data_5S8M # _entry.id 5S8M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5S8M pdb_00005s8m 10.2210/pdb5s8m/pdb WWPDB D_1001404195 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-13 2 'Structure model' 1 1 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 5S8M _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-12-17 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krojer, T.' 1 'Talon, R.' 2 'Fairhead, M.' 3 'Szykowska, A.' 4 'Burgess-Brown, N.A.' 5 'Brennan, P.E.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Bountra, C.' 9 'von Delft, F.' 10 # _citation.id primary _citation.title 'XChem group deposition' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Krojer, T.' ? 1 primary 'Talon, R.' ? 2 primary 'Fairhead, M.' ? 3 primary 'Szykowska, A.' ? 4 primary 'Burgess-Brown, N.A.' ? 5 primary 'Brennan, P.E.' ? 6 primary 'Arrowsmith, C.H.' ? 7 primary 'Edwards, A.M.' ? 8 primary 'Bountra, C.' ? 9 primary 'von Delft, F.' ? 10 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PH-interacting protein' 15156.185 1 ? ? ? ? 2 non-polymer syn 1-BENZYL-1H-IMIDAZOLE 158.200 1 ? ? ? ? 3 water nat water 18.015 105 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PHIP,DDB1- and CUL4-associated factor 14,IRS-1 PH domain-binding protein,WD repeat-containing protein 11' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNS KAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR ; _entity_poly.pdbx_seq_one_letter_code_can ;SMSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNS KAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1-BENZYL-1H-IMIDAZOLE 1BN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 SER n 1 4 TYR n 1 5 ASP n 1 6 ILE n 1 7 GLN n 1 8 ALA n 1 9 TRP n 1 10 LYS n 1 11 LYS n 1 12 GLN n 1 13 CYS n 1 14 GLU n 1 15 GLU n 1 16 LEU n 1 17 LEU n 1 18 ASN n 1 19 LEU n 1 20 ILE n 1 21 PHE n 1 22 GLN n 1 23 CYS n 1 24 GLU n 1 25 ASP n 1 26 SER n 1 27 GLU n 1 28 PRO n 1 29 PHE n 1 30 ARG n 1 31 GLN n 1 32 PRO n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 LEU n 1 37 GLU n 1 38 TYR n 1 39 PRO n 1 40 ASP n 1 41 TYR n 1 42 ARG n 1 43 ASP n 1 44 ILE n 1 45 ILE n 1 46 ASP n 1 47 THR n 1 48 PRO n 1 49 MET n 1 50 ASP n 1 51 PHE n 1 52 ALA n 1 53 THR n 1 54 VAL n 1 55 ARG n 1 56 GLU n 1 57 THR n 1 58 LEU n 1 59 GLU n 1 60 ALA n 1 61 GLY n 1 62 ASN n 1 63 TYR n 1 64 GLU n 1 65 SER n 1 66 PRO n 1 67 MET n 1 68 GLU n 1 69 LEU n 1 70 CYS n 1 71 LYS n 1 72 ASP n 1 73 VAL n 1 74 ARG n 1 75 LEU n 1 76 ILE n 1 77 PHE n 1 78 SER n 1 79 ASN n 1 80 SER n 1 81 LYS n 1 82 ALA n 1 83 TYR n 1 84 THR n 1 85 PRO n 1 86 SER n 1 87 LYS n 1 88 ARG n 1 89 SER n 1 90 ARG n 1 91 ILE n 1 92 TYR n 1 93 SER n 1 94 MET n 1 95 SER n 1 96 LEU n 1 97 ARG n 1 98 LEU n 1 99 SER n 1 100 ALA n 1 101 PHE n 1 102 PHE n 1 103 GLU n 1 104 GLU n 1 105 HIS n 1 106 ILE n 1 107 SER n 1 108 SER n 1 109 VAL n 1 110 LEU n 1 111 SER n 1 112 ASP n 1 113 TYR n 1 114 LYS n 1 115 SER n 1 116 ALA n 1 117 LEU n 1 118 ARG n 1 119 PHE n 1 120 HIS n 1 121 LYS n 1 122 ARG n 1 123 ASN n 1 124 THR n 1 125 ILE n 1 126 THR n 1 127 LYS n 1 128 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PHIP, DCAF14, WDR11' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1BN non-polymer . 1-BENZYL-1H-IMIDAZOLE 1-BENZYLIMIDAZOLE 'C10 H10 N2' 158.200 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1313 ? ? ? A . n A 1 2 MET 2 1314 ? ? ? A . n A 1 3 SER 3 1315 ? ? ? A . n A 1 4 TYR 4 1316 1316 TYR TYR A . n A 1 5 ASP 5 1317 1317 ASP ASP A . n A 1 6 ILE 6 1318 1318 ILE ILE A . n A 1 7 GLN 7 1319 1319 GLN GLN A . n A 1 8 ALA 8 1320 1320 ALA ALA A . n A 1 9 TRP 9 1321 1321 TRP TRP A . n A 1 10 LYS 10 1322 1322 LYS LYS A . n A 1 11 LYS 11 1323 1323 LYS LYS A . n A 1 12 GLN 12 1324 1324 GLN GLN A . n A 1 13 CYS 13 1325 1325 CYS CYS A . n A 1 14 GLU 14 1326 1326 GLU GLU A . n A 1 15 GLU 15 1327 1327 GLU GLU A . n A 1 16 LEU 16 1328 1328 LEU LEU A . n A 1 17 LEU 17 1329 1329 LEU LEU A . n A 1 18 ASN 18 1330 1330 ASN ASN A . n A 1 19 LEU 19 1331 1331 LEU LEU A . n A 1 20 ILE 20 1332 1332 ILE ILE A . n A 1 21 PHE 21 1333 1333 PHE PHE A . n A 1 22 GLN 22 1334 1334 GLN GLN A . n A 1 23 CYS 23 1335 1335 CYS CYS A . n A 1 24 GLU 24 1336 1336 GLU GLU A . n A 1 25 ASP 25 1337 1337 ASP ASP A . n A 1 26 SER 26 1338 1338 SER SER A . n A 1 27 GLU 27 1339 1339 GLU GLU A . n A 1 28 PRO 28 1340 1340 PRO PRO A . n A 1 29 PHE 29 1341 1341 PHE PHE A . n A 1 30 ARG 30 1342 1342 ARG ARG A . n A 1 31 GLN 31 1343 1343 GLN GLN A . n A 1 32 PRO 32 1344 1344 PRO PRO A . n A 1 33 VAL 33 1345 1345 VAL VAL A . n A 1 34 ASP 34 1346 1346 ASP ASP A . n A 1 35 LEU 35 1347 1347 LEU LEU A . n A 1 36 LEU 36 1348 1348 LEU LEU A . n A 1 37 GLU 37 1349 1349 GLU GLU A . n A 1 38 TYR 38 1350 1350 TYR TYR A . n A 1 39 PRO 39 1351 1351 PRO PRO A . n A 1 40 ASP 40 1352 1352 ASP ASP A . n A 1 41 TYR 41 1353 1353 TYR TYR A . n A 1 42 ARG 42 1354 1354 ARG ARG A . n A 1 43 ASP 43 1355 1355 ASP ASP A . n A 1 44 ILE 44 1356 1356 ILE ILE A . n A 1 45 ILE 45 1357 1357 ILE ILE A . n A 1 46 ASP 46 1358 1358 ASP ASP A . n A 1 47 THR 47 1359 1359 THR THR A . n A 1 48 PRO 48 1360 1360 PRO PRO A . n A 1 49 MET 49 1361 1361 MET MET A . n A 1 50 ASP 50 1362 1362 ASP ASP A . n A 1 51 PHE 51 1363 1363 PHE PHE A . n A 1 52 ALA 52 1364 1364 ALA ALA A . n A 1 53 THR 53 1365 1365 THR THR A . n A 1 54 VAL 54 1366 1366 VAL VAL A . n A 1 55 ARG 55 1367 1367 ARG ARG A . n A 1 56 GLU 56 1368 1368 GLU GLU A . n A 1 57 THR 57 1369 1369 THR THR A . n A 1 58 LEU 58 1370 1370 LEU LEU A . n A 1 59 GLU 59 1371 1371 GLU GLU A . n A 1 60 ALA 60 1372 1372 ALA ALA A . n A 1 61 GLY 61 1373 1373 GLY GLY A . n A 1 62 ASN 62 1374 1374 ASN ASN A . n A 1 63 TYR 63 1375 1375 TYR TYR A . n A 1 64 GLU 64 1376 1376 GLU GLU A . n A 1 65 SER 65 1377 1377 SER SER A . n A 1 66 PRO 66 1378 1378 PRO PRO A . n A 1 67 MET 67 1379 1379 MET MET A . n A 1 68 GLU 68 1380 1380 GLU GLU A . n A 1 69 LEU 69 1381 1381 LEU LEU A . n A 1 70 CYS 70 1382 1382 CYS CYS A . n A 1 71 LYS 71 1383 1383 LYS LYS A . n A 1 72 ASP 72 1384 1384 ASP ASP A . n A 1 73 VAL 73 1385 1385 VAL VAL A . n A 1 74 ARG 74 1386 1386 ARG ARG A . n A 1 75 LEU 75 1387 1387 LEU LEU A . n A 1 76 ILE 76 1388 1388 ILE ILE A . n A 1 77 PHE 77 1389 1389 PHE PHE A . n A 1 78 SER 78 1390 1390 SER SER A . n A 1 79 ASN 79 1391 1391 ASN ASN A . n A 1 80 SER 80 1392 1392 SER SER A . n A 1 81 LYS 81 1393 1393 LYS LYS A . n A 1 82 ALA 82 1394 1394 ALA ALA A . n A 1 83 TYR 83 1395 1395 TYR TYR A . n A 1 84 THR 84 1396 1396 THR THR A . n A 1 85 PRO 85 1397 1397 PRO PRO A . n A 1 86 SER 86 1398 1398 SER SER A . n A 1 87 LYS 87 1399 1399 LYS LYS A . n A 1 88 ARG 88 1400 1400 ARG ARG A . n A 1 89 SER 89 1401 1401 SER SER A . n A 1 90 ARG 90 1402 1402 ARG ARG A . n A 1 91 ILE 91 1403 1403 ILE ILE A . n A 1 92 TYR 92 1404 1404 TYR TYR A . n A 1 93 SER 93 1405 1405 SER SER A . n A 1 94 MET 94 1406 1406 MET MET A . n A 1 95 SER 95 1407 1407 SER SER A . n A 1 96 LEU 96 1408 1408 LEU LEU A . n A 1 97 ARG 97 1409 1409 ARG ARG A . n A 1 98 LEU 98 1410 1410 LEU LEU A . n A 1 99 SER 99 1411 1411 SER SER A . n A 1 100 ALA 100 1412 1412 ALA ALA A . n A 1 101 PHE 101 1413 1413 PHE PHE A . n A 1 102 PHE 102 1414 1414 PHE PHE A . n A 1 103 GLU 103 1415 1415 GLU GLU A . n A 1 104 GLU 104 1416 1416 GLU GLU A . n A 1 105 HIS 105 1417 1417 HIS HIS A . n A 1 106 ILE 106 1418 1418 ILE ILE A . n A 1 107 SER 107 1419 1419 SER SER A . n A 1 108 SER 108 1420 1420 SER SER A . n A 1 109 VAL 109 1421 1421 VAL VAL A . n A 1 110 LEU 110 1422 1422 LEU LEU A . n A 1 111 SER 111 1423 1423 SER SER A . n A 1 112 ASP 112 1424 1424 ASP ASP A . n A 1 113 TYR 113 1425 1425 TYR TYR A . n A 1 114 LYS 114 1426 1426 LYS LYS A . n A 1 115 SER 115 1427 1427 SER SER A . n A 1 116 ALA 116 1428 1428 ALA ALA A . n A 1 117 LEU 117 1429 1429 LEU LEU A . n A 1 118 ARG 118 1430 1430 ARG ARG A . n A 1 119 PHE 119 1431 1431 PHE PHE A . n A 1 120 HIS 120 1432 1432 HIS HIS A . n A 1 121 LYS 121 1433 1433 LYS LYS A . n A 1 122 ARG 122 1434 1434 ARG ARG A . n A 1 123 ASN 123 1435 ? ? ? A . n A 1 124 THR 124 1436 ? ? ? A . n A 1 125 ILE 125 1437 ? ? ? A . n A 1 126 THR 126 1438 ? ? ? A . n A 1 127 LYS 127 1439 ? ? ? A . n A 1 128 ARG 128 1440 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1BN 1 1501 1 1BN LIG A . C 3 HOH 1 1601 3 HOH HOH A . C 3 HOH 2 1602 49 HOH HOH A . C 3 HOH 3 1603 73 HOH HOH A . C 3 HOH 4 1604 82 HOH HOH A . C 3 HOH 5 1605 46 HOH HOH A . C 3 HOH 6 1606 57 HOH HOH A . C 3 HOH 7 1607 74 HOH HOH A . C 3 HOH 8 1608 39 HOH HOH A . C 3 HOH 9 1609 9 HOH HOH A . C 3 HOH 10 1610 38 HOH HOH A . C 3 HOH 11 1611 56 HOH HOH A . C 3 HOH 12 1612 70 HOH HOH A . C 3 HOH 13 1613 16 HOH HOH A . C 3 HOH 14 1614 98 HOH HOH A . C 3 HOH 15 1615 22 HOH HOH A . C 3 HOH 16 1616 99 HOH HOH A . C 3 HOH 17 1617 79 HOH HOH A . C 3 HOH 18 1618 20 HOH HOH A . C 3 HOH 19 1619 75 HOH HOH A . C 3 HOH 20 1620 2 HOH HOH A . C 3 HOH 21 1621 23 HOH HOH A . C 3 HOH 22 1622 6 HOH HOH A . C 3 HOH 23 1623 72 HOH HOH A . C 3 HOH 24 1624 48 HOH HOH A . C 3 HOH 25 1625 34 HOH HOH A . C 3 HOH 26 1626 68 HOH HOH A . C 3 HOH 27 1627 101 HOH HOH A . C 3 HOH 28 1628 69 HOH HOH A . C 3 HOH 29 1629 60 HOH HOH A . C 3 HOH 30 1630 28 HOH HOH A . C 3 HOH 31 1631 27 HOH HOH A . C 3 HOH 32 1632 1 HOH HOH A . C 3 HOH 33 1633 21 HOH HOH A . C 3 HOH 34 1634 65 HOH HOH A . C 3 HOH 35 1635 30 HOH HOH A . C 3 HOH 36 1636 45 HOH HOH A . C 3 HOH 37 1637 4 HOH HOH A . C 3 HOH 38 1638 24 HOH HOH A . C 3 HOH 39 1639 53 HOH HOH A . C 3 HOH 40 1640 26 HOH HOH A . C 3 HOH 41 1641 19 HOH HOH A . C 3 HOH 42 1642 36 HOH HOH A . C 3 HOH 43 1643 71 HOH HOH A . C 3 HOH 44 1644 47 HOH HOH A . C 3 HOH 45 1645 102 HOH HOH A . C 3 HOH 46 1646 80 HOH HOH A . C 3 HOH 47 1647 25 HOH HOH A . C 3 HOH 48 1648 93 HOH HOH A . C 3 HOH 49 1649 87 HOH HOH A . C 3 HOH 50 1650 76 HOH HOH A . C 3 HOH 51 1651 103 HOH HOH A . C 3 HOH 52 1652 5 HOH HOH A . C 3 HOH 53 1653 8 HOH HOH A . C 3 HOH 54 1654 59 HOH HOH A . C 3 HOH 55 1655 14 HOH HOH A . C 3 HOH 56 1656 84 HOH HOH A . C 3 HOH 57 1657 78 HOH HOH A . C 3 HOH 58 1658 12 HOH HOH A . C 3 HOH 59 1659 43 HOH HOH A . C 3 HOH 60 1660 18 HOH HOH A . C 3 HOH 61 1661 42 HOH HOH A . C 3 HOH 62 1662 35 HOH HOH A . C 3 HOH 63 1663 50 HOH HOH A . C 3 HOH 64 1664 33 HOH HOH A . C 3 HOH 65 1665 61 HOH HOH A . C 3 HOH 66 1666 44 HOH HOH A . C 3 HOH 67 1667 11 HOH HOH A . C 3 HOH 68 1668 51 HOH HOH A . C 3 HOH 69 1669 10 HOH HOH A . C 3 HOH 70 1670 58 HOH HOH A . C 3 HOH 71 1671 64 HOH HOH A . C 3 HOH 72 1672 52 HOH HOH A . C 3 HOH 73 1673 97 HOH HOH A . C 3 HOH 74 1674 94 HOH HOH A . C 3 HOH 75 1675 31 HOH HOH A . C 3 HOH 76 1676 67 HOH HOH A . C 3 HOH 77 1677 7 HOH HOH A . C 3 HOH 78 1678 88 HOH HOH A . C 3 HOH 79 1679 15 HOH HOH A . C 3 HOH 80 1680 55 HOH HOH A . C 3 HOH 81 1681 13 HOH HOH A . C 3 HOH 82 1682 105 HOH HOH A . C 3 HOH 83 1683 17 HOH HOH A . C 3 HOH 84 1684 54 HOH HOH A . C 3 HOH 85 1685 86 HOH HOH A . C 3 HOH 86 1686 104 HOH HOH A . C 3 HOH 87 1687 66 HOH HOH A . C 3 HOH 88 1688 83 HOH HOH A . C 3 HOH 89 1689 90 HOH HOH A . C 3 HOH 90 1690 95 HOH HOH A . C 3 HOH 91 1691 92 HOH HOH A . C 3 HOH 92 1692 29 HOH HOH A . C 3 HOH 93 1693 63 HOH HOH A . C 3 HOH 94 1694 41 HOH HOH A . C 3 HOH 95 1695 62 HOH HOH A . C 3 HOH 96 1696 96 HOH HOH A . C 3 HOH 97 1697 81 HOH HOH A . C 3 HOH 98 1698 106 HOH HOH A . C 3 HOH 99 1699 40 HOH HOH A . C 3 HOH 100 1700 100 HOH HOH A . C 3 HOH 101 1701 85 HOH HOH A . C 3 HOH 102 1702 32 HOH HOH A . C 3 HOH 103 1703 89 HOH HOH A . C 3 HOH 104 1704 91 HOH HOH A . C 3 HOH 105 1705 77 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1323 ? CE ? A LYS 11 CE 2 1 Y 1 A LYS 1323 ? NZ ? A LYS 11 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.8.0267 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 Aimless 0.5.26 06/05/16 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.22 'July. 13, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # _cell.entry_id 5S8M _cell.length_a 82.910 _cell.length_b 27.350 _cell.length_c 56.520 _cell.angle_alpha 90.000 _cell.angle_beta 99.420 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S8M _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.crystals_number 1 _exptl.entry_id 5S8M _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 41.02 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.04M potassium phosphate monobasic -- 12% PEG8K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2016-06-23 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92819 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.92819 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.d_resolution_high 1.200 _reflns.d_resolution_low 40.900 _reflns.pdbx_number_measured_all 107711 _reflns.number_obs 37842 _reflns.pdbx_Rmerge_I_obs 0.030 _reflns.pdbx_netI_over_sigmaI 16.100 _reflns.pdbx_redundancy 2.800 _reflns.percent_possible_obs 95.900 _reflns.pdbx_Rrim_I_all 0.036 _reflns.pdbx_Rpim_I_all 0.020 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5S8M _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.200 1.230 ? 4588 ? 0 0.608 ? ? ? 1.900 ? 1.200 ? 2445 ? ? ? ? 84.700 0.821 0.547 0.677 1 2 5.370 40.900 ? 1415 ? 0 0.017 ? ? ? 3.000 ? 53.200 ? 476 ? ? ? ? 97.500 0.021 0.012 0.999 # _refine.entry_id 5S8M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.2000 _refine.ls_d_res_low 40.9000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.5800 _refine.ls_number_reflns_obs 35926 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1660 _refine.ls_R_factor_R_work 0.1650 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1846 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1914 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.0410 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.9900 _refine.aniso_B[2][2] -1.1200 _refine.aniso_B[3][3] -0.5000 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 2.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9740 _refine.correlation_coeff_Fo_to_Fc_free 0.9740 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0430 _refine.pdbx_overall_ESU_R_Free 0.0410 _refine.overall_SU_ML 0.0470 _refine.overall_SU_B 2.6090 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 7AV9 _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 74.870 _refine.B_iso_min 12.720 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.2000 _refine_hist.d_res_low 40.9000 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 1107 _refine_hist.pdbx_number_residues_total 119 _refine_hist.pdbx_B_iso_mean_ligand 23.38 _refine_hist.pdbx_B_iso_mean_solvent 28.06 _refine_hist.pdbx_number_atoms_protein 990 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1070 0.018 0.013 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 966 0.012 0.017 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1452 2.007 1.647 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2242 1.740 1.581 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 130 5.293 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 63 24.646 21.587 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 189 12.930 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 9 10.752 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 135 0.114 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1227 0.012 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 264 0.009 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 505 2.043 1.766 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 504 1.871 1.762 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 640 2.179 2.670 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2036 7.964 3.000 ? ? # _refine_ls_shell.d_res_high 1.2000 _refine_ls_shell.d_res_low 1.2310 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 84.0400 _refine_ls_shell.number_reflns_R_work 2307 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3220 _refine_ls_shell.R_factor_R_free 0.3290 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 136 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2443 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5S8M _struct.title ;XChem group deposition -- Crystal Structure of the second bromodomain of pleckstrin homology domain interacting protein (PHIP) in complex with N11511a (space group C2) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5S8M _struct_keywords.text 'SGC - Diamond I04-1 fragment screening, bromodomain, PHIP, XChemExplorer, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PHIP_HUMAN _struct_ref.pdbx_db_accession Q8WWQ0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKA YTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR ; _struct_ref.pdbx_align_begin 1315 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5S8M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8WWQ0 _struct_ref_seq.db_align_beg 1315 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1440 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1315 _struct_ref_seq.pdbx_auth_seq_align_end 1440 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5S8M SER A 1 ? UNP Q8WWQ0 ? ? 'expression tag' 1313 1 1 5S8M MET A 2 ? UNP Q8WWQ0 ? ? 'expression tag' 1314 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 8 ? CYS A 23 ? ALA A 1320 CYS A 1335 1 ? 16 HELX_P HELX_P2 AA2 GLU A 24 ? ARG A 30 ? GLU A 1336 ARG A 1342 5 ? 7 HELX_P HELX_P3 AA3 ASP A 40 ? ILE A 45 ? ASP A 1352 ILE A 1357 1 ? 6 HELX_P HELX_P4 AA4 ASP A 50 ? ALA A 60 ? ASP A 1362 ALA A 1372 1 ? 11 HELX_P HELX_P5 AA5 SER A 65 ? THR A 84 ? SER A 1377 THR A 1396 1 ? 20 HELX_P HELX_P6 AA6 SER A 89 ? LYS A 121 ? SER A 1401 LYS A 1433 1 ? 33 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 1BN _struct_site.pdbx_auth_seq_id 1501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue 1BN A 1501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PRO A 28 ? PRO A 1340 . ? 1_555 ? 2 AC1 6 TYR A 38 ? TYR A 1350 . ? 1_555 ? 3 AC1 6 SER A 80 ? SER A 1392 . ? 1_555 ? 4 AC1 6 TYR A 83 ? TYR A 1395 . ? 1_555 ? 5 AC1 6 SER A 89 ? SER A 1401 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 1696 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 1346 ? ? O A HOH 1601 ? ? 2.09 2 1 O A HOH 1682 ? ? O A HOH 1686 ? ? 2.14 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CA _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 SER _pdbx_validate_rmsd_bond.auth_seq_id_1 1423 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CB _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 SER _pdbx_validate_rmsd_bond.auth_seq_id_2 1423 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.637 _pdbx_validate_rmsd_bond.bond_target_value 1.525 _pdbx_validate_rmsd_bond.bond_deviation 0.112 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 1316 ? ? CG A TYR 1316 ? ? CD2 A TYR 1316 ? ? 117.11 121.00 -3.89 0.60 N 2 1 CB A TYR 1316 ? ? CG A TYR 1316 ? ? CD1 A TYR 1316 ? ? 125.09 121.00 4.09 0.60 N 3 1 CB A TYR 1404 ? ? CG A TYR 1404 ? ? CD1 A TYR 1404 ? ? 124.79 121.00 3.79 0.60 N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1702 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _phasing.method MR # _pdbx_entry_details.entry_id 5S8M _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1313 ? A SER 1 2 1 Y 1 A MET 1314 ? A MET 2 3 1 Y 1 A SER 1315 ? A SER 3 4 1 Y 1 A ASN 1435 ? A ASN 123 5 1 Y 1 A THR 1436 ? A THR 124 6 1 Y 1 A ILE 1437 ? A ILE 125 7 1 Y 1 A THR 1438 ? A THR 126 8 1 Y 1 A LYS 1439 ? A LYS 127 9 1 Y 1 A ARG 1440 ? A ARG 128 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1BN C1 C Y N 1 1BN C2 C Y N 2 1BN N1 N Y N 3 1BN C3 C Y N 4 1BN N2 N Y N 5 1BN C4 C N N 6 1BN C5 C Y N 7 1BN C6 C Y N 8 1BN C7 C Y N 9 1BN C8 C Y N 10 1BN C9 C Y N 11 1BN C10 C Y N 12 1BN H1 H N N 13 1BN H2 H N N 14 1BN H3 H N N 15 1BN H41 H N N 16 1BN H42 H N N 17 1BN H6 H N N 18 1BN H7 H N N 19 1BN H8 H N N 20 1BN H9 H N N 21 1BN H10 H N N 22 ALA N N N N 23 ALA CA C N S 24 ALA C C N N 25 ALA O O N N 26 ALA CB C N N 27 ALA OXT O N N 28 ALA H H N N 29 ALA H2 H N N 30 ALA HA H N N 31 ALA HB1 H N N 32 ALA HB2 H N N 33 ALA HB3 H N N 34 ALA HXT H N N 35 ARG N N N N 36 ARG CA C N S 37 ARG C C N N 38 ARG O O N N 39 ARG CB C N N 40 ARG CG C N N 41 ARG CD C N N 42 ARG NE N N N 43 ARG CZ C N N 44 ARG NH1 N N N 45 ARG NH2 N N N 46 ARG OXT O N N 47 ARG H H N N 48 ARG H2 H N N 49 ARG HA H N N 50 ARG HB2 H N N 51 ARG HB3 H N N 52 ARG HG2 H N N 53 ARG HG3 H N N 54 ARG HD2 H N N 55 ARG HD3 H N N 56 ARG HE H N N 57 ARG HH11 H N N 58 ARG HH12 H N N 59 ARG HH21 H N N 60 ARG HH22 H N N 61 ARG HXT H N N 62 ASN N N N N 63 ASN CA C N S 64 ASN C C N N 65 ASN O O N N 66 ASN CB C N N 67 ASN CG C N N 68 ASN OD1 O N N 69 ASN ND2 N N N 70 ASN OXT O N N 71 ASN H H N N 72 ASN H2 H N N 73 ASN HA H N N 74 ASN HB2 H N N 75 ASN HB3 H N N 76 ASN HD21 H N N 77 ASN HD22 H N N 78 ASN HXT H N N 79 ASP N N N N 80 ASP CA C N S 81 ASP C C N N 82 ASP O O N N 83 ASP CB C N N 84 ASP CG C N N 85 ASP OD1 O N N 86 ASP OD2 O N N 87 ASP OXT O N N 88 ASP H H N N 89 ASP H2 H N N 90 ASP HA H N N 91 ASP HB2 H N N 92 ASP HB3 H N N 93 ASP HD2 H N N 94 ASP HXT H N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HIS N N N N 159 HIS CA C N S 160 HIS C C N N 161 HIS O O N N 162 HIS CB C N N 163 HIS CG C Y N 164 HIS ND1 N Y N 165 HIS CD2 C Y N 166 HIS CE1 C Y N 167 HIS NE2 N Y N 168 HIS OXT O N N 169 HIS H H N N 170 HIS H2 H N N 171 HIS HA H N N 172 HIS HB2 H N N 173 HIS HB3 H N N 174 HIS HD1 H N N 175 HIS HD2 H N N 176 HIS HE1 H N N 177 HIS HE2 H N N 178 HIS HXT H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 ILE N N N N 183 ILE CA C N S 184 ILE C C N N 185 ILE O O N N 186 ILE CB C N S 187 ILE CG1 C N N 188 ILE CG2 C N N 189 ILE CD1 C N N 190 ILE OXT O N N 191 ILE H H N N 192 ILE H2 H N N 193 ILE HA H N N 194 ILE HB H N N 195 ILE HG12 H N N 196 ILE HG13 H N N 197 ILE HG21 H N N 198 ILE HG22 H N N 199 ILE HG23 H N N 200 ILE HD11 H N N 201 ILE HD12 H N N 202 ILE HD13 H N N 203 ILE HXT H N N 204 LEU N N N N 205 LEU CA C N S 206 LEU C C N N 207 LEU O O N N 208 LEU CB C N N 209 LEU CG C N N 210 LEU CD1 C N N 211 LEU CD2 C N N 212 LEU OXT O N N 213 LEU H H N N 214 LEU H2 H N N 215 LEU HA H N N 216 LEU HB2 H N N 217 LEU HB3 H N N 218 LEU HG H N N 219 LEU HD11 H N N 220 LEU HD12 H N N 221 LEU HD13 H N N 222 LEU HD21 H N N 223 LEU HD22 H N N 224 LEU HD23 H N N 225 LEU HXT H N N 226 LYS N N N N 227 LYS CA C N S 228 LYS C C N N 229 LYS O O N N 230 LYS CB C N N 231 LYS CG C N N 232 LYS CD C N N 233 LYS CE C N N 234 LYS NZ N N N 235 LYS OXT O N N 236 LYS H H N N 237 LYS H2 H N N 238 LYS HA H N N 239 LYS HB2 H N N 240 LYS HB3 H N N 241 LYS HG2 H N N 242 LYS HG3 H N N 243 LYS HD2 H N N 244 LYS HD3 H N N 245 LYS HE2 H N N 246 LYS HE3 H N N 247 LYS HZ1 H N N 248 LYS HZ2 H N N 249 LYS HZ3 H N N 250 LYS HXT H N N 251 MET N N N N 252 MET CA C N S 253 MET C C N N 254 MET O O N N 255 MET CB C N N 256 MET CG C N N 257 MET SD S N N 258 MET CE C N N 259 MET OXT O N N 260 MET H H N N 261 MET H2 H N N 262 MET HA H N N 263 MET HB2 H N N 264 MET HB3 H N N 265 MET HG2 H N N 266 MET HG3 H N N 267 MET HE1 H N N 268 MET HE2 H N N 269 MET HE3 H N N 270 MET HXT H N N 271 PHE N N N N 272 PHE CA C N S 273 PHE C C N N 274 PHE O O N N 275 PHE CB C N N 276 PHE CG C Y N 277 PHE CD1 C Y N 278 PHE CD2 C Y N 279 PHE CE1 C Y N 280 PHE CE2 C Y N 281 PHE CZ C Y N 282 PHE OXT O N N 283 PHE H H N N 284 PHE H2 H N N 285 PHE HA H N N 286 PHE HB2 H N N 287 PHE HB3 H N N 288 PHE HD1 H N N 289 PHE HD2 H N N 290 PHE HE1 H N N 291 PHE HE2 H N N 292 PHE HZ H N N 293 PHE HXT H N N 294 PRO N N N N 295 PRO CA C N S 296 PRO C C N N 297 PRO O O N N 298 PRO CB C N N 299 PRO CG C N N 300 PRO CD C N N 301 PRO OXT O N N 302 PRO H H N N 303 PRO HA H N N 304 PRO HB2 H N N 305 PRO HB3 H N N 306 PRO HG2 H N N 307 PRO HG3 H N N 308 PRO HD2 H N N 309 PRO HD3 H N N 310 PRO HXT H N N 311 SER N N N N 312 SER CA C N S 313 SER C C N N 314 SER O O N N 315 SER CB C N N 316 SER OG O N N 317 SER OXT O N N 318 SER H H N N 319 SER H2 H N N 320 SER HA H N N 321 SER HB2 H N N 322 SER HB3 H N N 323 SER HG H N N 324 SER HXT H N N 325 THR N N N N 326 THR CA C N S 327 THR C C N N 328 THR O O N N 329 THR CB C N R 330 THR OG1 O N N 331 THR CG2 C N N 332 THR OXT O N N 333 THR H H N N 334 THR H2 H N N 335 THR HA H N N 336 THR HB H N N 337 THR HG1 H N N 338 THR HG21 H N N 339 THR HG22 H N N 340 THR HG23 H N N 341 THR HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1BN C1 C2 doub Y N 1 1BN C1 N1 sing Y N 2 1BN C1 H1 sing N N 3 1BN C2 N2 sing Y N 4 1BN C2 H2 sing N N 5 1BN N1 C3 sing Y N 6 1BN N1 C4 sing N N 7 1BN C3 N2 doub Y N 8 1BN C3 H3 sing N N 9 1BN C4 C5 sing N N 10 1BN C4 H41 sing N N 11 1BN C4 H42 sing N N 12 1BN C5 C6 doub Y N 13 1BN C5 C7 sing Y N 14 1BN C6 C8 sing Y N 15 1BN C6 H6 sing N N 16 1BN C7 C9 doub Y N 17 1BN C7 H7 sing N N 18 1BN C8 C10 doub Y N 19 1BN C8 H8 sing N N 20 1BN C9 C10 sing Y N 21 1BN C9 H9 sing N N 22 1BN C10 H10 sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 CYS N CA sing N N 93 CYS N H sing N N 94 CYS N H2 sing N N 95 CYS CA C sing N N 96 CYS CA CB sing N N 97 CYS CA HA sing N N 98 CYS C O doub N N 99 CYS C OXT sing N N 100 CYS CB SG sing N N 101 CYS CB HB2 sing N N 102 CYS CB HB3 sing N N 103 CYS SG HG sing N N 104 CYS OXT HXT sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 HOH O H1 sing N N 173 HOH O H2 sing N N 174 ILE N CA sing N N 175 ILE N H sing N N 176 ILE N H2 sing N N 177 ILE CA C sing N N 178 ILE CA CB sing N N 179 ILE CA HA sing N N 180 ILE C O doub N N 181 ILE C OXT sing N N 182 ILE CB CG1 sing N N 183 ILE CB CG2 sing N N 184 ILE CB HB sing N N 185 ILE CG1 CD1 sing N N 186 ILE CG1 HG12 sing N N 187 ILE CG1 HG13 sing N N 188 ILE CG2 HG21 sing N N 189 ILE CG2 HG22 sing N N 190 ILE CG2 HG23 sing N N 191 ILE CD1 HD11 sing N N 192 ILE CD1 HD12 sing N N 193 ILE CD1 HD13 sing N N 194 ILE OXT HXT sing N N 195 LEU N CA sing N N 196 LEU N H sing N N 197 LEU N H2 sing N N 198 LEU CA C sing N N 199 LEU CA CB sing N N 200 LEU CA HA sing N N 201 LEU C O doub N N 202 LEU C OXT sing N N 203 LEU CB CG sing N N 204 LEU CB HB2 sing N N 205 LEU CB HB3 sing N N 206 LEU CG CD1 sing N N 207 LEU CG CD2 sing N N 208 LEU CG HG sing N N 209 LEU CD1 HD11 sing N N 210 LEU CD1 HD12 sing N N 211 LEU CD1 HD13 sing N N 212 LEU CD2 HD21 sing N N 213 LEU CD2 HD22 sing N N 214 LEU CD2 HD23 sing N N 215 LEU OXT HXT sing N N 216 LYS N CA sing N N 217 LYS N H sing N N 218 LYS N H2 sing N N 219 LYS CA C sing N N 220 LYS CA CB sing N N 221 LYS CA HA sing N N 222 LYS C O doub N N 223 LYS C OXT sing N N 224 LYS CB CG sing N N 225 LYS CB HB2 sing N N 226 LYS CB HB3 sing N N 227 LYS CG CD sing N N 228 LYS CG HG2 sing N N 229 LYS CG HG3 sing N N 230 LYS CD CE sing N N 231 LYS CD HD2 sing N N 232 LYS CD HD3 sing N N 233 LYS CE NZ sing N N 234 LYS CE HE2 sing N N 235 LYS CE HE3 sing N N 236 LYS NZ HZ1 sing N N 237 LYS NZ HZ2 sing N N 238 LYS NZ HZ3 sing N N 239 LYS OXT HXT sing N N 240 MET N CA sing N N 241 MET N H sing N N 242 MET N H2 sing N N 243 MET CA C sing N N 244 MET CA CB sing N N 245 MET CA HA sing N N 246 MET C O doub N N 247 MET C OXT sing N N 248 MET CB CG sing N N 249 MET CB HB2 sing N N 250 MET CB HB3 sing N N 251 MET CG SD sing N N 252 MET CG HG2 sing N N 253 MET CG HG3 sing N N 254 MET SD CE sing N N 255 MET CE HE1 sing N N 256 MET CE HE2 sing N N 257 MET CE HE3 sing N N 258 MET OXT HXT sing N N 259 PHE N CA sing N N 260 PHE N H sing N N 261 PHE N H2 sing N N 262 PHE CA C sing N N 263 PHE CA CB sing N N 264 PHE CA HA sing N N 265 PHE C O doub N N 266 PHE C OXT sing N N 267 PHE CB CG sing N N 268 PHE CB HB2 sing N N 269 PHE CB HB3 sing N N 270 PHE CG CD1 doub Y N 271 PHE CG CD2 sing Y N 272 PHE CD1 CE1 sing Y N 273 PHE CD1 HD1 sing N N 274 PHE CD2 CE2 doub Y N 275 PHE CD2 HD2 sing N N 276 PHE CE1 CZ doub Y N 277 PHE CE1 HE1 sing N N 278 PHE CE2 CZ sing Y N 279 PHE CE2 HE2 sing N N 280 PHE CZ HZ sing N N 281 PHE OXT HXT sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 THR N CA sing N N 313 THR N H sing N N 314 THR N H2 sing N N 315 THR CA C sing N N 316 THR CA CB sing N N 317 THR CA HA sing N N 318 THR C O doub N N 319 THR C OXT sing N N 320 THR CB OG1 sing N N 321 THR CB CG2 sing N N 322 THR CB HB sing N N 323 THR OG1 HG1 sing N N 324 THR CG2 HG21 sing N N 325 THR CG2 HG22 sing N N 326 THR CG2 HG23 sing N N 327 THR OXT HXT sing N N 328 TRP N CA sing N N 329 TRP N H sing N N 330 TRP N H2 sing N N 331 TRP CA C sing N N 332 TRP CA CB sing N N 333 TRP CA HA sing N N 334 TRP C O doub N N 335 TRP C OXT sing N N 336 TRP CB CG sing N N 337 TRP CB HB2 sing N N 338 TRP CB HB3 sing N N 339 TRP CG CD1 doub Y N 340 TRP CG CD2 sing Y N 341 TRP CD1 NE1 sing Y N 342 TRP CD1 HD1 sing N N 343 TRP CD2 CE2 doub Y N 344 TRP CD2 CE3 sing Y N 345 TRP NE1 CE2 sing Y N 346 TRP NE1 HE1 sing N N 347 TRP CE2 CZ2 sing Y N 348 TRP CE3 CZ3 doub Y N 349 TRP CE3 HE3 sing N N 350 TRP CZ2 CH2 doub Y N 351 TRP CZ2 HZ2 sing N N 352 TRP CZ3 CH2 sing Y N 353 TRP CZ3 HZ3 sing N N 354 TRP CH2 HH2 sing N N 355 TRP OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # _pdbx_deposit_group.group_id G_1002187 _pdbx_deposit_group.group_description 'crystallographic fragment screen of human PHIP(2)' _pdbx_deposit_group.group_title 'XChem group deposition' _pdbx_deposit_group.group_type 'changed state' # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 1BN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 1BN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 5S8M _atom_sites.fract_transf_matrix[1][1] 0.012061 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.036563 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017935 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_