HEADER HYDROLASE/RNA 03-AUG-16 5SUP TITLE CRYSTAL STRUCTURE OF THE SUB2-YRA1 COMPLEX IN ASSOCIATION WITH RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT RNA HELICASE SUB2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 61-446; COMPND 5 SYNONYM: SUPPRESSOR OF BRR1 PROTEIN 2; COMPND 6 EC: 3.6.4.13; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RNA ANNEALING PROTEIN YRA1; COMPND 10 CHAIN: G, H, I; COMPND 11 FRAGMENT: RESIDUES 200-226; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'); COMPND 15 CHAIN: D, E, F; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: SUB2, YDL084W; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 559292; SOURCE 13 STRAIN: ATCC 204508 / S288C; SOURCE 14 GENE: YRA1, YDR381W, D9481.2, D9509.1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630 KEYWDS MRNA EXPORT, HYDROLASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.REN,P.SCHMIEGE,G.BLOBEL REVDAT 3 04-OCT-23 5SUP 1 REMARK REVDAT 2 17-FEB-21 5SUP 1 TITLE LINK REVDAT 1 18-JAN-17 5SUP 0 JRNL AUTH Y.REN,P.SCHMIEGE,G.BLOBEL JRNL TITL STRUCTURAL AND BIOCHEMICAL ANALYSES OF THE DEAD-BOX ATPASE JRNL TITL 2 SUB2 IN ASSOCIATION WITH THO OR YRA1. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 28059701 JRNL DOI 10.7554/ELIFE.20070 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 44413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6820 - 6.5470 1.00 2857 137 0.1761 0.1903 REMARK 3 2 6.5470 - 5.1984 1.00 2689 158 0.1969 0.2652 REMARK 3 3 5.1984 - 4.5418 1.00 2655 159 0.1659 0.1876 REMARK 3 4 4.5418 - 4.1267 1.00 2660 132 0.1752 0.2351 REMARK 3 5 4.1267 - 3.8311 1.00 2664 125 0.1999 0.2713 REMARK 3 6 3.8311 - 3.6053 1.00 2626 148 0.2163 0.2648 REMARK 3 7 3.6053 - 3.4248 1.00 2612 138 0.2331 0.2851 REMARK 3 8 3.4248 - 3.2757 1.00 2650 123 0.2484 0.2686 REMARK 3 9 3.2757 - 3.1496 1.00 2622 146 0.2781 0.3218 REMARK 3 10 3.1496 - 3.0410 1.00 2596 142 0.2819 0.3514 REMARK 3 11 3.0410 - 2.9459 1.00 2621 132 0.2775 0.3374 REMARK 3 12 2.9459 - 2.8617 1.00 2581 131 0.2811 0.3490 REMARK 3 13 2.8617 - 2.7864 1.00 2604 146 0.2827 0.3222 REMARK 3 14 2.7864 - 2.7184 1.00 2584 149 0.2951 0.3792 REMARK 3 15 2.7184 - 2.6566 1.00 2599 134 0.3101 0.4057 REMARK 3 16 2.6566 - 2.6001 1.00 2558 135 0.3362 0.4200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 10310 REMARK 3 ANGLE : 1.076 13971 REMARK 3 CHIRALITY : 0.060 1592 REMARK 3 PLANARITY : 0.006 1742 REMARK 3 DIHEDRAL : 18.172 6285 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5SUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44413 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1XTJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS (PH 5.5), 20% PEG3350, REMARK 280 0.2 M AMMONIUM ACETATE, EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.48967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 164.97933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 164.97933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 82.48967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, I, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 57 REMARK 465 ALA A 58 REMARK 465 MET A 59 REMARK 465 GLY A 60 REMARK 465 SER A 61 REMARK 465 ASN A 445 REMARK 465 ASN A 446 REMARK 465 GLY B 57 REMARK 465 ALA B 58 REMARK 465 MET B 59 REMARK 465 GLY B 60 REMARK 465 SER B 61 REMARK 465 ASN B 445 REMARK 465 ASN B 446 REMARK 465 GLY C 57 REMARK 465 ALA C 58 REMARK 465 MET C 59 REMARK 465 GLY C 60 REMARK 465 SER C 61 REMARK 465 THR C 62 REMARK 465 GLY C 63 REMARK 465 ASN C 445 REMARK 465 ASN C 446 REMARK 465 GLY G 195 REMARK 465 ALA G 196 REMARK 465 MET G 197 REMARK 465 GLY G 198 REMARK 465 SER G 199 REMARK 465 ASN G 200 REMARK 465 LYS G 201 REMARK 465 PRO G 202 REMARK 465 LYS G 203 REMARK 465 ARG G 204 REMARK 465 GLU G 205 REMARK 465 LYS G 206 REMARK 465 PRO G 207 REMARK 465 LYS G 225 REMARK 465 LYS G 226 REMARK 465 GLY H 195 REMARK 465 ALA H 196 REMARK 465 MET H 197 REMARK 465 GLY H 198 REMARK 465 SER H 199 REMARK 465 ASN H 200 REMARK 465 LYS H 201 REMARK 465 PRO H 202 REMARK 465 LYS H 203 REMARK 465 ARG H 204 REMARK 465 GLU H 205 REMARK 465 LYS H 206 REMARK 465 PRO H 207 REMARK 465 LYS H 225 REMARK 465 LYS H 226 REMARK 465 GLY I 195 REMARK 465 ALA I 196 REMARK 465 MET I 197 REMARK 465 GLY I 198 REMARK 465 SER I 199 REMARK 465 ASN I 200 REMARK 465 LYS I 201 REMARK 465 PRO I 202 REMARK 465 LYS I 203 REMARK 465 ARG I 204 REMARK 465 GLU I 205 REMARK 465 LYS I 206 REMARK 465 PRO I 207 REMARK 465 ALA I 208 REMARK 465 LYS I 209 REMARK 465 LYS I 225 REMARK 465 LYS I 226 REMARK 465 U D 7 REMARK 465 U D 8 REMARK 465 U D 9 REMARK 465 U D 10 REMARK 465 U D 11 REMARK 465 U D 12 REMARK 465 U D 13 REMARK 465 U D 14 REMARK 465 U D 15 REMARK 465 U E 7 REMARK 465 U E 8 REMARK 465 U E 9 REMARK 465 U E 10 REMARK 465 U E 11 REMARK 465 U E 12 REMARK 465 U E 13 REMARK 465 U E 14 REMARK 465 U E 15 REMARK 465 U F 7 REMARK 465 U F 8 REMARK 465 U F 9 REMARK 465 U F 10 REMARK 465 U F 11 REMARK 465 U F 12 REMARK 465 U F 13 REMARK 465 U F 14 REMARK 465 U F 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS I 210 OE1 GLU I 218 1.73 REMARK 500 O SER C 86 NE2 GLN C 89 1.79 REMARK 500 OG SER H 211 OD2 ASP H 214 2.12 REMARK 500 OD2 ASP A 439 OG SER A 441 2.15 REMARK 500 NH1 ARG C 259 OE2 GLU C 267 2.16 REMARK 500 NH1 ARG C 194 O2' U E 5 2.17 REMARK 500 OD1 ASP C 371 O3' ADP C 3000 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 386 CD GLU B 386 OE1 -0.083 REMARK 500 GLU B 386 CD GLU B 386 OE2 -0.078 REMARK 500 GLU C 201 CD GLU C 201 OE1 -0.096 REMARK 500 GLU H 213 CD GLU H 213 OE1 -0.086 REMARK 500 GLU H 213 CD GLU H 213 OE2 -0.094 REMARK 500 GLU I 213 CD GLU I 213 OE1 -0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 414 CB - CA - C ANGL. DEV. = -13.3 DEGREES REMARK 500 GLU A 417 CG - CD - OE2 ANGL. DEV. = 13.5 DEGREES REMARK 500 GLU A 424 CG - CD - OE1 ANGL. DEV. = 12.9 DEGREES REMARK 500 ASP A 427 CB - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 ASP A 427 N - CA - CB ANGL. DEV. = 10.9 DEGREES REMARK 500 ASP A 427 CB - CG - OD1 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP A 427 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ILE B 438 CG1 - CB - CG2 ANGL. DEV. = -15.7 DEGREES REMARK 500 LYS C 65 CB - CG - CD ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG C 259 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 GLU H 213 CB - CA - C ANGL. DEV. = -12.6 DEGREES REMARK 500 GLU I 213 CG - CD - OE1 ANGL. DEV. = -12.9 DEGREES REMARK 500 GLU I 213 CG - CD - OE2 ANGL. DEV. = 13.3 DEGREES REMARK 500 LEU I 215 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 240 59.82 -93.67 REMARK 500 SER A 247 147.78 -171.07 REMARK 500 GLU A 273 4.43 -68.20 REMARK 500 LYS A 275 51.12 -104.09 REMARK 500 HIS A 339 17.84 59.09 REMARK 500 ASP A 427 66.69 34.70 REMARK 500 TYR A 443 22.78 -142.38 REMARK 500 GLU B 83 -8.96 -143.08 REMARK 500 SER B 247 148.01 -171.13 REMARK 500 LYS B 275 30.37 -99.00 REMARK 500 TYR B 443 30.04 -141.92 REMARK 500 SER C 247 148.12 -170.71 REMARK 500 LYS C 275 30.63 -95.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLN C 95 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF A1001 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A1000 O2B REMARK 620 2 BEF A1001 F1 118.8 REMARK 620 3 BEF A1001 F2 106.8 111.3 REMARK 620 4 BEF A1001 F3 101.6 109.6 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A1000 O1B REMARK 620 2 HOH A1102 O 87.1 REMARK 620 3 HOH A1104 O 170.3 84.9 REMARK 620 4 HOH A1107 O 86.2 83.3 87.4 REMARK 620 5 HOH A1111 O 107.5 89.5 78.0 164.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF B2001 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B2000 O3B REMARK 620 2 BEF B2001 F1 96.9 REMARK 620 3 BEF B2001 F2 116.1 111.3 REMARK 620 4 BEF B2001 F3 114.3 110.0 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B2000 O2B REMARK 620 2 HOH B2101 O 94.0 REMARK 620 3 HOH B2103 O 171.5 78.4 REMARK 620 4 HOH B2106 O 86.9 90.2 89.4 REMARK 620 5 HOH B2108 O 99.4 92.4 84.8 173.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF C3001 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP C3000 O2B REMARK 620 2 BEF C3001 F1 94.3 REMARK 620 3 BEF C3001 F2 132.7 111.3 REMARK 620 4 BEF C3001 F3 98.8 110.1 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C3002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP C3000 O1B REMARK 620 2 HOH C3101 O 99.1 REMARK 620 3 HOH C3102 O 167.2 84.9 REMARK 620 4 HOH C3104 O 79.4 96.0 88.1 REMARK 620 5 HOH C3105 O 117.3 89.8 74.7 161.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 3002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5SUQ RELATED DB: PDB DBREF 5SUP A 61 446 UNP Q07478 SUB2_YEAST 61 446 DBREF 5SUP B 61 446 UNP Q07478 SUB2_YEAST 61 446 DBREF 5SUP C 61 446 UNP Q07478 SUB2_YEAST 61 446 DBREF 5SUP G 200 226 UNP Q12159 YRA1_YEAST 200 226 DBREF 5SUP H 200 226 UNP Q12159 YRA1_YEAST 200 226 DBREF 5SUP I 200 226 UNP Q12159 YRA1_YEAST 200 226 DBREF 5SUP D 1 15 PDB 5SUP 5SUP 1 15 DBREF 5SUP E 1 15 PDB 5SUP 5SUP 1 15 DBREF 5SUP F 1 15 PDB 5SUP 5SUP 1 15 SEQADV 5SUP GLY A 57 UNP Q07478 EXPRESSION TAG SEQADV 5SUP ALA A 58 UNP Q07478 EXPRESSION TAG SEQADV 5SUP MET A 59 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY A 60 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY B 57 UNP Q07478 EXPRESSION TAG SEQADV 5SUP ALA B 58 UNP Q07478 EXPRESSION TAG SEQADV 5SUP MET B 59 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY B 60 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY C 57 UNP Q07478 EXPRESSION TAG SEQADV 5SUP ALA C 58 UNP Q07478 EXPRESSION TAG SEQADV 5SUP MET C 59 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY C 60 UNP Q07478 EXPRESSION TAG SEQADV 5SUP GLY G 195 UNP Q12159 EXPRESSION TAG SEQADV 5SUP ALA G 196 UNP Q12159 EXPRESSION TAG SEQADV 5SUP MET G 197 UNP Q12159 EXPRESSION TAG SEQADV 5SUP GLY G 198 UNP Q12159 EXPRESSION TAG SEQADV 5SUP SER G 199 UNP Q12159 EXPRESSION TAG SEQADV 5SUP GLY H 195 UNP Q12159 EXPRESSION TAG SEQADV 5SUP ALA H 196 UNP Q12159 EXPRESSION TAG SEQADV 5SUP MET H 197 UNP Q12159 EXPRESSION TAG SEQADV 5SUP GLY H 198 UNP Q12159 EXPRESSION TAG SEQADV 5SUP SER H 199 UNP Q12159 EXPRESSION TAG SEQADV 5SUP GLY I 195 UNP Q12159 EXPRESSION TAG SEQADV 5SUP ALA I 196 UNP Q12159 EXPRESSION TAG SEQADV 5SUP MET I 197 UNP Q12159 EXPRESSION TAG SEQADV 5SUP GLY I 198 UNP Q12159 EXPRESSION TAG SEQADV 5SUP SER I 199 UNP Q12159 EXPRESSION TAG SEQRES 1 A 390 GLY ALA MET GLY SER THR GLY PHE LYS ASP PHE LEU LEU SEQRES 2 A 390 LYS PRO GLU LEU SER ARG ALA ILE ILE ASP CYS GLY PHE SEQRES 3 A 390 GLU HIS PRO SER GLU VAL GLN GLN HIS THR ILE PRO GLN SEQRES 4 A 390 SER ILE HIS GLY THR ASP VAL LEU CYS GLN ALA LYS SER SEQRES 5 A 390 GLY LEU GLY LYS THR ALA VAL PHE VAL LEU SER THR LEU SEQRES 6 A 390 GLN GLN LEU ASP PRO VAL PRO GLY GLU VAL ALA VAL VAL SEQRES 7 A 390 VAL ILE CYS ASN ALA ARG GLU LEU ALA TYR GLN ILE ARG SEQRES 8 A 390 ASN GLU TYR LEU ARG PHE SER LYS TYR MET PRO ASP VAL SEQRES 9 A 390 LYS THR ALA VAL PHE TYR GLY GLY THR PRO ILE SER LYS SEQRES 10 A 390 ASP ALA GLU LEU LEU LYS ASN LYS ASP THR ALA PRO HIS SEQRES 11 A 390 ILE VAL VAL ALA THR PRO GLY ARG LEU LYS ALA LEU VAL SEQRES 12 A 390 ARG GLU LYS TYR ILE ASP LEU SER HIS VAL LYS ASN PHE SEQRES 13 A 390 VAL ILE ASP GLU CYS ASP LYS VAL LEU GLU GLU LEU ASP SEQRES 14 A 390 MET ARG ARG ASP VAL GLN GLU ILE PHE ARG ALA THR PRO SEQRES 15 A 390 ARG ASP LYS GLN VAL MET MET PHE SER ALA THR LEU SER SEQRES 16 A 390 GLN GLU ILE ARG PRO ILE CYS ARG ARG PHE LEU GLN ASN SEQRES 17 A 390 PRO LEU GLU ILE PHE VAL ASP ASP GLU ALA LYS LEU THR SEQRES 18 A 390 LEU HIS GLY LEU GLN GLN TYR TYR ILE LYS LEU GLU GLU SEQRES 19 A 390 ARG GLU LYS ASN ARG LYS LEU ALA GLN LEU LEU ASP ASP SEQRES 20 A 390 LEU GLU PHE ASN GLN VAL ILE ILE PHE VAL LYS SER THR SEQRES 21 A 390 THR ARG ALA ASN GLU LEU THR LYS LEU LEU ASN ALA SER SEQRES 22 A 390 ASN PHE PRO ALA ILE THR VAL HIS GLY HIS MET LYS GLN SEQRES 23 A 390 GLU GLU ARG ILE ALA ARG TYR LYS ALA PHE LYS ASP PHE SEQRES 24 A 390 GLU LYS ARG ILE CYS VAL SER THR ASP VAL PHE GLY ARG SEQRES 25 A 390 GLY ILE ASP ILE GLU ARG ILE ASN LEU ALA ILE ASN TYR SEQRES 26 A 390 ASP LEU THR ASN GLU ALA ASP GLN TYR LEU HIS ARG VAL SEQRES 27 A 390 GLY ARG ALA GLY ARG PHE GLY THR LYS GLY LEU ALA ILE SEQRES 28 A 390 SER PHE VAL SER SER LYS GLU ASP GLU GLU VAL LEU ALA SEQRES 29 A 390 LYS ILE GLN GLU ARG PHE ASP VAL LYS ILE ALA GLU PHE SEQRES 30 A 390 PRO GLU GLU GLY ILE ASP PRO SER THR TYR LEU ASN ASN SEQRES 1 B 390 GLY ALA MET GLY SER THR GLY PHE LYS ASP PHE LEU LEU SEQRES 2 B 390 LYS PRO GLU LEU SER ARG ALA ILE ILE ASP CYS GLY PHE SEQRES 3 B 390 GLU HIS PRO SER GLU VAL GLN GLN HIS THR ILE PRO GLN SEQRES 4 B 390 SER ILE HIS GLY THR ASP VAL LEU CYS GLN ALA LYS SER SEQRES 5 B 390 GLY LEU GLY LYS THR ALA VAL PHE VAL LEU SER THR LEU SEQRES 6 B 390 GLN GLN LEU ASP PRO VAL PRO GLY GLU VAL ALA VAL VAL SEQRES 7 B 390 VAL ILE CYS ASN ALA ARG GLU LEU ALA TYR GLN ILE ARG SEQRES 8 B 390 ASN GLU TYR LEU ARG PHE SER LYS TYR MET PRO ASP VAL SEQRES 9 B 390 LYS THR ALA VAL PHE TYR GLY GLY THR PRO ILE SER LYS SEQRES 10 B 390 ASP ALA GLU LEU LEU LYS ASN LYS ASP THR ALA PRO HIS SEQRES 11 B 390 ILE VAL VAL ALA THR PRO GLY ARG LEU LYS ALA LEU VAL SEQRES 12 B 390 ARG GLU LYS TYR ILE ASP LEU SER HIS VAL LYS ASN PHE SEQRES 13 B 390 VAL ILE ASP GLU CYS ASP LYS VAL LEU GLU GLU LEU ASP SEQRES 14 B 390 MET ARG ARG ASP VAL GLN GLU ILE PHE ARG ALA THR PRO SEQRES 15 B 390 ARG ASP LYS GLN VAL MET MET PHE SER ALA THR LEU SER SEQRES 16 B 390 GLN GLU ILE ARG PRO ILE CYS ARG ARG PHE LEU GLN ASN SEQRES 17 B 390 PRO LEU GLU ILE PHE VAL ASP ASP GLU ALA LYS LEU THR SEQRES 18 B 390 LEU HIS GLY LEU GLN GLN TYR TYR ILE LYS LEU GLU GLU SEQRES 19 B 390 ARG GLU LYS ASN ARG LYS LEU ALA GLN LEU LEU ASP ASP SEQRES 20 B 390 LEU GLU PHE ASN GLN VAL ILE ILE PHE VAL LYS SER THR SEQRES 21 B 390 THR ARG ALA ASN GLU LEU THR LYS LEU LEU ASN ALA SER SEQRES 22 B 390 ASN PHE PRO ALA ILE THR VAL HIS GLY HIS MET LYS GLN SEQRES 23 B 390 GLU GLU ARG ILE ALA ARG TYR LYS ALA PHE LYS ASP PHE SEQRES 24 B 390 GLU LYS ARG ILE CYS VAL SER THR ASP VAL PHE GLY ARG SEQRES 25 B 390 GLY ILE ASP ILE GLU ARG ILE ASN LEU ALA ILE ASN TYR SEQRES 26 B 390 ASP LEU THR ASN GLU ALA ASP GLN TYR LEU HIS ARG VAL SEQRES 27 B 390 GLY ARG ALA GLY ARG PHE GLY THR LYS GLY LEU ALA ILE SEQRES 28 B 390 SER PHE VAL SER SER LYS GLU ASP GLU GLU VAL LEU ALA SEQRES 29 B 390 LYS ILE GLN GLU ARG PHE ASP VAL LYS ILE ALA GLU PHE SEQRES 30 B 390 PRO GLU GLU GLY ILE ASP PRO SER THR TYR LEU ASN ASN SEQRES 1 C 390 GLY ALA MET GLY SER THR GLY PHE LYS ASP PHE LEU LEU SEQRES 2 C 390 LYS PRO GLU LEU SER ARG ALA ILE ILE ASP CYS GLY PHE SEQRES 3 C 390 GLU HIS PRO SER GLU VAL GLN GLN HIS THR ILE PRO GLN SEQRES 4 C 390 SER ILE HIS GLY THR ASP VAL LEU CYS GLN ALA LYS SER SEQRES 5 C 390 GLY LEU GLY LYS THR ALA VAL PHE VAL LEU SER THR LEU SEQRES 6 C 390 GLN GLN LEU ASP PRO VAL PRO GLY GLU VAL ALA VAL VAL SEQRES 7 C 390 VAL ILE CYS ASN ALA ARG GLU LEU ALA TYR GLN ILE ARG SEQRES 8 C 390 ASN GLU TYR LEU ARG PHE SER LYS TYR MET PRO ASP VAL SEQRES 9 C 390 LYS THR ALA VAL PHE TYR GLY GLY THR PRO ILE SER LYS SEQRES 10 C 390 ASP ALA GLU LEU LEU LYS ASN LYS ASP THR ALA PRO HIS SEQRES 11 C 390 ILE VAL VAL ALA THR PRO GLY ARG LEU LYS ALA LEU VAL SEQRES 12 C 390 ARG GLU LYS TYR ILE ASP LEU SER HIS VAL LYS ASN PHE SEQRES 13 C 390 VAL ILE ASP GLU CYS ASP LYS VAL LEU GLU GLU LEU ASP SEQRES 14 C 390 MET ARG ARG ASP VAL GLN GLU ILE PHE ARG ALA THR PRO SEQRES 15 C 390 ARG ASP LYS GLN VAL MET MET PHE SER ALA THR LEU SER SEQRES 16 C 390 GLN GLU ILE ARG PRO ILE CYS ARG ARG PHE LEU GLN ASN SEQRES 17 C 390 PRO LEU GLU ILE PHE VAL ASP ASP GLU ALA LYS LEU THR SEQRES 18 C 390 LEU HIS GLY LEU GLN GLN TYR TYR ILE LYS LEU GLU GLU SEQRES 19 C 390 ARG GLU LYS ASN ARG LYS LEU ALA GLN LEU LEU ASP ASP SEQRES 20 C 390 LEU GLU PHE ASN GLN VAL ILE ILE PHE VAL LYS SER THR SEQRES 21 C 390 THR ARG ALA ASN GLU LEU THR LYS LEU LEU ASN ALA SER SEQRES 22 C 390 ASN PHE PRO ALA ILE THR VAL HIS GLY HIS MET LYS GLN SEQRES 23 C 390 GLU GLU ARG ILE ALA ARG TYR LYS ALA PHE LYS ASP PHE SEQRES 24 C 390 GLU LYS ARG ILE CYS VAL SER THR ASP VAL PHE GLY ARG SEQRES 25 C 390 GLY ILE ASP ILE GLU ARG ILE ASN LEU ALA ILE ASN TYR SEQRES 26 C 390 ASP LEU THR ASN GLU ALA ASP GLN TYR LEU HIS ARG VAL SEQRES 27 C 390 GLY ARG ALA GLY ARG PHE GLY THR LYS GLY LEU ALA ILE SEQRES 28 C 390 SER PHE VAL SER SER LYS GLU ASP GLU GLU VAL LEU ALA SEQRES 29 C 390 LYS ILE GLN GLU ARG PHE ASP VAL LYS ILE ALA GLU PHE SEQRES 30 C 390 PRO GLU GLU GLY ILE ASP PRO SER THR TYR LEU ASN ASN SEQRES 1 G 32 GLY ALA MET GLY SER ASN LYS PRO LYS ARG GLU LYS PRO SEQRES 2 G 32 ALA LYS LYS SER LEU GLU ASP LEU ASP LYS GLU MET ALA SEQRES 3 G 32 ASP TYR PHE GLU LYS LYS SEQRES 1 H 32 GLY ALA MET GLY SER ASN LYS PRO LYS ARG GLU LYS PRO SEQRES 2 H 32 ALA LYS LYS SER LEU GLU ASP LEU ASP LYS GLU MET ALA SEQRES 3 H 32 ASP TYR PHE GLU LYS LYS SEQRES 1 I 32 GLY ALA MET GLY SER ASN LYS PRO LYS ARG GLU LYS PRO SEQRES 2 I 32 ALA LYS LYS SER LEU GLU ASP LEU ASP LYS GLU MET ALA SEQRES 3 I 32 ASP TYR PHE GLU LYS LYS SEQRES 1 D 15 U U U U U U U U U U U U U SEQRES 2 D 15 U U SEQRES 1 E 15 U U U U U U U U U U U U U SEQRES 2 E 15 U U SEQRES 1 F 15 U U U U U U U U U U U U U SEQRES 2 F 15 U U HET ADP A1000 27 HET BEF A1001 4 HET MG A1002 1 HET ADP B2000 27 HET BEF B2001 4 HET MG B2002 1 HET ADP C3000 27 HET BEF C3001 4 HET MG C3002 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM MG MAGNESIUM ION FORMUL 10 ADP 3(C10 H15 N5 O10 P2) FORMUL 11 BEF 3(BE F3 1-) FORMUL 12 MG 3(MG 2+) FORMUL 19 HOH *27(H2 O) HELIX 1 AA1 THR A 62 LEU A 68 5 7 HELIX 2 AA2 LYS A 70 CYS A 80 1 11 HELIX 3 AA3 SER A 86 ILE A 97 1 12 HELIX 4 AA4 LYS A 112 LEU A 124 1 13 HELIX 5 AA5 ALA A 139 SER A 154 1 16 HELIX 6 AA6 PRO A 170 ASN A 180 1 11 HELIX 7 AA7 THR A 191 ARG A 200 1 10 HELIX 8 AA8 GLU A 216 GLU A 223 1 8 HELIX 9 AA9 GLU A 223 ARG A 235 1 13 HELIX 10 AB1 ILE A 254 ARG A 260 1 7 HELIX 11 AB2 ASP A 272 THR A 277 5 6 HELIX 12 AB3 GLU A 289 ARG A 291 5 3 HELIX 13 AB4 GLU A 292 LEU A 304 1 13 HELIX 14 AB5 SER A 315 SER A 329 1 15 HELIX 15 AB6 LYS A 341 ASP A 354 1 14 HELIX 16 AB7 ASP A 364 GLY A 367 5 4 HELIX 17 AB8 GLU A 386 GLY A 395 1 10 HELIX 18 AB9 ARG A 396 ALA A 397 5 2 HELIX 19 AC1 GLY A 398 THR A 402 5 5 HELIX 20 AC2 SER A 412 ASP A 427 1 16 HELIX 21 AC3 PRO A 440 LEU A 444 5 5 HELIX 22 AC4 GLY B 63 LEU B 68 5 6 HELIX 23 AC5 LYS B 70 CYS B 80 1 11 HELIX 24 AC6 SER B 86 HIS B 98 1 13 HELIX 25 AC7 LYS B 112 LEU B 124 1 13 HELIX 26 AC8 ALA B 139 SER B 154 1 16 HELIX 27 AC9 PRO B 170 ASN B 180 1 11 HELIX 28 AD1 THR B 191 GLU B 201 1 11 HELIX 29 AD2 GLU B 216 GLU B 223 1 8 HELIX 30 AD3 GLU B 223 ARG B 235 1 13 HELIX 31 AD4 ILE B 254 ARG B 260 1 7 HELIX 32 AD5 ASP B 272 THR B 277 5 6 HELIX 33 AD6 GLU B 289 ARG B 291 5 3 HELIX 34 AD7 GLU B 292 LEU B 304 1 13 HELIX 35 AD8 SER B 315 SER B 329 1 15 HELIX 36 AD9 LYS B 341 ASP B 354 1 14 HELIX 37 AE1 ASP B 364 GLY B 367 5 4 HELIX 38 AE2 GLU B 386 GLY B 395 1 10 HELIX 39 AE3 SER B 412 PHE B 426 1 15 HELIX 40 AE4 ASP B 439 LEU B 444 5 6 HELIX 41 AE5 PHE C 64 LEU C 68 5 5 HELIX 42 AE6 LYS C 70 CYS C 80 1 11 HELIX 43 AE7 SER C 86 ILE C 97 1 12 HELIX 44 AE8 LYS C 112 LEU C 124 1 13 HELIX 45 AE9 ALA C 139 SER C 154 1 16 HELIX 46 AF1 PRO C 170 ASN C 180 1 11 HELIX 47 AF2 THR C 191 ARG C 200 1 10 HELIX 48 AF3 GLU C 216 GLU C 223 1 8 HELIX 49 AF4 GLU C 223 ARG C 235 1 13 HELIX 50 AF5 ILE C 254 ARG C 260 1 7 HELIX 51 AF6 ASP C 272 THR C 277 5 6 HELIX 52 AF7 GLU C 289 ARG C 291 5 3 HELIX 53 AF8 GLU C 292 LEU C 304 1 13 HELIX 54 AF9 SER C 315 SER C 329 1 15 HELIX 55 AG1 LYS C 341 ASP C 354 1 14 HELIX 56 AG2 ASP C 364 GLY C 367 5 4 HELIX 57 AG3 GLU C 386 GLY C 395 1 10 HELIX 58 AG4 SER C 412 ASP C 427 1 16 HELIX 59 AG5 ASP C 439 LEU C 444 5 6 HELIX 60 AG6 SER G 211 PHE G 223 1 13 HELIX 61 AG7 SER H 211 PHE H 223 1 13 HELIX 62 AG8 SER I 211 GLU I 224 1 14 SHEET 1 AA1 7 THR A 162 PHE A 165 0 SHEET 2 AA1 7 ILE A 187 ALA A 190 1 O VAL A 189 N ALA A 163 SHEET 3 AA1 7 VAL A 133 ILE A 136 1 N VAL A 133 O VAL A 188 SHEET 4 AA1 7 ASN A 211 ASP A 215 1 O ASP A 215 N ILE A 136 SHEET 5 AA1 7 GLN A 242 SER A 247 1 O GLN A 242 N PHE A 212 SHEET 6 AA1 7 VAL A 102 GLN A 105 1 N CYS A 104 O MET A 245 SHEET 7 AA1 7 LEU A 266 ILE A 268 1 O LEU A 266 N LEU A 103 SHEET 1 AA2 7 ALA A 333 VAL A 336 0 SHEET 2 AA2 7 ILE A 359 SER A 362 1 O VAL A 361 N ILE A 334 SHEET 3 AA2 7 GLN A 308 PHE A 312 1 N ILE A 311 O CYS A 360 SHEET 4 AA2 7 ILE A 375 ASN A 380 1 O ILE A 379 N ILE A 310 SHEET 5 AA2 7 GLY A 404 VAL A 410 1 O PHE A 409 N ASN A 380 SHEET 6 AA2 7 LEU A 281 LYS A 287 1 N GLN A 282 O ALA A 406 SHEET 7 AA2 7 ALA A 431 GLU A 432 1 O ALA A 431 N TYR A 285 SHEET 1 AA3 7 THR B 162 PHE B 165 0 SHEET 2 AA3 7 ILE B 187 ALA B 190 1 O VAL B 189 N ALA B 163 SHEET 3 AA3 7 VAL B 133 ILE B 136 1 N VAL B 135 O VAL B 188 SHEET 4 AA3 7 ASN B 211 ASP B 215 1 O VAL B 213 N VAL B 134 SHEET 5 AA3 7 GLN B 242 SER B 247 1 O MET B 244 N PHE B 212 SHEET 6 AA3 7 VAL B 102 GLN B 105 1 N CYS B 104 O MET B 245 SHEET 7 AA3 7 LEU B 266 ILE B 268 1 O LEU B 266 N LEU B 103 SHEET 1 AA4 7 ALA B 333 VAL B 336 0 SHEET 2 AA4 7 ILE B 359 SER B 362 1 O VAL B 361 N ILE B 334 SHEET 3 AA4 7 GLN B 308 PHE B 312 1 N ILE B 311 O CYS B 360 SHEET 4 AA4 7 ILE B 375 ASN B 380 1 O ILE B 379 N PHE B 312 SHEET 5 AA4 7 GLY B 404 VAL B 410 1 O ILE B 407 N ASN B 380 SHEET 6 AA4 7 LEU B 281 LYS B 287 1 N GLN B 282 O ALA B 406 SHEET 7 AA4 7 ALA B 431 GLU B 432 1 O ALA B 431 N TYR B 285 SHEET 1 AA5 7 THR C 162 PHE C 165 0 SHEET 2 AA5 7 ILE C 187 ALA C 190 1 O VAL C 189 N ALA C 163 SHEET 3 AA5 7 VAL C 133 ILE C 136 1 N VAL C 135 O VAL C 188 SHEET 4 AA5 7 ASN C 211 ASP C 215 1 O VAL C 213 N VAL C 134 SHEET 5 AA5 7 GLN C 242 SER C 247 1 O GLN C 242 N PHE C 212 SHEET 6 AA5 7 VAL C 102 GLN C 105 1 N CYS C 104 O MET C 245 SHEET 7 AA5 7 LEU C 266 ILE C 268 1 O LEU C 266 N LEU C 103 SHEET 1 AA6 7 ALA C 333 VAL C 336 0 SHEET 2 AA6 7 ILE C 359 SER C 362 1 O VAL C 361 N ILE C 334 SHEET 3 AA6 7 GLN C 308 PHE C 312 1 N ILE C 311 O CYS C 360 SHEET 4 AA6 7 ILE C 375 ASN C 380 1 O ILE C 379 N PHE C 312 SHEET 5 AA6 7 GLY C 404 VAL C 410 1 O PHE C 409 N ASN C 380 SHEET 6 AA6 7 LEU C 281 LYS C 287 1 N GLN C 282 O ALA C 406 SHEET 7 AA6 7 ALA C 431 GLU C 432 1 O ALA C 431 N TYR C 285 LINK NZ LYS A 413 OE2 GLU A 414 1555 1555 1.41 LINK O2B ADP A1000 BE BEF A1001 1555 1555 1.63 LINK O1B ADP A1000 MG MG A1002 1555 1555 2.12 LINK MG MG A1002 O HOH A1102 1555 1555 2.21 LINK MG MG A1002 O HOH A1104 1555 1555 2.32 LINK MG MG A1002 O HOH A1107 1555 1555 2.11 LINK MG MG A1002 O HOH A1111 1555 1555 2.22 LINK O3B ADP B2000 BE BEF B2001 1555 1555 1.57 LINK O2B ADP B2000 MG MG B2002 1555 1555 2.14 LINK MG MG B2002 O HOH B2101 1555 1555 2.12 LINK MG MG B2002 O HOH B2103 1555 1555 2.07 LINK MG MG B2002 O HOH B2106 1555 1555 2.01 LINK MG MG B2002 O HOH B2108 1555 1555 2.21 LINK O2B ADP C3000 BE BEF C3001 1555 1555 1.60 LINK O1B ADP C3000 MG MG C3002 1555 1555 2.02 LINK MG MG C3002 O HOH C3101 1555 1555 2.34 LINK MG MG C3002 O HOH C3102 1555 1555 2.21 LINK MG MG C3002 O HOH C3104 1555 1555 2.07 LINK MG MG C3002 O HOH C3105 1555 1555 2.09 SITE 1 AC1 6 ADP A1000 BEF A1001 HOH A1102 HOH A1104 SITE 2 AC1 6 HOH A1107 HOH A1111 SITE 1 AC2 6 ADP B2000 BEF B2001 HOH B2101 HOH B2103 SITE 2 AC2 6 HOH B2106 HOH B2108 SITE 1 AC3 7 ASP C 215 ADP C3000 BEF C3001 HOH C3101 SITE 2 AC3 7 HOH C3102 HOH C3104 HOH C3105 CRYST1 99.346 99.346 247.469 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010066 0.005812 0.000000 0.00000 SCALE2 0.000000 0.011623 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004041 0.00000