HEADER STRUCTURAL PROTEIN 03-AUG-16 5SUH TITLE THE STRUCTURE OF DOUBLE RINGED TRIMERIC SHELL PROTEIN MSM0271 FROM THE TITLE 2 RMM MICROCOMPARTMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MSM0271 PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 GENE: MSMEG_0271, MSMEI_0264; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS BACTERIAL MICROCOMPARTMENT, SHELL, BMC-FP, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.MALLETTE,M.S.KIMBER REVDAT 4 06-MAR-24 5SUH 1 REMARK REVDAT 3 08-FEB-17 5SUH 1 JRNL REVDAT 2 01-FEB-17 5SUH 1 JRNL REVDAT 1 14-DEC-16 5SUH 0 JRNL AUTH E.MALLETTE,M.S.KIMBER JRNL TITL A COMPLETE STRUCTURAL INVENTORY OF THE MYCOBACTERIAL JRNL TITL 2 MICROCOMPARTMENT SHELL PROTEINS CONSTRAINS MODELS OF GLOBAL JRNL TITL 3 ARCHITECTURE AND TRANSPORT. JRNL REF J. BIOL. CHEM. V. 292 1197 2017 JRNL REFN ESSN 1083-351X JRNL PMID 27927988 JRNL DOI 10.1074/JBC.M116.754093 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1460 - 5.6135 0.99 2773 145 0.1732 0.2061 REMARK 3 2 5.6135 - 4.4567 1.00 2614 138 0.1374 0.1589 REMARK 3 3 4.4567 - 3.8936 1.00 2589 136 0.1509 0.2303 REMARK 3 4 3.8936 - 3.5378 1.00 2557 135 0.1703 0.2444 REMARK 3 5 3.5378 - 3.2843 1.00 2553 134 0.1906 0.2753 REMARK 3 6 3.2843 - 3.0907 1.00 2536 134 0.2087 0.2334 REMARK 3 7 3.0907 - 2.9359 1.00 2514 132 0.2135 0.3001 REMARK 3 8 2.9359 - 2.8081 1.00 2516 132 0.2357 0.2994 REMARK 3 9 2.8081 - 2.7000 1.00 2514 133 0.2492 0.3385 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4756 REMARK 3 ANGLE : 1.278 6471 REMARK 3 CHIRALITY : 0.055 770 REMARK 3 PLANARITY : 0.007 854 REMARK 3 DIHEDRAL : 14.995 1753 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): -26.2158 -62.2425 -13.0682 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.5287 REMARK 3 T33: 0.3860 T12: 0.1047 REMARK 3 T13: 0.0508 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 2.2121 L22: 1.5195 REMARK 3 L33: 0.7806 L12: -0.6041 REMARK 3 L13: 1.0757 L23: -0.5861 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: 0.1351 S13: 0.1617 REMARK 3 S21: -0.2634 S22: -0.1707 S23: -0.0615 REMARK 3 S31: -0.0085 S32: -0.1130 S33: 0.0440 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 0.6622 -43.8532 -4.5234 REMARK 3 T TENSOR REMARK 3 T11: 0.5020 T22: 0.5950 REMARK 3 T33: 0.7477 T12: -0.0075 REMARK 3 T13: 0.0251 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 1.5891 L22: 1.8892 REMARK 3 L33: 0.9488 L12: 0.0318 REMARK 3 L13: 0.1552 L23: -0.2974 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: 0.1022 S13: 0.6417 REMARK 3 S21: 0.1549 S22: 0.0505 S23: -0.1341 REMARK 3 S31: -0.2744 S32: 0.2031 S33: -0.0356 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): -24.2874 -29.8807 -22.2467 REMARK 3 T TENSOR REMARK 3 T11: 0.7790 T22: 0.7101 REMARK 3 T33: 0.7688 T12: 0.0588 REMARK 3 T13: 0.1390 T23: 0.2136 REMARK 3 L TENSOR REMARK 3 L11: 2.0546 L22: 1.6511 REMARK 3 L33: 0.6703 L12: 0.1228 REMARK 3 L13: 0.7275 L23: -0.0463 REMARK 3 S TENSOR REMARK 3 S11: 0.1550 S12: 0.5095 S13: 0.8400 REMARK 3 S21: -0.1773 S22: -0.1550 S23: -0.2136 REMARK 3 S31: -0.3037 S32: 0.0852 S33: 0.0351 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5SUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223141. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13300 REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: MSM0275 REMARK 200 REMARK 200 REMARK: HEXAGONAL PRISMS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN, 0.8 M NA/K TARTRATE, REMARK 280 0.1 M TRIS, 0.5% (W/V) PEG 2000MME, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 75.06000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.06000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 75.06000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 75.06000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 75.06000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 75.06000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 THR A 6 REMARK 465 GLU A 7 REMARK 465 ARG A 8 REMARK 465 ILE A 9 REMARK 465 GLY A 31 REMARK 465 THR A 32 REMARK 465 PRO A 33 REMARK 465 THR A 34 REMARK 465 ARG A 35 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ALA B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 THR B 6 REMARK 465 GLU B 7 REMARK 465 ARG B 8 REMARK 465 ILE B 9 REMARK 465 TYR B 29 REMARK 465 LEU B 30 REMARK 465 GLY B 31 REMARK 465 THR B 32 REMARK 465 PRO B 33 REMARK 465 THR B 34 REMARK 465 ARG B 35 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 ALA C 3 REMARK 465 PRO C 4 REMARK 465 GLU C 5 REMARK 465 THR C 6 REMARK 465 GLU C 7 REMARK 465 ARG C 8 REMARK 465 ILE C 9 REMARK 465 GLY C 31 REMARK 465 THR C 32 REMARK 465 PRO C 33 REMARK 465 THR C 34 REMARK 465 ARG C 35 REMARK 465 ALA C 36 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 29 OD1 ASP A 180 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 80.84 54.88 REMARK 500 ALA A 142 -120.05 -98.14 REMARK 500 ASP B 21 81.49 56.60 REMARK 500 ALA B 27 1.41 -59.78 REMARK 500 PHE B 121 145.71 -170.39 REMARK 500 ASP B 127 70.08 50.44 REMARK 500 GLN B 141 -156.90 -150.63 REMARK 500 ALA B 142 -124.54 56.13 REMARK 500 ASP C 21 79.61 59.00 REMARK 500 PHE C 121 144.01 -170.23 REMARK 500 ARG C 140 -157.52 -123.02 REMARK 500 GLN C 141 -70.72 -150.66 REMARK 500 ALA C 142 -116.94 -106.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 139 ARG B 140 145.25 REMARK 500 ARG C 140 GLN C 141 -138.48 REMARK 500 GLU C 217 HIS C 218 41.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5L37 RELATED DB: PDB REMARK 900 RELATED ID: 5L38 RELATED DB: PDB REMARK 900 RELATED ID: 5L39 RELATED DB: PDB DBREF 5SUH A 1 218 UNP A0QP48 A0QP48_MYCS2 1 218 DBREF 5SUH B 1 218 UNP A0QP48 A0QP48_MYCS2 1 218 DBREF 5SUH C 1 218 UNP A0QP48 A0QP48_MYCS2 1 218 SEQADV 5SUH MET A -19 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY A -18 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER A -17 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER A -16 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -15 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -14 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -13 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -12 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -11 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A -10 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER A -9 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER A -8 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY A -7 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH LEU A -6 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH VAL A -5 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH PRO A -4 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH ARG A -3 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY A -2 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER A -1 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS A 0 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH MET B -19 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY B -18 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER B -17 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER B -16 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -15 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -14 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -13 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -12 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -11 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B -10 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER B -9 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER B -8 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY B -7 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH LEU B -6 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH VAL B -5 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH PRO B -4 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH ARG B -3 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY B -2 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER B -1 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS B 0 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH MET C -19 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY C -18 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER C -17 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER C -16 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -15 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -14 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -13 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -12 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -11 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C -10 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER C -9 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER C -8 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY C -7 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH LEU C -6 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH VAL C -5 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH PRO C -4 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH ARG C -3 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH GLY C -2 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH SER C -1 UNP A0QP48 EXPRESSION TAG SEQADV 5SUH HIS C 0 UNP A0QP48 EXPRESSION TAG SEQRES 1 A 238 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 238 LEU VAL PRO ARG GLY SER HIS MET VAL ALA PRO GLU THR SEQRES 3 A 238 GLU ARG ILE ARG THR GLN ILE ARG VAL TYR LEU LEU VAL SEQRES 4 A 238 GLU ASP LEU GLN ARG GLN PHE ALA ALA TYR LEU GLY THR SEQRES 5 A 238 PRO THR ARG ALA ARG GLY TYR PRO PRO TYR GLU GLY GLU SEQRES 6 A 238 HIS ALA LEU ILE VAL GLU VAL SER PRO ALA LEU ALA ILE SEQRES 7 A 238 GLU ARG VAL ILE ASP LEU ALA LEU ARG ALA VAL PRO GLY SEQRES 8 A 238 VAL GLN PRO GLY ILE LEU TYR VAL GLU ARG GLN PHE GLY SEQRES 9 A 238 VAL LEU GLU ILE HIS SER ALA SER LEU ASP GLU VAL ARG SEQRES 10 A 238 ARG ALA GLY GLU ALA ILE LEU ALA GLY THR GLY ASN ARG SEQRES 11 A 238 ALA GLU ASP GLN LEU ARG PRO ARG VAL LEU PHE HIS ASP SEQRES 12 A 238 ILE ILE THR ASP ILE THR ASP GLN HIS ALA VAL ILE LEU SEQRES 13 A 238 ASN ARG ASN ARG GLN ALA SER MET ILE LEU PRO GLY GLN SEQRES 14 A 238 SER LEU LEU VAL TYR GLU MET THR PRO ALA LEU PHE ALA SEQRES 15 A 238 ALA VAL ALA ALA ASN GLU ALA GLU ARG VAL ALA PRO GLY SEQRES 16 A 238 LEU THR VAL VAL ASP VAL GLN MET ILE GLY ALA ALA GLY SEQRES 17 A 238 ARG LEU TYR ILE GLY GLY SER THR ASP GLU VAL THR VAL SEQRES 18 A 238 ALA ARG ASP HIS ILE THR THR VAL LEU SER ALA ILE GLU SEQRES 19 A 238 GLY GLN GLU HIS SEQRES 1 B 238 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 238 LEU VAL PRO ARG GLY SER HIS MET VAL ALA PRO GLU THR SEQRES 3 B 238 GLU ARG ILE ARG THR GLN ILE ARG VAL TYR LEU LEU VAL SEQRES 4 B 238 GLU ASP LEU GLN ARG GLN PHE ALA ALA TYR LEU GLY THR SEQRES 5 B 238 PRO THR ARG ALA ARG GLY TYR PRO PRO TYR GLU GLY GLU SEQRES 6 B 238 HIS ALA LEU ILE VAL GLU VAL SER PRO ALA LEU ALA ILE SEQRES 7 B 238 GLU ARG VAL ILE ASP LEU ALA LEU ARG ALA VAL PRO GLY SEQRES 8 B 238 VAL GLN PRO GLY ILE LEU TYR VAL GLU ARG GLN PHE GLY SEQRES 9 B 238 VAL LEU GLU ILE HIS SER ALA SER LEU ASP GLU VAL ARG SEQRES 10 B 238 ARG ALA GLY GLU ALA ILE LEU ALA GLY THR GLY ASN ARG SEQRES 11 B 238 ALA GLU ASP GLN LEU ARG PRO ARG VAL LEU PHE HIS ASP SEQRES 12 B 238 ILE ILE THR ASP ILE THR ASP GLN HIS ALA VAL ILE LEU SEQRES 13 B 238 ASN ARG ASN ARG GLN ALA SER MET ILE LEU PRO GLY GLN SEQRES 14 B 238 SER LEU LEU VAL TYR GLU MET THR PRO ALA LEU PHE ALA SEQRES 15 B 238 ALA VAL ALA ALA ASN GLU ALA GLU ARG VAL ALA PRO GLY SEQRES 16 B 238 LEU THR VAL VAL ASP VAL GLN MET ILE GLY ALA ALA GLY SEQRES 17 B 238 ARG LEU TYR ILE GLY GLY SER THR ASP GLU VAL THR VAL SEQRES 18 B 238 ALA ARG ASP HIS ILE THR THR VAL LEU SER ALA ILE GLU SEQRES 19 B 238 GLY GLN GLU HIS SEQRES 1 C 238 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 238 LEU VAL PRO ARG GLY SER HIS MET VAL ALA PRO GLU THR SEQRES 3 C 238 GLU ARG ILE ARG THR GLN ILE ARG VAL TYR LEU LEU VAL SEQRES 4 C 238 GLU ASP LEU GLN ARG GLN PHE ALA ALA TYR LEU GLY THR SEQRES 5 C 238 PRO THR ARG ALA ARG GLY TYR PRO PRO TYR GLU GLY GLU SEQRES 6 C 238 HIS ALA LEU ILE VAL GLU VAL SER PRO ALA LEU ALA ILE SEQRES 7 C 238 GLU ARG VAL ILE ASP LEU ALA LEU ARG ALA VAL PRO GLY SEQRES 8 C 238 VAL GLN PRO GLY ILE LEU TYR VAL GLU ARG GLN PHE GLY SEQRES 9 C 238 VAL LEU GLU ILE HIS SER ALA SER LEU ASP GLU VAL ARG SEQRES 10 C 238 ARG ALA GLY GLU ALA ILE LEU ALA GLY THR GLY ASN ARG SEQRES 11 C 238 ALA GLU ASP GLN LEU ARG PRO ARG VAL LEU PHE HIS ASP SEQRES 12 C 238 ILE ILE THR ASP ILE THR ASP GLN HIS ALA VAL ILE LEU SEQRES 13 C 238 ASN ARG ASN ARG GLN ALA SER MET ILE LEU PRO GLY GLN SEQRES 14 C 238 SER LEU LEU VAL TYR GLU MET THR PRO ALA LEU PHE ALA SEQRES 15 C 238 ALA VAL ALA ALA ASN GLU ALA GLU ARG VAL ALA PRO GLY SEQRES 16 C 238 LEU THR VAL VAL ASP VAL GLN MET ILE GLY ALA ALA GLY SEQRES 17 C 238 ARG LEU TYR ILE GLY GLY SER THR ASP GLU VAL THR VAL SEQRES 18 C 238 ALA ARG ASP HIS ILE THR THR VAL LEU SER ALA ILE GLU SEQRES 19 C 238 GLY GLN GLU HIS FORMUL 4 HOH *26(H2 O) HELIX 1 AA1 GLN A 23 LEU A 30 1 8 HELIX 2 AA2 PRO A 54 LEU A 56 5 3 HELIX 3 AA3 ALA A 57 VAL A 69 1 13 HELIX 4 AA4 SER A 92 GLY A 108 1 17 HELIX 5 AA5 ARG A 110 GLN A 114 5 5 HELIX 6 AA6 THR A 129 ASN A 137 1 9 HELIX 7 AA7 PRO A 158 LEU A 160 5 3 HELIX 8 AA8 PHE A 161 ALA A 173 1 13 HELIX 9 AA9 SER A 195 ILE A 213 1 19 HELIX 10 AB1 PRO B 54 LEU B 56 5 3 HELIX 11 AB2 ALA B 57 VAL B 69 1 13 HELIX 12 AB3 SER B 92 GLY B 108 1 17 HELIX 13 AB4 ARG B 110 GLN B 114 5 5 HELIX 14 AB5 THR B 129 ASN B 139 1 11 HELIX 15 AB6 PRO B 158 LEU B 160 5 3 HELIX 16 AB7 PHE B 161 ALA B 173 1 13 HELIX 17 AB8 SER B 195 ALA B 212 1 18 HELIX 18 AB9 GLN C 23 LEU C 30 1 8 HELIX 19 AC1 PRO C 54 LEU C 56 5 3 HELIX 20 AC2 ALA C 57 VAL C 69 1 13 HELIX 21 AC3 SER C 92 GLY C 108 1 17 HELIX 22 AC4 ARG C 110 GLN C 114 5 5 HELIX 23 AC5 THR C 129 ARG C 138 1 10 HELIX 24 AC6 PRO C 158 LEU C 160 5 3 HELIX 25 AC7 PHE C 161 ALA C 173 1 13 HELIX 26 AC8 SER C 195 ALA C 212 1 18 SHEET 1 AA1 4 GLN A 12 VAL A 19 0 SHEET 2 AA1 4 HIS A 46 SER A 53 -1 O SER A 53 N GLN A 12 SHEET 3 AA1 4 GLY A 84 SER A 90 -1 O ILE A 88 N LEU A 48 SHEET 4 AA1 4 GLN A 73 VAL A 79 -1 N TYR A 78 O VAL A 85 SHEET 1 AA2 4 ARG A 118 ILE A 125 0 SHEET 2 AA2 4 SER A 150 THR A 157 -1 O GLU A 155 N PHE A 121 SHEET 3 AA2 4 GLY A 188 GLY A 194 -1 O ILE A 192 N LEU A 152 SHEET 4 AA2 4 THR A 177 GLN A 182 -1 N GLN A 182 O ARG A 189 SHEET 1 AA3 4 GLN B 12 VAL B 19 0 SHEET 2 AA3 4 HIS B 46 SER B 53 -1 O SER B 53 N GLN B 12 SHEET 3 AA3 4 GLY B 84 SER B 90 -1 O SER B 90 N HIS B 46 SHEET 4 AA3 4 GLN B 73 VAL B 79 -1 N GLY B 75 O GLU B 87 SHEET 1 AA4 4 ARG B 118 ILE B 125 0 SHEET 2 AA4 4 SER B 150 THR B 157 -1 O GLU B 155 N PHE B 121 SHEET 3 AA4 4 GLY B 188 GLY B 194 -1 O GLY B 188 N MET B 156 SHEET 4 AA4 4 THR B 177 GLN B 182 -1 N THR B 177 O GLY B 193 SHEET 1 AA5 4 GLN C 12 VAL C 19 0 SHEET 2 AA5 4 HIS C 46 SER C 53 -1 O SER C 53 N GLN C 12 SHEET 3 AA5 4 GLY C 84 SER C 90 -1 O ILE C 88 N LEU C 48 SHEET 4 AA5 4 GLN C 73 VAL C 79 -1 N GLY C 75 O GLU C 87 SHEET 1 AA6 4 ARG C 118 ILE C 125 0 SHEET 2 AA6 4 SER C 150 THR C 157 -1 O GLU C 155 N PHE C 121 SHEET 3 AA6 4 GLY C 188 GLY C 194 -1 O ILE C 192 N LEU C 152 SHEET 4 AA6 4 THR C 177 GLN C 182 -1 N THR C 177 O GLY C 193 CISPEP 1 SER A 53 PRO A 54 0 -2.12 CISPEP 2 THR A 157 PRO A 158 0 -1.19 CISPEP 3 SER B 53 PRO B 54 0 -2.51 CISPEP 4 THR B 157 PRO B 158 0 -0.65 CISPEP 5 SER C 53 PRO C 54 0 -1.69 CISPEP 6 THR C 157 PRO C 158 0 -2.41 CRYST1 139.890 139.890 150.120 90.00 90.00 120.00 P 63 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007148 0.004127 0.000000 0.00000 SCALE2 0.000000 0.008254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006661 0.00000