAS ASSIGNED TO THE HYDROGEN ATOM. THE CELL DIMENSIONS VARIED FROM START TO FINISH OF DATA COLLECTION. THE VALUES GIVEN ARE THOSE AT THE MID-POINT OF DATA COLLECTION. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 770 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 873 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 5RXN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5RXN _struct.title 'COMBINED CRYSTALLOGRAPHIC REFINEMENT AND ENERGY MINIMIZATION OF RUBREDOXIN AT 1.2 ANGSTROM RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5RXN _struct_keywords.pdbx_keywords 'ELECTRON TRANSFER(IRON-SULFUR PROTEIN)' _struct_keywords.text 'ELECTRON TRANSFER(IRON-SULFUR PROTEIN)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RUBR_CLOPA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00268 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code MKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEE _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5RXN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 54 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00268 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 54 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 54 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5RXN ASP A 14 ? UNP P00268 ASN 14 conflict 14 1 1 5RXN ASP A 22 ? UNP P00268 ASN 22 conflict 22 2 1 5RXN GLU A 48 ? UNP P00268 GLN 48 conflict 48 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 20 ? GLY A 23 ? PRO A 20 GLY A 23 5 ? 4 HELX_P HELX_P2 2 ASP A 29 ? ILE A 33 ? ASP A 29 ILE A 33 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 6 SG ? ? ? 1_555 B FE . FE ? ? A CYS 6 A FE 55 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc2 metalc ? ? A CYS 9 SG ? ? ? 1_555 B FE . FE ? ? A CYS 9 A FE 55 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc3 metalc ? ? A CYS 39 SG ? ? ? 1_555 B FE . FE ? ? A CYS 39 A FE 55 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc4 metalc ? ? A CYS 42 SG ? ? ? 1_555 B FE . FE ? ? A CYS 42 A FE 55 1_555 ? ? ? ? ? ? ? 2.251 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 6 ? A CYS 6 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 9 ? A CYS 9 ? 1_555 114.5 ? 2 SG ? A CYS 6 ? A CYS 6 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 39 ? A CYS 39 ? 1_555 109.1 ? 3 SG ? A CYS 9 ? A CYS 9 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 39 ? A CYS 39 ? 1_555 103.9 ? 4 SG ? A CYS 6 ? A CYS 6 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 103.9 ? 5 SG ? A CYS 9 ? A CYS 9 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 113.7 ? 6 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE ? B FE . ? A FE 55 ? 1_555 SG ? A CYS 42 ? A CYS 42 ? 1_555 112.0 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 12 ? TYR A 13 ? ILE A 12 TYR A 13 A 2 TYR A 4 ? CYS A 6 ? TYR A 4 CYS A 6 A 3 PHE A 49 ? GLU A 51 ? PHE A 49 GLU A 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 13 ? N TYR A 13 O TYR A 4 ? O TYR A 4 A 2 3 N THR A 5 ? N THR A 5 O GLU A 50 ? O GLU A 50 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id FE _struct_site.pdbx_auth_seq_id 55 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE FE A 55' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 6 ? CYS A 6 . ? 1_555 ? 2 AC1 4 CYS A 9 ? CYS A 9 . ? 1_555 ? 3 AC1 4 CYS A 39 ? CYS A 39 . ? 1_555 ? 4 AC1 4 CYS A 42 ? CYS A 42 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MET 1 ? ? SD A MET 1 ? ? CE A MET 1 ? ? 116.10 100.20 15.90 1.60 N 2 1 CB A ASP 14 ? ? CG A ASP 14 ? ? OD1 A ASP 14 ? ? 128.85 118.30 10.55 0.90 N 3 1 CB A ASP 14 ? ? CG A ASP 14 ? ? OD2 A ASP 14 ? ? 110.75 118.30 -7.55 0.90 N 4 1 CB A ASP 17 ? ? CG A ASP 17 ? ? OD2 A ASP 17 ? ? 112.43 118.30 -5.87 0.90 N 5 1 CB A ASP 21 ? ? CG A ASP 21 ? ? OD1 A ASP 21 ? ? 140.70 118.30 22.40 0.90 N 6 1 CB A ASP 21 ? ? CG A ASP 21 ? ? OD2 A ASP 21 ? ? 96.20 118.30 -22.10 0.90 N 7 1 CB A ASP 36 ? ? CG A ASP 36 ? ? OD2 A ASP 36 ? ? 124.36 118.30 6.06 0.90 N 8 1 CB A LEU 41 ? ? CG A LEU 41 ? ? CD2 A LEU 41 ? ? 124.05 111.00 13.05 1.70 N 9 1 OE1 A GLU 48 ? ? CD A GLU 48 ? ? OE2 A GLU 48 ? ? 115.64 123.30 -7.66 1.20 N 10 1 CB A GLU 53 ? ? CA A GLU 53 ? ? C A GLU 53 ? ? 123.51 110.40 13.11 2.00 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CB _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id THR _pdbx_validate_chiral.auth_seq_id 5 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ASP _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 21 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -10.33 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 ASP N N N N 18 ASP CA C N S 19 ASP C C N N 20 ASP O O N N 21 ASP CB C N N 22 ASP CG C N N 23 ASP OD1 O N N 24 ASP OD2 O N N 25 ASP OXT O N N 26 ASP H H N N 27 ASP H2 H N N 28 ASP HA H N N 29 ASP HB2 H N N 30 ASP HB3 H N N 31 ASP HD2 H N N 32 ASP HXT H N N 33 CYS N N N N 34 CYS CA C N R 35 CYS C C N N 36 CYS O O N N 37 CYS CB C N N 38 CYS SG S N N 39 CYS OXT O N N 40 CYS H H N N 41 CYS H2 H N N 42 CYS HA H N N 43 CYS HB2 H N N 44 CYS HB3 H N N 45 CYS HG H N N 46 CYS HXT H N N 47 FE FE FE N N 48 GLN N N N N 49 GLN CA C N S 50 GLN C C N N 51 GLN O O N N 52 GLN CB C N N 53 GLN CG C N N 54 GLN CD C N N 55 GLN OE1 O N N 56 GLN NE2 N N N 57 GLN OXT O N N 58 GLN H H N N 59 GLN H2 H N N 60 GLN HA H N N 61 GLN HB2 H N N 62 GLN HB3 H N N 63 GLN HG2 H N N 64 GLN HG3 H N N 65 GLN HE21 H N N 66 GLN HE22 H N N 67 GLN HXT H N N 68 GLU N N N N 69 GLU CA C N S 70 GLU C C N N 71 GLU O O N N 72 GLU CB C N N 73 GLU CG C N N 74 GLU CD C N N 75 GLU OE1 O N N 76 GLU OE2 O N N 77 GLU OXT O N N 78 GLU H H N N 79 GLU H2 H N N 80 GLU HA H N N 81 GLU HB2 H N N 82 GLU HB3 H N N 83 GLU HG2 H N N 84 GLU HG3 H N N 85 GLU HE2 H N N 86 GLU HXT H N N 87 GLY N N N N 88 GLY CA C N N 89 GLY C C N N 90 GLY O O N N 91 GLY OXT O N N 92 GLY H H N N 93 GLY H2 H N N 94 GLY HA2 H N N 95 GLY HA3 H N N 96 GLY HXT H N N 97 HOH O O N N 98 HOH H1 H N N 99 HOH H2 H N N 100 ILE N N N N 101 ILE CA C N S 102 ILE C C N N 103 ILE O O N N 104 ILE CB C N S 105 ILE CG1 C N N 106 ILE CG2 C N N 107 ILE CD1 C N N 108 ILE OXT O N N 109 ILE H H N N 110 ILE H2 H N N 111 ILE HA H N N 112 ILE HB H N N 113 ILE HG12 H N N 114 ILE HG13 H N N 115 ILE HG21 H N N 116 ILE HG22 H N N 117 ILE HG23 H N N 118 ILE HD11 H N N 119 ILE HD12 H N N 120 ILE HD13 H N N 121 ILE HXT H N N 122 LEU N N N N 123 LEU CA C N S 124 LEU C C N N 125 LEU O O N N 126 LEU CB C N N 127 LEU CG C N N 128 LEU CD1 C N N 129 LEU CD2 C N N 130 LEU OXT O N N 131 LEU H H N N 132 LEU H2 H N N 133 LEU HA H N N 134 LEU HB2 H N N 135 LEU HB3 H N N 136 LEU HG H N N 137 LEU HD11 H N N 138 LEU HD12 H N N 139 LEU HD13 H N N 140 LEU HD21 H N N 141 LEU HD22 H N N 142 LEU HD23 H N N 143 LEU HXT H N N 144 LYS N N N N 145 LYS CA C N S 146 LYS C C N N 147 LYS O O N N 148 LYS CB C N N 149 LYS CG C N N 150 LYS CD C N N 151 LYS CE C N N 152 LYS NZ N N N 153 LYS OXT O N N 154 LYS H H N N 155 LYS H2 H N N 156 LYS HA H N N 157 LYS HB2 H N N 158 LYS HB3 H N N 159 LYS HG2 H N N 160 LYS HG3 H N N 161 LYS HD2 H N N 162 LYS HD3 H N N 163 LYS HE2 H N N 164 LYS HE3 H N N 165 LYS HZ1 H N N 166 LYS HZ2 H N N 167 LYS HZ3 H N N 168 LYS HXT H N N 169 MET N N N N 170 MET CA C N S 171 MET C C N N 172 MET O O N N 173 MET CB C N N 174 MET CG C N N 175 MET SD S N N 176 MET CE C N N 177 MET OXT O N N 178 MET H H N N 179 MET H2 H N N 180 MET HA H N N 181 MET HB2 H N N 182 MET HB3 H N N 183 MET HG2 H N N 184 MET HG3 H N N 185 MET HE1 H N N 186 MET HE2 H N N 187 MET HE3 H N N 188 MET HXT H N N 189 PHE N N N N 190 PHE CA C N S 191 PHE C C N N 192 PHE O O N N 193 PHE CB C N N 194 PHE CG C Y N 195 PHE CD1 C Y N 196 PHE CD2 C Y N 197 PHE CE1 C Y N 198 PHE CE2 C Y N 199 PHE CZ C Y N 200 PHE OXT O N N 201 PHE H H N N 202 PHE H2 H N N 203 PHE HA H N N 204 PHE HB2 H N N 205 PHE HB3 H N N 206 PHE HD1 H N N 207 PHE HD2 H N N 208 PHE HE1 H N N 209 PHE HE2 H N N 210 PHE HZ H N N 211 PHE HXT H N N 212 PRO N N N N 213 PRO CA C N S 214 PRO C C N N 215 PRO O O N N 216 PRO CB C N N 217 PRO CG C N N 218 PRO CD C N N 219 PRO OXT O N N 220 PRO H H N N 221 PRO HA H N N 222 PRO HB2 H N N 223 PRO HB3 H N N 224 PRO HG2 H N N 225 PRO HG3 H N N 226 PRO HD2 H N N 227 PRO HD3 H N N 228 PRO HXT H N N 229 THR N N N N 230 THR CA C N S 231 THR C C N N 232 THR O O N N 233 THR CB C N R 234 THR OG1 O N N 235 THR CG2 C N N 236 THR OXT O N N 237 THR H H N N 238 THR H2 H N N 239 THR HA H N N 240 THR HB H N N 241 THR HG1 H N N 242 THR HG21 H N N 243 THR HG22 H N N 244 THR HG23 H N N 245 THR HXT H N N 246 TRP N N N N 247 TRP CA C N S 248 TRP C C N N 249 TRP O O N N 250 TRP CB C N N 251 TRP CG C Y N 252 TRP CD1 C Y N 253 TRP CD2 C Y N 254 TRP NE1 N Y N 255 TRP CE2 C Y N 256 TRP CE3 C Y N 257 TRP CZ2 C Y N 258 TRP CZ3 C Y N 259 TRP CH2 C Y N 260 TRP OXT O N N 261 TRP H H N N 262 TRP H2 H N N 263 TRP HA H N N 264 TRP HB2 H N N 265 TRP HB3 H N N 266 TRP HD1 H N N 267 TRP HE1 H N N 268 TRP HE3 H N N 269 TRP HZ2 H N N 270 TRP HZ3 H N N 271 TRP HH2 H N N 272 TRP HXT H N N 273 TYR N N N N 274 TYR CA C N S 275 TYR C C N N 276 TYR O O N N 277 TYR CB C N N 278 TYR CG C Y N 279 TYR CD1 C Y N 280 TYR CD2 C Y N 281 TYR CE1 C Y N 282 TYR CE2 C Y N 283 TYR CZ C Y N 284 TYR OH O N N 285 TYR OXT O N N 286 TYR H H N N 287 TYR H2 H N N 288 TYR HA H N N 289 TYR HB2 H N N 290 TYR HB3 H N N 291 TYR HD1 H N N 292 TYR HD2 H N N 293 TYR HE1 H N N 294 TYR HE2 H N N 295 TYR HH H N N 296 TYR HXT H N N 297 VAL N N N N 298 VAL CA C N S 299 VAL C C N N 300 VAL O O N N 301 VAL CB C N N 302 VAL CG1 C N N 303 VAL CG2 C N N 304 VAL OXT O N N 305 VAL H H N N 306 VAL H2 H N N 307 VAL HA H N N 308 VAL HB H N N 309 VAL HG11 H N N 310 VAL HG12 H N N 311 VAL HG13 H N N 312 VAL HG21 H N N 313 VAL HG22 H N N 314 VAL HG23 H N N 315 VAL HXT H N N 316 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 ASP N CA sing N N 17 ASP N H sing N N 18 ASP N H2 sing N N 19 ASP CA C sing N N 20 ASP CA CB sing N N 21 ASP CA HA sing N N 22 ASP C O doub N N 23 ASP C OXT sing N N 24 ASP CB CG sing N N 25 ASP CB HB2 sing N N 26 ASP CB HB3 sing N N 27 ASP CG OD1 doub N N 28 ASP CG OD2 sing N N 29 ASP OD2 HD2 sing N N 30 ASP OXT HXT sing N N 31 CYS N CA sing N N 32 CYS N H sing N N 33 CYS N H2 sing N N 34 CYS CA C sing N N 35 CYS CA CB sing N N 36 CYS CA HA sing N N 37 CYS C O doub N N 38 CYS C OXT sing N N 39 CYS CB SG sing N N 40 CYS CB HB2 sing N N 41 CYS CB HB3 sing N N 42 CYS SG HG sing N N 43 CYS OXT HXT sing N N 44 GLN N CA sing N N 45 GLN N H sing N N 46 GLN N H2 sing N N 47 GLN CA C sing N N 48 GLN CA CB sing N N 49 GLN CA HA sing N N 50 GLN C O doub N N 51 GLN C OXT sing N N 52 GLN CB CG sing N N 53 GLN CB HB2 sing N N 54 GLN CB HB3 sing N N 55 GLN CG CD sing N N 56 GLN CG HG2 sing N N 57 GLN CG HG3 sing N N 58 GLN CD OE1 doub N N 59 GLN CD NE2 sing N N 60 GLN NE2 HE21 sing N N 61 GLN NE2 HE22 sing N N 62 GLN OXT HXT sing N N 63 GLU N CA sing N N 64 GLU N H sing N N 65 GLU N H2 sing N N 66 GLU CA C sing N N 67 GLU CA CB sing N N 68 GLU CA HA sing N N 69 GLU C O doub N N 70 GLU C OXT sing N N 71 GLU CB CG sing N N 72 GLU CB HB2 sing N N 73 GLU CB HB3 sing N N 74 GLU CG CD sing N N 75 GLU CG HG2 sing N N 76 GLU CG HG3 sing N N 77 GLU CD OE1 doub N N 78 GLU CD OE2 sing N N 79 GLU OE2 HE2 sing N N 80 GLU OXT HXT sing N N 81 GLY N CA sing N N 82 GLY N H sing N N 83 GLY N H2 sing N N 84 GLY CA C sing N N 85 GLY CA HA2 sing N N 86 GLY CA HA3 sing N N 87 GLY C O doub N N 88 GLY C OXT sing N N 89 GLY OXT HXT sing N N 90 HOH O H1 sing N N 91 HOH O H2 sing N N 92 ILE N CA sing N N 93 ILE N H sing N N 94 ILE N H2 sing N N 95 ILE CA C sing N N 96 ILE CA CB sing N N 97 ILE CA HA sing N N 98 ILE C O doub N N 99 ILE C OXT sing N N 100 ILE CB CG1 sing N N 101 ILE CB CG2 sing N N 102 ILE CB HB sing N N 103 ILE CG1 CD1 sing N N 104 ILE CG1 HG12 sing N N 105 ILE CG1 HG13 sing N N 106 ILE CG2 HG21 sing N N 107 ILE CG2 HG22 sing N N 108 ILE CG2 HG23 sing N N 109 ILE CD1 HD11 sing N N 110 ILE CD1 HD12 sing N N 111 ILE CD1 HD13 sing N N 112 ILE OXT HXT sing N N 113 LEU N CA sing N N 114 LEU N H sing N N 115 LEU N H2 sing N N 116 LEU CA C sing N N 117 LEU CA CB sing N N 118 LEU CA HA sing N N 119 LEU C O doub N N 120 LEU C OXT sing N N 121 LEU CB CG sing N N 122 LEU CB HB2 sing N N 123 LEU CB HB3 sing N N 124 LEU CG CD1 sing N N 125 LEU CG CD2 sing N N 126 LEU CG HG sing N N 127 LEU CD1 HD11 sing N N 128 LEU CD1 HD12 sing N N 129 LEU CD1 HD13 sing N N 130 LEU CD2 HD21 sing N N 131 LEU CD2 HD22 sing N N 132 LEU CD2 HD23 sing N N 133 LEU OXT HXT sing N N 134 LYS N CA sing N N 135 LYS N H sing N N 136 LYS N H2 sing N N 137 LYS CA C sing N N 138 LYS CA CB sing N N 139 LYS CA HA sing N N 140 LYS C O doub N N 141 LYS C OXT sing N N 142 LYS CB CG sing N N 143 LYS CB HB2 sing N N 144 LYS CB HB3 sing N N 145 LYS CG CD sing N N 146 LYS CG HG2 sing N N 147 LYS CG HG3 sing N N 148 LYS CD CE sing N N 149 LYS CD HD2 sing N N 150 LYS CD HD3 sing N N 151 LYS CE NZ sing N N 152 LYS CE HE2 sing N N 153 LYS CE HE3 sing N N 154 LYS NZ HZ1 sing N N 155 LYS NZ HZ2 sing N N 156 LYS NZ HZ3 sing N N 157 LYS OXT HXT sing N N 158 MET N CA sing N N 159 MET N H sing N N 160 MET N H2 sing N N 161 MET CA C sing N N 162 MET CA CB sing N N 163 MET CA HA sing N N 164 MET C O doub N N 165 MET C OXT sing N N 166 MET CB CG sing N N 167 MET CB HB2 sing N N 168 MET CB HB3 sing N N 169 MET CG SD sing N N 170 MET CG HG2 sing N N 171 MET CG HG3 sing N N 172 MET SD CE sing N N 173 MET CE HE1 sing N N 174 MET CE HE2 sing N N 175 MET CE HE3 sing N N 176 MET OXT HXT sing N N 177 PHE N CA sing N N 178 PHE N H sing N N 179 PHE N H2 sing N N 180 PHE CA C sing N N 181 PHE CA CB sing N N 182 PHE CA HA sing N N 183 PHE C O doub N N 184 PHE C OXT sing N N 185 PHE CB CG sing N N 186 PHE CB HB2 sing N N 187 PHE CB HB3 sing N N 188 PHE CG CD1 doub Y N 189 PHE CG CD2 sing Y N 190 PHE CD1 CE1 sing Y N 191 PHE CD1 HD1 sing N N 192 PHE CD2 CE2 doub Y N 193 PHE CD2 HD2 sing N N 194 PHE CE1 CZ doub Y N 195 PHE CE1 HE1 sing N N 196 PHE CE2 CZ sing Y N 197 PHE CE2 HE2 sing N N 198 PHE CZ HZ sing N N 199 PHE OXT HXT sing N N 200 PRO N CA sing N N 201 PRO N CD sing N N 202 PRO N H sing N N 203 PRO CA C sing N N 204 PRO CA CB sing N N 205 PRO CA HA sing N N 206 PRO C O doub N N 207 PRO C OXT sing N N 208 PRO CB CG sing N N 209 PRO CB HB2 sing N N 210 PRO CB HB3 sing N N 211 PRO CG CD sing N N 212 PRO CG HG2 sing N N 213 PRO CG HG3 sing N N 214 PRO CD HD2 sing N N 215 PRO CD HD3 sing N N 216 PRO OXT HXT sing N N 217 THR N CA sing N N 218 THR N H sing N N 219 THR N H2 sing N N 220 THR CA C sing N N 221 THR CA CB sing N N 222 THR CA HA sing N N 223 THR C O doub N N 224 THR C OXT sing N N 225 THR CB OG1 sing N N 226 THR CB CG2 sing N N 227 THR CB HB sing N N 228 THR OG1 HG1 sing N N 229 THR CG2 HG21 sing N N 230 THR CG2 HG22 sing N N 231 THR CG2 HG23 sing N N 232 THR OXT HXT sing N N 233 TRP N CA sing N N 234 TRP N H sing N N 235 TRP N H2 sing N N 236 TRP CA C sing N N 237 TRP CA CB sing N N 238 TRP CA HA sing N N 239 TRP C O doub N N 240 TRP C OXT sing N N 241 TRP CB CG sing N N 242 TRP CB HB2 sing N N 243 TRP CB HB3 sing N N 244 TRP CG CD1 doub Y N 245 TRP CG CD2 sing Y N 246 TRP CD1 NE1 sing Y N 247 TRP CD1 HD1 sing N N 248 TRP CD2 CE2 doub Y N 249 TRP CD2 CE3 sing Y N 250 TRP NE1 CE2 sing Y N 251 TRP NE1 HE1 sing N N 252 TRP CE2 CZ2 sing Y N 253 TRP CE3 CZ3 doub Y N 254 TRP CE3 HE3 sing N N 255 TRP CZ2 CH2 doub Y N 256 TRP CZ2 HZ2 sing N N 257 TRP CZ3 CH2 sing Y N 258 TRP CZ3 HZ3 sing N N 259 TRP CH2 HH2 sing N N 260 TRP OXT HXT sing N N 261 TYR N CA sing N N 262 TYR N H sing N N 263 TYR N H2 sing N N 264 TYR CA C sing N N 265 TYR CA CB sing N N 266 TYR CA HA sing N N 267 TYR C O doub N N 268 TYR C OXT sing N N 269 TYR CB CG sing N N 270 TYR CB HB2 sing N N 271 TYR CB HB3 sing N N 272 TYR CG CD1 doub Y N 273 TYR CG CD2 sing Y N 274 TYR CD1 CE1 sing Y N 275 TYR CD1 HD1 sing N N 276 TYR CD2 CE2 doub Y N 277 TYR CD2 HD2 sing N N 278 TYR CE1 CZ doub Y N 279 TYR CE1 HE1 sing N N 280 TYR CE2 CZ sing Y N 281 TYR CE2 HE2 sing N N 282 TYR CZ OH sing N N 283 TYR OH HH sing N N 284 TYR OXT HXT sing N N 285 VAL N CA sing N N 286 VAL N H sing N N 287 VAL N H2 sing N N 288 VAL CA C sing N N 289 VAL CA CB sing N N 290 VAL CA HA sing N N 291 VAL C O doub N N 292 VAL C OXT sing N N 293 VAL CB CG1 sing N N 294 VAL CB CG2 sing N N 295 VAL CB HB sing N N 296 VAL CG1 HG11 sing N N 297 VAL CG1 HG12 sing N N 298 VAL CG1 HG13 sing N N 299 VAL CG2 HG21 sing N N 300 VAL CG2 HG22 sing N N 301 VAL CG2 HG23 sing N N 302 VAL OXT HXT sing N N 303 # _atom_sites.entry_id 5RXN _atom_sites.fract_transf_matrix[1][1] 0.015550 _atom_sites.fract_transf_matrix[1][2] 0.008980 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017960 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030780 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O S # loop_