HEADER DE NOVO PROTEIN 03-AUG-16 5SUT TITLE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF A COVALENT TRIMER DERIVED FROM A- TITLE 2 BETA 17_36. SYNCHROTRON DATA SET. (ORN)CVFFCED(ORN)AII(SAR)L(ORN)V. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 16MER A-BETA PEPTIDE: ORN-CYS-VAL-PHE-PHE-CYS-GLU-ASP-ORN- COMPND 3 ALA-ILE-ILE-SAR-LEU-ORN-VAL; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 OTHER_DETAILS: 16MER PEPTIDE DERIVED FROM A-BETA 17-36 KEYWDS AMYLOID, OLIGOMER, ALZHEIMER'S, TRIMER, PROTEIN FIBRIL, DE NOVO KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.G.KREUTZER,R.K.SPENCER,J.S.NOWICK REVDAT 5 27-MAR-24 5SUT 1 JRNL REVDAT 4 04-OCT-23 5SUT 1 LINK REVDAT 3 25-DEC-19 5SUT 1 REMARK REVDAT 2 13-SEP-17 5SUT 1 REMARK REVDAT 1 11-JAN-17 5SUT 0 JRNL AUTH A.G.KREUTZER,S.YOO,R.K.SPENCER,J.S.NOWICK JRNL TITL STABILIZATION, ASSEMBLY, AND TOXICITY OF TRIMERS DERIVED JRNL TITL 2 FROM A BETA. JRNL REF J.AM.CHEM.SOC. V. 139 966 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28001392 JRNL DOI 10.1021/JACS.6B11748 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 2514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 259 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6995 - 2.3957 0.99 1151 127 0.2188 0.2252 REMARK 3 2 2.3957 - 1.9015 1.00 1104 132 0.1772 0.2271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 252 REMARK 3 ANGLE : 1.370 332 REMARK 3 CHIRALITY : 0.050 40 REMARK 3 PLANARITY : 0.008 42 REMARK 3 DIHEDRAL : 33.895 124 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5SUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.83, 1.17 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2514 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 35.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.02326 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 46.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.06939 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5SUU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES BUFFER AT PH 7.3, 34% REMARK 280 JEFFAMINE M-600, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 24.79500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 14.31540 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 21.39500 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 24.79500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 14.31540 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 21.39500 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 24.79500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 14.31540 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 21.39500 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 24.79500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 14.31540 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 21.39500 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 24.79500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 14.31540 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 21.39500 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 24.79500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 14.31540 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.39500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 28.63080 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 42.79000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 28.63080 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 42.79000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 28.63080 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 42.79000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 28.63080 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 42.79000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 28.63080 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 42.79000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 28.63080 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 42.79000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 74.38500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 42.94620 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 85.89240 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 99.18000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 85.89240 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -24.79500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 128.83860 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 74.38500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 42.94620 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 85.89240 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -28.63080 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 21.39500 REMARK 350 BIOMT1 5 -0.500000 -0.866025 0.000000 99.18000 REMARK 350 BIOMT2 5 0.866025 -0.500000 0.000000 57.26160 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 21.39500 REMARK 350 BIOMT1 6 -0.500000 0.866025 0.000000 -24.79500 REMARK 350 BIOMT2 6 -0.866025 -0.500000 0.000000 100.20780 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 21.39500 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 202 O HOH A 202 2765 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5SUR RELATED DB: PDB REMARK 900 RELATED ID: 5SUS RELATED DB: PDB REMARK 900 RELATED ID: 5SUU RELATED DB: PDB DBREF 5SUT A 1 16 PDB 5SUT 5SUT 1 16 DBREF 5SUT B 1 16 PDB 5SUT 5SUT 1 16 SEQRES 1 A 16 ORN CYS VAL PHE PHE CYS GLU ASP ORN ALA ILE ILE SAR SEQRES 2 A 16 LEU ORN VAL SEQRES 1 B 16 ORN CYS VAL PHE PHE CYS GLU ASP ORN ALA ILE ILE SAR SEQRES 2 B 16 LEU ORN VAL HET ORN A 1 19 HET ORN A 9 19 HET SAR A 13 10 HET ORN A 15 19 HET ORN B 1 19 HET ORN B 9 19 HET SAR B 13 10 HET ORN B 15 19 HET CL A 101 1 HETNAM ORN L-ORNITHINE HETNAM SAR SARCOSINE HETNAM CL CHLORIDE ION FORMUL 1 ORN 6(C5 H12 N2 O2) FORMUL 1 SAR 2(C3 H7 N O2) FORMUL 3 CL CL 1- FORMUL 4 HOH *12(H2 O) SHEET 1 AA1 2 CYS A 2 GLU A 7 0 SHEET 2 AA1 2 ILE A 11 VAL A 16 -1 O ILE A 12 N CYS A 6 SHEET 1 AA2 2 CYS B 2 GLU B 7 0 SHEET 2 AA2 2 ILE B 11 VAL B 16 -1 O LEU B 14 N PHE B 4 SSBOND 1 CYS A 2 CYS A 6 1555 3675 2.04 SSBOND 2 CYS B 2 CYS B 6 1555 2875 2.04 LINK C ORN A 1 N CYS A 2 1555 1555 1.37 LINK NE ORN A 1 C VAL A 16 1555 1555 1.38 LINK C ASP A 8 NE ORN A 9 1555 1555 1.37 LINK C ORN A 9 N ALA A 10 1555 1555 1.36 LINK C ILE A 12 N SAR A 13 1555 1555 1.33 LINK C SAR A 13 N LEU A 14 1555 1555 1.34 LINK C LEU A 14 N ORN A 15 1555 1555 1.34 LINK C ORN A 15 N VAL A 16 1555 1555 1.32 LINK C ORN B 1 N CYS B 2 1555 1555 1.37 LINK NE ORN B 1 C VAL B 16 1555 1555 1.38 LINK C ASP B 8 NE ORN B 9 1555 1555 1.37 LINK C ORN B 9 N ALA B 10 1555 1555 1.37 LINK C ILE B 12 N SAR B 13 1555 1555 1.34 LINK C SAR B 13 N LEU B 14 1555 1555 1.33 LINK C LEU B 14 N ORN B 15 1555 1555 1.34 LINK C ORN B 15 N VAL B 16 1555 1555 1.32 SITE 1 AC1 1 HOH A 208 CRYST1 49.590 49.590 64.185 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020165 0.011642 0.000000 0.00000 SCALE2 0.000000 0.023285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015580 0.00000 HETATM 1 N ORN A 1 37.770 48.592 12.580 1.00 41.12 N HETATM 2 CA ORN A 1 36.393 48.051 12.594 1.00 28.36 C HETATM 3 CB ORN A 1 35.508 48.994 13.341 1.00 30.11 C HETATM 4 CG ORN A 1 35.725 48.922 14.866 1.00 32.27 C HETATM 5 CD ORN A 1 34.878 47.870 15.515 1.00 28.44 C HETATM 6 NE ORN A 1 33.461 48.159 15.374 1.00 28.98 N HETATM 7 C ORN A 1 35.903 47.848 11.149 1.00 28.00 C HETATM 8 O ORN A 1 36.680 47.929 10.196 1.00 28.38 O HETATM 9 H2 ORN A 1 38.246 48.514 13.482 1.00 49.34 H HETATM 10 H ORN A 1 38.382 48.123 11.907 1.00 49.34 H HETATM 11 H3 ORN A 1 37.812 49.585 12.336 1.00 49.34 H HETATM 12 HA ORN A 1 36.456 47.066 13.067 1.00 34.03 H HETATM 13 HB2 ORN A 1 35.680 50.025 13.004 1.00 36.13 H HETATM 14 HB3 ORN A 1 34.467 48.697 13.151 1.00 36.13 H HETATM 15 HG2 ORN A 1 35.474 49.895 15.305 1.00 38.73 H HETATM 16 HG3 ORN A 1 36.781 48.707 15.066 1.00 38.73 H HETATM 17 HD2 ORN A 1 35.118 47.842 16.582 1.00 34.13 H HETATM 18 HD3 ORN A 1 35.092 46.906 15.046 1.00 34.13 H HETATM 19 HE1 ORN A 1 33.059 48.787 16.067 1.00 34.77 H