data_5SBL # _entry.id 5SBL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5SBL pdb_00005sbl 10.2210/pdb5sbl/pdb WWPDB D_1001404302 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-22 2 'Structure model' 1 1 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_entry_details 4 2 'Structure model' pdbx_modification_feature # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.entry_id 5SBL _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2021-09-14 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bradshaw, W.J.' 1 ? 'Katis, V.L.' 2 ? 'Bezerra, G.A.' 3 ? 'Koekemoer, L.' 4 ? 'von Delft, F.' 5 ? 'Bountra, C.' 6 ? 'Brennan, P.E.' 7 ? 'Gileadi, O.' 8 ? # _citation.id primary _citation.title 'CD44 PanDDA analysis group deposition' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Bradshaw, W.J.' ? 1 primary 'Katis, V.L.' ? 2 primary 'Bezerra, G.A.' ? 3 primary 'Koekemoer, L.' ? 4 primary 'von Delft, F.' ? 5 primary 'Bountra, C.' ? 6 primary 'Brennan, P.E.' ? 7 primary 'Gileadi, O.' ? 8 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD44 antigen' 16970.891 1 ? ? ? ? 2 non-polymer syn '2-[(methylsulfonyl)methyl]-1H-benzimidazole' 210.253 1 ? ? ? ? 3 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 3 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 251 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Extracellular matrix receptor III,ECMR-III,GP90 lymphocyte homing/adhesion receptor,HUTCH-I,Hermes antigen,Hyaluronate receptor,Lymphocyte antigen 24,Ly-24,Phagocytic glycoprotein 1,PGP-1,Phagocytic glycoprotein I,PGP-I ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICA ANHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDID ; _entity_poly.pdbx_seq_one_letter_code_can ;MNQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICA ANHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDID ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[(methylsulfonyl)methyl]-1H-benzimidazole' T6J 3 'DIMETHYL SULFOXIDE' DMS 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 GLN n 1 4 ILE n 1 5 ASP n 1 6 LEU n 1 7 ASN n 1 8 VAL n 1 9 THR n 1 10 CYS n 1 11 ARG n 1 12 TYR n 1 13 ALA n 1 14 GLY n 1 15 VAL n 1 16 PHE n 1 17 HIS n 1 18 VAL n 1 19 GLU n 1 20 LYS n 1 21 ASN n 1 22 GLY n 1 23 ARG n 1 24 TYR n 1 25 SER n 1 26 ILE n 1 27 SER n 1 28 ARG n 1 29 THR n 1 30 GLU n 1 31 ALA n 1 32 ALA n 1 33 ASP n 1 34 LEU n 1 35 CYS n 1 36 GLN n 1 37 ALA n 1 38 PHE n 1 39 ASN n 1 40 SER n 1 41 THR n 1 42 LEU n 1 43 PRO n 1 44 THR n 1 45 MET n 1 46 ASP n 1 47 GLN n 1 48 MET n 1 49 LYS n 1 50 LEU n 1 51 ALA n 1 52 LEU n 1 53 SER n 1 54 LYS n 1 55 GLY n 1 56 PHE n 1 57 GLU n 1 58 THR n 1 59 CYS n 1 60 ARG n 1 61 TYR n 1 62 GLY n 1 63 PHE n 1 64 ILE n 1 65 GLU n 1 66 GLY n 1 67 ASN n 1 68 VAL n 1 69 VAL n 1 70 ILE n 1 71 PRO n 1 72 ARG n 1 73 ILE n 1 74 HIS n 1 75 PRO n 1 76 ASN n 1 77 ALA n 1 78 ILE n 1 79 CYS n 1 80 ALA n 1 81 ALA n 1 82 ASN n 1 83 HIS n 1 84 THR n 1 85 GLY n 1 86 VAL n 1 87 TYR n 1 88 ILE n 1 89 LEU n 1 90 VAL n 1 91 THR n 1 92 SER n 1 93 ASN n 1 94 THR n 1 95 SER n 1 96 HIS n 1 97 TYR n 1 98 ASP n 1 99 THR n 1 100 TYR n 1 101 CYS n 1 102 PHE n 1 103 ASN n 1 104 ALA n 1 105 SER n 1 106 ALA n 1 107 PRO n 1 108 PRO n 1 109 GLU n 1 110 GLU n 1 111 ASP n 1 112 CYS n 1 113 THR n 1 114 SER n 1 115 VAL n 1 116 THR n 1 117 ASP n 1 118 LEU n 1 119 PRO n 1 120 ASN n 1 121 SER n 1 122 PHE n 1 123 ASP n 1 124 GLY n 1 125 PRO n 1 126 VAL n 1 127 THR n 1 128 ILE n 1 129 THR n 1 130 ILE n 1 131 VAL n 1 132 ASN n 1 133 ARG n 1 134 ASP n 1 135 GLY n 1 136 THR n 1 137 ARG n 1 138 TYR n 1 139 SER n 1 140 LYS n 1 141 LYS n 1 142 GLY n 1 143 GLU n 1 144 TYR n 1 145 ARG n 1 146 THR n 1 147 HIS n 1 148 GLN n 1 149 GLU n 1 150 ASP n 1 151 ILE n 1 152 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 152 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Cd44, Ly-24' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 T6J non-polymer . '2-[(methylsulfonyl)methyl]-1H-benzimidazole' ? 'C9 H10 N2 O2 S' 210.253 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 23 ? ? ? A . n A 1 2 ASN 2 24 ? ? ? A . n A 1 3 GLN 3 25 25 GLN GLN A . n A 1 4 ILE 4 26 26 ILE ILE A . n A 1 5 ASP 5 27 27 ASP ASP A . n A 1 6 LEU 6 28 28 LEU LEU A . n A 1 7 ASN 7 29 29 ASN ASN A . n A 1 8 VAL 8 30 30 VAL VAL A . n A 1 9 THR 9 31 31 THR THR A . n A 1 10 CYS 10 32 32 CYS CYS A . n A 1 11 ARG 11 33 33 ARG ARG A . n A 1 12 TYR 12 34 34 TYR TYR A . n A 1 13 ALA 13 35 35 ALA ALA A . n A 1 14 GLY 14 36 36 GLY GLY A . n A 1 15 VAL 15 37 37 VAL VAL A . n A 1 16 PHE 16 38 38 PHE PHE A . n A 1 17 HIS 17 39 39 HIS HIS A . n A 1 18 VAL 18 40 40 VAL VAL A . n A 1 19 GLU 19 41 41 GLU GLU A . n A 1 20 LYS 20 42 42 LYS LYS A . n A 1 21 ASN 21 43 43 ASN ASN A . n A 1 22 GLY 22 44 44 GLY GLY A . n A 1 23 ARG 23 45 45 ARG ARG A . n A 1 24 TYR 24 46 46 TYR TYR A . n A 1 25 SER 25 47 47 SER SER A . n A 1 26 ILE 26 48 48 ILE ILE A . n A 1 27 SER 27 49 49 SER SER A . n A 1 28 ARG 28 50 50 ARG ARG A . n A 1 29 THR 29 51 51 THR THR A . n A 1 30 GLU 30 52 52 GLU GLU A . n A 1 31 ALA 31 53 53 ALA ALA A . n A 1 32 ALA 32 54 54 ALA ALA A . n A 1 33 ASP 33 55 55 ASP ASP A . n A 1 34 LEU 34 56 56 LEU LEU A . n A 1 35 CYS 35 57 57 CYS CYS A . n A 1 36 GLN 36 58 58 GLN GLN A . n A 1 37 ALA 37 59 59 ALA ALA A . n A 1 38 PHE 38 60 60 PHE PHE A . n A 1 39 ASN 39 61 61 ASN ASN A . n A 1 40 SER 40 62 62 SER SER A . n A 1 41 THR 41 63 63 THR THR A . n A 1 42 LEU 42 64 64 LEU LEU A . n A 1 43 PRO 43 65 65 PRO PRO A . n A 1 44 THR 44 66 66 THR THR A . n A 1 45 MET 45 67 67 MET MET A . n A 1 46 ASP 46 68 68 ASP ASP A . n A 1 47 GLN 47 69 69 GLN GLN A . n A 1 48 MET 48 70 70 MET MET A . n A 1 49 LYS 49 71 71 LYS LYS A . n A 1 50 LEU 50 72 72 LEU LEU A . n A 1 51 ALA 51 73 73 ALA ALA A . n A 1 52 LEU 52 74 74 LEU LEU A . n A 1 53 SER 53 75 75 SER SER A . n A 1 54 LYS 54 76 76 LYS LYS A . n A 1 55 GLY 55 77 77 GLY GLY A . n A 1 56 PHE 56 78 78 PHE PHE A . n A 1 57 GLU 57 79 79 GLU GLU A . n A 1 58 THR 58 80 80 THR THR A . n A 1 59 CYS 59 81 81 CYS CYS A . n A 1 60 ARG 60 82 82 ARG ARG A . n A 1 61 TYR 61 83 83 TYR TYR A . n A 1 62 GLY 62 84 84 GLY GLY A . n A 1 63 PHE 63 85 85 PHE PHE A . n A 1 64 ILE 64 86 86 ILE ILE A . n A 1 65 GLU 65 87 87 GLU GLU A . n A 1 66 GLY 66 88 88 GLY GLY A . n A 1 67 ASN 67 89 89 ASN ASN A . n A 1 68 VAL 68 90 90 VAL VAL A . n A 1 69 VAL 69 91 91 VAL VAL A . n A 1 70 ILE 70 92 92 ILE ILE A . n A 1 71 PRO 71 93 93 PRO PRO A . n A 1 72 ARG 72 94 94 ARG ARG A . n A 1 73 ILE 73 95 95 ILE ILE A . n A 1 74 HIS 74 96 96 HIS HIS A . n A 1 75 PRO 75 97 97 PRO PRO A . n A 1 76 ASN 76 98 98 ASN ASN A . n A 1 77 ALA 77 99 99 ALA ALA A . n A 1 78 ILE 78 100 100 ILE ILE A . n A 1 79 CYS 79 101 101 CYS CYS A . n A 1 80 ALA 80 102 102 ALA ALA A . n A 1 81 ALA 81 103 103 ALA ALA A . n A 1 82 ASN 82 104 104 ASN ASN A . n A 1 83 HIS 83 105 105 HIS HIS A . n A 1 84 THR 84 106 106 THR THR A . n A 1 85 GLY 85 107 107 GLY GLY A . n A 1 86 VAL 86 108 108 VAL VAL A . n A 1 87 TYR 87 109 109 TYR TYR A . n A 1 88 ILE 88 110 110 ILE ILE A . n A 1 89 LEU 89 111 111 LEU LEU A . n A 1 90 VAL 90 112 112 VAL VAL A . n A 1 91 THR 91 113 113 THR THR A . n A 1 92 SER 92 114 114 SER SER A . n A 1 93 ASN 93 115 115 ASN ASN A . n A 1 94 THR 94 116 116 THR THR A . n A 1 95 SER 95 117 117 SER SER A . n A 1 96 HIS 96 118 118 HIS HIS A . n A 1 97 TYR 97 119 119 TYR TYR A . n A 1 98 ASP 98 120 120 ASP ASP A . n A 1 99 THR 99 121 121 THR THR A . n A 1 100 TYR 100 122 122 TYR TYR A . n A 1 101 CYS 101 123 123 CYS CYS A . n A 1 102 PHE 102 124 124 PHE PHE A . n A 1 103 ASN 103 125 125 ASN ASN A . n A 1 104 ALA 104 126 126 ALA ALA A . n A 1 105 SER 105 127 127 SER SER A . n A 1 106 ALA 106 128 128 ALA ALA A . n A 1 107 PRO 107 129 129 PRO PRO A . n A 1 108 PRO 108 130 130 PRO PRO A . n A 1 109 GLU 109 131 131 GLU GLU A . n A 1 110 GLU 110 132 132 GLU GLU A . n A 1 111 ASP 111 133 133 ASP ASP A . n A 1 112 CYS 112 134 134 CYS CYS A . n A 1 113 THR 113 135 135 THR THR A . n A 1 114 SER 114 136 136 SER SER A . n A 1 115 VAL 115 137 137 VAL VAL A . n A 1 116 THR 116 138 138 THR THR A . n A 1 117 ASP 117 139 139 ASP ASP A . n A 1 118 LEU 118 140 140 LEU LEU A . n A 1 119 PRO 119 141 141 PRO PRO A . n A 1 120 ASN 120 142 142 ASN ASN A . n A 1 121 SER 121 143 143 SER SER A . n A 1 122 PHE 122 144 144 PHE PHE A . n A 1 123 ASP 123 145 145 ASP ASP A . n A 1 124 GLY 124 146 146 GLY GLY A . n A 1 125 PRO 125 147 147 PRO PRO A . n A 1 126 VAL 126 148 148 VAL VAL A . n A 1 127 THR 127 149 149 THR THR A . n A 1 128 ILE 128 150 150 ILE ILE A . n A 1 129 THR 129 151 151 THR THR A . n A 1 130 ILE 130 152 152 ILE ILE A . n A 1 131 VAL 131 153 153 VAL VAL A . n A 1 132 ASN 132 154 154 ASN ASN A . n A 1 133 ARG 133 155 155 ARG ARG A . n A 1 134 ASP 134 156 156 ASP ASP A . n A 1 135 GLY 135 157 157 GLY GLY A . n A 1 136 THR 136 158 158 THR THR A . n A 1 137 ARG 137 159 159 ARG ARG A . n A 1 138 TYR 138 160 160 TYR TYR A . n A 1 139 SER 139 161 161 SER SER A . n A 1 140 LYS 140 162 162 LYS LYS A . n A 1 141 LYS 141 163 163 LYS LYS A . n A 1 142 GLY 142 164 164 GLY GLY A . n A 1 143 GLU 143 165 165 GLU GLU A . n A 1 144 TYR 144 166 166 TYR TYR A . n A 1 145 ARG 145 167 167 ARG ARG A . n A 1 146 THR 146 168 168 THR THR A . n A 1 147 HIS 147 169 169 HIS HIS A . n A 1 148 GLN 148 170 170 GLN GLN A . n A 1 149 GLU 149 171 171 GLU GLU A . n A 1 150 ASP 150 172 172 ASP ASP A . n A 1 151 ILE 151 173 173 ILE ILE A . n A 1 152 ASP 152 174 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id T6J _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id T6J _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T6J 1 201 201 T6J LIG A . C 3 DMS 1 202 1 DMS DMS A . D 3 DMS 1 203 2 DMS DMS A . E 3 DMS 1 204 3 DMS DMS A . F 4 EDO 1 205 2 EDO EDO A . G 5 HOH 1 301 278 HOH HOH A . G 5 HOH 2 302 71 HOH HOH A . G 5 HOH 3 303 161 HOH HOH A . G 5 HOH 4 304 103 HOH HOH A . G 5 HOH 5 305 163 HOH HOH A . G 5 HOH 6 306 55 HOH HOH A . G 5 HOH 7 307 175 HOH HOH A . G 5 HOH 8 308 60 HOH HOH A . G 5 HOH 9 309 180 HOH HOH A . G 5 HOH 10 310 125 HOH HOH A . G 5 HOH 11 311 21 HOH HOH A . G 5 HOH 12 312 192 HOH HOH A . G 5 HOH 13 313 50 HOH HOH A . G 5 HOH 14 314 49 HOH HOH A . G 5 HOH 15 315 215 HOH HOH A . G 5 HOH 16 316 85 HOH HOH A . G 5 HOH 17 317 114 HOH HOH A . G 5 HOH 18 318 120 HOH HOH A . G 5 HOH 19 319 13 HOH HOH A . G 5 HOH 20 320 76 HOH HOH A . G 5 HOH 21 321 137 HOH HOH A . G 5 HOH 22 322 91 HOH HOH A . G 5 HOH 23 323 10 HOH HOH A . G 5 HOH 24 324 66 HOH HOH A . G 5 HOH 25 325 44 HOH HOH A . G 5 HOH 26 326 255 HOH HOH A . G 5 HOH 27 327 297 HOH HOH A . G 5 HOH 28 328 107 HOH HOH A . G 5 HOH 29 329 101 HOH HOH A . G 5 HOH 30 330 110 HOH HOH A . G 5 HOH 31 331 144 HOH HOH A . G 5 HOH 32 332 4 HOH HOH A . G 5 HOH 33 333 205 HOH HOH A . G 5 HOH 34 334 185 HOH HOH A . G 5 HOH 35 335 81 HOH HOH A . G 5 HOH 36 336 147 HOH HOH A . G 5 HOH 37 337 109 HOH HOH A . G 5 HOH 38 338 51 HOH HOH A . G 5 HOH 39 339 218 HOH HOH A . G 5 HOH 40 340 102 HOH HOH A . G 5 HOH 41 341 56 HOH HOH A . G 5 HOH 42 342 2 HOH HOH A . G 5 HOH 43 343 46 HOH HOH A . G 5 HOH 44 344 1 HOH HOH A . G 5 HOH 45 345 127 HOH HOH A . G 5 HOH 46 346 34 HOH HOH A . G 5 HOH 47 347 18 HOH HOH A . G 5 HOH 48 348 79 HOH HOH A . G 5 HOH 49 349 31 HOH HOH A . G 5 HOH 50 350 271 HOH HOH A . G 5 HOH 51 351 232 HOH HOH A . G 5 HOH 52 352 7 HOH HOH A . G 5 HOH 53 353 54 HOH HOH A . G 5 HOH 54 354 35 HOH HOH A . G 5 HOH 55 355 57 HOH HOH A . G 5 HOH 56 356 100 HOH HOH A . G 5 HOH 57 357 82 HOH HOH A . G 5 HOH 58 358 27 HOH HOH A . G 5 HOH 59 359 41 HOH HOH A . G 5 HOH 60 360 254 HOH HOH A . G 5 HOH 61 361 14 HOH HOH A . G 5 HOH 62 362 238 HOH HOH A . G 5 HOH 63 363 28 HOH HOH A . G 5 HOH 64 364 78 HOH HOH A . G 5 HOH 65 365 212 HOH HOH A . G 5 HOH 66 366 146 HOH HOH A . G 5 HOH 67 367 15 HOH HOH A . G 5 HOH 68 368 29 HOH HOH A . G 5 HOH 69 369 178 HOH HOH A . G 5 HOH 70 370 293 HOH HOH A . G 5 HOH 71 371 33 HOH HOH A . G 5 HOH 72 372 3 HOH HOH A . G 5 HOH 73 373 38 HOH HOH A . G 5 HOH 74 374 26 HOH HOH A . G 5 HOH 75 375 5 HOH HOH A . G 5 HOH 76 376 158 HOH HOH A . G 5 HOH 77 377 63 HOH HOH A . G 5 HOH 78 378 11 HOH HOH A . G 5 HOH 79 379 45 HOH HOH A . G 5 HOH 80 380 32 HOH HOH A . G 5 HOH 81 381 226 HOH HOH A . G 5 HOH 82 382 16 HOH HOH A . G 5 HOH 83 383 196 HOH HOH A . G 5 HOH 84 384 252 HOH HOH A . G 5 HOH 85 385 9 HOH HOH A . G 5 HOH 86 386 75 HOH HOH A . G 5 HOH 87 387 22 HOH HOH A . G 5 HOH 88 388 116 HOH HOH A . G 5 HOH 89 389 68 HOH HOH A . G 5 HOH 90 390 39 HOH HOH A . G 5 HOH 91 391 48 HOH HOH A . G 5 HOH 92 392 295 HOH HOH A . G 5 HOH 93 393 72 HOH HOH A . G 5 HOH 94 394 112 HOH HOH A . G 5 HOH 95 395 155 HOH HOH A . G 5 HOH 96 396 160 HOH HOH A . G 5 HOH 97 397 154 HOH HOH A . G 5 HOH 98 398 36 HOH HOH A . G 5 HOH 99 399 228 HOH HOH A . G 5 HOH 100 400 42 HOH HOH A . G 5 HOH 101 401 95 HOH HOH A . G 5 HOH 102 402 298 HOH HOH A . G 5 HOH 103 403 43 HOH HOH A . G 5 HOH 104 404 182 HOH HOH A . G 5 HOH 105 405 290 HOH HOH A . G 5 HOH 106 406 128 HOH HOH A . G 5 HOH 107 407 291 HOH HOH A . G 5 HOH 108 408 47 HOH HOH A . G 5 HOH 109 409 189 HOH HOH A . G 5 HOH 110 410 261 HOH HOH A . G 5 HOH 111 411 25 HOH HOH A . G 5 HOH 112 412 250 HOH HOH A . G 5 HOH 113 413 73 HOH HOH A . G 5 HOH 114 414 292 HOH HOH A . G 5 HOH 115 415 159 HOH HOH A . G 5 HOH 116 416 139 HOH HOH A . G 5 HOH 117 417 67 HOH HOH A . G 5 HOH 118 418 210 HOH HOH A . G 5 HOH 119 419 177 HOH HOH A . G 5 HOH 120 420 223 HOH HOH A . G 5 HOH 121 421 121 HOH HOH A . G 5 HOH 122 422 156 HOH HOH A . G 5 HOH 123 423 20 HOH HOH A . G 5 HOH 124 424 227 HOH HOH A . G 5 HOH 125 425 86 HOH HOH A . G 5 HOH 126 426 153 HOH HOH A . G 5 HOH 127 427 239 HOH HOH A . G 5 HOH 128 428 294 HOH HOH A . G 5 HOH 129 429 24 HOH HOH A . G 5 HOH 130 430 106 HOH HOH A . G 5 HOH 131 431 157 HOH HOH A . G 5 HOH 132 432 197 HOH HOH A . G 5 HOH 133 433 6 HOH HOH A . G 5 HOH 134 434 87 HOH HOH A . G 5 HOH 135 435 98 HOH HOH A . G 5 HOH 136 436 40 HOH HOH A . G 5 HOH 137 437 92 HOH HOH A . G 5 HOH 138 438 167 HOH HOH A . G 5 HOH 139 439 123 HOH HOH A . G 5 HOH 140 440 221 HOH HOH A . G 5 HOH 141 441 64 HOH HOH A . G 5 HOH 142 442 174 HOH HOH A . G 5 HOH 143 443 179 HOH HOH A . G 5 HOH 144 444 272 HOH HOH A . G 5 HOH 145 445 23 HOH HOH A . G 5 HOH 146 446 12 HOH HOH A . G 5 HOH 147 447 256 HOH HOH A . G 5 HOH 148 448 259 HOH HOH A . G 5 HOH 149 449 152 HOH HOH A . G 5 HOH 150 450 94 HOH HOH A . G 5 HOH 151 451 122 HOH HOH A . G 5 HOH 152 452 270 HOH HOH A . G 5 HOH 153 453 264 HOH HOH A . G 5 HOH 154 454 17 HOH HOH A . G 5 HOH 155 455 130 HOH HOH A . G 5 HOH 156 456 96 HOH HOH A . G 5 HOH 157 457 105 HOH HOH A . G 5 HOH 158 458 70 HOH HOH A . G 5 HOH 159 459 124 HOH HOH A . G 5 HOH 160 460 258 HOH HOH A . G 5 HOH 161 461 8 HOH HOH A . G 5 HOH 162 462 201 HOH HOH A . G 5 HOH 163 463 281 HOH HOH A . G 5 HOH 164 464 80 HOH HOH A . G 5 HOH 165 465 58 HOH HOH A . G 5 HOH 166 466 149 HOH HOH A . G 5 HOH 167 467 84 HOH HOH A . G 5 HOH 168 468 151 HOH HOH A . G 5 HOH 169 469 53 HOH HOH A . G 5 HOH 170 470 119 HOH HOH A . G 5 HOH 171 471 237 HOH HOH A . G 5 HOH 172 472 283 HOH HOH A . G 5 HOH 173 473 77 HOH HOH A . G 5 HOH 174 474 183 HOH HOH A . G 5 HOH 175 475 222 HOH HOH A . G 5 HOH 176 476 225 HOH HOH A . G 5 HOH 177 477 131 HOH HOH A . G 5 HOH 178 478 280 HOH HOH A . G 5 HOH 179 479 219 HOH HOH A . G 5 HOH 180 480 111 HOH HOH A . G 5 HOH 181 481 165 HOH HOH A . G 5 HOH 182 482 52 HOH HOH A . G 5 HOH 183 483 193 HOH HOH A . G 5 HOH 184 484 134 HOH HOH A . G 5 HOH 185 485 207 HOH HOH A . G 5 HOH 186 486 200 HOH HOH A . G 5 HOH 187 487 249 HOH HOH A . G 5 HOH 188 488 136 HOH HOH A . G 5 HOH 189 489 204 HOH HOH A . G 5 HOH 190 490 235 HOH HOH A . G 5 HOH 191 491 140 HOH HOH A . G 5 HOH 192 492 248 HOH HOH A . G 5 HOH 193 493 236 HOH HOH A . G 5 HOH 194 494 69 HOH HOH A . G 5 HOH 195 495 188 HOH HOH A . G 5 HOH 196 496 173 HOH HOH A . G 5 HOH 197 497 89 HOH HOH A . G 5 HOH 198 498 166 HOH HOH A . G 5 HOH 199 499 243 HOH HOH A . G 5 HOH 200 500 267 HOH HOH A . G 5 HOH 201 501 113 HOH HOH A . G 5 HOH 202 502 170 HOH HOH A . G 5 HOH 203 503 97 HOH HOH A . G 5 HOH 204 504 83 HOH HOH A . G 5 HOH 205 505 135 HOH HOH A . G 5 HOH 206 506 194 HOH HOH A . G 5 HOH 207 507 191 HOH HOH A . G 5 HOH 208 508 61 HOH HOH A . G 5 HOH 209 509 104 HOH HOH A . G 5 HOH 210 510 168 HOH HOH A . G 5 HOH 211 511 37 HOH HOH A . G 5 HOH 212 512 138 HOH HOH A . G 5 HOH 213 513 184 HOH HOH A . G 5 HOH 214 514 172 HOH HOH A . G 5 HOH 215 515 88 HOH HOH A . G 5 HOH 216 516 118 HOH HOH A . G 5 HOH 217 517 202 HOH HOH A . G 5 HOH 218 518 275 HOH HOH A . G 5 HOH 219 519 241 HOH HOH A . G 5 HOH 220 520 251 HOH HOH A . G 5 HOH 221 521 59 HOH HOH A . G 5 HOH 222 522 181 HOH HOH A . G 5 HOH 223 523 132 HOH HOH A . G 5 HOH 224 524 150 HOH HOH A . G 5 HOH 225 525 285 HOH HOH A . G 5 HOH 226 526 164 HOH HOH A . G 5 HOH 227 527 145 HOH HOH A . G 5 HOH 228 528 186 HOH HOH A . G 5 HOH 229 529 143 HOH HOH A . G 5 HOH 230 530 142 HOH HOH A . G 5 HOH 231 531 30 HOH HOH A . G 5 HOH 232 532 90 HOH HOH A . G 5 HOH 233 533 266 HOH HOH A . G 5 HOH 234 534 141 HOH HOH A . G 5 HOH 235 535 169 HOH HOH A . G 5 HOH 236 536 274 HOH HOH A . G 5 HOH 237 537 296 HOH HOH A . G 5 HOH 238 538 230 HOH HOH A . G 5 HOH 239 539 176 HOH HOH A . G 5 HOH 240 540 190 HOH HOH A . G 5 HOH 241 541 65 HOH HOH A . G 5 HOH 242 542 99 HOH HOH A . G 5 HOH 243 543 244 HOH HOH A . G 5 HOH 244 544 198 HOH HOH A . G 5 HOH 245 545 93 HOH HOH A . G 5 HOH 246 546 162 HOH HOH A . G 5 HOH 247 547 74 HOH HOH A . G 5 HOH 248 548 199 HOH HOH A . G 5 HOH 249 549 171 HOH HOH A . G 5 HOH 250 550 246 HOH HOH A . G 5 HOH 251 551 257 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 BUSTER '2.10.4 (20-APR-2021)' ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 2 Aimless . ? program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.23 'SEP. 23, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # _cell.entry_id 5SBL _cell.length_a 30.668 _cell.length_b 81.473 _cell.length_c 31.911 _cell.angle_alpha 90.000 _cell.angle_beta 117.750 _cell.angle_gamma 90.000 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SBL _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.crystals_number 1 _exptl.entry_id 5SBL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.84 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2021-03-06 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91199 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.91199 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5SBL _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 26.760 _reflns.d_resolution_high 1.198 _reflns.number_obs 31724 _reflns.number_all ? _reflns.percent_possible_obs 80.700 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.900 _reflns.B_iso_Wilson_estimate 7.750 _reflns.pdbx_redundancy 3.000 _reflns.pdbx_Rrim_I_all 0.068 _reflns.pdbx_Rpim_I_all 0.038 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 94426 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.198 1.295 ? 3052 ? ? ? ? ? ? 1.900 ? 2.000 ? 1586 ? ? ? ? 24.800 0.471 0.324 0.796 1 2 3.502 26.760 ? 5184 ? ? ? ? ? ? 3.300 ? 29.800 ? 1585 ? ? ? ? 89.500 0.040 0.022 0.998 # _refine.entry_id 5SBL _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.1980 _refine.ls_d_res_low 26.7600 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 73.0000 _refine.ls_number_reflns_obs 31724 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1673 _refine.ls_R_factor_R_work 0.1659 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1949 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9500 _refine.ls_number_reflns_R_free 1570 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 12.7300 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0209 _refine.aniso_B[2][2] -0.2233 _refine.aniso_B[3][3] 0.2024 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0146 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9520 _refine.overall_SU_R_Cruickshank_DPI 0.0540 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0570 _refine.pdbx_overall_SU_R_Blow_DPI 0.0590 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0610 _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 2JCP _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 150.860 _refine.B_iso_min 5.010 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_analyze.entry_id 5SBL _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.140 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.1980 _refine_hist.d_res_low 26.7600 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 260 _refine_hist.number_atoms_total 1457 _refine_hist.pdbx_number_residues_total 149 _refine_hist.pdbx_B_iso_mean_ligand 16.33 _refine_hist.pdbx_B_iso_mean_solvent 24.80 _refine_hist.pdbx_number_atoms_protein 1163 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' t_dihedral_angle_d 459 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes ? ? ? ? ? 'X-RAY DIFFRACTION' t_gen_planes 234 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 1269 ? ? 10.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 177 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 1759 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 1299 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 1778 1.160 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 5.720 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 15.410 ? ? ? # _refine_ls_shell.d_res_high 1.2000 _refine_ls_shell.d_res_low 1.2400 _refine_ls_shell.pdbx_total_number_of_bins_used 51 _refine_ls_shell.percent_reflns_obs 13.8900 _refine_ls_shell.number_reflns_R_work 609 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2366 _refine_ls_shell.R_factor_R_free 0.2332 _refine_ls_shell.percent_reflns_R_free 4.0900 _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 635 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5SBL _struct.title 'CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z126932614' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5SBL _struct_keywords.text 'SGC - Diamond I04-1 fragment screening, PanDDA, XChemExplorer, antigen, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CD44_MOUSE _struct_ref.pdbx_db_accession P15379 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAAN HTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDID ; _struct_ref.pdbx_align_begin 23 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5SBL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15379 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 172 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5SBL MET A 1 ? UNP P15379 ? ? 'initiating methionine' 23 1 1 5SBL ASN A 2 ? UNP P15379 ? ? 'expression tag' 24 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 27 ? PHE A 38 ? SER A 49 PHE A 60 1 ? 12 HELX_P HELX_P2 AA2 THR A 44 ? LYS A 54 ? THR A 66 LYS A 76 1 ? 11 HELX_P HELX_P3 AA3 CYS A 79 ? HIS A 83 ? CYS A 101 HIS A 105 5 ? 5 HELX_P HELX_P4 AA4 HIS A 147 ? ILE A 151 ? HIS A 169 ILE A 173 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 32 A CYS 134 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 57 A CYS 123 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf3 disulf ? ? A CYS 59 SG ? ? ? 1_555 A CYS 79 SG ? ? A CYS 81 A CYS 101 1_555 ? ? ? ? ? ? ? 2.021 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 10 ? CYS A 112 ? CYS A 32 ? 1_555 CYS A 134 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 35 ? CYS A 101 ? CYS A 57 ? 1_555 CYS A 123 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 59 ? CYS A 79 ? CYS A 81 ? 1_555 CYS A 101 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 85 ? ILE A 88 ? GLY A 107 ILE A 110 AA1 2 VAL A 68 ? ARG A 72 ? VAL A 90 ARG A 94 AA1 3 GLY A 62 ? PHE A 63 ? GLY A 84 PHE A 85 AA1 4 ASP A 98 ? PHE A 102 ? ASP A 120 PHE A 124 AA1 5 VAL A 15 ? LYS A 20 ? VAL A 37 LYS A 42 AA1 6 ILE A 4 ? VAL A 8 ? ILE A 26 VAL A 30 AA1 7 PHE A 122 ? ASN A 132 ? PHE A 144 ASN A 154 AA1 8 ARG A 137 ? GLU A 143 ? ARG A 159 GLU A 165 AA2 1 ARG A 11 ? TYR A 12 ? ARG A 33 TYR A 34 AA2 2 GLU A 110 ? ASP A 111 ? GLU A 132 ASP A 133 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 85 ? O GLY A 107 N ARG A 72 ? N ARG A 94 AA1 2 3 O VAL A 69 ? O VAL A 91 N GLY A 62 ? N GLY A 84 AA1 3 4 N PHE A 63 ? N PHE A 85 O TYR A 100 ? O TYR A 122 AA1 4 5 O THR A 99 ? O THR A 121 N VAL A 18 ? N VAL A 40 AA1 5 6 O GLU A 19 ? O GLU A 41 N ASN A 7 ? N ASN A 29 AA1 6 7 N ILE A 4 ? N ILE A 26 O THR A 129 ? O THR A 151 AA1 7 8 N ILE A 130 ? N ILE A 152 O TYR A 138 ? O TYR A 160 AA2 1 2 N ARG A 11 ? N ARG A 33 O ASP A 111 ? O ASP A 133 # _pdbx_entry_details.entry_id 5SBL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 431 ? ? O A HOH 478 ? ? 2.18 2 1 O A HOH 498 ? ? O A HOH 535 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 32 ? ? -47.43 154.59 2 1 SER A 47 ? ? -150.59 14.76 3 1 GLU A 131 ? ? -120.21 -134.30 # _phasing.method MR # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 550 ? . 5.85 2 1 O ? A HOH 551 ? 6.24 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 23 ? A MET 1 2 1 Y 1 A ASN 24 ? A ASN 2 3 1 Y 1 A ASP 174 ? A ASP 152 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DMS S S N N 88 DMS O O N N 89 DMS C1 C N N 90 DMS C2 C N N 91 DMS H11 H N N 92 DMS H12 H N N 93 DMS H13 H N N 94 DMS H21 H N N 95 DMS H22 H N N 96 DMS H23 H N N 97 EDO C1 C N N 98 EDO O1 O N N 99 EDO C2 C N N 100 EDO O2 O N N 101 EDO H11 H N N 102 EDO H12 H N N 103 EDO HO1 H N N 104 EDO H21 H N N 105 EDO H22 H N N 106 EDO HO2 H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HIS N N N N 157 HIS CA C N S 158 HIS C C N N 159 HIS O O N N 160 HIS CB C N N 161 HIS CG C Y N 162 HIS ND1 N Y N 163 HIS CD2 C Y N 164 HIS CE1 C Y N 165 HIS NE2 N Y N 166 HIS OXT O N N 167 HIS H H N N 168 HIS H2 H N N 169 HIS HA H N N 170 HIS HB2 H N N 171 HIS HB3 H N N 172 HIS HD1 H N N 173 HIS HD2 H N N 174 HIS HE1 H N N 175 HIS HE2 H N N 176 HIS HXT H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 T6J N1 N Y N 324 T6J C4 C Y N 325 T6J C5 C Y N 326 T6J C6 C Y N 327 T6J C7 C Y N 328 T6J C8 C Y N 329 T6J N N Y N 330 T6J C C N N 331 T6J O O N N 332 T6J C1 C N N 333 T6J C2 C Y N 334 T6J C3 C Y N 335 T6J O1 O N N 336 T6J S S N N 337 T6J H9 H N N 338 T6J H5 H N N 339 T6J H6 H N N 340 T6J H7 H N N 341 T6J H8 H N N 342 T6J H1 H N N 343 T6J H H N N 344 T6J H2 H N N 345 T6J H4 H N N 346 T6J H3 H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 EDO C1 O1 sing N N 92 EDO C1 C2 sing N N 93 EDO C1 H11 sing N N 94 EDO C1 H12 sing N N 95 EDO O1 HO1 sing N N 96 EDO C2 O2 sing N N 97 EDO C2 H21 sing N N 98 EDO C2 H22 sing N N 99 EDO O2 HO2 sing N N 100 GLN N CA sing N N 101 GLN N H sing N N 102 GLN N H2 sing N N 103 GLN CA C sing N N 104 GLN CA CB sing N N 105 GLN CA HA sing N N 106 GLN C O doub N N 107 GLN C OXT sing N N 108 GLN CB CG sing N N 109 GLN CB HB2 sing N N 110 GLN CB HB3 sing N N 111 GLN CG CD sing N N 112 GLN CG HG2 sing N N 113 GLN CG HG3 sing N N 114 GLN CD OE1 doub N N 115 GLN CD NE2 sing N N 116 GLN NE2 HE21 sing N N 117 GLN NE2 HE22 sing N N 118 GLN OXT HXT sing N N 119 GLU N CA sing N N 120 GLU N H sing N N 121 GLU N H2 sing N N 122 GLU CA C sing N N 123 GLU CA CB sing N N 124 GLU CA HA sing N N 125 GLU C O doub N N 126 GLU C OXT sing N N 127 GLU CB CG sing N N 128 GLU CB HB2 sing N N 129 GLU CB HB3 sing N N 130 GLU CG CD sing N N 131 GLU CG HG2 sing N N 132 GLU CG HG3 sing N N 133 GLU CD OE1 doub N N 134 GLU CD OE2 sing N N 135 GLU OE2 HE2 sing N N 136 GLU OXT HXT sing N N 137 GLY N CA sing N N 138 GLY N H sing N N 139 GLY N H2 sing N N 140 GLY CA C sing N N 141 GLY CA HA2 sing N N 142 GLY CA HA3 sing N N 143 GLY C O doub N N 144 GLY C OXT sing N N 145 GLY OXT HXT sing N N 146 HIS N CA sing N N 147 HIS N H sing N N 148 HIS N H2 sing N N 149 HIS CA C sing N N 150 HIS CA CB sing N N 151 HIS CA HA sing N N 152 HIS C O doub N N 153 HIS C OXT sing N N 154 HIS CB CG sing N N 155 HIS CB HB2 sing N N 156 HIS CB HB3 sing N N 157 HIS CG ND1 sing Y N 158 HIS CG CD2 doub Y N 159 HIS ND1 CE1 doub Y N 160 HIS ND1 HD1 sing N N 161 HIS CD2 NE2 sing Y N 162 HIS CD2 HD2 sing N N 163 HIS CE1 NE2 sing Y N 164 HIS CE1 HE1 sing N N 165 HIS NE2 HE2 sing N N 166 HIS OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 PHE N CA sing N N 255 PHE N H sing N N 256 PHE N H2 sing N N 257 PHE CA C sing N N 258 PHE CA CB sing N N 259 PHE CA HA sing N N 260 PHE C O doub N N 261 PHE C OXT sing N N 262 PHE CB CG sing N N 263 PHE CB HB2 sing N N 264 PHE CB HB3 sing N N 265 PHE CG CD1 doub Y N 266 PHE CG CD2 sing Y N 267 PHE CD1 CE1 sing Y N 268 PHE CD1 HD1 sing N N 269 PHE CD2 CE2 doub Y N 270 PHE CD2 HD2 sing N N 271 PHE CE1 CZ doub Y N 272 PHE CE1 HE1 sing N N 273 PHE CE2 CZ sing Y N 274 PHE CE2 HE2 sing N N 275 PHE CZ HZ sing N N 276 PHE OXT HXT sing N N 277 PRO N CA sing N N 278 PRO N CD sing N N 279 PRO N H sing N N 280 PRO CA C sing N N 281 PRO CA CB sing N N 282 PRO CA HA sing N N 283 PRO C O doub N N 284 PRO C OXT sing N N 285 PRO CB CG sing N N 286 PRO CB HB2 sing N N 287 PRO CB HB3 sing N N 288 PRO CG CD sing N N 289 PRO CG HG2 sing N N 290 PRO CG HG3 sing N N 291 PRO CD HD2 sing N N 292 PRO CD HD3 sing N N 293 PRO OXT HXT sing N N 294 SER N CA sing N N 295 SER N H sing N N 296 SER N H2 sing N N 297 SER CA C sing N N 298 SER CA CB sing N N 299 SER CA HA sing N N 300 SER C O doub N N 301 SER C OXT sing N N 302 SER CB OG sing N N 303 SER CB HB2 sing N N 304 SER CB HB3 sing N N 305 SER OG HG sing N N 306 SER OXT HXT sing N N 307 T6J C S sing N N 308 T6J O S doub N N 309 T6J S O1 doub N N 310 T6J C1 S sing N N 311 T6J C2 C1 sing N N 312 T6J C2 N doub Y N 313 T6J N C3 sing Y N 314 T6J C3 C4 sing Y N 315 T6J C4 C5 doub Y N 316 T6J C5 C6 sing Y N 317 T6J C6 C7 doub Y N 318 T6J C7 C8 sing Y N 319 T6J C3 C8 doub Y N 320 T6J C8 N1 sing Y N 321 T6J N1 C2 sing Y N 322 T6J N1 H9 sing N N 323 T6J C4 H5 sing N N 324 T6J C5 H6 sing N N 325 T6J C6 H7 sing N N 326 T6J C7 H8 sing N N 327 T6J C H1 sing N N 328 T6J C H sing N N 329 T6J C H2 sing N N 330 T6J C1 H4 sing N N 331 T6J C1 H3 sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # _pdbx_audit_support.ordinal 1 _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute on Aging (NIH/NIA)' _pdbx_audit_support.grant_number 1RF1AG057443 _pdbx_audit_support.country 'United States' # _pdbx_deposit_group.group_id G_1002221 _pdbx_deposit_group.group_description None _pdbx_deposit_group.group_title 'CD44 PanDDA analysis group deposition' _pdbx_deposit_group.group_type 'changed state' # _atom_sites.entry_id 5SBL _atom_sites.fract_transf_matrix[1][1] 0.032607 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.017156 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012274 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.035410 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_